PTRD1_HUMAN Blast Output
Viruses
1|Sequence|1|10|MHRGVGPAFR

>sp|LTP_EHV1B|LARGE tegument protein deneddylase|Equine herpesvirus 1 (strain Ab4p)

Query: 4 GVGPAF 9
GVGPAF
Sbjct: 1029 GVGPAF 1034


>sp|RDRP_RBDVR|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Raspberry bushy dwarf virus (isolate

Query: 2 HRGVGPAFR 10
H G+GP F+
Sbjct: 618 HAGLGPDFK 626


>sp|V026_FOWPN|PUTATIVE ankyrin repeat protein FPV026|Fowlpox virus (strain NVSL) (FPV)

Query: 1 MHRGVGPAF 9
+HRG P F
Sbjct: 255 LHRGANPFF 263


>sp|VF415_IIV3|UNCHARACTERIZED protein 018L|Invertebrate iridescent virus 3 (IIV-3)

Query: 2 HRGVGPA 8
HR +GPA
Sbjct: 28 HRTIGPA 34




2|Sequence|6|15|GPAFRVVRKM

>sp|Y098A_ATV|UNCHARACTERIZED protein ORF98a|Acidianus two-tailed virus (ATV)

Query: 3 AFRVVRKM 10
AFR+++KM
Sbjct: 67 AFRIIKKM 74


>sp|RDRP_CFMVN|REPLICASE polyprotein P2AB|Cocksfoot mottle virus (isolate Dactylis

Query: 3 AFRVVRK 9
AFRVVRK
Sbjct: 308 AFRVVRK 314


>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1 GPAFRVVR 8
PA+RVVR
Sbjct: 1328 APAYRVVR 1335


>sp|YR896_MIMIV|PUTATIVE ankyrin repeat protein R896|Acanthamoeba polyphaga mimivirus

Query: 1 GPAFRVVRK 9
GP F++ RK
Sbjct: 46 GPLFKITRK 54


>sp|P2A_CFMVN|POLYPROTEIN P2A|Cocksfoot mottle virus (isolate Dactylis

Query: 3 AFRVVRK 9
AFRVVRK
Sbjct: 308 AFRVVRK 314


>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)

Query: 1 GPAFRVVR 8
PA+RV+R
Sbjct: 1328 APAYRVIR 1335


>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1 GPAFRVVR 8
PA+RV+R
Sbjct: 1328 APAYRVIR 1335


>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1 GPAFRVVR 8
PA+RV+R
Sbjct: 1328 APAYRVIR 1335




3|Sequence|11|20|VVRKMAASGA

***** No hits found ******


4|Sequence|16|25|AASGAEPQVL

***** No hits found ******


5|Sequence|21|30|EPQVLVQYLV

>sp|1A_TOBSV|REPLICATION protein 1a|Tobacco streak virus (strain WC)

Query: 1 EPQVLVQYL 9
+P+ LVQY+
Sbjct: 384 DPETLVQYI 392


>sp|TCB_FLV|VIRAL T-cell receptor beta chain-like|Feline leukemia virus

Query: 2 PQVLVQY 8
PQ+L+QY
Sbjct: 71 PQLLIQY 77


>sp|YR691_MIMIV|UNCHARACTERIZED protein R691|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 PQVLVQY 8
P++LVQY
Sbjct: 265 PKILVQY 271




6|Sequence|26|35|VQYLVLRKDL

>sp|MATRX_HRSVB|MATRIX protein|Human respiratory syncytial virus B

Query: 1 VQYLVLRKD 9
VQY VL KD
Sbjct: 18 VQYNVLEKD 26


>sp|MATRX_HRSVA|MATRIX protein|Human respiratory syncytial virus A

Query: 1 VQYLVLRKD 9
VQY VL KD
Sbjct: 18 VQYNVLEKD 26


>sp|MATRX_HRSS2|MATRIX protein|Human respiratory syncytial virus A

Query: 1 VQYLVLRKD 9
VQY VL KD
Sbjct: 18 VQYNVLEKD 26


>sp|MATRX_HRSV|MATRIX protein|Human respiratory syncytial virus

Query: 1 VQYLVLRKD 9
VQY VL KD
Sbjct: 18 VQYNVLEKD 26


>sp|MATRX_ORSVW|MATRIX protein|Ovine respiratory syncytial virus (strain

Query: 1 VQYLVLRKD 9
VQY VL KD
Sbjct: 18 VQYNVLEKD 26




7|Sequence|31|40|LRKDLSQAPF

>sp|POLG_TUMVJ|GENOME polyprotein|Turnip mosaic virus (strain Japanese)

Query: 1 LRKDLSQAPF 10
+ K LSQAPF
Sbjct: 1346 VHKQLSQAPF 1355


>sp|POLG_TUMVQ|GENOME polyprotein|Turnip mosaic virus (strain Quebec)

Query: 1 LRKDLSQAPF 10
+ K LSQAPF
Sbjct: 1346 VHKQLSQAPF 1355




8|Sequence|36|45|SQAPFSWPAG

>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 APFSWPAG 10
AP +WPAG
Sbjct: 875 APMTWPAG 882


>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 APFSWPAG 10
AP +WPAG
Sbjct: 875 APMTWPAG 882


>sp|TRX2_ELHVK|TRIPLEX capsid protein 2|Elephantid herpesvirus 1 (isolate Asian

Query: 3 APFSWPAG 10
PFSW G
Sbjct: 94 GPFSWEVG 101


>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 4 PFSWP 8
PF+WP
Sbjct: 2419 PFTWP 2423


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 4 PFSWPA 9
PF WPA
Sbjct: 826 PFLWPA 831


>sp|R1A_BEV|REPLICASE polyprotein 1a|Berne virus (BEV)

Query: 4 PFSWP 8
PF+WP
Sbjct: 2419 PFTWP 2423


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1 SQAPFSWP 8
S +P+SWP
Sbjct: 2279 SASPWSWP 2286


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 1 SQAPFSWP 8
S +P+SWP
Sbjct: 2279 SASPWSWP 2286


>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)

Query: 4 PFSWPA 9
PF WPA
Sbjct: 826 PFLWPA 831


>sp|RPB1_FRG3G|PUTATIVE DNA-directed RNA polymerase 008R|Frog virus 3 (isolate Goorha)

Query: 4 PFSWP 8
PFSWP
Sbjct: 413 PFSWP 417


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 1 SQAPFSWP 8
S +P+SWP
Sbjct: 2279 SASPWSWP 2286


