1|SequenceR|10|1|TNVLRGFFQM
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 NVLRGF 7
NVLRGF
Sbjct: 79 NVLRGF 84
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 NVLRGF 7
NVLRGF
Sbjct: 79 NVLRGF 84
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 NVLRGF 7
NVLRGF
Sbjct: 79 NVLRGF 84
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 NVLRGF 7
NVLRGF
Sbjct: 79 NVLRGF 84
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 NVLRGF 7
NVLRGF
Sbjct: 79 NVLRGF 84
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 NVLRGF 7
NVLRGF
Sbjct: 79 NVLRGF 84
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 NVLRGF 7
NVLRGF
Sbjct: 79 NVLRGF 84
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 3 VLRGFFQM 10
+LR FF+M
Sbjct: 87 ILRSFFKM 94
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank
Query: 3 VLRGFFQM 10
+LR FF+M
Sbjct: 87 ILRSFFKM 94
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 3 VLRGFFQM 10
+LR FF+M
Sbjct: 87 ILRSFFKM 94
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 NVLRGF 7
NVLRGF
Sbjct: 79 NVLRGF 84
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 5 RGFFQM 10
RGFF M
Sbjct: 3 RGFFNM 8
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 5 RGFFQM 10
RGFF M
Sbjct: 3 RGFFNM 8
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 5 RGFFQM 10
RGFF M
Sbjct: 3 RGFFNM 8
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 2 NVLRGFFQ 9
NVL FFQ
Sbjct: 449 NVLEKFFQ 456
Query: 4 LRGFFQM 10
LR FF+M
Sbjct: 88 LRSFFKM 94
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 4 LRGFFQM 10
LR FF+M
Sbjct: 88 LRSFFKM 94
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 TNVLRGFF 8
TN RGF+
Sbjct: 826 TNAWRGFW 833
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 LRGFF 8
LRGFF
Sbjct: 4463 LRGFF 4467
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 TNVLRG 6
TN+LRG
Sbjct: 1024 TNLLRG 1029
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 1 TNVLRG 6
TN+LRG
Sbjct: 1024 TNLLRG 1029
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 TNVLRGFF 8
TNV+ G F
Sbjct: 396 TNVIAGVF 403
2|SequenceR|15|6|TVGSFTNVLR
>sp|VP7_ROTGI|OUTER capsid glycoprotein VP7|Rotavirus B (isolate RVB/Rat/United
Query: 3 GSFTNVLR 10
G+FTN+ R
Sbjct: 42 GNFTNIFR 49
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 TVGSFTNVLR 10
T G F +VLR
Sbjct: 1803 TFGDFDDVLR 1812
>sp|US27_HCMVA|G-PROTEIN coupled receptor homolog US27|Human cytomegalovirus (strain
Query: 2 VGSFTNVL 9
VG+F NVL
Sbjct: 43 VGTFLNVL 50
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 TVGSFTNV 8
T GS+TN+
Sbjct: 170 TFGSYTNL 177
>sp|U79_HHV6Z|PROTEIN U79|Human herpesvirus 6B (strain Z29)
Query: 3 GSFTNVLR 10
GSF NV++
Sbjct: 9 GSFDNVIQ 16
>sp|U79_HHV6H|PROTEIN U79/U80|Human herpesvirus 6B (HHV-6 variant
Query: 3 GSFTNVLR 10
GSF NV++
Sbjct: 9 GSFDNVIQ 16
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 TVGSFTNVL 9
T G F+N+L
Sbjct: 114 TYGQFSNLL 122
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 1 TVGSFTNVL 9
T G F+N+L
Sbjct: 114 TYGQFSNLL 122
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 TVGSFTNVL 9
T G F+N+L
Sbjct: 114 TYGQFSNLL 122
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 TVGSFT 6
T+GSFT
Sbjct: 1863 TLGSFT 1868
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 1 TVGSFT 6
T+GSFT
Sbjct: 1862 TLGSFT 1867
>sp|PG170_MONPV|PROTEIN OPG170|Monkeypox virus (MPXV)
Query: 1 TVGSFTN 7
TVG +TN
Sbjct: 86 TVGVYTN 92
>sp|PG170_VACCC|PROTEIN OPG170|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 TVGSFTN 7
TVG +TN
Sbjct: 84 TVGVYTN 90
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 1 TVGSFTNVL 9
T G F+N+L
Sbjct: 114 TYGQFSNLL 122
>sp|NSP1_ROTH6|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 2 VGSFTNVLR 10
V FTN+++
Sbjct: 113 VNKFTNIIK 121
3|SequenceR|20|11|NSFLNTVGSF
>sp|VE2_HPV50|REGULATORY protein E2|Human papillomavirus type 50
Query: 2 SFLNTVG 8
SFLNTVG
Sbjct: 375 SFLNTVG 381
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 2 SFLNTVGSF 10
SF+ VG+F
Sbjct: 932 SFIQGVGNF 940
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 2 SFLNTVGSF 10
S LNT G+F
Sbjct: 862 STLNTHGAF 870
>sp|RDRP_I93A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 SFLNTVGSF 10
S++N G+F
Sbjct: 482 SYINKTGTF 490
>sp|RDRP_I88A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 SFLNTVGSF 10
S++N G+F
Sbjct: 482 SYINKTGTF 490
>sp|RDRP_I83A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 2 SFLNTVGSF 10
S++N G+F
Sbjct: 482 SYINKTGTF 490
>sp|RDRP_I80AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 SFLNTVGSF 10
S++N G+F
Sbjct: 482 SYMNRTGTF 490
>sp|RDRP_I80A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 SFLNTVGSF 10
S++N G+F
Sbjct: 482 SYINKTGTF 490
>sp|RDRP_I00A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/New
Query: 2 SFLNTVGSF 10
S++N G+F
Sbjct: 482 SYINKTGTF 490
>sp|RDRP_I80A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 SFLNTVGSF 10
S++N G+F
Sbjct: 482 SYINRTGTF 490
>sp|RDRP_I78A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 SFLNTVGSF 10
S++N G+F
Sbjct: 482 SYINRTGTF 490
>sp|RDRP_I78A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 SFLNTVGSF 10
S++N G+F
Sbjct: 482 SYINRTGTF 490
>sp|RDRP_I78A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 SFLNTVGSF 10
S++N G+F
Sbjct: 482 SYINRTGTF 490
>sp|RDRP_I72A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 SFLNTVGSF 10
S++N G+F
Sbjct: 482 SYINRTGTF 490
>sp|RDRP_I72A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 SFLNTVGSF 10
S++N G+F
Sbjct: 482 SYINRTGTF 490
>sp|RDRP_I72A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 SFLNTVGSF 10
S++N G+F
Sbjct: 482 SYINRTGTF 490
>sp|ITP_HHV7J|INNER tegument protein|Human herpesvirus 7 (strain JI)
Query: 1 NSFLNTV 7
N FLNTV
Sbjct: 336 NGFLNTV 342
4|SequenceR|25|16|KVRFPNSFLN
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 3 RFPNSFLN 10
R+PNSF +
Sbjct: 1387 RWPNSFTD 1394
>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39
Query: 3 RFPNSF 8
+FPN+F
Sbjct: 584 KFPNAF 589
>sp|VL1_HPV41|MAJOR capsid protein L1|Human papillomavirus type 41
Query: 1 KVRFPN 6
+VRFPN
Sbjct: 94 RVRFPN 99
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 3 RFPNSFLN 10
R P FLN
Sbjct: 283 RLPQGFLN 290
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 2 VRFPNSFLN 10
V PN FLN
Sbjct: 594 VEKPNYFLN 602
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 2 VRFPNSF 8
+ FPN+F
Sbjct: 572 IPFPNTF 578
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 3 RFPNSFLN 10
R P FLN
Sbjct: 283 RLPQGFLN 290
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 2 VRFPNSF 8
+ FPN+F
Sbjct: 576 IPFPNTF 582
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 3 RFPNSFLN 10
R P FLN
Sbjct: 283 RLPQGFLN 290
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 4 FPNSFLN 10
FP+ F+N
Sbjct: 255 FPHQFIN 261
>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38
Query: 1 KVRFPNSF 8
++ FPN F
Sbjct: 540 QIDFPNKF 547
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 4 FPNSFLN 10
FP+ F+N
Sbjct: 254 FPHQFIN 260
>sp|VSGP_EBORE|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 KVRFPNSFL 9
K FPN+F+
Sbjct: 295 KKTFPNNFM 303
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 5 PNSFLN 10
PN FLN
Sbjct: 589 PNYFLN 594
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 4 FPNSFLN 10
FP+ F+N
Sbjct: 253 FPHQFIN 259
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 4 FPNSFLN 10
FP+ F+N
Sbjct: 255 FPHQFIN 261
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 VRFPN 6
VRFPN
Sbjct: 314 VRFPN 318
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 4 FPNSFLN 10
FP+ F+N
Sbjct: 253 FPHQFIN 259
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 5 PNSFLN 10
PN FLN
Sbjct: 589 PNYFLN 594
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 VRFPN 6
VRFPN
Sbjct: 327 VRFPN 331
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 4 FPNSFLN 10
F NS+LN
Sbjct: 4070 FDNSYLN 4076
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 4 FPNSFLN 10
FP+ F+N
Sbjct: 256 FPHQFIN 262
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 FPNSFLN 10
F NS+LN
Sbjct: 4070 FDNSYLN 4076
>sp|VSGP_EBORS|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 1 KVRFPNSFLN 10
K FPN+F+
Sbjct: 295 KKTFPNNFME 304
>sp|VSGP_EBORR|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 KVRFPNSFLN 10
K FPN+F+
Sbjct: 295 KKTFPNNFME 304
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 4 FPNSFLN 10
+P+ FLN
Sbjct: 315 YPHQFLN 321
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 3 RFPNSFLN 10
+FP+ F+N
Sbjct: 174 KFPSVFIN 181
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 RFPNSFLN 10
+FP+ F+N
Sbjct: 174 KFPSVFIN 181
5|SequenceR|30|21|AVAVEKVRFP
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 2 VAVEKVR 8
VA+EK+R
Sbjct: 364 VAIEKIR 370
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 2 VAVEKVR 8
VA+EK+R
Sbjct: 366 VAIEKIR 372
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 3 AVEKVR 8
AVEKVR
Sbjct: 3376 AVEKVR 3381
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 2 VAVEKVR 8
VA+EK+R
Sbjct: 366 VAIEKIR 372
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 2 VAVEKVR 8
VA+EK+R
Sbjct: 364 VAIEKIR 370
>sp|POLS_RRV2|STRUCTURAL polyprotein|Ross river virus (strain 213970)
Query: 2 VAVEKVR 8
VA+EK+R
Sbjct: 32 VAIEKIR 38
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 3 AVEKVR 8
AVEKVR
Sbjct: 3378 AVEKVR 3383
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 3 AVEKVR 8
AVEKVR
Sbjct: 3378 AVEKVR 3383
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 3 AVEKVR 8
AVEKVR
Sbjct: 3378 AVEKVR 3383
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 3 AVEKVR 8
AVEKVR
Sbjct: 3378 AVEKVR 3383
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 3 AVEKVR 8
AVEKVR
Sbjct: 3378 AVEKVR 3383
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 3 AVEKVR 8
AVEKVR
Sbjct: 3378 AVEKVR 3383
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 2 VAVEKVRFP 10
+A E+V FP
Sbjct: 321 IAGERVSFP 329
6|SequenceR|35|26|SSTYDAVAVE
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 SSTYDAVAVE 10
S +DA AVE
Sbjct: 2049 SEPFDAAAVE 2058
>sp|UL91_HHV7J|PROTEIN U62|Human herpesvirus 7 (strain JI)
Query: 4 YDAVAVE 10
YD +AVE
Sbjct: 52 YDTLAVE 58
>sp|RDRP_I82A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I80A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I77A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I76A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I73A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I57A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I57A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I57A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I05A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I03A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I03A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I02A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I02A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I02A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I02A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I02A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Guinea
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 2 STYDAVA 8
S YDAVA
Sbjct: 484 SAYDAVA 490
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 2 STYDAVA 8
S YDAVA
Sbjct: 484 SAYDAVA 490
>sp|RDRP_I96A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I79A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I78A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I78A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I75A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I73A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Port
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I72A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I68A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I60A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Ann
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I57A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I02A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I02A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I01A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I00A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I97A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I97A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I78A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I73A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I57A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 2 STYDAVA 8
S YDAVA
Sbjct: 484 SAYDAVA 490
>sp|RDRP_I93A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I83A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I80A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I75A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I72A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I72A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I67A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I59A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I88A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I85A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I70A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I68A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I71A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
>sp|RDRP_I68A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 SSTYDAVA 8
S YDAVA
Sbjct: 654 SMEYDAVA 661
7|SequenceR|40|31|ERVRDSSTYD
>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P
Query: 3 VRDSST 8
VRDSST
Sbjct: 62 VRDSST 67
>sp|M1_DHVI1|MATRIX protein 1|Dhori virus (strain Indian/1313/61) (Dho)
Query: 3 VRDSSTY 9
VRD STY
Sbjct: 42 VRDESTY 48
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 VRDSST 8
VRDSST
Sbjct: 1765 VRDSST 1770
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 VRDSST 8
VRDSST
Sbjct: 1765 VRDSST 1770
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 VRDSST 8
VRDSST
Sbjct: 1765 VRDSST 1770
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 VRDSST 8
VRDSST
Sbjct: 1765 VRDSST 1770
8|SequenceR|45|36|ILQGEERVRD
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 2 LQGEERVRD 10
+QG ERV D
Sbjct: 2058 MQGFERVYD 2066
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 2 LQGEERVRD 10
+QG ERV D
Sbjct: 2057 MQGFERVYD 2065
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 2 LQGEERVRD 10
+QG ERV D
Sbjct: 2057 MQGFERVYD 2065
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 2 LQGEERVRD 10
+QG ERV D
Sbjct: 2057 MQGFERVYD 2065
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 2 LQGEERVRD 10
+QG ERV D
Sbjct: 2055 MQGFERVYD 2063
>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 LQGEERVRD 10
L EE+V+D
Sbjct: 88 LHAEEKVKD 96
>sp|RIR2_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 5 EERVRD 10
EE+VRD
Sbjct: 139 EEKVRD 144
>sp|RIR2_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Dumas)
Query: 5 EERVRD 10
EE+VRD
Sbjct: 139 EEKVRD 144
>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 LQGEERVRD 10
L EE+V+D
Sbjct: 88 LHAEEKVKD 96
>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 LQGEERVRD 10
L EE+V+D
Sbjct: 88 LHAEEKVKD 96
>sp|AN_HCMVM|ALKALINE nuclease|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ILQGEERVRD 10
++ G E VRD
Sbjct: 227 VMHGREPVRD 236
>sp|AN_HCMVA|ALKALINE nuclease|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ILQGEERVRD 10
++ G E VRD
Sbjct: 227 VMHGREPVRD 236
>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 LQGEERVRD 10
L EE+V+D
Sbjct: 88 LHAEEKVKD 96
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 LQGEERVRD 10
L EE+V+D
Sbjct: 88 LHAEEKVKD 96
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 LQGEERVRD 10
L EE+V+D
Sbjct: 88 LHAEEKVKD 96
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 LQGEERVRD 10
L EE+V+D
Sbjct: 88 LHAEEKVKD 96
>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 LQGEERVRD 10
L EE+V+D
Sbjct: 88 LHAEEKVKD 96
>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 LQGEERVRD 10
L EE+V+D
Sbjct: 88 LHAEEKVKD 96
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 LQGEERVRD 10
L EE+V+D
Sbjct: 88 LHAEEKVKD 96
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 LQGEERVRD 10
L EE+V+D
Sbjct: 88 LHAEEKVKD 96
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 LQGEERVRD 10
L EE+V+D
Sbjct: 88 LHAEEKVKD 96
>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 LQGEERVRD 10
L EE+V+D
Sbjct: 88 LHAEEKVKD 96
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 LQGEERVRD 10
L EE+V+D
Sbjct: 88 LHAEEKVKD 96
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 LQGEERVRD 10
L EE+V+D
Sbjct: 88 LHAEEKVKD 96
>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 LQGEERVRD 10
L EE+V+D
Sbjct: 88 LHAEEKVKD 96
>sp|TEG7_HCMVM|TEGUMENT protein UL51 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ILQGEERVRD 10
++QGE VR+
Sbjct: 186 VVQGESGVRE 195
>sp|TEG7_HCMVA|TEGUMENT protein UL51 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ILQGEERVRD 10
++QGE VR+
Sbjct: 186 VVQGESGVRE 195
9|SequenceR|50|41|TNQFLILQGE
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 NQFLIL 7
NQFLIL
Sbjct: 1168 NQFLIL 1173
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 2 NQFLIL 7
NQFLIL
Sbjct: 1168 NQFLIL 1173
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 NQFLILQGE 10
NQ+ I +GE
Sbjct: 854 NQYAICRGE 862
>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 TNQFLILQG 9
TNQ ++L+G
Sbjct: 87 TNQQVVLEG 95
>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P
Query: 4 FLILQG 9
FL+LQG
Sbjct: 237 FLLLQG 242
>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 TNQFLILQG 9
TNQ ++L+G
Sbjct: 87 TNQQVVLEG 95
>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 TNQFLILQG 9