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 1 SQAPFSWP 8
S +P+SWP
Sbjct: 2279 SASPWSWP 2286


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1 SQAPFSWP 8
S +P+SWP
Sbjct: 2279 SASPWSWP 2286


>sp|VU3_HHV6Z|PROTEIN U3|Human herpesvirus 6B (strain Z29)

Query: 4 PFSWPAG 10
P +WP G
Sbjct: 89 PLAWPEG 95


>sp|VU3_HHV6U|PROTEIN U3|Human herpesvirus 6A (strain Uganda-1102)

Query: 4 PFSWPAG 10
P +WP G
Sbjct: 76 PLAWPEG 82


>sp|MVP_POLVP|MOVEMENT protein|Pothos latent virus (isolate Pigeonpea/India)

Query: 1 SQAPFSWPAG 10
SQ PF P G
Sbjct: 107 SQLPFCLPVG 116


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 3 APFSWP 8
+P+SWP
Sbjct: 2281 SPWSWP 2286


>sp|RDRP_MRNV|RNA-DIRECTED RNA polymerase|Macrobrachium rosenbergii nodavirus (MrNV)

Query: 1 SQAPFSWP 8
SQ P WP
Sbjct: 406 SQPPVHWP 413


>sp|GD_EHV1A|ENVELOPE glycoprotein D|Equine herpesvirus 1 (strain AB1)

Query: 4 PFSWPA 9
PF WP+
Sbjct: 313 PFKWPS 318




9|Sequence|41|50|SWPAGALVAQ

>sp|YPE6_NPVLD|UNCHARACTERIZED 33.9 kDa protein in|Lymantria dispar multicapsid nuclear

Query: 2 WPAGA 6
WPAGA
Sbjct: 239 WPAGA 243


>sp|NRAM_I79A7|NEURAMINIDASE A virus (strain A/Grey

Query: 1 SWPAGALV 8
SWP GAL+
Sbjct: 457 SWPDGALL 464


>sp|L_SENDZ|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Z) (SeV)

Query: 1 SWPAGALVAQ 10
SW AL+AQ
Sbjct: 1257 SWMEAALIAQ 1266


>sp|L_SENDO|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Ohita) (SeV)

Query: 1 SWPAGALVAQ 10
SW AL+AQ
Sbjct: 1257 SWMEAALIAQ 1266


>sp|L_SENDF|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Fushimi) (SeV)

Query: 1 SWPAGALVAQ 10
SW AL+AQ
Sbjct: 1257 SWMEAALIAQ 1266


>sp|L_SENDE|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Enders) (SeV)

Query: 1 SWPAGALVAQ 10
SW AL+AQ
Sbjct: 1257 SWMEAALIAQ 1266


>sp|L_SENDA|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Hamamatsu) (SeV)

Query: 1 SWPAGALVAQ 10
SW AL+AQ
Sbjct: 1257 SWMEAALIAQ 1266


>sp|NRAM_I68A3|NEURAMINIDASE A virus (strain A/Turkey/Ontario/6118/1968

Query: 1 SWPAGALV 8
SWP GAL+
Sbjct: 457 SWPDGALL 464


>sp|CAPSD_PVMR|CAPSID protein|Potato virus M (strain Russian)

Query: 2 WPAGALVA 9
WP GA+ A
Sbjct: 171 WPRGAITA 178


>sp|CAPSD_PVMG|CAPSID protein|Potato virus M (strain German)

Query: 2 WPAGALVA 9
WP GA+ A
Sbjct: 171 WPRGAITA 178


>sp|ENV_SFVCP|ENVELOPE glycoprotein gp130|Simian foamy virus (isolate chimpanzee)

Query: 1 SWPAGALVA 9
SWP L+A
Sbjct: 245 SWPTEGLIA 253




10|Sequence|46|55|ALVAQACHAA

>sp|V029_FOWPN|PUTATIVE peptidyl-tRNA hydrolase|Fowlpox virus (strain NVSL) (FPV)

Query: 2 LVAQACHAA 10
+V+Q CH A
Sbjct: 31 IVSQCCHGA 39


>sp|NCAP_I97A1|NUCLEOPROTEIN A virus (strain A/Hong

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I96A0|NUCLEOPROTEIN A virus (strain A/Goose/Guangdong/1/1996

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I93A0|NUCLEOPROTEIN A virus (strain A/Kitakyushu/159/1993

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I90A0|NUCLEOPROTEIN A virus (strain A/Shanghai/6/1990

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I89A7|NUCLEOPROTEIN A virus (strain A/Equine/Jillin/1/1989

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I89A6|NUCLEOPROTEIN A virus (strain A/Swine/Italy/839/1989

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I89A4|NUCLEOPROTEIN A virus (strain A/Shanghai/16/1989

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I89A3|NUCLEOPROTEIN A virus (strain A/Guangdong/39/1989

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I89A2|NUCLEOPROTEIN A virus (strain A/Beijing/353/1989

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I89A1|NUCLEOPROTEIN A virus (strain A/Beijing/352/1989

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I89A0|NUCLEOPROTEIN A virus (strain A/Beijing/337/1989

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I88A7|NUCLEOPROTEIN A virus (strain A/Wisconsin/3523/1988

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I88A5|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/17672/1988

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I88A3|NUCLEOPROTEIN A virus (strain A/Memphis/8/1988

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I88A2|NUCLEOPROTEIN A virus (strain A/Memphis/3/1988

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I87A2|NUCLEOPROTEIN A virus (strain A/Guangdong/9/1987

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I87A0|NUCLEOPROTEIN A virus (strain A/Shanghai/11/1987

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I86A3|NUCLEOPROTEIN A virus (strain A/Equine/Tennessee/5/1986

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I86A2|NUCLEOPROTEIN A virus (strain A/Equine/Kentucky/2/1986

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I86A1|NUCLEOPROTEIN A virus (strain A/Memphis/6/1986

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I85A7|NUCLEOPROTEIN A virus (strain A/Ruddy

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I85A5|NUCLEOPROTEIN A virus (strain A/Equine/Santiago/1/1985

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I85A4|NUCLEOPROTEIN A virus (strain A/Swine/Netherlands/12/1985

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I85A0|NUCLEOPROTEIN A virus (strain A/Memphis/14/1985

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I84A4|NUCLEOPROTEIN A virus (strain A/Gull/Astrakhan/227/1984

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I84A2|NUCLEOPROTEIN A virus (strain A/Whale/Maine/328/1984

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I83A8|NUCLEOPROTEIN A virus (strain A/Hong

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I83A5|NUCLEOPROTEIN A virus (strain A/Chicken/Pennsylvania/1/1983

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I83A4|NUCLEOPROTEIN A virus (strain A/Turkey/Ireland/1378/1983

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I83A0|NUCLEOPROTEIN A virus (strain A/Swine/Dandong/9/1983

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I82A7|NUCLEOPROTEIN A virus (strain A/Swine/Hong

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I82A4|NUCLEOPROTEIN A virus (strain A/Swine/Hong

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I82A1|NUCLEOPROTEIN A virus (strain A/Mallard/Astrakhan/263/1982

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I82A0|NUCLEOPROTEIN A virus (strain A/Mallard/Astrakhan/244/1982

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I81A4|NUCLEOPROTEIN A virus (strain A/Swine/Ontario/2/1981

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I81A3|NUCLEOPROTEIN A virus (strain A/Turkey/Minnesota/1661/1981

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I81A1|NUCLEOPROTEIN A virus (strain A/Swine/Italy/141/1981

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I81A0|NUCLEOPROTEIN A virus (strain A/Swine/Germany/2/1981

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I80AD|NUCLEOPROTEIN A virus (strain A/Gull/Minnesota/945/1980

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I80AC|NUCLEOPROTEIN A virus (strain A/Gull/Massachusetts/26/1980

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I80A8|NUCLEOPROTEIN A virus (strain A/Turkey/Minnesota/833/1980

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I80A6|NUCLEOPROTEIN A virus (strain A/Duck/Hokkaido/8/1980

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I80A5|NUCLEOPROTEIN A virus (strain A/Teal/Iceland/29/1980

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I80A4|NUCLEOPROTEIN A virus (strain A/Memphis/4/1980

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I80A3|NUCLEOPROTEIN A virus (strain A/Memphis/5/1980

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I80A2|NUCLEOPROTEIN A virus (strain A/Seal/Massachusetts/1/1980

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I80A1|NUCLEOPROTEIN A virus (strain A/Duck/Australia/749/1980

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I80A0|NUCLEOPROTEIN A virus (strain A/Shanghai/31/1980

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I79A8|NUCLEOPROTEIN A virus (strain A/Gull/Maryland/1815/1979

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I79A7|NUCLEOPROTEIN A virus (strain A/Grey

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I79A5|NUCLEOPROTEIN A virus (strain A/Swine/Italy/2/1979

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I79A4|NUCLEOPROTEIN A virus (strain A/Kiev/59/1979

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I78AF|NUCLEOPROTEIN A virus (strain A/Gull/Maryland/1824/1978

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I78A8|NUCLEOPROTEIN A virus (strain A/Memphis/18/1978

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I78A7|NUCLEOPROTEIN A virus (strain A/Memphis/2/1978

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I78A6|NUCLEOPROTEIN A virus (strain A/California/10/1978

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I78A5|NUCLEOPROTEIN A virus (strain A/Duck/Beijing/1/1978

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I77AH|NUCLEOPROTEIN A virus (strain A/Texas/1/1977

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I77AG|NUCLEOPROTEIN A virus (strain A/Budgerigar/Hokkaido/1/1977

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I77AF|NUCLEOPROTEIN A virus (strain A/Gull/Maryland/704/1977

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I77AE|NUCLEOPROTEIN A virus (strain A/Gull/Maryland/5/1977

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I77AC|NUCLEOPROTEIN A virus (strain A/Swine/Tennessee/24/1977

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I77A5|NUCLEOPROTEIN A virus (strain A/Guangdong/38/1977

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I77A4|NUCLEOPROTEIN A virus (strain A/Swine/Colorado/1/1977

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I77A3|NUCLEOPROTEIN A virus (strain A/Duck/Bavaria/2/1977

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I76AK|NUCLEOPROTEIN A virus (strain A/Duck/New

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I76AG|NUCLEOPROTEIN A virus (strain A/Swine/Italy/437/1976

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I76AF|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1976/1931

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I76AE|NUCLEOPROTEIN A virus (strain A/Whale/Pacific

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I76A7|NUCLEOPROTEIN A virus (strain A/New

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I76A6|NUCLEOPROTEIN A virus (strain A/Memphis/110/1976

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I76A0|NUCLEOPROTEIN A virus (strain A/Anas

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I75A2|NUCLEOPROTEIN A virus (strain A/Duck/Hong

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I75A0|NUCLEOPROTEIN A virus (strain A/Beijing/39/1975

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I74A2|NUCLEOPROTEIN A virus (strain A/Duck/Memphis/928/1974

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I73A4|NUCLEOPROTEIN A virus (strain A/Equine/London/1416/1973

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I73A0|NUCLEOPROTEIN A virus (strain A/Parrot/Ulster/1973

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I72A6|NUCLEOPROTEIN A virus (strain A/Tern/Turkmenia/18/1972

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I72A5|NUCLEOPROTEIN A virus (strain A/Shearwater/Australia/1972

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I69A1|NUCLEOPROTEIN A virus (strain A/Duck/Pennsylvania/1/1969

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I68A3|NUCLEOPROTEIN A virus (strain A/Turkey/Ontario/6118/1968

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I67A2|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1967

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I66A1|NUCLEOPROTEIN A virus (strain A/Turkey/Wisconsin/1/1966

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I66A0|NUCLEOPROTEIN A virus (strain A/Turkey/Ontario/7732/1966

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I63A2|NUCLEOPROTEIN A virus (strain A/Equine/Miami/1/1963

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I62A0|NUCLEOPROTEIN A virus (strain A/Duck/England/1/1962

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I61A1|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1961

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I61A0|NUCLEOPROTEIN A virus (strain A/Tern/South

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I60A2|NUCLEOPROTEIN A virus (strain A/Duck/Ukraine/2/1960

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I59A0|NUCLEOPROTEIN A virus (strain A/Chicken/Scotland/1959

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I57A7|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1957

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I56A3|NUCLEOPROTEIN A virus (strain A/Equine/Prague/1/1956

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I56A2|NUCLEOPROTEIN A virus (strain A/Duck/England/1/1956

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I56A1|NUCLEOPROTEIN A virus (strain A/Duck/Czechoslovakia/1956