TNQ ++L+G
Sbjct: 87 TNQQVVLEG 95
>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 TNQFLI 6
TNQ+LI
Sbjct: 592 TNQYLI 597
>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 TNQFLI 6
TNQ+LI
Sbjct: 592 TNQYLI 597
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 TNQFLI 6
TNQ+LI
Sbjct: 593 TNQYLI 598
10|SequenceR|55|46|WTRNPTNQFL
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 1 WTRNPTNQ 8
W NP+N+
Sbjct: 715 WVENPSNR 722
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 WTRNPTN 7
WTR+P N
Sbjct: 2120 WTRDPRN 2126
>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)
Query: 1 WTRNPTNQ 8
+ RNPTN+
Sbjct: 341 YIRNPTNE 348
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 WTRNPT 6
WT+NP+
Sbjct: 2106 WTKNPS 2111
>sp|VE2_HPV26|REGULATORY protein E2|Human papillomavirus type 26
Query: 1 WTRNPTNQ 8
WT N TNQ
Sbjct: 332 WTSNDTNQ 339
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 WTRNPTN 7
WT++P N
Sbjct: 2125 WTKDPKN 2131
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 WTRNPTN 7
WT++P N
Sbjct: 2135 WTKDPKN 2141
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 WTRNPTN 7
WT++P N
Sbjct: 2145 WTKDPKN 2151
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 WTRNPTN 7
WT++P N
Sbjct: 2133 WTKDPKN 2139
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 WTRNPTN 7
WT++P N
Sbjct: 2125 WTKDPKN 2131
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 WTRNPTN 7
WT++P N
Sbjct: 2129 WTKDPKN 2135
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 WTRNPTN 7
WT++P N
Sbjct: 2136 WTKDPKN 2142
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 WTRNPTN 7
WT++P N
Sbjct: 2135 WTKDPKN 2141
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 WTRNPTN 7
WT++P N
Sbjct: 2138 WTKDPKN 2144
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 WTRNPTN 7
WT++P N
Sbjct: 2127 WTKDPKN 2133
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 WTRNPTN 7
WT++P N
Sbjct: 2143 WTKDPKN 2149
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 WTRNPTNQFL 10
WT+ PT Q +
Sbjct: 19 WTQRPTIQVI 28
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 WTRNPTNQFL 10
WT+ PT Q +
Sbjct: 19 WTQRPTIQVI 28
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 WTRNPTN 7
WT++P N
Sbjct: 2127 WTKDPKN 2133
>sp|PB2_I35A3|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Phila/1935
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 WTRNPTN 7
WT++P N
Sbjct: 2127 WTKDPKN 2133
>sp|PB2_I79A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Kiev/59/1979
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|PB2_I18A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Brevig
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 WTRNPTN 7
WT++P N
Sbjct: 2137 WTKDPKN 2143
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 WTRNPTNQFL 10
WT+ PT Q +
Sbjct: 19 WTQRPTIQVI 28
>sp|PB2_I40A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hickox/1940
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 WTRNPTN 7
W + PTN
Sbjct: 974 WIKQPTN 980
>sp|PB2_I76A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/110/1976
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|PB2_I75A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Victoria/3/1975
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|PB2_I75A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Beijing/39/1975
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|PB2_I73A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Port
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|PB2_I72A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/101/1972
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|PB2_I72A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/102/1972
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|PB2_I72A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Udorn/307/1972
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|PB2_I71A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/1/1971
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|PB2_I70A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Qu/7/1970
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|PB2_I69A0|POLYMERASE basic protein 2|Influenza A virus (strain A/England/878/1969
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|PB2_I68A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Northern
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|PB2_I68A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|PB2_I57A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|PB2_I57A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/1957
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|PB2_I54A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|PB2_I36A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Henry/1936
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|PB2_I34A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Puerto
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|PB2_I06A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|PB2_I68A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Korea/426/1968
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|PB2_I67A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Tokyo/3/1967
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|PB2_I57A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Singapore/1/1957
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|PB2_I57A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|PB2_I45A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 WTRNPTN 7
WT++P N
Sbjct: 2121 WTKDPKN 2127
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 WTRNPTN 7
WT++P N
Sbjct: 2126 WTKDPKN 2132
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 WTRNPTN 7
WT++P N
Sbjct: 2126 WTKDPKN 2132
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 WTRNPTN 7
WT++P N
Sbjct: 2148 WTKDPRN 2154
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 WTRNPTN 7
WT++P N
Sbjct: 2136 WTKDPRN 2142
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 WTRNPTN 7
WT++P N
Sbjct: 2124 WTKDPKN 2130
>sp|PB2_I80A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/4/1980
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|PB2_I78A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/2/1978
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|PB2_I60A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Ann
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|PB2_I57A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Japan/305/1957
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|PB2_I51A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|PB2_I43A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Iowa/1943
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|PB2_I07A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|PB2_I000X|POLYMERASE basic protein 2|Influenza A virus (strain A/X-31
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|AN_HHV6U|ALKALINE nuclease|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 WTRNPTNQFL 10
W ++ NQ+L
Sbjct: 469 WAQSAVNQYL 478
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 WTRNPTN 7
WT++P N
Sbjct: 2147 WTKDPRN 2153
>sp|PB2_I96A2|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|PB2_I33A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|PB2_I00A1|POLYMERASE basic protein 2|Influenza A virus (strain A/New
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|PB2_I78A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/18/1978
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 WTRNPTN 7
WT++P N
Sbjct: 2148 WTKDPRN 2154
>sp|PB2_I96A3|POLYMERASE basic protein 2|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|PB2_I77AB|POLYMERASE basic protein 2|Influenza A virus (strain A/USSR/90/1977
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 WTRNPTN 7
WT++P N
Sbjct: 2149 WTKDPRN 2155
>sp|PB2_I83A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chile/1/1983
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|PB2_I80AA|POLYMERASE basic protein 2|Influenza A virus (strain A/India/6263/1980
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|PB2_I77AA|POLYMERASE basic protein 2|Influenza A virus (strain A/Brazil/11/1978
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|PB2_I47A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Fort
Query: 1 WTRNPT 6
W++NPT
Sbjct: 564 WSQNPT 569
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 WTRNPTN 7
WT++P N
Sbjct: 2094 WTKDPKN 2100
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 WTRNPTN 7
WT++P N
Sbjct: 2148 WTKDPRN 2154
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 WTRNPTN 7
WT++P N
Sbjct: 2151 WTKDPRN 2157
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 WTRNPTN 7
WT++P N
Sbjct: 2151 WTKDPRN 2157
>sp|AN_HHV6Z|ALKALINE nuclease|Human herpesvirus 6B (strain Z29)
Query: 1 WTRNPTNQFL 10
W ++ NQ+L
Sbjct: 469 WAQSAVNQYL 478
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 WTRNPTN 7
WT++P N
Sbjct: 2156 WTKDPRN 2162
>sp|POLG_LIVSB|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/SB
Query: 1 WTRNPTN 7
W R PT+
Sbjct: 314 WKRTPTD 320
>sp|POLG_LIVNO|GENOME polyprotein|Louping ill virus (isolate Sheep
Query: 1 WTRNPTN 7
W R PT+
Sbjct: 314 WKRTPTD 320
>sp|POLG_LIV31|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/31/1931)
Query: 1 WTRNPTN 7
W R PT+
Sbjct: 314 WKRTPTD 320
>sp|NCAP_DHVI1|NUCLEOPROTEIN virus (strain Indian/1313/61) (Dho)
Query: 1 WTRNPTNQFL 10
W RNP + L
Sbjct: 140 WQRNPVTREL 149
>sp|PB2_I83A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 WTRNPT 6
W+ NPT
Sbjct: 564 WSHNPT 569
>sp|POLG_LIVN1|GENOME polyprotein|Louping ill virus (strain Negishi
Query: 1 WTRNPTN 7
W R PT+
Sbjct: 314 WKRTPTD 320
>sp|UL95_HHV7J|PROTEIN U67|Human herpesvirus 7 (strain JI)
Query: 5 PTNQFL 10
PTN FL
Sbjct: 51 PTNNFL 56
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 TRNPTN 7
TR+PTN
Sbjct: 2816 TRDPTN 2821
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 WTRNPTN 7
W R PT+
Sbjct: 594 WKRTPTD 600
>sp|TYSY_HHV8P|THYMIDYLATE synthase|Human herpesvirus 8 type P
Query: 1 WTRNPTNQFL 10
W +N + +FL
Sbjct: 133 WDKNGSREFL 142
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 WTRNPTN 7
W R PT+
Sbjct: 594 WKRTPTD 600
>sp|ICP47_HHV2H|ICP47 protein|Human herpesvirus 2 (strain HG52)
Query: 2 TRNPTNQ 8
+RNPT Q
Sbjct: 63 SRNPTQQ 69
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 1 WTRNPTNQFL 10
WT PT Q +
Sbjct: 19 WTPRPTIQVI 28
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 NPTNQFL 10
NP QFL
Sbjct: 404 NPKEQFL 410
>sp|PG170_VACCC|PROTEIN OPG170|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 WTRNPTN 7
WT P N
Sbjct: 104 WTTEPIN 110
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 1 WTRNPTNQFL 10
WT PT Q +
Sbjct: 19 WTPRPTIQVI 28
>sp|PG170_MONPV|PROTEIN OPG170|Monkeypox virus (MPXV)
Query: 1 WTRNPTN 7
WT P N
Sbjct: 106 WTTEPMN 112
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 WTRNPTNQ 8
W N TNQ
Sbjct: 395 WVENKTNQ 402
>sp|PG170_VAR67|PROTEIN OPG170|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 WTRNPTN 7
WT P N
Sbjct: 104 WTMEPIN 110
>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59
Query: 4 NPTNQFL 10
+PTNQ L
Sbjct: 183 SPTNQLL 189
>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)
Query: 3 RNPTNQFL 10
+NP N F+
Sbjct: 466 KNPLNHFI 473
>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 4 NPTNQ 8
NPTNQ
Sbjct: 85 NPTNQ 89
>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 4 NPTNQ 8
NPTNQ
Sbjct: 85 NPTNQ 89
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 1 WTRNPTNQFL 10
WT PT Q +
Sbjct: 19 WTPRPTIQVI 28
>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 4 NPTNQ 8
NPTNQ
Sbjct: 85 NPTNQ 89
>sp|NCAP_SARS2|NUCLEOPROTEIN acute respiratory syndrome coronavirus
Query: 2 TRNPTN 7
TRNP N
Sbjct: 148 TRNPAN 153
11|SequenceR|60|51|VLVCDWTRNP
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 VLVCDWT 7
+ CDWT
Sbjct: 5410 IATCDWT 5416
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 VLVCDWT 7
+ CDWT
Sbjct: 5433 IATCDWT 5439
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 6 WTRNP 10
WT+NP
Sbjct: 2106 WTKNP 2110
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 2 LVCDW 6
++CDW
Sbjct: 114 MICDW 118
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 4 CDWT 7
CDWT
Sbjct: 358 CDWT 361
Query: 6 WTRNP 10
WTR P
Sbjct: 1696 WTRGP 1700
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 4 CDWT 7
CDWT
Sbjct: 357 CDWT 360
Query: 6 WTRNP 10
WTR P
Sbjct: 1697 WTRGP 1701
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 4 CDWT 7
CDWT
Sbjct: 289 CDWT 292
Query: 5 DWTRNP 10
DW R P
Sbjct: 237 DWNRKP 242
Query: 6 WTRNP 10
WTR P
Sbjct: 1606 WTRGP 1610
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 CDWTRN 9
CDWT +
Sbjct: 5422 CDWTES 5427
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 6 WTRNP 10
WTR+P
Sbjct: 2120 WTRDP 2124
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 5 DWTRNP 10
DW NP
Sbjct: 2545 DWKNNP 2550
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 5 DWTRNP 10
DW NP
Sbjct: 2545 DWKNNP 2550
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 LVCDWTRNP 10
L CD+ NP
Sbjct: 5822 LGCDYVYNP 5830
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 LVCDWTRNP 10
L CD+ NP
Sbjct: 5797 LGCDYVYNP 5805
>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 5 DWTRN 9
DWT+N
Sbjct: 614 DWTKN 618
>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 5 DWTRN 9
DWT+N
Sbjct: 614 DWTKN 618
>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 5 DWTRN 9
DWT+N
Sbjct: 614 DWTKN 618
>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 5 DWTRN 9
DWT+N
Sbjct: 614 DWTKN 618
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 4 CDWTRN 9
CDW ++
Sbjct: 2806 CDWLKD 2811
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 1 VLVCDWTR 8
VL+C +TR
Sbjct: 469 VLICPYTR 476
>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1
Query: 5 DWTRNP 10
DW +NP
Sbjct: 144 DWRKNP 149
>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 5 DWTRN 9
DWT+N
Sbjct: 614 DWTKN 618
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 5 DWTRN 9
DWT+N
Sbjct: 614 DWTKN 618
>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 5 DWTRN 9
DWT+N
Sbjct: 615 DWTKN 619
>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 5 DWTRN 9
DWT+N
Sbjct: 615 DWTKN 619
>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 5 DWTRN 9
DWT+N
Sbjct: 615 DWTKN 619
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 CDWTRNP 10
CD+ NP
Sbjct: 6170 CDYVYNP 6176
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 CDWTRNP 10
CD+ NP
Sbjct: 6220 CDYVYNP 6226
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 CDWTRNP 10
CD+ NP
Sbjct: 6190 CDYVYNP 6196
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 LVCDWTRNP 10
+ CD+ NP
Sbjct: 6130 VTCDYLYNP 6138
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 5 DWTRN 9
DWT+N
Sbjct: 614 DWTKN 618
>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 5 DWTRN 9
DWT+N
Sbjct: 614 DWTKN 618
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 2 LVCDW 6
L CDW
Sbjct: 253 LSCDW 257
>sp|U23_HHV6U|GLYCOPROTEIN U23|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 VLVCDWTR 8
V++C+W +
Sbjct: 202 VILCNWYK 209
12|SequenceR|65|56|SNRPNVLVCD
>sp|PP71_HCMVM|PROTEIN pp71|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 NRPNVLVC 9
+RP+VL C
Sbjct: 65 SRPSVLCC 72
>sp|PP71_HCMVA|PROTEIN pp71|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 NRPNVLVC 9
+RP+VL C
Sbjct: 65 SRPSVLCC 72
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 RPNVLVC 9
+PN L+C
Sbjct: 377 KPNALLC 383
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 3 RPNVLVC 9
+PN L+C
Sbjct: 377 KPNALLC 383
>sp|NS8A_SARS|ORF8A protein|Severe acute respiratory syndrome coronavirus
Query: 1 SNRPNVL 7
SN+P+VL
Sbjct: 25 SNKPHVL 31
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 2 NRPNVLV 8
NR NVLV
Sbjct: 812 NRDNVLV 818
>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)
Query: 2 NRPNVLV 8
NR NVLV
Sbjct: 813 NRENVLV 819
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 NRPNVLV 8
NR NVLV
Sbjct: 812 NRDNVLV 818
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 2 NRPNVL 7
N PNVL
Sbjct: 861 NNPNVL 866
>sp|VE2_HPV49|REGULATORY protein E2|Human papillomavirus type 49
Query: 4 PNVLVC 9
PN+L C
Sbjct: 414 PNILKC 419
>sp|NEC2_HCMVA|NUCLEAR egress protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PNVLVCD 10
PN VCD
Sbjct: 38 PNYSVCD 44
>sp|NEC2_HCMVM|NUCLEAR egress protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PNVLVCD 10
PN VCD
Sbjct: 38 PNYSVCD 44
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 SNRPNVLVC 9
+N N++VC
Sbjct: 1611 NNTKNIIVC 1619
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 SNRPNVLVC 9
+N N++VC
Sbjct: 1611 NNTKNIIVC 1619
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 PNVLVC 9
PN +VC
Sbjct: 6288 PNAVVC 6293
13|SequenceR|70|61|RFGSQSNRPN
>sp|GCVK_HHV7J|PROBABLE ganciclovir kinase|Human herpesvirus 7 (strain JI)
Query: 2 FGSQSNRPN 10
FGS++ RPN
Sbjct: 38 FGSENIRPN 46
>sp|GAG_FOAMV|GAG polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 3 GSQSNRPN 10
GSQ+ RPN
Sbjct: 572 GSQTPRPN 579
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 3 GSQSNRP 9
GSQS RP
Sbjct: 312 GSQSKRP 318
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 3 GSQSNRP 9
GSQS RP
Sbjct: 312 GSQSKRP 318
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 3 GSQSNRP 9
GSQS RP
Sbjct: 312 GSQSKRP 318
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 2 FGSQSNRPN 10
FGS +N P+
Sbjct: 202 FGSYTNLPH 210
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 2 FGSQSNRPN 10
FGS +N P+
Sbjct: 171 FGSYTNLPH 179
>sp|HBSAG_HBVA3|LARGE envelope protein|Hepatitis B virus genotype A2
Query: 2 FGSQSNRPN 10
FG+ SN P+
Sbjct: 34 FGANSNNPD 42
>sp|HBSAG_HBVA7|LARGE envelope protein|Hepatitis B virus genotype A2
Query: 2 FGSQSNRPN 10
FG+ SN P+
Sbjct: 34 FGANSNNPD 42
>sp|HBSAG_HBVC9|LARGE envelope protein|Hepatitis B virus genotype C
Query: 2 FGSQSNRPN 10
FG+ SN P+
Sbjct: 34 FGANSNNPD 42
>sp|HBSAG_HBVA5|LARGE envelope protein|Hepatitis B virus genotype A1
Query: 2 FGSQSNRPN 10
FG+ SN P+
Sbjct: 34 FGANSNNPD 42
>sp|HBSAG_HBVA4|LARGE envelope protein|Hepatitis B virus genotype A2
Query: 2 FGSQSNRPN 10
FG+ SN P+
Sbjct: 34 FGANSNNPD 42
>sp|HBSAG_HBVC8|LARGE envelope protein|Hepatitis B virus genotype C
Query: 2 FGSQSNRPN 10
FG+ SN P+
Sbjct: 23 FGANSNNPD 31
>sp|HBSAG_HBVC4|LARGE envelope protein|Hepatitis B virus genotype C
Query: 2 FGSQSNRPN 10
FG+ SN P+
Sbjct: 34 FGANSNNPD 42
>sp|HBSAG_HBVC0|LARGE envelope protein|Hepatitis B virus genotype C
Query: 2 FGSQSNRPN 10
FG+ SN P+
Sbjct: 34 FGANSNNPD 42
>sp|HBSAG_HBVA9|LARGE envelope protein|Hepatitis B virus genotype A3
Query: 2 FGSQSNRPN 10
FG+ SN P+
Sbjct: 34 FGANSNNPD 42
>sp|HBSAG_HBVA8|LARGE envelope protein|Hepatitis B virus genotype A3
Query: 2 FGSQSNRPN 10
FG+ SN P+
Sbjct: 34 FGANSNNPD 42
>sp|HBSAG_HBVA1|LARGE envelope protein|Hepatitis B virus genotype A1
Query: 2 FGSQSNRPN 10
FG+ SN P+
Sbjct: 34 FGANSNNPD 42
>sp|HBSAG_HBVC7|LARGE envelope protein|Hepatitis B virus genotype C
Query: 2 FGSQSNRPN 10
FG+ SN P+
Sbjct: 34 FGANSNNPD 42
>sp|HBSAG_HBVC5|LARGE envelope protein|Hepatitis B virus genotype C
Query: 2 FGSQSNRPN 10
FG+ SN P+
Sbjct: 34 FGANSNNPD 42
>sp|HBSAG_HBVC2|LARGE envelope protein|Hepatitis B virus genotype C
Query: 2 FGSQSNRPN 10
FG+ SN P+
Sbjct: 34 FGANSNNPD 42
>sp|HBSAG_HBVCJ|LARGE envelope protein|Hepatitis B virus genotype C
Query: 2 FGSQSNRPN 10
FG+ SN P+
Sbjct: 34 FGANSNNPD 42
>sp|HBSAG_HBVC1|LARGE envelope protein|Hepatitis B virus genotype C
Query: 2 FGSQSNRPN 10
FG+ SN P+
Sbjct: 34 FGANSNNPD 42
14|SequenceR|75|66|ELQFLRFGSQ
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 3 QFLRFGS 9
QFLRFG+
Sbjct: 659 QFLRFGT 665
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 3 QFLRFGS 9
QFLRFG+
Sbjct: 659 QFLRFGT 665
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 3 QFLRFGS 9
QFLRFG+
Sbjct: 659 QFLRFGT 665
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 ELQFLRFG 8
+LQ LRFG
Sbjct: 1521 QLQMLRFG 1528
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 ELQFLRFG 8
+LQ LRFG
Sbjct: 1607 QLQMLRFG 1614
>sp|VU54_HHV7J|PROTEIN U54|Human herpesvirus 7 (strain JI)
Query: 3 QFLRFGSQ 10
QF+ +GSQ
Sbjct: 127 QFILYGSQ 134
>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)
Query: 3 QFLRFG 8
Q+LRFG
Sbjct: 645 QYLRFG 650
15|SequenceR|80|71|ADAELELQFL
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 2 DAELELQ 8
DAE+ELQ
Sbjct: 209 DAEVELQ 215
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 DAELELQFL 10
+AE E+QFL
Sbjct: 1055 EAEGEVQFL 1063
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ADAELEL 7
A+AELEL
Sbjct: 878 AEAELEL 884
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ADAELEL 7
A+AELEL
Sbjct: 879 AEAELEL 885
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ADAELEL 7
A+AELEL
Sbjct: 889 AEAELEL 895
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ADAELEL 7
A+AELEL
Sbjct: 883 AEAELEL 889
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ADAELEL 7
A+AELEL
Sbjct: 879 AEAELEL 885
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ADAELEL 7
A+AELEL
Sbjct: 879 AEAELEL 885
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 4 ELELQF 9
E+ELQF
Sbjct: 1123 EIELQF 1128
16|SequenceR|85|76|HFNVLADAEL
>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)
Query: 1 HFNVLADAE 9
HF VLAD+E
Sbjct: 581 HFCVLADSE 589
>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)
Query: 1 HFNVLADAE 9
HF VLAD+E
Sbjct: 581 HFCVLADSE 589
>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)
Query: 1 HFNVLADAE 9
HF VLAD+E
Sbjct: 581 HFCVLADSE 589
>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 HFNVLADAE 9
HF VLAD+E
Sbjct: 581 HFCVLADSE 589
>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 HFNVLADAE 9
HF VLAD+E
Sbjct: 581 HFCVLADSE 589
>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)
Query: 1 HFNVLADAE 9
HF VLA++E
Sbjct: 581 HFCVLANSE 589
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 FNVLADAEL 10
F+VLAD+ L
Sbjct: 1041 FSVLADSVL 1049
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 FNVLADAEL 10
F+VLAD+ L
Sbjct: 1041 FSVLADSVL 1049
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 FNVLADAEL 10
F+VLAD+ L
Sbjct: 1041 FSVLADSVL 1049
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 HFNVLADAE 9
FN+ +DAE
Sbjct: 1156 QFNLSSDAE 1164
17|SequenceR|90|81|QSSYQHFNVL
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 1 QSSYQHFNV 9
+S QHFNV
Sbjct: 333 RSVSQHFNV 341
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 1 QSSYQHFNV 9
+S QHFNV
Sbjct: 333 RSVSQHFNV 341
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 1 QSSYQHF 7
Q SY HF
Sbjct: 591 QDSYAHF 597
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 3 SYQHFNVL 10
SYQHF L
Sbjct: 4 SYQHFRKL 11
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 3 SYQHFNVL 10
SYQHF L
Sbjct: 4 SYQHFRKL 11
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 3 SYQHFNVL 10
SYQHF L
Sbjct: 4 SYQHFRKL 11
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 3 SYQHFNVL 10
SYQHF L
Sbjct: 4 SYQHFRKL 11
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 3 SYQHFNVL 10
SYQHF L
Sbjct: 4 SYQHFRKL 11
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 3 SYQHFNVL 10
SYQHF L
Sbjct: 4 SYQHFRKL 11
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 3 SYQHFNVL 10
SYQHF L
Sbjct: 4 SYQHFRKL 11
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 1 QSSYQHF 7
Q SY HF
Sbjct: 521 QESYAHF 527
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 3 SYQHFNVL 10
SYQHF L
Sbjct: 4 SYQHFRRL 11
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 3 SYQHFNVL 10
SYQHF L
Sbjct: 4 SYQHFRKL 11
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 3 SYQHFNVL 10
SYQHF L
Sbjct: 4 SYQHFRKL 11
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 3 SYQHFNVL 10
SYQHF L
Sbjct: 4 SYQHFRKL 11
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 3 SYQHFNVL 10
SYQHF L
Sbjct: 4 SYQHFRKL 11
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 3 SYQHFNVL 10
SYQHF L
Sbjct: 4 SYQHFRKL 11
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 3 SYQHFNVL 10
SYQHF L
Sbjct: 4 SYQHFRKL 11
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 3 SYQHFNVL 10
SYQHF L
Sbjct: 4 SYQHFRRL 11
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 3 SYQHFNVL 10
SYQHF L
Sbjct: 4 SYQHFRKL 11
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 3 SYQHFNVL 10
SYQHF L
Sbjct: 4 SYQHFRKL 11
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 3 SYQHFNVL 10
SYQHF L
Sbjct: 4 SYQHFRKL 11
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 3 SYQHFNVL 10
SYQHF L
Sbjct: 4 SYQHFRKL 11
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 3 SYQHFNVL 10
SYQHF L
Sbjct: 4 SYQHFRKL 11
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 3 SYQHFNVL 10
SYQHF L
Sbjct: 4 SYQHFRKL 11
>sp|GP_PUUMU|ENVELOPE glycoprotein|Puumala virus (strain Udmurtia/894CG/91)
Query: 1 QSSYQHFNV 9
+ S+Q FNV
Sbjct: 18 KDSFQSFNV 26
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 QSSYQHFNV 9
+ S+Q FNV
Sbjct: 930 KDSFQSFNV 938
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 1 QSSYQHFNV 9
+ S+Q FNV
Sbjct: 930 KDSFQSFNV 938
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 1 QSSYQHFNV 9
+ S+Q FNV
Sbjct: 930 KDSFQSFNV 938
>sp|GP_PUUMB|ENVELOPE glycoprotein|Puumala virus (strain Berkel)
Query: 1 QSSYQHFNV 9
+ S+Q FNV
Sbjct: 115 KDSFQSFNV 123
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 1 QSSYQHFNV 9
+ S+Q FNV
Sbjct: 926 KDSFQSFNV 934
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 3 SYQHFNVL 10
SYQHF L
Sbjct: 4 SYQHFRKL 11
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 3 SYQHFNVL 10
SYQHF L
Sbjct: 4 SYQHFRKL 11
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 3 SYQHFNVL 10
SYQHF L
Sbjct: 4 SYQHFRKL 11
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 3 SYQHFNVL 10
SYQHF L
Sbjct: 4 SYQHFRKL 11
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 QSSYQHFNV 9
+ S+Q FNV
Sbjct: 930 KDSFQSFNV 938
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 3 SYQHFNVL 10
SYQHF L
Sbjct: 4 SYQHFRRL 11
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 3 SYQHFNVL 10
SYQHF L
Sbjct: 4 SYQHFRRL 11
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 3 SYQHFNVL 10
SYQHF L
Sbjct: 4 SYQHFRRL 11
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 3 SYQHFNVL 10
SYQHF L
Sbjct: 4 SYQHFRKL 11
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 3 SYQHFNVL 10
SYQHF L
Sbjct: 4 SYQHFRRL 11
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 3 SYQHFNVL 10
SYQHF L
Sbjct: 4 SYQHFRRL 11
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 3 SYQHFNVL 10
SYQHF L
Sbjct: 4 SYQHFRRL 11
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 3 SYQHFNVL 10
SYQHF L
Sbjct: 4 SYQHFRKL 11
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 3 SYQHFNVL 10
SYQHF L
Sbjct: 4 SYQHFRRL 11
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 3 SYQHFNVL 10
SYQHF L
Sbjct: 4 SYQHFRRL 11
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 QSSYQHFNV 9
+ S+Q FNV
Sbjct: 924 RDSFQSFNV 932
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 1 QSSYQHFNV 9
+ S+Q FNV
Sbjct: 924 RDSFQSFNV 932
>sp|VP30_MABVM|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 QSSYQHF 7
Q+SY HF
Sbjct: 265 QASYDHF 271
>sp|VP30_MABVA|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 QSSYQHF 7
Q+SY HF
Sbjct: 265 QASYDHF 271
>sp|VP30_MABVO|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 QSSYQHF 7
Q+SY HF
Sbjct: 265 QASYDHF 271
>sp|VP30_MABVP|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 QSSYQHF 7
Q+SY HF
Sbjct: 265 QASYDHF 271
>sp|VE6_HPV58|PROTEIN E6|Human papillomavirus 58
Query: 2 SSYQHFN 8
S Y+H+N
Sbjct: 74 SEYRHYN 80
>sp|VP30_MABVR|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 QSSYQHF 7
Q+SY HF
Sbjct: 265 QASYDHF 271
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 QSSYQHFNV 9
+ S+Q FN+
Sbjct: 925 KDSFQSFNI 933
>sp|VE6_HPV33|PROTEIN E6|Human papillomavirus 33
Query: 2 SSYQHFN 8
S Y+H+N
Sbjct: 74 SEYRHYN 80
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 3 SYQHFNVL 10
SYQHF +
Sbjct: 4 SYQHFRKM 11
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 QSSYQHFN 8
+S+Y++FN
Sbjct: 1132 KSAYENFN 1139
>sp|VE6_HPV11|PROTEIN E6|Human papillomavirus 11
Query: 2 SSYQHFN 8
+ Y+HFN
Sbjct: 75 NQYRHFN 81
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 3 SYQHF 7
SYQHF
Sbjct: 4 SYQHF 8
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 3 SYQHFN 8
SYQHF
Sbjct: 4 SYQHFR 9
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 3 SYQHFN 8
SYQHF
Sbjct: 4 SYQHFR 9
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 3 SYQHFN 8
SYQHF
Sbjct: 4 SYQHFR 9
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 3 SYQHFNVL 10
SYQ FN L
Sbjct: 2029 SYQEFNDL 2036
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 SYQHFNVL 10
SYQ FN L
Sbjct: 2029 SYQEFNDL 2036
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 3 SYQHFN 8
SYQHF
Sbjct: 4 SYQHFR 9
>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 3 SYQHFN 8
SYQ FN
Sbjct: 22 SYQSFN 27
>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas)
Query: 3 SYQHFN 8
SYQ FN
Sbjct: 22 SYQSFN 27
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 QSSYQHFN 8
+S+Y++FN
Sbjct: 1132 KSAYENFN 1139
>sp|VE6_HPV43|PROTEIN E6|Human papillomavirus 43
Query: 2 SSYQHFN 8
S Y+HF+
Sbjct: 75 SQYRHFD 81
18|SequenceR|95|86|YFPLLQSSYQ
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 3 PLLQSSYQ 10
P LQS YQ
Sbjct: 257 PKLQSMYQ 264
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 YFPLLQSS 8
++P LQSS
Sbjct: 6793 FYPKLQSS 6800
>sp|VE2_HPV42|REGULATORY protein E2|Human papillomavirus 42
Query: 4 LLQSSY 9
LLQSSY
Sbjct: 82 LLQSSY 87
>sp|SCAF_HHV7J|CAPSID scaffolding protein|Human herpesvirus 7 (strain JI)
Query: 2 FPLLQSSYQ 10
FP LQS Q
Sbjct: 206 FPKLQSDKQ 214
19|SequenceR|100|91|QPSSEYFPLL
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 1 QPSSEYFP 8
+PS YFP
Sbjct: 79 RPSVSYFP 86
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 5 EYFPLL 10
EY+PLL
Sbjct: 3741 EYYPLL 3746
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 EYFPLL 10
EY+PLL
Sbjct: 3741 EYYPLL 3746
>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35
Query: 2 PSSEYFP 8
PS+ YFP
Sbjct: 285 PSTSYFP 291
>sp|MATRX_RABVB|MATRIX protein|Rabies virus (strain silver-haired bat-associated)
Query: 2 PSSEYFPL 9
P EY PL
Sbjct: 34 PPPEYIPL 41
>sp|GM_HHV8P|ENVELOPE glycoprotein M|Human herpesvirus 8 type P
Query: 2 PSSEYFPL 9
PS+ Y PL
Sbjct: 333 PSAAYMPL 340
>sp|K81_HHV8P|PROTEIN K8.1|Human herpesvirus 8 type P
Query: 2 PSSEY 6
PSSEY
Sbjct: 79 PSSEY 83
20|SequenceR|105|96|ETHLVQPSSE
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 ETHLVQPSS 9
E H + P+S
Sbjct: 1785 EAHFIDPAS 1793
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 ETHLVQPSS 9
E H PSS
Sbjct: 1784 EAHFTDPSS 1792
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 ETHLVQPSS 9
E H PSS
Sbjct: 1788 EAHFTDPSS 1796
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 ETHLVQPSS 9
E H PSS
Sbjct: 1788 EAHFTDPSS 1796
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 1 ETHLVQP 7
+TH+V+P
Sbjct: 70 KTHIVKP 76
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate
Query: 1 ETHLVQP 7
+TH+V+P
Sbjct: 70 KTHIVKP 76
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 ETHLVQP 7
+TH+V+P
Sbjct: 70 KTHIVKP 76
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 THLVQPS 8
TH QPS
Sbjct: 628 THFSQPS 634
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 ETHLVQP 7
+TH+V+P
Sbjct: 70 KTHIVKP 76
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 1 ETHLVQP 7
+TH+V+P
Sbjct: 70 KTHIVKP 76
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 ETHLVQPSS 9
E H PSS
Sbjct: 1759 EAHFTDPSS 1767
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 2 THLVQPS 8
TH QPS
Sbjct: 628 THFSQPS 634
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 ETHLVQP 7
ETH QP
Sbjct: 1598 ETHQCQP 1604
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 ETHLVQPSS 9
E H PSS
Sbjct: 1759 EAHFTDPSS 1767
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 ETHLVQPSS 9
E H PSS
Sbjct: 1759 EAHFTDPSS 1767
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 ETHLVQPSS 9
E H PSS
Sbjct: 1759 EAHFTDPSS 1767
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 ETHLVQPSS 9
E H PSS
Sbjct: 1759 EAHFTDPSS 1767
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 ETHLVQP 7
ETH QP
Sbjct: 1600 ETHQCQP 1606
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 ETHLVQP 7
ETH QP
Sbjct: 1600 ETHQCQP 1606
>sp|VL2_HPV41|MINOR capsid protein L2|Human papillomavirus type 41
Query: 2 THLVQPSS 9
TH+V P+S
Sbjct: 489 THIVYPTS 496
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 2 THLVQPS 8
TH QPS
Sbjct: 628 THFSQPS 634
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 THLVQPS 8
TH QPS
Sbjct: 628 THFSQPS 634
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 1 ETHLVQP 7
THL QP
Sbjct: 97 NTHLFQP 103
>sp|ORF5_MERS1|NON-STRUCTURAL protein ORF5|Middle East respiratory syndrome-related coronavirus
Query: 3 HLVQPSS 9
H++ PSS
Sbjct: 215 HIIAPSS 221
>sp|ITP_HHV7J|INNER tegument protein|Human herpesvirus 7 (strain JI)
Query: 2 THLVQPS 8
TH V+PS
Sbjct: 556 THYVRPS 562
>sp|TAT_HV2G1|PROTEIN Tat|Human immunodeficiency virus type 2
Query: 1 ETHLVQPSS 9
ETHL P S
Sbjct: 2 ETHLKAPES 10
>sp|VIF_HV1ND|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 HLVQPSSE 10
H+V PS E
Sbjct: 127 HIVSPSCE 134
21|SequenceR|110|101|LHQLVETHLV
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 LHQLVETHLV 10
LH VETHL+
Sbjct: 318 LHDYVETHLL 327
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LHQLVETHLV 10
LH VETHL+
Sbjct: 318 LHDYVETHLL 327
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LHQLVETHLV 10
LH VETHL+
Sbjct: 318 LHDYVETHLL 327
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 QLVETHLV 10
Q+V+ HLV
Sbjct: 102 QIVQRHLV 109
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 QLVETHLV 10
Q+V+ HLV
Sbjct: 102 QIVQRHLV 109
>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 QLVETHLV 10
Q+V+ HLV
Sbjct: 102 QIVQRHLV 109
>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 QLVETHLV 10
Q+V+ HLV
Sbjct: 102 QIVQRHLV 109
>sp|VE2_HPV35|REGULATORY protein E2|Human papillomavirus 35
Query: 1 LHQLVETHLV 10
+HQ VET+ V
Sbjct: 161 VHQGVETYYV 170
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 2 HQLVETH 8
H LV TH
Sbjct: 1143 HSLVATH 1149
>sp|MATRX_PI4HB|MATRIX protein|Human parainfluenza 4b virus (strain
Query: 1 LHQLVETH 8
+H L E H
Sbjct: 10 IHNLAEAH 17
>sp|MATRX_PI4HA|MATRIX protein|Human parainfluenza 4a virus (strain
Query: 1 LHQLVETH 8
+H L E H
Sbjct: 10 IHNLAEAH 17
22|SequenceR|115|106|RILDTLHQLV
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 ILDTLHQL 9
+LD+LH+L
Sbjct: 1380 LLDSLHRL 1387
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 ILDTLHQL 9
+LD+LH+L
Sbjct: 1380 LLDSLHRL 1387
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 ILDTLHQL 9
+LD+LH+L
Sbjct: 1380 LLDSLHRL 1387
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 RILDTLHQLV 10
R+ DT+ Q+V
Sbjct: 1225 RLRDTIQQIV 1234
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 RILDTLHQLV 10
R+ DT+ Q+V
Sbjct: 1198 RLRDTIQQIV 1207
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 RILDTLHQLV 10
R+ DT+ Q+V
Sbjct: 1203 RLRDTIQQIV 1212
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 1 RILDTL 6