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I54A1|NUCLEOPROTEIN A virus (strain A/Swine/May/1954

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I54A0|NUCLEOPROTEIN A virus (strain A/Leningrad/1/1954

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I53A0|NUCLEOPROTEIN A virus (strain A/Duck/Manitoba/1/1953

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I49A2|NUCLEOPROTEIN A virus (strain A/Swine/41/1949

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I49A1|NUCLEOPROTEIN A virus (strain A/Duck/Germany/1949

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I49A0|NUCLEOPROTEIN A virus (strain A/Chicken/Germany/n/1949

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I46A1|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1946

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I45A0|NUCLEOPROTEIN A virus (strain A/USA:Huston/AA/1945

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I43A0|NUCLEOPROTEIN A virus (strain A/USA:Iowa/1943

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I42A0|NUCLEOPROTEIN A virus (strain A/Swine/Jamesburg/1942

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I37A0|NUCLEOPROTEIN A virus (strain A/Swine/29/1937

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I36A0|NUCLEOPROTEIN A virus (strain A/Henry/1936

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I35A3|NUCLEOPROTEIN A virus (strain A/USA:Phila/1935

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I35A2|NUCLEOPROTEIN A virus (strain A/Swine/Ohio/23/1935

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I35A1|NUCLEOPROTEIN A virus (strain A/Swine/Cambridge/1/1935

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I34A1|NUCLEOPROTEIN A virus (strain A/Puerto

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I34A0|NUCLEOPROTEIN A virus (strain A/Fowl

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I33A0|NUCLEOPROTEIN A virus (strain A/Wilson-Smith/1933

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I30A0|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/15/1930

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I27A0|NUCLEOPROTEIN A virus (strain A/Fowl

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I18A0|NUCLEOPROTEIN A virus (strain A/Brevig

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I06A0|NUCLEOPROTEIN A virus (strain A/Russia:St.Petersburg/8/2006

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I05A1|NUCLEOPROTEIN A virus (strain A/Goose/Guangxi/345/2005

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I03A1|NUCLEOPROTEIN A virus (strain A/Chicken/Shantou/4231/2003

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I03A0|NUCLEOPROTEIN A virus (strain A/Hong

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I02A7|NUCLEOPROTEIN A virus (strain A/Teal/China/2978.1/2002

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I02A6|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I02A5|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I02A4|NUCLEOPROTEIN A virus (strain A/Silky

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I02A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I02A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I02A1|NUCLEOPROTEIN A virus (strain A/Guinea

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I01A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I01A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I01A1|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I01A0|NUCLEOPROTEIN A virus (strain A/Silky

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336


>sp|NCAP_I00A0|NUCLEOPROTEIN A virus (strain A/Duck/Hong

Query: 2 LVAQACHAA 10
LV ACH+A
Sbjct: 328 LVWMACHSA 336




11|Sequence|51|60|ACHAATAALH

>sp|VP5_RRSVT|PUTATIVE minor structural protein VP5|Rice ragged stunt virus (isolate

Query: 2 CHAATAAL 9
CHA AAL
Sbjct: 260 CHATDAAL 267




12|Sequence|56|65|TAALHTHRDH

>sp|PKG1_ADEB3|PACKAGING protein 1|Bovine adenovirus B serotype 3

Query: 1 TAALHTHRD 9
+AALH HRD
Sbjct: 27 SAALHGHRD 35


>sp|VF113_ASFP4|EARLY transcription factor large subunit|African swine fever virus

Query: 5 HTHRDH 10
HTH DH
Sbjct: 586 HTHSDH 591


>sp|ETFS_ASFWA|EARLY transcription factor large subunit|African swine fever virus

Query: 5 HTHRDH 10
HTH DH
Sbjct: 586 HTHSDH 591


>sp|ETFS_ASFM2|EARLY transcription factor large subunit|African swine fever virus

Query: 5 HTHRDH 10
HTH DH
Sbjct: 551 HTHSDH 556


>sp|ETFS_ASFB7|EARLY transcription factor large subunit|African swine fever virus

Query: 5 HTHRDH 10
HTH DH
Sbjct: 586 HTHSDH 591


>sp|YO35_BPHC1|UNCHARACTERIZED 58.7 kDa protein in|Haemophilus phage HP1 (strain HP1c1)

Query: 1 TAALHTHR 8
T A HTHR
Sbjct: 496 TLATHTHR 503


>sp|VNS1_BTV2A|NON-STRUCTURAL protein NS1|Bluetongue virus 2 (isolate USA)

Query: 1 TAALHTHR 8
T A+H HR
Sbjct: 413 TTAIHIHR 420


>sp|VNS1_BTV20|NON-STRUCTURAL protein NS1|Bluetongue virus 20 (isolate Australia)

Query: 1 TAALHTHR 8
T A+H HR
Sbjct: 413 TTAIHIHR 420


>sp|VNS1_BTV1S|NON-STRUCTURAL protein NS1|Bluetongue virus 1 (isolate South

Query: 1 TAALHTHR 8
T A+H HR
Sbjct: 413 TTAIHIHR 420


>sp|VNS1_BTV1A|NON-STRUCTURAL protein NS1|Bluetongue virus 1 (isolate Australia)

Query: 1 TAALHTHR 8
T A+H HR
Sbjct: 413 TTAIHIHR 420


>sp|VNS1_BTV17|NON-STRUCTURAL protein NS1|Bluetongue virus 17 (isolate USA)

Query: 1 TAALHTHR 8
T A+H HR
Sbjct: 413 TTAIHIHR 420


>sp|VNS1_BTV13|NON-STRUCTURAL protein NS1|Bluetongue virus 13 (isolate USA)

Query: 1 TAALHTHR 8
T A+H HR
Sbjct: 413 TTAIHIHR 420


>sp|VNS1_BTV11|NON-STRUCTURAL protein NS1|Bluetongue virus 11 (isolate USA)

Query: 1 TAALHTHR 8
T A+H HR
Sbjct: 413 TTAIHIHR 420


>sp|VPAP_HHV7J|DNA polymerase processivity factor|Human herpesvirus 7 (strain JI)

Query: 5 HTHRDH 10
H+HRDH
Sbjct: 9 HSHRDH 14


>sp|RDRP_GLVWB|PROBABLE RNA-directed RNA polymerase|Giardia lamblia virus (isolate Wang)