RILDTL
Sbjct: 614 RILDTL 619
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 RILDTL 6
RILDTL
Sbjct: 614 RILDTL 619
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 3 LDTLHQL 9
+DTLH L
Sbjct: 1164 IDTLHDL 1170
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 3 LDTLHQL 9
+DTLH L
Sbjct: 1171 IDTLHDL 1177
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 3 LDTLHQL 9
+DTLH L
Sbjct: 1171 IDTLHDL 1177
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 3 LDTLHQL 9
+DTLH L
Sbjct: 1167 IDTLHDL 1173
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 RILDTLHQL 9
RIL TL+ L
Sbjct: 490 RILQTLYNL 498
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 1 RILDTLHQL 9
RIL TL+ L
Sbjct: 490 RILQTLYNL 498
>sp|VP35_EBORR|POLYMERASE cofactor VP35|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 ILDTLH 7
+LDT+H
Sbjct: 244 LLDTIH 249
>sp|VP35_EBORE|POLYMERASE cofactor VP35|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 ILDTLH 7
+LDT+H
Sbjct: 244 LLDTIH 249
23|SequenceR|120|111|WSPHNRILDT
>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)
Query: 1 WSPHNRI 7
W+PH R+
Sbjct: 75 WTPHARV 81
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 WSPHNRIL 8
WSP R+L
Sbjct: 1212 WSPKQRVL 1219
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 1 WSPHNRILD 9
W+ HN +LD
Sbjct: 320 WAFHNHLLD 328
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 SPHNRIL 8
+PH+RIL
Sbjct: 3045 APHHRIL 3051
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 SPHNRILD 9
S H+R+LD
Sbjct: 753 SDHDRLLD 760
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 SPHNRILD 9
S H+R+LD
Sbjct: 753 SDHDRLLD 760
>sp|KBTB1_VACCC|KELCH repeat and BTB domain-containing|Vaccinia virus (strain Copenhagen)
Query: 1 WSPHNRI 7
WS HN++
Sbjct: 488 WSAHNKL 494
>sp|KBTB1_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 1 WSPHNRI 7
WS HN++
Sbjct: 488 WSAHNKL 494
>sp|KBTB1_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 1 WSPHNRI 7
WS HN++
Sbjct: 488 WSAHNKL 494
>sp|PRO_ADE05|PROTEASE adenovirus C serotype 5
Query: 1 WSPHNR 6
W+PH++
Sbjct: 60 WNPHSK 65
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 1 WSPHNRI 7
+SPH R+
Sbjct: 1621 YSPHRRV 1627
>sp|KBTB1_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 1 WSPHNRI 7
WS HN++
Sbjct: 488 WSTHNKL 494
>sp|VPK2_VAR67|SERINE/THREONINE-PROTEIN kinase 2|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 WSPHNRILD 9
W+P R+L+
Sbjct: 44 WAPSVRLLN 52
>sp|US12_HCMVM|UNCHARACTERIZED protein US12|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 WSPHNRIL 8
W P+ RI+
Sbjct: 193 WEPYQRII 200
>sp|US12_HCMVA|UNCHARACTERIZED protein HVLF6|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 WSPHNRIL 8
W P+ RI+
Sbjct: 193 WEPYQRII 200
>sp|VPK2_VACCA|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Ankara) (VACV)
Query: 1 WSPHNRILD 9
W+P R+L+
Sbjct: 44 WAPSVRLLN 52
>sp|VPK2_VACCC|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 WSPHNRILD 9
W+P R+L+
Sbjct: 44 WAPSVRLLN 52
>sp|VPK2_MONPV|SERINE/THREONINE-PROTEIN kinase 2|Monkeypox virus (MPXV)
Query: 1 WSPHNRILD 9
W+P R+L+
Sbjct: 44 WAPSVRLLN 52
>sp|SPIKE_ADE05|FIBER protein|Human adenovirus C serotype 5
Query: 1 WSPHNRI 7
WS HN I
Sbjct: 558 WSGHNYI 564
>sp|P100_HHV7J|LARGE structural phosphoprotein|Human herpesvirus 7 (strain JI)
Query: 1 WSPHNRILD 9
W+P + +LD
Sbjct: 588 WTPSSSLLD 596
>sp|U20_HHV6Z|GLYCOPROTEIN U20|Human herpesvirus 6B (strain Z29)
Query: 1 WSPHNRIL 8
WS HN+ +
Sbjct: 223 WSLHNQTV 230
>sp|NEC2_EBVB9|NUCLEAR egress protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 SPHNRILD 9
SP R+LD
Sbjct: 3 SPEERLLD 10
>sp|GLYCO_RABVT|GLYCOPROTEIN virus (isolate Human/Algeria/1991) (RABV)
Query: 1 WSPHNRILDT 10
W P N L+T
Sbjct: 197 WMPENPRLET 206
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 WSPHNR 6
W P NR
Sbjct: 1956 WEPFNR 1961
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 WSPHNR 6
W P NR
Sbjct: 1956 WEPFNR 1961
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 WSPHNR 6
W P NR
Sbjct: 1956 WEPFNR 1961
>sp|NCAP_PIARV|NUCLEOPROTEIN mammarenavirus (PICV) (Pichind mammarenavirus)
Query: 2 SPHNRILDT 10
+PH +LDT
Sbjct: 518 NPHCALLDT 526
24|SequenceR|125|116|LHAVSWSPHN
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 3 AVSWSPH 9
V+WSPH
Sbjct: 122 GVNWSPH 128
>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 3 AVSWSPH 9
V+WSPH
Sbjct: 116 GVNWSPH 122
>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 3 AVSWSPH 9
V+WSPH
Sbjct: 116 GVNWSPH 122
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 3 AVSWSPH 9
V+WSPH
Sbjct: 116 GVNWSPH 122
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 3 AVSWSPH 9
V+WSPH
Sbjct: 116 GVNWSPH 122
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 3 AVSWSPH 9
V+WSPH
Sbjct: 116 GVNWSPH 122
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 3 AVSWSPH 9
V+WSPH
Sbjct: 122 GVNWSPH 128
>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)
Query: 3 AVSWSPH 9
V+WSPH
Sbjct: 115 GVNWSPH 121
>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)
Query: 3 AVSWSPH 9
V+WSPH
Sbjct: 116 GVNWSPH 122
>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)
Query: 3 AVSWSPH 9
V+WSPH
Sbjct: 115 GVNWSPH 121
>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 3 AVSWSPH 9
V+WSPH
Sbjct: 129 GVNWSPH 135
>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 3 AVSWSPH 9
V+WSPH
Sbjct: 115 GVNWSPH 121
>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great
Query: 3 AVSWSPH 9
V+WSPH
Sbjct: 116 GVNWSPH 122
>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)
Query: 3 AVSWSPH 9
V+WSPH
Sbjct: 116 GVNWSPH 122
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 3 AVSWSPH 9
V+WSPH
Sbjct: 128 GVNWSPH 134
>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann
Query: 3 AVSWSPH 9
V+WSPH
Sbjct: 129 GVNWSPH 135
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 6 WSPH 9
WSPH
Sbjct: 952 WSPH 955
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 3 AVSWSPHN 10
AV+WSP +
Sbjct: 715 AVAWSPED 722
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 2 HAVSWSPH 9
HA+ W P+
Sbjct: 1111 HAIVWFPN 1118
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 2 HAVSWSPHN 10
+AV+W HN
Sbjct: 343 NAVAWLAHN 351
>sp|HEMA_CVHOC|HEMAGGLUTININ-ESTERASE coronavirus OC43 (HCoV-OC43)
Query: 2 HAVSWSPHN 10
H V+ +PHN
Sbjct: 46 HIVNINPHN 54
>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1
Query: 2 HAVSWS 7
HAV+WS
Sbjct: 560 HAVAWS 565
>sp|PRO_ADE40|PROTEASE adenovirus F serotype 40
Query: 3 AVSWSPHN 10
A++W+P N
Sbjct: 57 ALAWNPKN 64
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 2 HAVSWSPHN 10
+AV+W HN
Sbjct: 344 NAVAWLAHN 352
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 2 HAVSWSPHN 10
+AV+W HN
Sbjct: 343 NAVAWLAHN 351
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 2 HAVSWSPHN 10
+AV+W HN
Sbjct: 343 NAVAWLAHN 351
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 2 HAVSWSPHN 10
+AV+W HN
Sbjct: 342 NAVAWLAHN 350
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 2 HAVSWSPHN 10
+AV+W HN
Sbjct: 342 NAVAWLAHN 350
>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain
Query: 4 VSWSPH 9
+ W+PH
Sbjct: 447 IKWAPH 452
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 2 HAVSWSPHN 10
+AV+W HN
Sbjct: 343 NAVAWLAHN 351
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 2 HAVSWSPHN 10
+AV+W HN
Sbjct: 343 NAVAWLAHN 351
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 LHAVSWSPH 9
L AV WS H
Sbjct: 2272 LSAVLWSEH 2280
>sp|U20_HHV6Z|GLYCOPROTEIN U20|Human herpesvirus 6B (strain Z29)
Query: 4 VSWSPHN 10
+ WS HN
Sbjct: 221 IQWSLHN 227
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 5 SWSPH 9
SW PH
Sbjct: 1860 SWFPH 1864
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 2 HAVSWSPHN 10
+AV+W HN
Sbjct: 344 NAVAWLAHN 352
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 4 VSWSPH 9
V+W PH
Sbjct: 626 VTWFPH 631
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 2 HAVSWSPHN 10
+AV+W HN
Sbjct: 345 NAVAWLAHN 353
>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1
Query: 2 HAVSWSPH 9
H SWSP
Sbjct: 350 HGQSWSPQ 357
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 LHAVSWSPH 9
L + +W PH
Sbjct: 1864 LGSFTWFPH 1872
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 1 LHAVSWSPH 9
L + +W PH
Sbjct: 1863 LGSFTWFPH 1871
>sp|VP3_ROTJ1|PROTEIN VP3|Rotavirus X (strain RVX/Human/China/NADRV-J19/1997/GXP[X]) (RV
Query: 1 LHAVSWSPHN 10
L ++W P N
Sbjct: 313 LELITWVPFN 322
>sp|NEC1_VZVD|NUCLEAR egress protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 6 WSPHN 10
WSP N
Sbjct: 34 WSPSN 38
>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)
Query: 5 SWSPH 9
+W+PH
Sbjct: 74 AWTPH 78
>sp|VP3_ROTB2|PROTEIN VP3|Rotavirus X (isolate
Query: 1 LHAVSWSPHN 10
L ++W P N
Sbjct: 313 LELITWVPFN 322
>sp|PRO_ADE05|PROTEASE adenovirus C serotype 5
Query: 3 AVSWSPHN 10
A +W+PH+
Sbjct: 57 AFAWNPHS 64
>sp|KBTB1_VACCC|KELCH repeat and BTB domain-containing|Vaccinia virus (strain Copenhagen)
Query: 6 WSPHN 10
WS HN
Sbjct: 488 WSAHN 492
>sp|KBTB1_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 6 WSPHN 10
WS HN
Sbjct: 488 WSAHN 492
>sp|KBTB1_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 6 WSPHN 10
WS HN
Sbjct: 488 WSAHN 492
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 2 HAVSWSPHN 10
+AV+W HN
Sbjct: 344 NAVAWLAHN 352
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 2 HAVSWSPHN 10
+AV+W HN
Sbjct: 345 NAVAWLAHN 353
>sp|KBTB1_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 6 WSPHN 10
WS HN
Sbjct: 488 WSTHN 492
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 1 LHAVSWSPH 9
LH S PH
Sbjct: 165 LHIYSTQPH 173
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 5 SWSPHN 10
SW P N
Sbjct: 1955 SWEPFN 1960
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 5 SWSPHN 10
SW P N
Sbjct: 1955 SWEPFN 1960
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 1 LHAVSWSPHN 10
++A +W HN
Sbjct: 345 VNATAWLAHN 354
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 5 SWSPHN 10
SW P N
Sbjct: 1955 SWEPFN 1960
25|SequenceR|130|121|GLEVALHAVS
>sp|VE2_HPV66|REGULATORY protein E2|Human papillomavirus 66
Query: 2 LEVALHAVS 10
L++AL A+S
Sbjct: 75 LQIALEAIS 83
>sp|NSS_PTPV|NON-STRUCTURAL protein NS-S|Punta toro phlebovirus
Query: 1 GLEVALH 7
G+E+ LH
Sbjct: 44 GMEIPLH 50
>sp|US8A_HHV2H|PROTEIN US8.5|Human herpesvirus 2 (strain HG52)
Query: 4 VALHAV 9
VALHAV
Sbjct: 102 VALHAV 107
26|SequenceR|135|126|FCERIGLEVA
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 1 FCERIGLE 8
CER+GL+
Sbjct: 144 LCERLGLD 151
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 1 FCERIGLE 8
CER+GL+
Sbjct: 144 LCERLGLD 151
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 FCERIGLE 8
CER+GL+
Sbjct: 144 LCERLGLD 151
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 FCERIGLE 8
CER+GL+
Sbjct: 144 LCERLGLD 151
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 1 FCERIGLE 8
CER+GL+
Sbjct: 144 LCERLGLD 151
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 1 FCERIGLEVA 10
FCE +GL +
Sbjct: 717 FCEELGLTAS 726
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 2 CERIGLE 8
C R+GLE
Sbjct: 142 CTRLGLE 148
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 CERIGLE 8
C R+GLE
Sbjct: 142 CTRLGLE 148
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 1 FCERIGLE 8
+C+R+G E
Sbjct: 515 YCQRLGRE 522
>sp|NSP4_ROTHC|NON-STRUCTURAL glycoprotein 4|Rotavirus C (isolate RVC/Human/United
Query: 2 CERIGLE 8
CE+ GLE
Sbjct: 139 CEKSGLE 145
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 FCERIGLEV 9
+C +IG+ V
Sbjct: 3183 YCRKIGVNV 3191
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 FCERIGLEV 9
+C +IG+ V
Sbjct: 3203 YCRKIGVNV 3211
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 FCERIGLEV 9
+C +IG+ V
Sbjct: 3233 YCRKIGVNV 3241
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 FCERIGLEV 9
+C +IG+ V
Sbjct: 3233 YCRKIGVNV 3241
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 FCERIGLEV 9
+C +IG+ V
Sbjct: 3183 YCRKIGVNV 3191
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 FCERIGLEV 9
+C +IG+ V
Sbjct: 3203 YCRKIGVNV 3211
>sp|VP7_CTFVL|UNCHARACTERIZED protein VP7|Colorado tick fever virus (strain
Query: 1 FCERIGL 7
FC+ +GL
Sbjct: 143 FCQAVGL 149
27|SequenceR|140|131|IRSHHFCERI
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 IRSHHFCERI 10
I S FCE+I
Sbjct: 250 ISSKDFCEKI 259
>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)
Query: 1 IRSHHFCER 9
+R HFCE+
Sbjct: 430 LRVVHFCEK 438
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 2 RSHHF--CE 8
R+HHF CE
Sbjct: 1239 RNHHFQQCE 1247
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 2 RSHHF--CE 8
R+HHF CE
Sbjct: 1239 RNHHFQQCE 1247
>sp|MATRX_PI2HT|MATRIX protein|Human parainfluenza 2 virus (strain
Query: 1 IRSHHFCER 9
+R H C+R
Sbjct: 135 LREHALCKR 143
>sp|EAD_EBVG|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 2 RSHHFC 7
+SHH C
Sbjct: 138 KSHHTC 143
>sp|EAD_EBVB9|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 2 RSHHFC 7
+SHH C
Sbjct: 138 KSHHTC 143
>sp|EAD_EBVA8|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 2 RSHHFC 7
+SHH C
Sbjct: 138 KSHHTC 143
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 RSHHFC 7
R H FC
Sbjct: 5043 RKHEFC 5048
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 RSHHFC 7
R H FC
Sbjct: 5063 RKHEFC 5068
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 RSHHFC 7
R H FC
Sbjct: 5093 RKHEFC 5098
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 5 HFCE 8
HFCE
Sbjct: 228 HFCE 231
>sp|VP10_CTFVL|MICROTUBULE-ASSOCIATED protein VP10|Colorado tick fever virus (strain
Query: 5 HFCER 9
HFC R
Sbjct: 104 HFCTR 108
>sp|GLYC_LYCVA|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 1 IRSHHFC 7
I SH+FC
Sbjct: 117 IISHNFC 123
>sp|OBP_HHV6U|REPLICATION origin-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 6 FCERI 10
FCERI
Sbjct: 557 FCERI 561
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 2 RSHHFCE 8
RS+ +CE
Sbjct: 154 RSYFYCE 160
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 2 RSHHFCE 8
RS+ +CE
Sbjct: 154 RSYFYCE 160
>sp|GM_HHV11|ENVELOPE glycoprotein M|Human herpesvirus 1 (strain 17)
Query: 5 HFCER 9
HFC R
Sbjct: 182 HFCTR 186
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 4 HHFCER 9
HH C R
Sbjct: 479 HHSCSR 484
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 4 HHFCER 9
HH C R
Sbjct: 479 HHSCSR 484
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 4 HHFCER 9
HH C R
Sbjct: 479 HHSCSR 484
28|SequenceR|145|136|NACSIIRSHH
>sp|GLYC_LYCVW|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 1 NACSIIRSHH 10
NACS+ SHH
Sbjct: 90 NACSVNNSHH 99
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 1 NACSIIRS 8
NACS IRS
Sbjct: 1488 NACSKIRS 1495
>sp|GLYC_LYCVA|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 1 NACSIIRSHH 10
NACS SHH
Sbjct: 90 NACSANNSHH 99
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 1 NACSIIRSH 9
N CSI R H
Sbjct: 536 NPCSIDRKH 544
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 1 NACSIIRSH 9
N CSI R H
Sbjct: 537 NPCSIDRKH 545
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 1 NACSIIRSH 9
N CSI R H
Sbjct: 529 NPCSIDRKH 537
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 NACSIIRS 8
+ACS IRS
Sbjct: 1491 DACSKIRS 1498
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 CSIIRSH 9
C IIR H
Sbjct: 1506 CDIIRVH 1512
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 2 ACSIIRS 8
AC IIR+
Sbjct: 309 ACDIIRA 315
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 2 ACSIIRS 8
AC IIR+
Sbjct: 309 ACDIIRA 315
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 2 ACSIIRS 8
AC IIR+
Sbjct: 309 ACDIIRA 315
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 2 ACSIIRS 8
AC IIR+
Sbjct: 309 ACDIIRA 315
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 1 NACSIIRSH 9
N C I R H
Sbjct: 529 NPCCIDRKH 537
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 3 CSIIRSH 9
C I+R H
Sbjct: 1506 CDIVRVH 1512
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 CSIIRSH 9
C I+R H
Sbjct: 1506 CDIVRVH 1512
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 CSIIRSH 9
C I+R H
Sbjct: 1506 CDIVRVH 1512
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 1 NACSIIRSH 9
N C I R H
Sbjct: 533 NPCCIDRKH 541
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 ACSIIRSH 9
AC ++ SH
Sbjct: 2516 ACRLVPSH 2523
29|SequenceR|150|141|ENEACNACSI
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 ENEACNAC 8
EN CN C
Sbjct: 4020 ENNVCNVC 4027
>sp|MATRX_MEASY|MATRIX protein|Measles virus (strain Yamagata-1) (MeV)
Query: 2 NEACNACSI 10
N+ACNA ++
Sbjct: 88 NQACNAVNL 96
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 ENEACNAC 8
EN CN C
Sbjct: 4020 ENNVCNVC 4027
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 ENEACNAC 8
ENE NAC
Sbjct: 370 ENEGDNAC 377
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 ENEACNAC 8
ENE NAC
Sbjct: 370 ENEGDNAC 377
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 ENEACNAC 8
ENE NAC
Sbjct: 370 ENEGDNAC 377
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 ENEACNAC 8
ENE NAC
Sbjct: 370 ENEGDNAC 377
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 ENEACNAC 8
ENE NAC
Sbjct: 370 ENEGDNAC 377
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 ENEACNAC 8
ENE NAC
Sbjct: 370 ENEGDNAC 377
>sp|MB43_VZVO|MEMBRANE protein UL43 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 3 EACNACSI 10
+ CN+C+I
Sbjct: 35 QECNSCAI 42
>sp|MB43_VZVD|MEMBRANE protein UL43 homolog|Varicella-zoster virus (strain Dumas)
Query: 3 EACNACSI 10
+ CN+C+I
Sbjct: 35 QECNSCAI 42
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 2 NEACNA 7
N+ACNA
Sbjct: 1108 NDACNA 1113
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 2 NEACNA 7
N+ACNA
Sbjct: 1109 NDACNA 1114
>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1
Query: 3 EACNAC 8
+ CNAC
Sbjct: 464 DTCNAC 469
>sp|UL32_HHV6U|PACKAGING protein UL32|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 CNACSI 10
CN CSI
Sbjct: 74 CNICSI 79
>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2
Query: 3 EACNAC 8
+AC+AC
Sbjct: 466 DACDAC 471
>sp|RIR1_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus
Query: 1 ENEACNACS 9
++E C +CS
Sbjct: 762 DSEICTSCS 770
>sp|RIR1_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus (isolate
Query: 1 ENEACNACS 9
++E C +CS
Sbjct: 762 DSEICTSCS 770
>sp|UL32_HHV6Z|PACKAGING protein UL32 homolog|Human herpesvirus 6B (strain Z29)
Query: 5 CNACSI 10
CN CSI
Sbjct: 74 CNICSI 79
>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 ENEACNACS 9
++E C +CS
Sbjct: 762 DSEICTSCS 770
>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 1 ENEACNACS 9
++E C +CS
Sbjct: 762 DSEICTSCS 770
>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)
Query: 1 ENEACNACS 9
++E C +CS
Sbjct: 762 DSEICTSCS 770
>sp|VGP3_EBVP3|ENVELOPE glycoprotein GP340|Epstein-Barr virus (strain P3HR-1) (HHV-4)
Query: 4 ACNACS 9
ACN C+
Sbjct: 38 ACNVCT 43
>sp|GP350_EBVA8|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 ACNACS 9
ACN C+
Sbjct: 38 ACNVCT 43
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 EACNACSI 10
E CN C I
Sbjct: 1670 EWCNVCGI 1677
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 3 EACNACS 9
E C AC+
Sbjct: 1420 ETCTACA 1426
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 3 EACNACS 9
E C AC+
Sbjct: 1420 ETCTACA 1426
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 3 EACNACS 9
E C AC+
Sbjct: 1420 ETCTACA 1426
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 EACNACSI 10
E CN C I
Sbjct: 1670 EWCNVCGI 1677
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 ENEACNAC 8
EN+ NAC
Sbjct: 370 ENDGDNAC 377
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 ENEACNAC 8
EN+ NAC
Sbjct: 370 ENDGDNAC 377
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 ENEACNAC 8
EN+ NAC
Sbjct: 370 ENDGDNAC 377
>sp|UL32_HHV7J|PACKAGING protein UL32|Human herpesvirus 7 (strain JI)
Query: 5 CNACSI 10
CN CSI
Sbjct: 73 CNICSI 78
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 3 EACNACSI 10
+AC+ C +
Sbjct: 1176 QACHTCKV 1183
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 3 EACNACSI 10
+AC+ C +
Sbjct: 1176 QACHTCKV 1183
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 ENEACNACS 9
E E C +CS
Sbjct: 1524 EREHCKSCS 1532
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 5 CNACSI 10
CN CS+
Sbjct: 4563 CNDCSV 4568
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 2 NEACNAC 8
NEA AC
Sbjct: 396 NEALTAC 402
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 1 ENEACNAC 8
ENE +AC
Sbjct: 370 ENEGDHAC 377
>sp|NSP1_ROTHL|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 2 NEACN 6
NEACN
Sbjct: 257 NEACN 261
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 5 CNACS 9
CN CS
Sbjct: 6144 CNVCS 6148
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 5 CNACS 9
CN CS
Sbjct: 6194 CNVCS 6198
30|SequenceR|155|146|PTCGEENEAC
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 PTCGEENEA 9
PTC E+E+
Sbjct: 2360 PTCSAEDES 2368
>sp|PG003_VACCC|TRUNCATED Ankyrin repeat protein OPG003|Vaccinia virus (strain Copenhagen)
Query: 1 PTCGEENE 8
P C +E+E
Sbjct: 195 PNCADEDE 202
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 3 CGEENEA 9
CGEEN A
Sbjct: 209 CGEENLA 215
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 3 CGEENEA 9
CGEEN A
Sbjct: 203 CGEENLA 209
>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)
Query: 3 CGEENEA 9
CGEEN A
Sbjct: 197 CGEENLA 203
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 3 CGEENEA 9
CGEEN A
Sbjct: 197 CGEENLA 203
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 3 CGEENEA 9
CGEEN A
Sbjct: 197 CGEENLA 203
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 3 CGEENEA 9
CGEEN A
Sbjct: 197 CGEENLA 203
>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great
Query: 3 CGEENEA 9
CGEEN A
Sbjct: 197 CGEENLA 203
>sp|LAP_YMTV5|E3 ubiquitin-protein ligase LAP|Yaba monkey tumor virus (strain
Query: 2 TCGEENEAC 10
TC E N C
Sbjct: 11 TCDERNNFC 19
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 2 TCGEENEAC 10
TC EE+ C
Sbjct: 379 TCAEEDALC 387
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 2 TCGEENEAC 10
TC EE+ C
Sbjct: 379 TCAEEDALC 387
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 2 TCGEENEAC 10
TC EE+ C
Sbjct: 379 TCAEEDALC 387
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 2 TCGEENEAC 10
TC EE+ C
Sbjct: 379 TCAEEDALC 387
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 2 TCGEENEAC 10
TC EE+ C
Sbjct: 379 TCAEEDALC 387
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 2 TCGEENEAC 10
TC EE+ C
Sbjct: 379 TCAEEDALC 387
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 2 TCGEENEAC 10
TC EE+ C
Sbjct: 379 TCAEEDALC 387
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 2 TCGEENEAC 10
TC EE+ C
Sbjct: 379 TCAEEDALC 387
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 TCGEENEAC 10
TC EE+ C
Sbjct: 379 TCAEEDALC 387
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 1 PTCGEENEA 9
P C +EN A
Sbjct: 797 PKCKDENSA 805
>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 GEENEAC 10
GE NE C
Sbjct: 279 GESNEDC 285
>sp|E4RF4_ADE02|EARLY 4 ORF4 protein|Human adenovirus C serotype 2
Query: 1 PTCGEENE 8
P C +NE
Sbjct: 10 PVCDSQNE 17
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 2 TCGEEN 7
TC EEN
Sbjct: 754 TCVEEN 759
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 TCGEEN 7
TC EEN
Sbjct: 754 TCVEEN 759
31|SequenceR|160|151|CALHLPTCGE
>sp|PG195_VACCC|PROTEIN OPG195|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 CALHLPTCGE 10
C++HLPT E
Sbjct: 50 CSVHLPTASE 59
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 2 ALHLPTCG 9
+LH P+CG
Sbjct: 1084 SLHCPSCG 1091
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 2 ALHLPTCG 9
+LH P+CG
Sbjct: 1084 SLHCPSCG 1091
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 CALHLPTCG 9
C L LPT G
Sbjct: 1604 CGLLLPTQG 1612
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 CALHLPTCG 9
C L LPT G
Sbjct: 1604 CGLLLPTQG 1612
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 CALHLP 6
C LH P
Sbjct: 578 CTLHFP 583
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 LHLPTC 8
LHLP C
Sbjct: 221 LHLPGC 226
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 LHLPTC 8
LHLP C
Sbjct: 221 LHLPGC 226
>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5
Query: 1 CALHLPTCGE 10
CAL L C E
Sbjct: 268 CALWLHRCAE 277
>sp|SCAF_HHV7J|CAPSID scaffolding protein|Human herpesvirus 7 (strain JI)
Query: 1 CALHLP 6
CA+H P
Sbjct: 258 CAVHAP 263
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 CALHLPT 7
C+L LPT
Sbjct: 1177 CSLALPT 1183
>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2
Query: 1 CALHLPTCGE 10
CAL L C E
Sbjct: 268 CALWLHRCAE 277
>sp|UL79_HCMVM|PROTEIN UL79|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 ALHLPTCG 9
ALH+PT
Sbjct: 285 ALHMPTLA 292
>sp|UL79_HCMVA|PROTEIN UL79|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 ALHLPTCG 9
ALH+PT
Sbjct: 285 ALHMPTLA 292
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 3 LHLPTC 8
LH+P C
Sbjct: 615 LHVPDC 620
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 3 LHLPTC 8
LH+P C
Sbjct: 615 LHVPDC 620
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 CALHLPT 7
CA+H+P+
Sbjct: 1140 CAVHVPS 1146
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 CALHLPT 7
CA+H+P+
Sbjct: 1140 CAVHVPS 1146
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 3 LHLPTC 8
LH+P C
Sbjct: 615 LHVPDC 620
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 CALHLPT 7
CA+H+P+
Sbjct: 1140 CAVHVPS 1146
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 CALHLPT 7
CA+H+P+
Sbjct: 1141 CAVHVPS 1147
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 CALHLPT 7
CA+H+P+
Sbjct: 1140 CAVHVPS 1146
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 CALHLPT 7
CA+H+P+
Sbjct: 1141 CAVHVPS 1147
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 3 LHLPTC 8
LHLP C
Sbjct: 221 LHLPGC 226
>sp|PG195_MONPV|PROTEIN OPG195|Monkeypox virus (MPXV)
Query: 1 CALHLPT 7
C++H PT
Sbjct: 50 CSVHRPT 56
>sp|NCAP_MEASZ|NUCLEOPROTEIN virus (strain Edmonston-Zagreb vaccine)
Query: 2 ALHLPT 7
A HLPT
Sbjct: 464 AAHLPT 469
>sp|NCAP_MEASY|NUCLEOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 2 ALHLPT 7
A HLPT
Sbjct: 464 AAHLPT 469
>sp|NCAP_MEASW|NUCLEOPROTEIN virus (strain Edmonston-Schwarz vaccine)
Query: 2 ALHLPT 7
A HLPT
Sbjct: 464 AAHLPT 469
>sp|NCAP_MEASS|NUCLEOPROTEIN virus (strain Shanghai-191 vaccine)
Query: 2 ALHLPT 7
A HLPT
Sbjct: 464 AAHLPT 469
>sp|NCAP_MEASM|NUCLEOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 2 ALHLPT 7
A HLPT
Sbjct: 464 AAHLPT 469
>sp|NCAP_MEASI|NUCLEOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 2 ALHLPT 7
A HLPT
Sbjct: 464 AAHLPT 469
>sp|NCAP_MEASH|NUCLEOPROTEIN virus (strain Halle) (MeV)
Query: 2 ALHLPT 7
A HLPT
Sbjct: 464 AAHLPT 469
>sp|NCAP_MEASF|NUCLEOPROTEIN virus (strain Edmonston B)
Query: 2 ALHLPT 7
A HLPT
Sbjct: 464 AAHLPT 469
>sp|NCAP_MEASE|NUCLEOPROTEIN virus (strain Edmonston) (MeV)
Query: 2 ALHLPT 7
A HLPT
Sbjct: 464 AAHLPT 469
>sp|NCAP_MEASA|NUCLEOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 2 ALHLPT 7
A HLPT
Sbjct: 464 AAHLPT 469
>sp|DUT_HHV6Z|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6B (strain
Query: 3 LHLPTCGE 10
HL TC E
Sbjct: 256 FHLKTCRE 263
>sp|UL121_HCMVM|MEMBRANE protein UL121|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CALHLPT 7
C HLPT
Sbjct: 124 CIAHLPT 130
>sp|TRX2_HCMVM|TRIPLEX capsid protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 LHLPTCG 9
LH+PT G
Sbjct: 83 LHVPTHG 89
>sp|TRX2_HCMVA|TRIPLEX capsid protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 LHLPTCG 9
LH+PT G
Sbjct: 83 LHVPTHG 89
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 4 HLPTCGE 10
H P CGE
Sbjct: 342 HCPDCGE 348
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 4 HLPTCGE 10
H P CGE
Sbjct: 343 HCPDCGE 349
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 4 HLPTCGE 10
H P CGE
Sbjct: 342 HCPDCGE 348
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 4 HLPTCGE 10
H P CGE
Sbjct: 342 HCPDCGE 348
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 4 HLPTCGE 10
H P CGE
Sbjct: 343 HCPDCGE 349
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 4 HLPTCGE 10
H P CGE
Sbjct: 343 HCPDCGE 349
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 ALHLPT 7
++HLPT
Sbjct: 2304 SIHLPT 2309
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 4 HLPTCGE 10
H P CGE
Sbjct: 343 HCPDCGE 349
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 ALHLPT 7
++HLPT
Sbjct: 2290 SIHLPT 2295
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 ALHLPT 7
++HLPT
Sbjct: 2298 SIHLPT 2303
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 LHLPTC 8
LHLP C
Sbjct: 221 LHLPGC 226
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 LHLPTC 8
LHLP C
Sbjct: 221 LHLPGC 226
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 3 LHLPTC 8
LHLP C
Sbjct: 221 LHLPGC 226
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 LHLPTC 8
LHLP C
Sbjct: 221 LHLPGC 226
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 ALHLPT 7
++HLPT
Sbjct: 2298 SIHLPT 2303
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 LHLPTC 8
LHLP C
Sbjct: 221 LHLPGC 226
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 LHLPTC 8
LHLP C
Sbjct: 221 LHLPGC 226
32|SequenceR|165|156|GDGKRCALHL
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 GKRCALH 9
G+RC LH
Sbjct: 653 GERCELH 659
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 GKRCALH 9
G+RC LH
Sbjct: 654 GERCELH 660
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 DGKRC 6
DGKRC
Sbjct: 223 DGKRC 227
>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2
Query: 5 RCALHL 10
RC+LHL
Sbjct: 391 RCSLHL 396
>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5
Query: 5 RCALHL 10
RC+LHL
Sbjct: 392 RCSLHL 397
>sp|YVBF_VACCC|UNCHARACTERIZED 8.4 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 KRCALHL 10
+RC LH+
Sbjct: 17 RRCPLHI 23
>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989
Query: 2 DGKRCAL 8
DGK C L
Sbjct: 76 DGKNCTL 82
>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986
Query: 2 DGKRCAL 8
DGK C L
Sbjct: 60 DGKNCTL 66
>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 DGKRCAL 8
DGK C L
Sbjct: 76 DGKNCTL 82
>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980
Query: 2 DGKRCAL 8
DGK C L
Sbjct: 76 DGKNCTL 82
>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979
Query: 2 DGKRCAL 8
DGK C L
Sbjct: 60 DGKNCTL 66
>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978
Query: 2 DGKRCAL 8
DGK C L
Sbjct: 76 DGKNCTL 82
>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978
Query: 2 DGKRCAL 8
DGK C L
Sbjct: 76 DGKNCTL 82
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 2 DGKRCAL 8
DGK C L
Sbjct: 76 DGKNCTL 82
>sp|HEMA_I71A3|HEMAGGLUTININ A virus (strain A/Equine/Tokyo/1971
Query: 2 DGKRCAL 8
DGK C L
Sbjct: 75 DGKNCTL 81
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 3 GKRCALHL 10
GKR A+H+
Sbjct: 156 GKRVAVHV 163
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 3 GKRCALHL 10
GKR A+H+
Sbjct: 156 GKRVAVHV 163
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 GDGKRCAL 8
G+G RC L
Sbjct: 233 GNGSRCWL 240
>sp|VP35_EBOZM|POLYMERASE cofactor VP35|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 GDGKRCAL 8
GD +CAL
Sbjct: 270 GDSPQCAL 277
>sp|VP35_EBOZ5|POLYMERASE cofactor VP35|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 GDGKRCAL 8
GD +CAL
Sbjct: 270 GDSPQCAL 277
>sp|VP35_EBOSU|POLYMERASE cofactor VP35|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 GDGKRCAL 8
GD +CAL
Sbjct: 259 GDSPQCAL 266
>sp|VP35_EBORR|POLYMERASE cofactor VP35|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 GDGKRCAL 8
GD +CAL
Sbjct: 259 GDSPQCAL 266
>sp|VP35_EBORE|POLYMERASE cofactor VP35|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 GDGKRCAL 8
GD +CAL
Sbjct: 259 GDSPQCAL 266
>sp|TAT_HV1OY|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 4 KRCALH 9
KRC LH
Sbjct: 28 KRCCLH 33
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 1 GDGKRCA 7
G+G RC+
Sbjct: 68 GNGTRCS 74
>sp|E1B55_ADE41|E1B 55 kDa protein|Human adenovirus F serotype 41
Query: 5 RCALHL 10
RC +HL
Sbjct: 370 RCTMHL 375
>sp|US22_HCMVA|EARLY nuclear protein HWLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 DGKRC 6
DG+RC
Sbjct: 444 DGQRC 448
>sp|US22_HCMVM|TEGUMENT protein US22|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 DGKRC 6
DG+RC
Sbjct: 444 DGQRC 448
>sp|NRAM_I68A5|NEURAMINIDASE A virus (strain A/Korea/426/1968
Query: 2 DGKRC 6
+GKRC
Sbjct: 413 EGKRC 417
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 2 DGKRCALHL 10
DG++ LHL
Sbjct: 1504 DGRQVDLHL 1512
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 2 DGKRCALHL 10
DG++ LHL
Sbjct: 1504 DGRQVDLHL 1512
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 2 DGKRCALHL 10
DG++ LHL
Sbjct: 1504 DGRQVDLHL 1512
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 2 DGKRCALHL 10
DG++ LHL
Sbjct: 1504 DGRQVDLHL 1512
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 DGKRCALHL 10
DG++ LHL
Sbjct: 1504 DGRQVDLHL 1512
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 2 DGKRCALHL 10
DG++ LHL
Sbjct: 1504 DGRQVDLHL 1512
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 2 DGKRCALHL 10
DG++ LHL
Sbjct: 1504 DGRQVDLHL 1512
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 2 DGKRCALHL 10
DG++ LHL
Sbjct: 1504 DGRQVDLHL 1512
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 2 DGKRCALHL 10
DG++ LHL
Sbjct: 1504 DGRQVDLHL 1512
>sp|PAP1_MCV1|POLY(A) polymerase catalytic subunit|Molluscum contagiosum virus subtype 1
Query: 1 GDGKRCALHL 10
G G R LH+
Sbjct: 315 GGGARLRLHM 324
>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13
Query: 1 GDGKRC 6
G GK+C
Sbjct: 167 GQGKQC 172
33|SequenceR|170|161|EVLIEGDGKR
>sp|DNB2_ADE07|DNA-BINDING protein|Human adenovirus B serotype 7
Query: 3 LIEGDGKR 10
+IE DGKR
Sbjct: 127 IIEKDGKR 134
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 1 EVLIEGDG 8
++LI+GDG
Sbjct: 1735 QILIDGDG 1742
>sp|RP22_VAR67|DNA-DIRECTED RNA polymerase 22 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 VLIEGDGKR 10
VL GDGK+
Sbjct: 127 VLQTGDGKK 135
>sp|RP22_VACCC|DNA-DIRECTED RNA polymerase 22 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 VLIEGDGKR 10
VL GDGK+
Sbjct: 127 VLQTGDGKK 135
>sp|RP22_MONPV|DNA-DIRECTED RNA polymerase 22 kDa|Monkeypox virus (MPXV)
Query: 2 VLIEGDGKR 10
VL GDGK+
Sbjct: 127 VLQTGDGKK 135
>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23
Query: 4 IEGDGK 9
IEGDG+
Sbjct: 391 IEGDGQ 396
>sp|PG056_VAR67|PROTEIN OPG056|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 VLIEGDGKR 10
+LI DG R
Sbjct: 309 ILISSDGAR 317
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 5 EGDGKR 10
+GDG+R
Sbjct: 2799 DGDGRR 2804
>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17
Query: 2 VLIEGDG 8
+++EGDG
Sbjct: 391 LVVEGDG 397
>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22
Query: 4 IEGDG 8
IEGDG
Sbjct: 392 IEGDG 396
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 VLIEGDG 8
VL+E DG
Sbjct: 1784 VLLESDG 1790
>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1
Query: 2 VLIEGDG 8
+L+EG+G
Sbjct: 449 LLVEGEG 455
34|SequenceR|175|166|CYQVLEVLIE
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank
Query: 1 CYQVLEVLIE 10
C VLE L+E
Sbjct: 236 CQPVLENLVE 245
>sp|TEG4_VZVO|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 CYQVLEVL 8
CY V+E L