Query: 4 LHTHRDH 10
L+TH DH
Sbjct: 41 LNTHNDH 47


>sp|ACPY1_BPGO7|ANTI-PYCSAR protein Apyc1|Bacillus phage vB_BveM-Goe7

Query: 5 HTHRDH 10
HTH DH
Sbjct: 64 HTHADH 69


>sp|ACPY1_BPGO3|ANTI-PYCSAR protein Apyc1|Bacillus phage vB_BsuM-Goe3

Query: 5 HTHRDH 10
HTH DH
Sbjct: 64 HTHADH 69


>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 1 TAALHTHRDH 10
T LH H DH
Sbjct: 602 TLILHLHPDH 611


>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)

Query: 1 TAALHTHRDH 10
T LH H DH
Sbjct: 601 TLILHLHPDH 610




13|Sequence|61|70|THRDHPHTAA

>sp|L_IHNVW|RNA-DIRECTED RNA polymerase L|Infectious hematopoietic necrosis virus (strain

Query: 2 HRDHPH 7
HRDH H
Sbjct: 1885 HRDHAH 1890


>sp|L_IHNVO|RNA-DIRECTED RNA polymerase L|Infectious hematopoietic necrosis virus (strain

Query: 2 HRDHPH 7
HRDH H
Sbjct: 1885 HRDHAH 1890


>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959

Query: 2 HRDHPHT 8
H HPHT
Sbjct: 308 HNIHPHT 314


>sp|VPK_HHV8P|VIRAL protein kinase|Human herpesvirus 8 type P

Query: 2 HRDHPHT 8
H HPHT
Sbjct: 433 HGGHPHT 439


>sp|049R_IIV3|UNCHARACTERIZED protein 049R|Invertebrate iridescent virus 3 (IIV-3)

Query: 3 RDHPHT 8
RD+PHT
Sbjct: 537 RDNPHT 542


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 1 THRDHP 6
THR HP
Sbjct: 2225 THRPHP 2230


>sp|RDRP_SCPMV|REPLICASE polyprotein P2AB|Southern cowpea mosaic virus (SCPMV)

Query: 2 HRDHPHTA 9
+ D PHTA
Sbjct: 184 YNDKPHTA 191


>sp|CAPSD_AQRVG|INNER capsid protein VP3|Aquareovirus G (isolate American grass

Query: 1 THRDHPHT 8
+HRD P T
Sbjct: 140 SHRDEPST 147




14|Sequence|66|75|PHTAAYLQEL

>sp|LTP_MUHVK|LARGE tegument protein deneddylase|Murid herpesvirus 1 (strain K181)

Query: 1 PHTAAY 6
PHTAAY
Sbjct: 1113 PHTAAY 1118


>sp|001R_FRG3G|PUTATIVE transcription factor 001R|Frog virus 3 (isolate Goorha)

Query: 2 HTAAYLQEL 10
H AA+L+EL
Sbjct: 146 HVAAFLKEL 154


>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean

Query: 2 HTAAYLQ 8
H AAYLQ
Sbjct: 1249 HPAAYLQ 1255




15|Sequence|71|80|YLQELGRMRK

>sp|HEMA_I80AB|HEMAGGLUTININ A virus (strain A/Equine/Romania/1980

Query: 1 YLQELGRM 8
Y+QELGR+
Sbjct: 210 YVQELGRV 217


>sp|HEMA_I76A8|HEMAGGLUTININ A virus (strain A/Equine/Fontainebleau/1976

Query: 1 YLQELGRM 8
Y+QELGR+
Sbjct: 210 YVQELGRV 217




16|Sequence|76|85|GRMRKVVLEA

***** No hits found ******


17|Sequence|81|90|VVLEAPDETT

>sp|LTP_PSHV1|LARGE tegument protein deneddylase|Psittacid herpesvirus 1 (isolate

Query: 1 VVLEAPDETT 10
V+E PDETT
Sbjct: 577 AVVERPDETT 586


>sp|POLN_AHEV|NON-STRUCTURAL polyprotein pORF1|Avian hepatitis E virus (isolate

Query: 2 VLEAPDET 9
VL APD+T
Sbjct: 1060 VLRAPDDT 1067




18|Sequence|86|95|PDETTLKELA

>sp|Y022_OSHVF|UNCHARACTERIZED protein ORF22|Ostreid herpesvirus 1 (isolate France)

Query: 1 PDETTLKEL 9
PDET +K+L
Sbjct: 186 PDETYMKDL 194




19|Sequence|91|100|LKELAETLQQ

>sp|TMP_BPDP1|TAPE measure protein|Pneumococcus phage Dp-1 (Bacteriophage Dp-1)

Query: 2 KELAETLQ 9
KE+AET+Q
Sbjct: 328 KEMAETMQ 335


>sp|V240_FOWPN|PUTATIVE ankyrin repeat protein FPV240|Fowlpox virus (strain NVSL) (FPV)

Query: 1 LKELAETLQQ 10
LKELA+T Q
Sbjct: 352 LKELADTASQ 361




20|Sequence|96|105|ETLQQKNIDH

>sp|YL273_MIMIV|PUTATIVE ankyrin repeat protein L273|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 ETLQQKNIDH 10
E L +KNIDH
Sbjct: 116 EFLYKKNIDH 125


>sp|VP4_ROTBS|OUTER capsid protein VP4|Rotavirus C (isolate

Query: 2 TLQQKNID 9
TLQQ+N D
Sbjct: 654 TLQQRNFD 661


>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United

Query: 1 ETLQQKNID 9
+TLQQ+N D
Sbjct: 664 KTLQQRNFD 672


>sp|A625_PBCV1|PUTATIVE transposase A625R|Paramecium bursaria Chlorella virus 1

Query: 3 LQQKNIDH 10
L+ KNIDH
Sbjct: 136 LKNKNIDH 143


>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao

Query: 1 ETLQQKNI 8
ET++QKNI
Sbjct: 49 ETVEQKNI 56


>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973

Query: 1 ETLQQKNI 8
ET++QKNI
Sbjct: 49 ETVEQKNI 56


>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New

Query: 1 ETLQQKNI 8
ET++QKNI
Sbjct: 49 ETVEQKNI 56


>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972

Query: 1 ETLQQKNI 8
ET++QKNI
Sbjct: 49 ETVEQKNI 56


>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966

Query: 1 ETLQQKNI 8
ET++QKNI
Sbjct: 49 ETVEQKNI 56


>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964

Query: 1 ETLQQKNI 8
ET++QKNI
Sbjct: 49 ETVEQKNI 56


>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973

Query: 1 ETLQQKNI 8
ET++QKNI
Sbjct: 49 ETVEQKNI 56


>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964

Query: 1 ETLQQKNI 8
ET++QKNI
Sbjct: 49 ETVEQKNI 56




21|Sequence|101|110|KNIDHMLWLE

>sp|EA31_LAMBD|PROTEIN ea31|Escherichia phage lambda (Bacteriophage lambda)

Query: 1 KNIDHML 7
KNIDH L
Sbjct: 118 KNIDHFL 124


>sp|PRO_SRV1|GAG-PRO polyprotein|Simian retrovirus SRV-1

Query: 4 DHMLW 8
DH+LW
Sbjct: 370 DHLLW 374


>sp|GAG_SRV1|GAG polyprotein|Simian retrovirus SRV-1

Query: 4 DHMLW 8
DH+LW
Sbjct: 370 DHLLW 374


>sp|GAG_MPMV|GAG polyprotein|Mason-Pfizer monkey virus (MPMV) (Simian

Query: 4 DHMLW 8
DH+LW
Sbjct: 369 DHLLW 373


>sp|PRO_MPMV|GAG-PRO polyprotein|Mason-Pfizer monkey virus (MPMV) (Simian

Query: 4 DHMLW 8
DH+LW
Sbjct: 369 DHLLW 373


>sp|POLR_NORAV|REPLICATION polyprotein|Nora virus

Query: 2 NIDHMLWL 9
N DH++W
Sbjct: 423 NKDHLMWF 430


>sp|POL_FIVT2|POL polyprotein|Feline immunodeficiency virus (isolate TM2)

Query: 1 KNIDHMLW 8
KN +H+LW
Sbjct: 498 KNPEHILW 505


>sp|YO19_ADEG1|UNCHARACTERIZED protein ORF19|Fowl adenovirus A serotype 1

Query: 4 DHMLWLE 10
+HM+WL+
Sbjct: 419 NHMVWLK 425


>sp|MCP_SUHVS|MAJOR capsid protein|Suid herpesvirus 1 (strain Indiana

Query: 2 NIDHMLWLE 10
+ H+LW+E
Sbjct: 737 HFQHILWVE 745


>sp|YR707_MIMIV|UNCHARACTERIZED protein R707|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 KNIDHMLWLE 10
KNIDH+ L
Sbjct: 108 KNIDHLFKLS 117


>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 IDHMLWL 9
+DH+ W+
Sbjct: 328 VDHLTWI 334


>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 IDHMLWL 9
+DH+ W+
Sbjct: 328 VDHLTWI 334


>sp|NCTSP_BPN4|NON-CONTRACTILE tail sheath|Enterobacteria phage N4 (Bacteriophage N4)

Query: 4 DHMLW 8
DHM+W
Sbjct: 1355 DHMVW 1359


>sp|POL_MPMV|GAG-PRO-POL polyprotein|Mason-Pfizer monkey virus (MPMV) (Simian

Query: 4 DHMLW 8
DH+LW
Sbjct: 369 DHLLW 373


>sp|POL_SRV1|GAG-PRO-POL polyprotein|Simian retrovirus SRV-1

Query: 4 DHMLW 8
DH+LW
Sbjct: 370 DHLLW 374


>sp|TRM1_MUHVS|TRIPARTITE terminase subunit 1|Murid herpesvirus 1 (strain Smith)

Query: 2 NIDHMLW 8
N+ H LW
Sbjct: 319 NVSHSLW 325


>sp|L_LNYV3|RNA-DIRECTED RNA polymerase L|Lettuce necrotic yellows virus (isolate

Query: 2 NIDHMLWLE 10
+++H+LW E
Sbjct: 1750 DVNHLLWGE 1758




22|Sequence|106|115|MLWLEQPENI

>sp|ICP46_IIV3|IMMEDIATE-EARLY protein ICP-46 homolog|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 MLWLEQPENI 10
+LW+E+P N+
Sbjct: 366 LLWMEEPSNL 375


>sp|V006_FOWPN|UNCHARACTERIZED protein FPV006/FPV255|Fowlpox virus (strain NVSL) (FPV)

Query: 1 MLWLEQPE 8
+L+LEQPE
Sbjct: 136 LLYLEQPE 143


>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)

Query: 3 WLEQPENI 10
W++QP NI
Sbjct: 974 WIKQPTNI 981


>sp|UL38_HHV6H|APOPTOSIS inhibitor U19|Human herpesvirus 6B (HHV-6 variant

Query: 3 WLEQPEN 9
WL+ PEN
Sbjct: 373 WLKSPEN 379


>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 3 WLEQPENI 10
W+EQP +
Sbjct: 631 WIEQPTTV 638


>sp|CAPSD_HV19S|MAJOR capsid protein|Helminthosporium victoriae virus-190S (Hv190SV)

Query: 3 WLEQPEN 9
WL PEN
Sbjct: 485 WLGHPEN 491


>sp|GP_TSWVD|ENVELOPMENT polyprotein|Tomato spotted wilt virus (isolate

Query: 4 LEQPENI 10
+E+PENI
Sbjct: 1015 IEEPENI 1021


>sp|172L_IIV6|PUTATIVE helicase 172L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 MLWLEQPENI 10
MLW++ EN+
Sbjct: 41 MLWMKYRENL 50


>sp|50510_ASFM2|PROTEIN MGF 505-10R|African swine fever virus (isolate

Query: 3 WLEQPEN 9
WL+Q EN
Sbjct: 537 WLQQEEN 543


>sp|CVC1_HCMVM|CAPSID vertex component 1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 WLEQPE 8
WL QPE
Sbjct: 514 WLSQPE 519


>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)

Query: 1 MLWLEQPE 8
+LWL+Q E
Sbjct: 1584 LLWLDQNE 1591


>sp|CVC1_HCMVA|CAPSID vertex component 1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 WLEQPE 8
WL QPE
Sbjct: 514 WLSQPE 519


>sp|11013_ASFWA|PROTEIN MGF 110-13L|African swine fever virus (isolate

Query: 1 MLWLEQP 7
++WL QP
Sbjct: 51 LIWLSQP 57




23|Sequence|111|120|QPENIATCIA

>sp|L_TIBVC|RNA-DIRECTED RNA polymerase L|Tibrogargan virus (strain CS132) (TIBV)