Sbjct: 359 CYAVIEDL 366
>sp|TEG4_VZVD|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 CYQVLEVL 8
CY V+E L
Sbjct: 359 CYAVIEDL 366
35|SequenceR|180|171|DMQTHCYQVL
>sp|PKG1_ADE07|PACKAGING protein 1|Human adenovirus B serotype 7
Query: 1 DMQTHCYQVL 10
++Q+H Y+VL
Sbjct: 416 NIQSHLYRVL 425
>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2
Query: 4 THCYQ 8
THCYQ
Sbjct: 270 THCYQ 274
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 2 MQTHCYQ 8
+ THCY+
Sbjct: 1939 VSTHCYE 1945
>sp|PKG1_ADE05|PACKAGING protein 1|Human adenovirus C serotype 5
Query: 1 DMQTHCYQVL 10
++Q+H Y VL
Sbjct: 416 NIQSHLYHVL 425
>sp|PKG1_ADE02|PACKAGING protein 1|Human adenovirus C serotype 2
Query: 1 DMQTHCYQVL 10
++Q+H Y VL
Sbjct: 416 NIQSHLYHVL 425
>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 4 THCYQVL 10
THCY+ L
Sbjct: 274 THCYRPL 280
>sp|PKG1_ADE40|PACKAGING protein 1|Human adenovirus F serotype 40
Query: 1 DMQTHCYQVL 10
++Q H Y+VL
Sbjct: 415 NIQAHLYRVL 424
>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 4 THCYQ 8
THCY+
Sbjct: 276 THCYR 280
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 3 QTHCYQ 8
QT CYQ
Sbjct: 21 QTTCYQ 26
>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human
Query: 2 MQTHC 6
+QTHC
Sbjct: 217 LQTHC 221
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 2 MQTHC 6
M+THC
Sbjct: 246 MKTHC 250
>sp|PKG1_ADE12|PACKAGING protein 1|Human adenovirus A serotype 12
Query: 1 DMQTHCYQVL 10
++Q H Y++L
Sbjct: 418 NIQAHLYKIL 427
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 5 HCYQV 9
HCY+V
Sbjct: 639 HCYKV 643
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 2 MQTHC 6
M+THC
Sbjct: 246 MKTHC 250
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 MQTHCYQVL 10
+ TH +Q+L
Sbjct: 2849 LMTHFFQIL 2857
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 MQTHCYQVL 10
+ TH +Q+L
Sbjct: 2850 LMTHFFQIL 2858
>sp|UL92_HHV6U|PROTEIN U63|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 DMQTHC 6
DMQT C
Sbjct: 59 DMQTDC 64
>sp|UL92_HHV6Z|PROTEIN U63|Human herpesvirus 6B (strain Z29)
Query: 1 DMQTHC 6
DMQT C
Sbjct: 61 DMQTDC 66
>sp|CVC1_HCMVM|CAPSID vertex component 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 MQTHCYQVL 10
M+TH Y L
Sbjct: 1 METHLYSDL 9
>sp|CVC1_HCMVA|CAPSID vertex component 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 MQTHCYQVL 10
M+TH Y L
Sbjct: 1 METHLYSDL 9
>sp|PG181_VARV|PROTEIN OPG181|Variola virus
Query: 1 DMQTHC 6
DM HC
Sbjct: 272 DMNRHC 277
>sp|PG181_VAR67|PROTEIN OPG181|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 DMQTHC 6
DM HC
Sbjct: 272 DMNRHC 277
>sp|VL2_HPV5B|MINOR capsid protein L2|Human papillomavirus type 5b
Query: 1 DMQTHCYQ 8
D TH YQ
Sbjct: 10 DSVTHIYQ 17
>sp|VL2_HPV47|MINOR capsid protein L2|Human papillomavirus 47
Query: 1 DMQTHCYQ 8
D TH YQ
Sbjct: 10 DSVTHIYQ 17
>sp|VL2_HPV36|MINOR capsid protein L2|Human papillomavirus 36
Query: 1 DMQTHCYQ 8
D TH YQ
Sbjct: 10 DSVTHIYQ 17
>sp|VL2_HPV12|MINOR capsid protein L2|Human papillomavirus 12
Query: 1 DMQTHCYQ 8
D TH YQ
Sbjct: 10 DSVTHIYQ 17
>sp|VL2_HPV08|MINOR capsid protein L2|Human papillomavirus type 8
Query: 1 DMQTHCYQ 8
D TH YQ
Sbjct: 10 DSVTHIYQ 17
>sp|VL2_HPV05|MINOR capsid protein L2|Human papillomavirus 5
Query: 1 DMQTHCYQ 8
D TH YQ
Sbjct: 10 DSVTHIYQ 17
>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38
Query: 2 MQTHCYQV 9
+Q HC+ +
Sbjct: 213 LQQHCFYI 220
>sp|PG181_VACCA|PROTEIN OPG181|Vaccinia virus (strain Ankara) (VACV)
Query: 1 DMQTHC 6
DM HC
Sbjct: 268 DMNRHC 273
36|SequenceR|185|176|KYDTVDMQTH
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 DTVDMQ 8
DTVDM+
Sbjct: 898 DTVDME 903
>sp|UL136_HCMVT|PROTEIN UL136|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 KYDTVDM 7
++DTV+M
Sbjct: 154 RFDTVEM 160
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 DTVDMQ 8
DTVDM+
Sbjct: 898 DTVDME 903
37|SequenceR|190|181|FVTEGKYDTV
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 1 FVTEGKYD 8
F+ GKYD
Sbjct: 698 FLVSGKYD 705
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 1 FVTEGKYD 8
F+ GKYD
Sbjct: 698 FLVSGKYD 705
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 1 FVTEGKYD 8
F+ GKYD
Sbjct: 698 FLVSGKYD 705
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 1 FVTEGKYD 8
F+ GKYD
Sbjct: 698 FLVSGKYD 705
>sp|GLYCP_HENDH|GLYCOPROTEIN G|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 VTEGKYDTV 10
V GKYD V
Sbjct: 340 VERGKYDKV 348
>sp|NSP2_ROTGA|NON-STRUCTURAL protein 2|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)
Query: 1 FVTEGKYDTV 10
F TEGK + V
Sbjct: 163 FATEGKCNVV 172
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 FVTEGKYDTV 10
++ EG+Y T+
Sbjct: 164 YLFEGQYSTI 173
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FVTEGKYDTV 10
++ EG+Y T+
Sbjct: 164 YLFEGQYSTI 173
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FVTEGKYDTV 10
++ EG+Y T+
Sbjct: 164 YLFEGQYSTI 173
>sp|PP85_HCMVM|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 VTEGKYDT 9
VT+G+Y T
Sbjct: 324 VTDGQYAT 331
>sp|PP85_HCMVA|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 VTEGKYDT 9
VT+G+Y T
Sbjct: 324 VTDGQYAT 331
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 FVTEGKYDTV 10
+V EG DT+
Sbjct: 507 YVAEGTEDTL 516
>sp|V_PI2HT|NON-STRUCTURAL protein V|Human parainfluenza 2 virus (strain
Query: 2 VTEGKYDTV 10
+TEG Y V
Sbjct: 121 ITEGSYKGV 129
>sp|V_PI2H|NON-STRUCTURAL protein V|Human parainfluenza 2 virus (HPIV-2)
Query: 2 VTEGKYDTV 10
+TEG Y V
Sbjct: 121 ITEGSYKGV 129
>sp|PHOSP_PI2HT|PHOSPHOPROTEIN parainfluenza 2 virus (strain
Query: 2 VTEGKYDTV 10
+TEG Y V
Sbjct: 121 ITEGSYKGV 129
>sp|PHOSP_PI2H|PHOSPHOPROTEIN parainfluenza 2 virus (HPIV-2)
Query: 2 VTEGKYDTV 10
+TEG Y V
Sbjct: 121 ITEGSYKGV 129
>sp|M1_DHVI1|MATRIX protein 1|Dhori virus (strain Indian/1313/61) (Dho)
Query: 2 VTEGKYDT 9
V +GKY+T
Sbjct: 184 VLKGKYET 191
>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)
Query: 5 GKYDT 9
GKYDT
Sbjct: 9 GKYDT 13
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 FVTEGKY 7
F T+G+Y
Sbjct: 2014 FTTDGEY 2020
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 FVTEGKY 7
F T+G+Y
Sbjct: 2015 FATDGEY 2021
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 FVTEGK 6
F+T+GK
Sbjct: 885 FITDGK 890
38|SequenceR|195|186|QVAYHFVTEG
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 3 AYHFVTEG 10
A+H++TEG
Sbjct: 139 AWHYLTEG 146
>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)
Query: 2 VAYHFVTE 9
V YH VTE
Sbjct: 107 VLYHLVTE 114
>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)
Query: 2 VAYHFVTE 9
V YH VTE
Sbjct: 107 VLYHLVTE 114
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 VAYHFVTE 9
VAYH VT+
Sbjct: 2474 VAYHTVTD 2481
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 VAYHFVTE 9
VAYH VT+
Sbjct: 2474 VAYHTVTD 2481
>sp|MATRX_CHAV|MATRIX protein|Chandipura virus (strain I653514) (CHPV)
Query: 2 VAYHFVTEG 10
V YH T+G
Sbjct: 132 VEYHATTQG 140
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 QVAYHFVTEG 10
Q+A HF + G
Sbjct: 1228 QIACHFHSNG 1237
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 QVAYHFVTEG 10
Q+A HF + G
Sbjct: 1228 QIACHFHSNG 1237
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 QVAYHFVTEG 10
Q+A HF + G
Sbjct: 1228 QIACHFHSNG 1237
>sp|VL2_HPV24|MINOR capsid protein L2|Human papillomavirus 24
Query: 3 AYHFVTE 9
A+H +TE
Sbjct: 186 AFHIITE 192
>sp|VE7_HPV10|PROTEIN E7|Human papillomavirus type 10
Query: 1 QVAYHFVTE 9
Q AY VTE
Sbjct: 40 QQAYRVVTE 48
>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7
Query: 2 VAYHFVTE 9
+ Y FVTE
Sbjct: 446 IMYFFVTE 453
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 VAYHFVTEG 10
+A+H T G
Sbjct: 113 LAFHLTTRG 121
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 VAYHFVTEG 10
+A+H T G
Sbjct: 113 LAFHLTTRG 121
>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 VAYHFVTEG 10
+A+H T G
Sbjct: 113 LAFHLTTRG 121
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 VAYHFVTEG 10
+A+H T G
Sbjct: 113 LAFHLTTRG 121
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 VAYHFVTEG 10
+A+H T G
Sbjct: 113 LAFHLTTRG 121
>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17
Query: 1 QVAYHF 6
++AYH+
Sbjct: 334 EIAYHY 339
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 AYHFVT 8
+YH++T
Sbjct: 2102 SYHYIT 2107
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 4 YHFVTEG 10
YH +T+G
Sbjct: 227 YHGITDG 233
>sp|GM_HHV2H|ENVELOPE glycoprotein M|Human herpesvirus 2 (strain HG52)
Query: 2 VAYHFVTEG 10
+A HF T G
Sbjct: 179 LAAHFCTRG 187
39|SequenceR|200|191|QSNDGQVAYH
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 QSNDGQVAYH 10
Q+NDG + YH
Sbjct: 1484 QANDGFIDYH 1493
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 QSNDGQVAYH 10
Q+ DG + YH
Sbjct: 1454 QAGDGFIDYH 1463
>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)
Query: 2 SNDGQVAYH 10
SN+ AYH
Sbjct: 147 SNNNHFAYH 155
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 QSNDGQVAYH 10
Q DG YH
Sbjct: 34 QPGDGNCFYH 43
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 QSNDGQVAYH 10
Q DG YH
Sbjct: 34 QPGDGNCFYH 43
>sp|TEG7_HHV8P|TEGUMENT protein ORF55|Human herpesvirus 8 type P
Query: 1 QSNDGQVAYH 10
QSN G A H
Sbjct: 56 QSNLGTTALH 65
>sp|US07_HCMVM|MEMBRANE glycoprotein US7|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 NDGQV 7
NDGQV
Sbjct: 105 NDGQV 109
>sp|US07_HCMVA|UNIQUE short US7 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 NDGQV 7
NDGQV
Sbjct: 105 NDGQV 109
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 1 QSNDGQVAY 9
+SND +AY
Sbjct: 665 KSNDDLIAY 673
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 1 QSNDGQVAY 9
+SND +AY
Sbjct: 665 KSNDDLIAY 673
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 1 QSNDGQVAY 9
+SND +AY
Sbjct: 665 KSNDDLIAY 673
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 SNDGQVAYH 10
S+DG V Y+
Sbjct: 4797 SDDGVVCYN 4805
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 QSNDGQVAY 9
+ N G VAY
Sbjct: 1181 RENGGDVAY 1189
40|SequenceR|205|196|LLQLVQSNDG
>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 LLQLVQSND 9
L+ LVQ+ND
Sbjct: 469 LISLVQTND 477
41|SequenceR|210|201|VANRGLLQLV
>sp|RDRP_ROTHC|RNA-DIRECTED RNA polymerase|Rotavirus C (isolate RVC/Human/United
Query: 1 VANRGLLQLV 10
+AN+ L+Q V
Sbjct: 603 IANKALIQTV 612
>sp|UL49_HHV8P|PROTEIN ORF66|Human herpesvirus 8 type P
Query: 4 RGLLQLV 10
RGLLQL
Sbjct: 410 RGLLQLT 416
42|SequenceR|215|206|QNLGAVANRG
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 NLGAVANR 9
N+G V NR
Sbjct: 570 NIGGVGNR 577
>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)
Query: 1 QNLGAVANR 9
QNL V NR
Sbjct: 120 QNLSVVLNR 128
>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 QNLGAVANR 9
QNL V NR
Sbjct: 120 QNLSVVLNR 128
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 2 NLGAVAN 8
NLG VAN
Sbjct: 430 NLGDVAN 436
>sp|EAD_EBVG|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 3 LGAVANRG 10
L AVAN G
Sbjct: 47 LAAVANAG 54
>sp|EAD_EBVB9|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 3 LGAVANRG 10
L AVAN G
Sbjct: 47 LAAVANAG 54
>sp|EAD_EBVA8|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 3 LGAVANRG 10
L AVAN G
Sbjct: 47 LAAVANAG 54
43|SequenceR|220|211|GQNNVQNLGA
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 2 QNNVQNLGA 10
+NN++ LGA
Sbjct: 1532 RNNIRKLGA 1540
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 1 GQNNVQNL 8
G+NN +NL
Sbjct: 1701 GKNNSENL 1708
Query: 1 GQNNVQNL 8
G+N VQN+
Sbjct: 2088 GRNLVQNI 2095
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 2 QNNVQN 7
QN+VQN
Sbjct: 568 QNDVQN 573
>sp|POXIN_VACCC|POXIN virus (strain Copenhagen) (VACV)
Query: 1 GQNNVQNLGA 10
G+N+ +NL +
Sbjct: 202 GENDTENLSS 211
>sp|POXIN_VACCA|POXIN virus (strain Ankara) (VACV)
Query: 1 GQNNVQNLGA 10
G+N+ +NL +
Sbjct: 202 GENDTENLSS 211
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 GQNNVQNLG 9
G N + NLG
Sbjct: 777 GYNTLNNLG 785
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 2 QNNVQNL 8
+NN++NL
Sbjct: 74 RNNIKNL 80
>sp|U10_HHV6Z|PROTEIN U10|Human herpesvirus 6B (strain Z29)
Query: 4 NVQNLG 9
N++NLG
Sbjct: 271 NIENLG 276
>sp|U10_HHV6U|U10 protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 NVQNLG 9
N++NLG
Sbjct: 271 NIENLG 276
>sp|U10_HHV6H|PROTEIN U10|Human herpesvirus 6B (HHV-6 variant
Query: 4 NVQNLG 9
N++NLG
Sbjct: 271 NIENLG 276
44|SequenceR|225|216|HLPTLGQNNV
>sp|PG160_VACCC|DNA packaging protein OPG160|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 HLPTLGQNNV 10
H+P LG+ N+
Sbjct: 145 HVPILGRANI 154
>sp|PG160_MONPV|DNA packaging protein OPG160|Monkeypox virus (MPXV)
Query: 1 HLPTLGQNNV 10
H+P LG+ N+
Sbjct: 175 HVPILGRANI 184
>sp|PG160_VARV|DNA packaging protein OPG160|Variola virus
Query: 1 HLPTLGQNNV 10
H+P LG+ N+
Sbjct: 145 HVPILGRANI 154
>sp|PG160_VAR67|DNA packaging protein OPG160|Variola virus (isolate
Query: 1 HLPTLGQNNV 10
H+P LG+ N+
Sbjct: 145 HVPILGRANI 154
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 3 PTLGQN 8
PTLGQ+
Sbjct: 742 PTLGQD 747
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PTLGQN 8
PTLGQ+
Sbjct: 742 PTLGQD 747
45|SequenceR|230|221|LQCALHLPTL
>sp|PG195_VACCC|PROTEIN OPG195|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 CALHLPT 9
C++HLPT
Sbjct: 50 CSVHLPT 56
>sp|UL121_HCMVM|MEMBRANE protein UL121|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 CALHLPTL 10
C HLPTL
Sbjct: 124 CIAHLPTL 131
>sp|SCAF_HHV7J|CAPSID scaffolding protein|Human herpesvirus 7 (strain JI)
Query: 3 CALHLPTL 10
CA+H P L
Sbjct: 258 CAVHAPDL 265
>sp|UL79_HCMVM|PROTEIN UL79|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 ALHLPTL 10
ALH+PTL
Sbjct: 285 ALHMPTL 291
>sp|UL79_HCMVA|PROTEIN UL79|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 ALHLPTL 10
ALH+PTL
Sbjct: 285 ALHMPTL 291
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 QCALHLPT 9
+CA+H+P+
Sbjct: 1139 KCAVHVPS 1146
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 QCALHLPT 9
+CA+H+P+
Sbjct: 1139 KCAVHVPS 1146
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 QCALHLPT 9
+CA+H+P+
Sbjct: 1139 KCAVHVPS 1146
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 QCALHLPT 9
+CA+H+P+
Sbjct: 1140 KCAVHVPS 1147
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 QCALHLPT 9
+CA+H+P+
Sbjct: 1139 KCAVHVPS 1146
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 QCALHLPT 9
+CA+H+P+
Sbjct: 1140 KCAVHVPS 1147
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 QCALHLPTL 10
+CA H+P L
Sbjct: 1710 ECAAHIPYL 1718
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 QCALHLPTL 10
+CA H+P L
Sbjct: 1710 ECAAHVPYL 1718
>sp|UL121_HCMVA|MEMBRANE protein UL121|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 CALHLPTL 10
C HLPTL
Sbjct: 124 CIAHLPTL 131
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 QCALHLPTL 10
+CA HLP +
Sbjct: 1710 ECASHLPYI 1718
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 QCALHLPTL 10
+CA HLP +
Sbjct: 1710 ECASHLPYI 1718
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 QCALHLPTL 10
+CA HLP +
Sbjct: 1710 ECASHLPYI 1718
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 QCALHLPTL 10
+CA HLP +
Sbjct: 1710 ECASHLPYI 1718
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 QCALHLPTL 10
+CA HLP +
Sbjct: 1710 ECASHLPYI 1718
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 QCALHLPTL 10
+CA HLP +
Sbjct: 1710 ECASHLPYI 1718
>sp|NEC2_EBVB9|NUCLEAR egress protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LQCALHLPT 9
L+C LH P+
Sbjct: 91 LRCFLHEPS 99
>sp|PG195_MONPV|PROTEIN OPG195|Monkeypox virus (MPXV)
Query: 3 CALHLPT 9
C++H PT
Sbjct: 50 CSVHRPT 56
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 CALHLP 8
C LH P
Sbjct: 578 CTLHFP 583
>sp|VE6_HPV40|PROTEIN E6|Human papillomavirus 40
Query: 2 QCALHLPTL 10
QC + LPTL
Sbjct: 18 QCNITLPTL 26
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 QCALHLPTL 10
+C+ HLP L
Sbjct: 1714 ECSRHLPYL 1722
>sp|VE6_HPV07|PROTEIN E6|Human papillomavirus 7
Query: 2 QCALHLPTL 10
QC + LPTL
Sbjct: 18 QCNITLPTL 26
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 3 CALHLPT 9
C+L LPT
Sbjct: 1177 CSLALPT 1183
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 LQCALHLPTL 10
L LH PTL
Sbjct: 483 LAMGLHQPTL 492
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 LQCALHLPT 9
+ C L LPT
Sbjct: 1602 VNCGLLLPT 1610
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 LQCALHLPT 9
+ C L LPT
Sbjct: 1602 VNCGLLLPT 1610
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 QCALHLPTL 10
+C+ H+P L
Sbjct: 1711 ECSRHIPYL 1719
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 QCALHLPTL 10
+C+ H+P L
Sbjct: 1708 ECSRHIPYL 1716
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 QCALHLPTL 10
+C+ H+P L
Sbjct: 1712 ECSRHIPYL 1720
>sp|VE2_HPV34|REGULATORY protein E2|Human papillomavirus type 34
Query: 1 LQCALHLPTL 10
LQCA PT+
Sbjct: 327 LQCAKIPPTI 336
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 QCALHLP 8
+C+ HLP
Sbjct: 1710 ECSKHLP 1716
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 QCALHLPTL 10
+C+ H+P L
Sbjct: 1714 ECSRHIPYL 1722
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 QCALHLPTL 10
+C+ H+P L
Sbjct: 1715 ECSRHIPYL 1723
>sp|NCAP_MEASZ|NUCLEOPROTEIN virus (strain Edmonston-Zagreb vaccine)
Query: 4 ALHLPT 9
A HLPT
Sbjct: 464 AAHLPT 469
>sp|NCAP_MEASY|NUCLEOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 4 ALHLPT 9
A HLPT
Sbjct: 464 AAHLPT 469
>sp|NCAP_MEASW|NUCLEOPROTEIN virus (strain Edmonston-Schwarz vaccine)
Query: 4 ALHLPT 9
A HLPT
Sbjct: 464 AAHLPT 469
>sp|NCAP_MEASS|NUCLEOPROTEIN virus (strain Shanghai-191 vaccine)
Query: 4 ALHLPT 9
A HLPT
Sbjct: 464 AAHLPT 469
>sp|NCAP_MEASM|NUCLEOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 4 ALHLPT 9
A HLPT
Sbjct: 464 AAHLPT 469