Query: 1 QPENIATCIA 10
+P+NI TC A
Sbjct: 1091 KPDNIWTCSA 1100


>sp|RPB1_FRG3G|PUTATIVE DNA-directed RNA polymerase 008R|Frog virus 3 (isolate Goorha)

Query: 2 PENIATCI 9
PE +ATC+
Sbjct: 537 PEELATCL 544


>sp|POL2_RCMV|RNA2 polyprotein|Red clover mottle virus (RCMV)

Query: 2 PENIATCIA 10
PEN C+A
Sbjct: 487 PENTGCCLA 495


>sp|NS3D_BCHK4|NON-STRUCTURAL protein 3d|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 QPENIATCI 9
QP NI CI
Sbjct: 29 QPPNIIDCI 37


>sp|NS3D_BC133|NON-STRUCTURAL protein 3d|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 QPENIATCI 9
QP NI CI
Sbjct: 29 QPPNIIDCI 37




24|Sequence|116|125|ATCIALRPYP

>sp|L_TUPVT|RNA-DIRECTED RNA polymerase L|Tupaia virus (isolate Tupaia/Thailand/-/1986)

Query: 1 ATCIALRP 8
A CI LRP
Sbjct: 518 ALCIGLRP 525


>sp|LMBD2_REOVJ|OUTER capsid protein lambda-2|Reovirus type 2 (strain D5/Jones)

Query: 1 ATCIALRP 8
ATC+ +RP
Sbjct: 845 ATCVDIRP 852


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 1 ATCIALRPYP 10
ATC RP+P
Sbjct: 2221 ATCQTHRPHP 2230


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1 ATCIALRPYP 10
ATC RP+P
Sbjct: 2219 ATCQTHRPHP 2228


>sp|RIR1_MUHVS|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Murid herpesvirus 1 (strain

Query: 3 CIALRPY 9
C ALRPY
Sbjct: 659 CKALRPY 665


>sp|NEC1_HHV7J|NUCLEAR egress protein 1|Human herpesvirus 7 (strain JI)

Query: 2 TCIALRPY 9
TC+ L PY
Sbjct: 79 TCLDLSPY 86


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1 ATCIALRPYP 10
ATC RP+P
Sbjct: 2219 ATCQTHRPHP 2228


>sp|OE66_NPVLD|OCCLUSION-DERIVED virus envelope protein E66|Lymantria dispar multicapsid nuclear

Query: 2 TCIALRPY 9
TCIALR +
Sbjct: 149 TCIALRGF 156


>sp|UL24_EBVB9|PROTEIN UL24 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 4 IALRPYP 10
+AL+PYP
Sbjct: 82 VALQPYP 88




25|Sequence|121|130|LRPYPKEEVG

>sp|Y019_OSHVF|UNCHARACTERIZED protein ORF19|Ostreid herpesvirus 1 (isolate France)

Query: 1 LRPYPKEEV 9
L+PYPK+ V
Sbjct: 330 LKPYPKDYV 338


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 1 LRPYPKEEVG 10
LRP KE++G
Sbjct: 268 LRPESKEKIG 277


>sp|POL1_SDVS5|RNA1 polyprotein|Satsuma dwarf virus (isolate Satsuma

Query: 2 RPYPKEEVG 10
+ YP EEVG
Sbjct: 29 KTYPIEEVG 37


>sp|RPOA_EAVBU|REPLICASE polyprotein 1ab|Equine arteritis virus (strain Bucyrus)

Query: 1 LRPYPKEEVG 10
+R Y KEE+G
Sbjct: 1991 VRAYLKEEIG 2000


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 3 PYPKEEV 9
PYPK+ +
Sbjct: 261 PYPKQSI 267


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related

Query: 3 PYPKEEV 9
PYPK+ +
Sbjct: 261 PYPKQSI 267


>sp|VP10_MYRV9|UNCHARACTERIZED protein VP10|Cryphonectria parasitica mycoreovirus 1 (strain

Query: 1 LRPYPKEE 8
L P+PK+E
Sbjct: 220 LLPFPKDE 227


>sp|YO18_ADEG1|UNCHARACTERIZED protein ORF18|Fowl adenovirus A serotype 1

Query: 3 PYPKEEV 9
PYPK +V
Sbjct: 18 PYPKADV 24


>sp|UNG_VARV|URACIL-DNA glycosylase|Variola virus

Query: 3 PYPKEEVG 10
PYPK+ G
Sbjct: 69 PYPKDGTG 76


>sp|UNG_MONPV|URACIL-DNA glycosylase|Monkeypox virus (MPXV)

Query: 3 PYPKEEVG 10
PYPK+ G
Sbjct: 69 PYPKDGTG 76


>sp|UNG_VAR67|URACIL-DNA glycosylase|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3 PYPKEEVG 10
PYPK+ G
Sbjct: 69 PYPKDGTG 76


>sp|UNG_VACCC|URACIL-DNA glycosylase|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 PYPKEEVG 10
PYPK+ G
Sbjct: 69 PYPKDGTG 76


>sp|UNG_VACCA|URACIL-DNA glycosylase|Vaccinia virus (strain Ankara) (VACV)

Query: 3 PYPKEEVG 10
PYPK+ G
Sbjct: 69 PYPKDGTG 76


>sp|POL2_SDVS5|RNA2 polyprotein|Satsuma dwarf virus (isolate Satsuma

Query: 2 RPYPKEEVG 10
+ YP EEVG
Sbjct: 29 KTYPIEEVG 37


>sp|UNG_VACCW|URACIL-DNA glycosylase|Vaccinia virus (strain Western Reserve)

Query: 3 PYPKEEVG 10
PYPK+ G
Sbjct: 69 PYPKDGTG 76




26|Sequence|126|140|KEEVGQYLKKFRLFK

>sp|TERS_BPG20|TERMINASE, small subunit|Thermus phage G20c (Thermus thermophilus

Query: 1 KEEVGQYLKKFRLFK 15
+ EVGQ L++ R+F+
Sbjct: 60 RAEVGQALERARIFQ 74


>sp|TERS_BP234|TERMINASE, small subunit|Thermus virus P23-45 (Thermus thermophilus