>sp|NCAP_MEASI|NUCLEOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 4 ALHLPT 9
A HLPT
Sbjct: 464 AAHLPT 469
>sp|NCAP_MEASH|NUCLEOPROTEIN virus (strain Halle) (MeV)
Query: 4 ALHLPT 9
A HLPT
Sbjct: 464 AAHLPT 469
>sp|NCAP_MEASF|NUCLEOPROTEIN virus (strain Edmonston B)
Query: 4 ALHLPT 9
A HLPT
Sbjct: 464 AAHLPT 469
>sp|NCAP_MEASE|NUCLEOPROTEIN virus (strain Edmonston) (MeV)
Query: 4 ALHLPT 9
A HLPT
Sbjct: 464 AAHLPT 469
>sp|NCAP_MEASA|NUCLEOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 4 ALHLPT 9
A HLPT
Sbjct: 464 AAHLPT 469
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 5 LHLPTL 10
LHLPTL
Sbjct: 1006 LHLPTL 1011
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 ALHLPT 9
++HLPT
Sbjct: 2304 SIHLPT 2309
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 QCALHLPTL 10
+C+ H+P L
Sbjct: 1715 ECSKHIPYL 1723
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 ALHLPT 9
++HLPT
Sbjct: 2298 SIHLPT 2303
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 ALHLPT 9
++HLPT
Sbjct: 2290 SIHLPT 2295
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 ALHLPT 9
++HLPT
Sbjct: 2298 SIHLPT 2303
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 QCALHLPTL 10
+C+ HLP +
Sbjct: 1710 ECSQHLPYI 1718
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 QCALHLPTL 10
+C+ HLP +
Sbjct: 1710 ECSQHLPYI 1718
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 QCALHLPTL 10
+C+ HLP +
Sbjct: 1710 ECSQHLPYI 1718
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 QCALHLPT 9
+ LH+PT
Sbjct: 835 RAVLHIPT 842
>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2
Query: 2 QCALHL 7
+C+LHL
Sbjct: 391 RCSLHL 396
>sp|US23_HCMVM|PROTEIN US23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LQCALHLPTL 10
L CA HL L
Sbjct: 137 LLCARHLDEL 146
>sp|US23_HCMVA|TEGUMENT protein US23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LQCALHLPTL 10
L CA HL L
Sbjct: 137 LLCARHLDEL 146
>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5
Query: 2 QCALHL 7
+C+LHL
Sbjct: 392 RCSLHL 397
46|SequenceR|235|226|MEQKGLQCAL
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 4 KGLQCA 9
KGLQC
Sbjct: 2702 KGLQCG 2707
>sp|NEC1_HHV8P|NUCLEAR egress protein 1|Human herpesvirus 8 type P
Query: 5 GLQCAL 10
G QCAL
Sbjct: 115 GFQCAL 120
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 KGLQCAL 10
KG++CA+
Sbjct: 5927 KGIRCAV 5933
>sp|MATRX_PIV5|MATRIX protein|Parainfluenza virus 5 (strain W3)
Query: 3 QKGLQC 8
QKGL C
Sbjct: 142 QKGLVC 147
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 5 GLQCAL 10
GL+CA+
Sbjct: 1474 GLECAI 1479
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 5 GLQCAL 10
GL+CA+
Sbjct: 1474 GLECAI 1479
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 5 GLQCAL 10
GL+CA+
Sbjct: 1472 GLECAI 1477
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 5 GLQCAL 10
GL+CA+
Sbjct: 1474 GLECAI 1479
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 5 GLQCAL 10
GL+CA+
Sbjct: 1474 GLECAI 1479
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 5 GLQCAL 10
GL+CA+
Sbjct: 1474 GLECAI 1479
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 KGLQCAL 10
KG++CA+
Sbjct: 5902 KGVRCAV 5908
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 QKGLQCAL 10
QKG+ C +
Sbjct: 5879 QKGILCVM 5886
47|SequenceR|240|231|LLVRVMEQKG
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 LVRVMEQKG 10
LVR+ME +G
Sbjct: 3149 LVRLMEAEG 3157
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 LVRVMEQKG 10
LVR+ME +G
Sbjct: 3149 LVRLMEAEG 3157
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 LVRVMEQKG 10
LVR+ME +G
Sbjct: 3149 LVRLMEAEG 3157
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 LVRVMEQKG 10
LVR+ME +G
Sbjct: 3149 LVRLMEAEG 3157
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 LVRVMEQKG 10
L+R+ME +G
Sbjct: 3151 LIRLMEAEG 3159
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 LVRVMEQKG 10
LVR+ME +G
Sbjct: 3147 LVRMMEGEG 3155
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 LVRVMEQKG 10
LVR+ME +G
Sbjct: 3150 LVRMMEGEG 3158
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 LVRVMEQKG 10
LVR+ME +G
Sbjct: 3150 LVRMMEGEG 3158
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 LVRVMEQKG 10
L+R+ME +G
Sbjct: 3134 LIRMMEGEG 3142
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 LVRVMEQKG 10
L+R+ME +G
Sbjct: 3134 LIRMMEGEG 3142
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 LVRVMEQKG 10
LVR+ME +G
Sbjct: 3132 LVRMMEGEG 3140
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 LVRVMEQKG 10
L+R+ME +G
Sbjct: 3132 LIRMMEGEG 3140
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 LVRVMEQKG 10
L+R+ME +G
Sbjct: 3130 LIRMMEGEG 3138
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 LVRVMEQKG 10
L+R+ME +G
Sbjct: 3132 LIRMMEGEG 3140
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 LVRVMEQKG 10
L+R+ME +G
Sbjct: 3133 LIRMMEGEG 3141
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 LVRVMEQKG 10
L+R+ME +G
Sbjct: 3132 LIRMMEGEG 3140
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 2 LVRVMEQKG 10
L+R+ME +G
Sbjct: 3132 LIRMMEGEG 3140
48|SequenceR|245|236|RANCLLLVRV
>sp|TEG1_HHV1F|TEGUMENT protein UL46|Human herpesvirus 1 (strain F)
Query: 2 ANCLLLVR 9
A C LLVR
Sbjct: 543 ATCPLLVR 550
>sp|TEG1_HHV11|TEGUMENT protein UL46|Human herpesvirus 1 (strain 17)
Query: 2 ANCLLLVR 9
A C LLVR
Sbjct: 544 ATCPLLVR 551
49|SequenceR|250|241|GMINCRANCL
>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain Merlin)
Query: 3 INCRANC 9
+NCR NC
Sbjct: 214 MNCRLNC 220
>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)
Query: 2 MINCRANCL 10
M+N A CL
Sbjct: 121 MVNTEARCL 129
>sp|K81_HHV8P|PROTEIN K8.1|Human herpesvirus 8 type P
Query: 2 MINCRANC 9
++ C ANC
Sbjct: 21 LVACHANC 28
>sp|UL95_HHV8P|PROTEIN UL95 homolog|Human herpesvirus 8 type P
Query: 5 CRANC 9
CRA+C
Sbjct: 170 CRADC 174
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GMINCRAN 8
G++ CR+N
Sbjct: 434 GILTCRSN 441
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 2 MINCRAN 8
++NC AN
Sbjct: 456 LVNCSAN 462
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 MINCRAN 8
++NC AN
Sbjct: 456 LVNCSAN 462
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GMINCRAN 8
G+I CR+N
Sbjct: 429 GIIMCRSN 436
>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)
Query: 2 MINCRANC 9
++N RA C
Sbjct: 124 LVNSRAQC 131
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GMINCRAN 8
G+INC +N
Sbjct: 441 GVINCLSN 448
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 CRANCL 10
CR +CL
Sbjct: 1306 CRTSCL 1311
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 CRANCL 10
CR +CL
Sbjct: 1306 CRTSCL 1311
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 CRANCL 10
CR +CL
Sbjct: 1306 CRTSCL 1311
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 CRANCL 10
CR +CL
Sbjct: 1306 CRTSCL 1311
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 CRANCL 10
CR +CL
Sbjct: 1306 CRTSCL 1311
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 4 NCRANCL 10
NC A C+
Sbjct: 1821 NCTAECI 1827
>sp|BET_FOAMV|PROTEIN Bet|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 5 CRANCL 10
C+A CL
Sbjct: 309 CKAGCL 314
>sp|US16_HCMVM|PROTEIN US16|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 CRANC 9
CR NC
Sbjct: 175 CRDNC 179
>sp|US16_HCMVA|UNCHARACTERIZED protein HVLF2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 CRANC 9
CR NC
Sbjct: 175 CRDNC 179
>sp|VGLI_HCMVA|UL37 immediate early glycoprotein|Human cytomegalovirus (strain AD169)
Query: 3 INCRANC 9
+NC NC
Sbjct: 214 MNCHLNC 220
>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17
Query: 4 NCRAN 8
NCR+N
Sbjct: 463 NCRSN 467
>sp|IE2_HHV6U|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 NCRAN 8
NCR+N
Sbjct: 1051 NCRSN 1055
>sp|IE2_HHV6G|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain GS)
Query: 4 NCRAN 8
NCR+N
Sbjct: 1064 NCRSN 1068
>sp|VE7_HPV5B|PROTEIN E7|Human papillomavirus type 5b
Query: 4 NCRANC 9
+CR NC
Sbjct: 93 DCRGNC 98
>sp|ORF3_TTVG1|UNCHARACTERIZED ORF3 protein|Torque teno midi virus 1
Query: 5 CRANC 9
CR NC
Sbjct: 13 CRYNC 17
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1)
Query: 3 INCRANCL 10
I C +NC+
Sbjct: 59 IQCVSNCV 66
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 3 INCRANCL 10
I C +NC+
Sbjct: 59 IQCVSNCV 66
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 3 INCRANCL 10
I C +NC+
Sbjct: 59 IQCVSNCV 66
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GMINCRAN 8
G I CR+N
Sbjct: 434 GNITCRSN 441
>sp|PG187_VACCC|B1 kinase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 GMINCRA 7
G+I C+A
Sbjct: 79 GLITCKA 85
>sp|PG187_VACCA|B1 kinase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 GMINCRA 7
G+I C+A
Sbjct: 79 GLITCKA 85
>sp|PG187_MONPV|B1 kinase|Monkeypox virus (MPXV)
Query: 1 GMINCRA 7
G+I C+A
Sbjct: 79 GLITCKA 85
>sp|VE7_HPV05|PROTEIN E7|Human papillomavirus 5
Query: 4 NCRANC 9
+CR NC
Sbjct: 93 DCRGNC 98
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 3 INCRAN 8
++CRAN
Sbjct: 154 LSCRAN 159
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 3 INCRAN 8
++CRAN
Sbjct: 152 LSCRAN 157
>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5
Query: 3 INCRAN 8
++CRAN
Sbjct: 181 LSCRAN 186
>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2
Query: 3 INCRAN 8
++CRAN
Sbjct: 181 LSCRAN 186
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 3 INCRAN 8
++CRAN
Sbjct: 163 LSCRAN 168
>sp|RDRP_ROTHC|RNA-DIRECTED RNA polymerase|Rotavirus C (isolate RVC/Human/United
Query: 4 NCRANC 9
+C++NC
Sbjct: 146 SCQSNC 151
>sp|VE7_HPV25|PROTEIN E7|Human papillomavirus 25
Query: 5 CRANC 9
CR NC
Sbjct: 93 CRGNC 97
>sp|TRX1_HHV6Z|TRIPLEX capsid protein 1|Human herpesvirus 6B (strain Z29)
Query: 2 MINCRANCL 10
+++C ++CL
Sbjct: 145 LVSCGSSCL 153
>sp|TRX1_HHV6H|TRIPLEX capsid protein 1|Human herpesvirus 6B (HHV-6 variant
Query: 2 MINCRANCL 10
+++C ++CL
Sbjct: 145 LVSCGSSCL 153
>sp|TRX1_HHV6U|TRIPLEX capsid protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 MINCRANCL 10
+++C ++CL
Sbjct: 145 LVSCGSSCL 153
>sp|VE7_HPV21|PROTEIN E7|Human papillomavirus 21
Query: 5 CRANC 9
CR NC
Sbjct: 92 CRGNC 96
50|SequenceR|255|246|PYGNPGMINC
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 PYGNPGMINC 10
PY N G + C
Sbjct: 514 PYTNAGFVTC 523
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 4 NPGMINC 10
NPG+I C
Sbjct: 1648 NPGIIFC 1654
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 YGNPGMINC 10
+ NP INC
Sbjct: 289 FKNPVKINC 297
>sp|HN_MUMPM|HEMAGGLUTININ-NEURAMINIDASE virus genotype B (strain
Query: 1 PYGNPGMI 8
PYGN G+
Sbjct: 530 PYGNQGLF 537
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 YGNPGMINC 10
YGN +I+C
Sbjct: 201 YGNYTLIHC 209
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 GNPGMINC 10
GNP I C
Sbjct: 6235 GNPKAIKC 6242
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 GNPGMINC 10
GNP I C
Sbjct: 6258 GNPKAIKC 6265
>sp|TEG5_HHV2H|TEGUMENT protein UL47|Human herpesvirus 2 (strain HG52)
Query: 1 PYGNPGMI 8
P G+PG++
Sbjct: 469 PLGSPGVV 476
Query: 4 NPGMINC 10
NPG + C
Sbjct: 406 NPGAVKC 412
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 2 YGN-PGMIN 9
YG PGM+N
Sbjct: 1240 YGTAPGMVN 1248
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 2 YGN-PGMIN 9
YG PGM+N
Sbjct: 1240 YGTAPGMVN 1248
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 2 YGN-PGMIN 9
YG PGM+N
Sbjct: 1240 YGTAPGMVN 1248
>sp|VP6_ROTGI|INTERMEDIATE capsid protein VP6|Rotavirus B (isolate RVB/Rat/United
Query: 3 GNPGMINC 10
GN G++ C
Sbjct: 187 GNKGIVTC 194
>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 YGNPGMINC 10
Y NP I C
Sbjct: 589 YTNPQKIEC 597
>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 YGNPGMINC 10
Y NP I C
Sbjct: 589 YTNPQKIEC 597
>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)
Query: 2 YGNPGMINC 10
Y NP I C
Sbjct: 589 YTNPQKIEC 597
>sp|VP6_ROTGA|INTERMEDIATE capsid protein VP6|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 3 GNPGMINC 10
GN G++ C
Sbjct: 187 GNKGVVTC 194
>sp|KR2_EBVG|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PYGNPGM 7
PY NP M
Sbjct: 320 PYPNPDM 326
>sp|KR2_EBVB9|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PYGNPGM 7
PY NP M
Sbjct: 320 PYPNPDM 326
>sp|KR2_EBVA8|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PYGNPGM 7
PY NP M
Sbjct: 320 PYPNPDM 326
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 PYGNPGMIN 9
P G PG +N
Sbjct: 73 PKGYPGQVN 81
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 PYGNPGMI 8
PY NP I
Sbjct: 5195 PYPNPSRI 5202
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PYGNPGMINC 10
PY M+NC
Sbjct: 183 PYDINQMLNC 192
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PYGNPGMINC 10
PY M+NC
Sbjct: 178 PYDINQMLNC 187
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PYGNPGMINC 10
PY M+NC
Sbjct: 183 PYDINQMLNC 192
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PYGNPGMINC 10
PY M+NC
Sbjct: 183 PYDINQMLNC 192
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 PYGNPGMIN 9
P G PG +N
Sbjct: 73 PKGYPGRVN 81
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 PYGNPGMIN 9
P G PG +N
Sbjct: 73 PKGYPGRVN 81
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PYGNPGMINC 10
PY M+NC
Sbjct: 184 PYDINQMLNC 193
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PYGNPGMINC 10
PY M+NC
Sbjct: 183 PYDINQMLNC 192
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PYGNPGMINC 10
PY M+NC
Sbjct: 181 PYDINQMLNC 190
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PYGNPGMINC 10
PY M+NC
Sbjct: 178 PYDINQMLNC 187
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PYGNPGMINC 10
PY M+NC
Sbjct: 178 PYDINQMLNC 187
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PYGNPGMINC 10
PY M+NC
Sbjct: 183 PYDINQMLNC 192
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PYGNPGMINC 10
PY M+NC
Sbjct: 183 PYDINQMLNC 192
>sp|GAG_HTL1L|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 PYGNPGMIN 9
P G PG +N
Sbjct: 73 PKGYPGQVN 81
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 GNPGMINC 10
GNP I C
Sbjct: 5924 GNPKGIRC 5931
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 YGNPG 6
YG+PG
Sbjct: 1285 YGSPG 1289
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PYGNPGMINC 10
PY M+NC
Sbjct: 183 PYDINQMLNC 192
>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 PYGNPGMIN 9
P G PG +N
Sbjct: 73 PKGYPGQVN 81
>sp|GAG_HTL1M|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 PYGNPGMIN 9
P G PG +N
Sbjct: 73 PKGYPGRVN 81
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 YGNPGMINC 10
Y N +INC
Sbjct: 200 YTNYRLINC 208
>sp|GAG_HTL1C|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 PYGNPGMIN 9
P G PG +N
Sbjct: 73 PKGYPGRVN 81
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 PYGNPGMINC 10
PY N +I+C
Sbjct: 280 PYVNSLVIDC 289
>sp|GAG_HTL1A|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 PYGNPGMIN 9
P G PG +N
Sbjct: 73 PKGYPGRVN 81
>sp|VL2_HPV50|MINOR capsid protein L2|Human papillomavirus type 50
Query: 1 PYGNPG 6
P+G PG
Sbjct: 69 PFGAPG 74
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 5 PGMINC 10
PG+++C
Sbjct: 511 PGLVDC 516
>sp|VIRF1_HHV8P|VIRF-1 herpesvirus 8 type P
Query: 1 PYGNPGMI 8
P+G PG I
Sbjct: 9 PFGAPGAI 16
>sp|CAPSH_ADE06|HEXON protein|Human adenovirus C serotype 6
Query: 5 PGMINC 10
PG+++C
Sbjct: 402 PGLVDC 407
>sp|RL13_HCMVM|MEMBRANE protein RL13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 YGNPGMI 8
YG+PG +
Sbjct: 133 YGSPGWL 139
>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PYGNPGMINC 10
PY M+NC
Sbjct: 183 PYDINQMLNC 192
51|SequenceR|260|251|MASHIPYGNP
>sp|NCAP_MEASZ|NUCLEOPROTEIN virus (strain Edmonston-Zagreb vaccine)
Query: 2 ASHIPYGNP 10
A+H+P G P
Sbjct: 464 AAHLPTGTP 472
>sp|NCAP_MEASW|NUCLEOPROTEIN virus (strain Edmonston-Schwarz vaccine)
Query: 2 ASHIPYGNP 10
A+H+P G P
Sbjct: 464 AAHLPTGTP 472
>sp|NCAP_MEASM|NUCLEOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 2 ASHIPYGNP 10
A+H+P G P
Sbjct: 464 AAHLPTGTP 472
>sp|NCAP_MEASH|NUCLEOPROTEIN virus (strain Halle) (MeV)
Query: 2 ASHIPYGNP 10
A+H+P G P
Sbjct: 464 AAHLPTGTP 472
>sp|NCAP_MEASF|NUCLEOPROTEIN virus (strain Edmonston B)
Query: 2 ASHIPYGNP 10
A+H+P G P
Sbjct: 464 AAHLPTGTP 472
>sp|NCAP_MEASA|NUCLEOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 2 ASHIPYGNP 10
A+H+P G P
Sbjct: 464 AAHLPTGTP 472
>sp|NCAP_MEASE|NUCLEOPROTEIN virus (strain Edmonston) (MeV)
Query: 2 ASHIPYGNP 10
A+H+P G P
Sbjct: 464 AAHLPTGTP 472
>sp|NCAP_MEASS|NUCLEOPROTEIN virus (strain Shanghai-191 vaccine)
Query: 2 ASHIPYGNP 10
A+H+P G P
Sbjct: 464 AAHLPTGTP 472
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 3 SHIPYGN 9
SHIPY N
Sbjct: 83 SHIPYPN 89
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 SHIPYGN 9
SHIPY N
Sbjct: 83 SHIPYPN 89
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 SHIPYGN 9
SHIPY N
Sbjct: 83 SHIPYPN 89
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 3 SHIPYG 8
+HIP+G
Sbjct: 155 AHIPFG 160
>sp|PORTL_HHV8P|PORTAL protein|Human herpesvirus 8 type P
Query: 2 ASHIPYGN 9
+SHIP G+
Sbjct: 437 SSHIPSGS 444
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 ASHIPY 7
ASH+PY
Sbjct: 1712 ASHLPY 1717
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 HIPYGNP 10
++PY NP
Sbjct: 5193 YLPYPNP 5199
Query: 4 HIPYGN 9
HI YGN
Sbjct: 6684 HIVYGN 6689
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 ASHIPY 7
ASH+PY
Sbjct: 1712 ASHLPY 1717
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 ASHIPY 7
ASH+PY
Sbjct: 1712 ASHLPY 1717
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 ASHIPY 7
ASH+PY
Sbjct: 1712 ASHLPY 1717
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 ASHIPY 7
ASH+PY
Sbjct: 1712 ASHLPY 1717
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 4 HIPYGNP 10
HIP NP
Sbjct: 504 HIPMPNP 510