Query: 1 KEEVGQYLKKFRLFK 15
+ EVGQ L++ R+F+
Sbjct: 60 RAEVGQALERARIFQ 74


>sp|VME1_IBV6|MEMBRANE protein|Avian infectious bronchitis virus (strain

Query: 4 VGQYLKKFRLFK 15
+G +++ FRLFK
Sbjct: 94 IGYWIQSFRLFK 105


>sp|RDRP_MNSV|RNA-DIRECTED RNA polymerase|Melon necrotic spot virus (MNSV)

Query: 3 EVGQYLKKFRLF 14
EVG+YL++F +
Sbjct: 443 EVGRYLRRFEHY 454


>sp|Y166_ABVP|PUTATIVE transmembrane protein ORF166|Acidianus bottle-shaped virus

Query: 3 EVGQYLKKFRLF 14
E+G++LKK+ F
Sbjct: 3 EIGEFLKKYAGF 14


>sp|RDRP_CARMV|RNA-DIRECTED RNA polymerase|Carnation mottle virus (CarMV)

Query: 3 EVGQYLKKF 11
E+G+YLKK+
Sbjct: 419 ELGRYLKKY 427


>sp|RDRP_CARMS|PROBABLE RNA-directed RNA polymerase|Carnation mottle virus (isolate

Query: 3 EVGQYLKKF 11
E+G+YLKK+
Sbjct: 419 ELGRYLKKY 427


>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin

Query: 2 EEVGQYLKKFRLFK 15
E VG Y++ F +FK
Sbjct: 520 EVVGSYIRYFTVFK 533


>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)

Query: 2 EEVGQYLKKFRLFK 15
E VG Y++ F +FK
Sbjct: 520 EVVGSYIRYFTVFK 533


>sp|RDRP_BANNV|RNA-DIRECTED RNA polymerase VP1|Banna virus (BAV)

Query: 1 KEEVGQYLKKFRL 13
K+ G Y+KKF L
Sbjct: 345 KKLAGSYVKKFNL 357


>sp|PEBS_BPPRM|PHYCOERYTHROBILIN synthase|Prochlorococcus phage P-SSM2

Query: 2 EEVGQYLKKFRLF 14
+EV QYL F+L+
Sbjct: 162 DEVDQYLDTFKLY 174


>sp|POLG_MDMV|GENOME polyprotein|Maize dwarf mosaic virus (MDMV)

Query: 1 KEEVGQYLKKF 11
+EE+ +YLK+F
Sbjct: 24 EEEIEKYLKQF 34


>sp|US18_HCMVT|TRANSMEMBRANE protein HWLF5|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1 KEEVGQYLKKFRLF 14
++++ Q+LK+F+L
Sbjct: 30 EQQLFQWLKRFKLL 43


>sp|US18_HCMVM|TRANSMEMBRANE protein US18|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 KEEVGQYLKKFRLF 14
++++ Q+LK+F+L
Sbjct: 30 EQQLFQWLKRFKLL 43


>sp|US18_HCMVA|TRANSMEMBRANE protein US18|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 KEEVGQYLKKFRLF 14
++++ Q+LK+F+L
Sbjct: 30 EQQLFQWLKRFKLL 43


>sp|FUS_SV41|FUSION glycoprotein F0|Simian virus 41 (SV41)

Query: 4 VGQYLKKF 11
VG YLK+F
Sbjct: 369 VGNYLKRF 376


>sp|RDRP_TCV|RNA-DIRECTED RNA polymerase|Turnip crinkle virus (TCV)

Query: 3 EVGQYLKKF 11
EVG+YLK +
Sbjct: 425 EVGKYLKPY 433


>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)

Query: 2 EEVGQYLKKFRL 13
E +G Y+K F L
Sbjct: 799 EAIGSYVKNFLL 810


>sp|RDRP_POLVP|RNA-DIRECTED RNA polymerase|Pothos latent virus (isolate Pigeonpea/India)

Query: 3 EVGQYLKKF--RLFK 15
EVG+YLK RL K
Sbjct: 404 EVGRYLKPLEPRLMK 418


>sp|DPOL1_BPK54|DEPOLYMERASE 1, capsule K8-specific|Klebsiella phage K5-4 (Bacteriophage K5-4)

Query: 1 KEEVGQYLKKF 11
++E+ QY+ KF
Sbjct: 168 RDEIIQYISKF 178


>sp|V143_NPVOP|ATP-DEPENDENT DNA helicase P143|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 2 EEVGQYLKKFRLFK 15
+E+ YLK R FK
Sbjct: 112 DEIKNYLKLDRFFK 125


>sp|DPOL1_BPK52|DEPOLYMERASE 1, capsule K30/K69-specific|Klebsiella phage K5-2 (Bacteriophage

Query: 1 KEEVGQYLKKF 11
KE+ +YL+KF
Sbjct: 168 KEQFYEYLEKF 178


>sp|YL769_MIMIV|PUTATIVE ankyrin repeat protein L769|Acanthamoeba polyphaga mimivirus

Query: 2 EEVGQYLKKFRLFK 15
E++ QY F+L+K
Sbjct: 81 EKLLQYCSSFKLYK 94


>sp|CEP1_HHV8P|CYTOPLASMIC envelopment protein 1|Human herpesvirus 8 type P

Query: 3 EVGQYLKKFRLFK 15
EV +YLK LFK
Sbjct: 257 EVLKYLKMCTLFK 269


>sp|MVP_RYSV|MOVEMENT protein|Rice yellow stunt virus (RYSV)

Query: 2 EEVGQYLKKFRLFK 15
+E+ L KF LFK
Sbjct: 17 DEIDLSLSKFSLFK 30


>sp|YR530_MIMIV|UNCHARACTERIZED protein R530|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 KEEVGQYLKKFRL 13
KE++ + K+FR+
Sbjct: 405 KEQIESFYKRFRI 417


>sp|POLG_SUMVS|GENOME polyprotein|Sugarcane mosaic virus (strain SC)

Query: 1 KEEVGQYLKKF 11
+EE+ +Y K+F
Sbjct: 24 EEEIEKYFKQF 34




27|Sequence|131|140|QYLKKFRLFK

>sp|POLN_OYMV|NON-STRUCTURAL replication polyprotein|Ononis yellow mosaic virus

Query: 3 LKKFRLF 9
LKKF+LF
Sbjct: 357 LKKFQLF 363


>sp|VME1_IBV6|MEMBRANE protein|Avian infectious bronchitis virus (strain

Query: 2 YLKKFRLFK 10
+++ FRLFK
Sbjct: 97 WIQSFRLFK 105






THE END