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 ASHIPY 7
ASH+PY
Sbjct: 1712 ASHLPY 1717
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 ASHIPY 7
A+HIPY
Sbjct: 1712 AAHIPY 1717
>sp|KR2_EBVG|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 IPYGNP 10
IPY NP
Sbjct: 319 IPYPNP 324
>sp|KR2_EBVB9|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 IPYGNP 10
IPY NP
Sbjct: 319 IPYPNP 324
>sp|KR2_EBVA8|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 IPYGNP 10
IPY NP
Sbjct: 319 IPYPNP 324
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 ASHIPY 7
A+H+PY
Sbjct: 1712 AAHVPY 1717
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 2 ASHIPYGNP 10
A+HI G P
Sbjct: 430 ATHIKVGQP 438
>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)
Query: 2 ASHIPYGNP 10
A+HI G P
Sbjct: 431 ATHIKVGQP 439
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 2 ASHIPYGNP 10
A+HI G P
Sbjct: 431 ATHIKVGQP 439
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 2 ASHIPYGNP 10
A+HI G P
Sbjct: 431 ATHIKVGQP 439
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 HIPYGNP 10
H+P NP
Sbjct: 813 HVPRRNP 819
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 HIPYGNP 10
H+P NP
Sbjct: 813 HVPRRNP 819
>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)
Query: 1 MASHIPYGN 9
+ SH+P G+
Sbjct: 102 LLSHVPEGS 110
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 2 ASHIPYGNP 10
A+HI G P
Sbjct: 426 ATHIKVGQP 434
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 2 ASHIPYGNP 10
A+HI G P
Sbjct: 426 ATHIKVGQP 434
>sp|VP6_CTFVL|UNCHARACTERIZED protein VP6|Colorado tick fever virus (strain
Query: 3 SHIPYGN 9
SH+P G+
Sbjct: 318 SHLPVGS 324
>sp|UL02_HCMVM|UNCHARACTERIZED protein UL2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 ASHIPYG 8
ASH YG
Sbjct: 25 ASHAQYG 31
>sp|UL02_HCMVA|UNCHARACTERIZED protein UL2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 ASHIPYG 8
ASH YG
Sbjct: 26 ASHAQYG 32
52|SequenceR|265|256|KQSFKMASHI
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 5 KMASHI 10
KMASHI
Sbjct: 913 KMASHI 918
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 5 KMASHI 10
KMASHI
Sbjct: 913 KMASHI 918
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 5 KMASHI 10
KMASHI
Sbjct: 908 KMASHI 913
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 5 KMASHI 10
KMASHI
Sbjct: 908 KMASHI 913
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 5 KMASHI 10
KMASHI
Sbjct: 908 KMASHI 913
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 5 KMASHI 10
KMASHI
Sbjct: 908 KMASHI 913
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 FKMASHI 10
FK+ASH+
Sbjct: 914 FKLASHM 920
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 FKMASHI 10
FK+ASH+
Sbjct: 914 FKLASHM 920
53|SequenceR|270|261|MEACGKQSFK
>sp|PHOSP_PI1HB|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 1 MEACGKQSFK 10
MEA G Q FK
Sbjct: 468 MEALGGQEFK 477
>sp|PHOSP_PI1HC|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 1 MEACGKQSFK 10
MEA G Q FK
Sbjct: 468 MEALGGQEFK 477
>sp|PHOSP_PI1HD|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 1 MEACGKQSFK 10
MEA G Q FK
Sbjct: 468 MEALGGQEFK 477
>sp|PHOSP_PI1HE|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 1 MEACGKQSFK 10
MEA G Q FK
Sbjct: 468 MEALGGQEFK 477
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 EACGKQ 7
EACGK+
Sbjct: 1082 EACGKR 1087
>sp|PG074_VAR67|PROTEIN OPG074|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 MEACG 5
MEACG
Sbjct: 614 MEACG 618
>sp|PG074_VACCC|PROTEIN OPG074|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 MEACG 5
MEACG
Sbjct: 614 MEACG 618
>sp|PG074_MONPV|PROTEIN OPG074|Monkeypox virus (MPXV)
Query: 1 MEACG 5
MEACG
Sbjct: 613 MEACG 617
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 2 EACGKQSF 9
+ CG+Q F
Sbjct: 535 QHCGRQKF 542
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 CGKQSFK 10
CGKQ+ K
Sbjct: 1789 CGKQATK 1795
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 EACGKQSFK 10
+AC K SF+
Sbjct: 203 QACSKVSFE 211
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 CGKQSFK 10
CGKQ+ K
Sbjct: 1789 CGKQATK 1795
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 EACGKQSFK 10
+AC K SF+
Sbjct: 196 QACPKTSFE 204
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 EACGKQSFK 10
+AC K SF+
Sbjct: 199 QACPKVSFQ 207
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 EACGKQSFK 10
+AC K SF+
Sbjct: 197 QACPKVSFQ 205
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 EACGKQSFK 10
+AC K SF+
Sbjct: 205 QACPKVSFQ 213
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 2 EACGKQSF 9
E C K+SF
Sbjct: 1370 ECCIKESF 1377
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 EACGKQ 7
++CGKQ
Sbjct: 2980 DSCGKQ 2985
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 EACGKQSFK 10
+AC K SF+
Sbjct: 204 QACPKVSFE 212
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 EACGKQSFK 10
+AC K SF+
Sbjct: 205 QACPKVSFE 213
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 EACGKQSFK 10
+AC K SF+
Sbjct: 204 QACPKVSFE 212
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 EACGKQSFK 10
+AC K SF+
Sbjct: 199 QACPKVSFE 207
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 EACGKQSFK 10
+AC K SF+
Sbjct: 200 QACPKVSFE 208
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 EACGKQSFK 10
+AC K SF+
Sbjct: 206 QACPKVSFE 214
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 EACGKQSFK 10
+AC K SF+
Sbjct: 204 QACPKVSFE 212
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 EACGKQSFK 10
+AC K SF+
Sbjct: 201 QACPKVSFE 209
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 EACGKQSFK 10
+AC K SF+
Sbjct: 216 QACPKVSFE 224
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 EACGKQSFK 10
+AC K SF+
Sbjct: 203 QACPKVSFE 211
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 EACGKQSFK 10
+AC K SF+
Sbjct: 201 QACPKVSFE 209
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 EACGKQSFK 10
+AC K SF+
Sbjct: 203 QACPKVSFE 211
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 EACGKQSFK 10
+AC K SF+
Sbjct: 210 QACPKVSFE 218
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 EACGKQSFK 10
+AC K SF+
Sbjct: 201 QACPKVSFE 209
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 EACGKQSFK 10
+AC K SF+
Sbjct: 203 QACPKVSFE 211
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 EACGKQSFK 10
+AC K SF+
Sbjct: 203 QACPKVSFE 211
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 EACGKQSFK 10
+AC K SF+
Sbjct: 204 QACPKVSFE 212
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 EACGKQSFK 10
+AC K SF+
Sbjct: 214 QACPKVSFE 222
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 EACGKQSFK 10
+AC K SF+
Sbjct: 208 QACPKVSFE 216
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 EACGKQSFK 10
+AC K SF+
Sbjct: 203 QACPKVSFE 211
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 EACGKQSFK 10
+AC K SF+
Sbjct: 203 QACPKVSFE 211
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 EACGKQSFK 10
+AC K SF+
Sbjct: 199 QACPKVSFE 207
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 EACGKQSFK 10
+AC K SF+
Sbjct: 206 QACPKVSFE 214
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 EACGKQSFK 10
+AC K SF+
Sbjct: 211 QACPKVSFE 219
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 EACGKQSFK 10
+AC K SF+
Sbjct: 196 QACPKVSFE 204
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 MEACGKQS 8
+E CGK++
Sbjct: 545 IEICGKKT 552
>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann
Query: 1 MEACGKQSF 9
+E CGK++
Sbjct: 207 VEKCGKENL 215
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 MEACGKQS 8
+E CGK++
Sbjct: 556 IEICGKKA 563
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 MEACGKQS 8
+E CGK++
Sbjct: 548 IEICGKKA 555
54|SequenceR|275|266|DMSIIMEACG
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 4 IIMEACG 10
IIME CG
Sbjct: 1492 IIMEECG 1498
>sp|PG074_VAR67|PROTEIN OPG074|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 MSIIMEACG 10
+ +MEACG
Sbjct: 610 LHTVMEACG 618
>sp|PG074_MONPV|PROTEIN OPG074|Monkeypox virus (MPXV)
Query: 2 MSIIMEACG 10
+ +MEACG
Sbjct: 609 LHTVMEACG 617
>sp|PG074_VACCC|PROTEIN OPG074|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 MSIIMEACG 10
+ +MEACG
Sbjct: 610 LHTVMEACG 618
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 DMSIIMEAC 9
D S+I +AC
Sbjct: 204 DTSVITQAC 212
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 4 IIMEACG 10
++ME CG
Sbjct: 1493 VVMEECG 1499
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 4 IIMEACG 10
++ME CG
Sbjct: 1493 VVMEECG 1499
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 5 IMEACG 10
IME CG
Sbjct: 1479 IMEECG 1484
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 5 IMEACG 10
IME CG
Sbjct: 1479 IMEECG 1484
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 5 IMEACG 10
IME CG
Sbjct: 1477 IMEECG 1482
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 5 IMEACG 10
IME CG
Sbjct: 1479 IMEECG 1484
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 5 IMEACG 10
IME CG
Sbjct: 1479 IMEECG 1484
>sp|NCAP_DHVI1|NUCLEOPROTEIN virus (strain Indian/1313/61) (Dho)
Query: 3 SIIMEAC 9
SI+M AC
Sbjct: 65 SIVMAAC 71
>sp|NP03_VZVO|NUCLEAR phosphoprotein UL3 homolog|Varicella-zoster virus (strain Oka
Query: 3 SIIMEAC 9
S+IM AC
Sbjct: 96 SLIMNAC 102
>sp|PG192_VACCC|PROTEIN OPG192|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 MSIIMEAC 9
+SII E+C
Sbjct: 61 ISIITESC 68
>sp|PG192_MONPV|PROTEIN OPG192|Monkeypox virus (MPXV)
Query: 2 MSIIMEAC 9
+SII E+C
Sbjct: 61 ISIITESC 68
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 DMSIIMEAC 9
+ SII E+C
Sbjct: 205 NTSIIQESC 213
>sp|US03_VZVD|SERINE/THREONINE-PROTEIN kinase US3 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 SIIMEACG 10
S IM+ CG
Sbjct: 25 SHIMQTCG 32
>sp|OBP_HHV6Z|REPLICATION origin-binding protein|Human herpesvirus 6B (strain Z29)
Query: 1 DMSIIMEAC 9
+ SII E+C
Sbjct: 367 EQSIISESC 375
>sp|OBP_HHV6U|REPLICATION origin-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 DMSIIMEAC 9
+ SII E+C
Sbjct: 367 EQSIISESC 375
55|SequenceR|280|271|HIQSSDMSII
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 1 HIQSSDMSII 10
H++ +MS+I
Sbjct: 384 HVEEYEMSLI 393
>sp|IR01_HCMVM|PROTEIN RL1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HIQSSD 6
H+Q+SD
Sbjct: 32 HVQTSD 37
>sp|IR01_HCMVA|UNCHARACTERIZED protein HKLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HIQSSD 6
H+Q+SD
Sbjct: 32 HVQTSD 37
>sp|RDRP_DHVI1|RNA-DIRECTED RNA polymerase catalytic subunit|Dhori virus (strain
Query: 1 HIQSSD 6
H++SSD
Sbjct: 422 HVESSD 427
56|SequenceR|285|276|RPDKSHIQSS
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RPDKSH 6
RPDK H
Sbjct: 803 RPDKKH 808
>sp|TRM3_HCMVA|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PDKSHIQ 8
PD++HI+
Sbjct: 567 PDQNHIE 573
>sp|TRM3_HCMVM|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PDKSHIQ 8
PD++HI+
Sbjct: 567 PDQNHIE 573
>sp|ORF23_TTVV5|PROBABLE protein VP2|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 2 PDKSHIQ 8
P K+HIQ
Sbjct: 215 PKKAHIQ 221
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 DKSHIQS 9
DK+H+ S
Sbjct: 3318 DKTHVSS 3324
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 DKSHIQS 9
DK+H+ S
Sbjct: 3318 DKTHVSS 3324
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 DKSHIQS 9
DK+H+ S
Sbjct: 3317 DKTHVSS 3323
>sp|PG162_VACCC|PROTEIN OPG162|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 RPDKSHIQ 8
RPD H++
Sbjct: 84 RPDTRHLR 91
>sp|PG162_MONPV|PROTEIN OPG162|Monkeypox virus (MPXV)
Query: 1 RPDKSHIQ 8
RPD H++
Sbjct: 84 RPDTRHLR 91
>sp|PG162_VAR67|PROTEIN OPG162|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 RPDKSHIQ 8
RPD H++
Sbjct: 84 RPDTRHLR 91
57|SequenceR|290|281|PSAGYRPDKS
>sp|GO_HCMVM|ENVELOPE glycoprotein O|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 SAGYRPDKS 10
+ GYRPD +
Sbjct: 314 TTGYRPDSN 322
>sp|GM_HHV8P|ENVELOPE glycoprotein M|Human herpesvirus 8 type P
Query: 1 PSAGYRP 7
PSA Y P
Sbjct: 333 PSAAYMP 339
>sp|NCAP_I73A4|NUCLEOPROTEIN A virus (strain A/Equine/London/1416/1973
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I01A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I89A6|NUCLEOPROTEIN A virus (strain A/Swine/Italy/839/1989
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I61A1|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I54A1|NUCLEOPROTEIN A virus (strain A/Swine/May/1954
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I05A1|NUCLEOPROTEIN A virus (strain A/Goose/Guangxi/345/2005
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I81A3|NUCLEOPROTEIN A virus (strain A/Turkey/Minnesota/1661/1981
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I85A4|NUCLEOPROTEIN A virus (strain A/Swine/Netherlands/12/1985
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I81A4|NUCLEOPROTEIN A virus (strain A/Swine/Ontario/2/1981
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I81A1|NUCLEOPROTEIN A virus (strain A/Swine/Italy/141/1981
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I80A2|NUCLEOPROTEIN A virus (strain A/Seal/Massachusetts/1/1980
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I77AC|NUCLEOPROTEIN A virus (strain A/Swine/Tennessee/24/1977
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I76AG|NUCLEOPROTEIN A virus (strain A/Swine/Italy/437/1976
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I76AF|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1976/1931
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I57A7|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1957
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I49A2|NUCLEOPROTEIN A virus (strain A/Swine/41/1949
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I37A0|NUCLEOPROTEIN A virus (strain A/Swine/29/1937
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I35A2|NUCLEOPROTEIN A virus (strain A/Swine/Ohio/23/1935
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I30A0|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/15/1930
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I01A0|NUCLEOPROTEIN A virus (strain A/Silky
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I81A0|NUCLEOPROTEIN A virus (strain A/Swine/Germany/2/1981
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I79A5|NUCLEOPROTEIN A virus (strain A/Swine/Italy/2/1979
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I42A0|NUCLEOPROTEIN A virus (strain A/Swine/Jamesburg/1942
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I03A1|NUCLEOPROTEIN A virus (strain A/Chicken/Shantou/4231/2003
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I02A6|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I02A5|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I02A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I02A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I02A1|NUCLEOPROTEIN A virus (strain A/Guinea
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I01A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I76A7|NUCLEOPROTEIN A virus (strain A/New
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I03A0|NUCLEOPROTEIN A virus (strain A/Hong
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I02A4|NUCLEOPROTEIN A virus (strain A/Silky
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I82A4|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I77A3|NUCLEOPROTEIN A virus (strain A/Duck/Bavaria/2/1977
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I59A0|NUCLEOPROTEIN A virus (strain A/Chicken/Scotland/1959
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I27A0|NUCLEOPROTEIN A virus (strain A/Fowl
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I02A7|NUCLEOPROTEIN A virus (strain A/Teal/China/2978.1/2002
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I80A1|NUCLEOPROTEIN A virus (strain A/Duck/Australia/749/1980
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I80A5|NUCLEOPROTEIN A virus (strain A/Teal/Iceland/29/1980
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I75A2|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I00A0|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I96A0|NUCLEOPROTEIN A virus (strain A/Goose/Guangdong/1/1996
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I78A3|NUCLEOPROTEIN A virus (strain A/Mallard/New
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I88A7|NUCLEOPROTEIN A virus (strain A/Wisconsin/3523/1988
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I88A5|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/17672/1988
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I97A1|NUCLEOPROTEIN A virus (strain A/Hong
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I80AA|NUCLEOPROTEIN A virus (strain A/India/6263/1980
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I96A2|NUCLEOPROTEIN A virus (strain A/USA:Memphis/10/1996
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I57A5|NUCLEOPROTEIN A virus (strain A/Singapore/1/1957
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I47A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I36A0|NUCLEOPROTEIN A virus (strain A/Henry/1936
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I96A3|NUCLEOPROTEIN A virus (strain A/China:Nanchang/11/1996
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I83A2|NUCLEOPROTEIN A virus (strain A/Ohio/4/1983
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I83A1|NUCLEOPROTEIN A virus (strain A/Chile/1/1983
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I40A0|NUCLEOPROTEIN A virus (strain A/Hickox/1940
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I34A1|NUCLEOPROTEIN A virus (strain A/Puerto
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I07A0|NUCLEOPROTEIN A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I06A0|NUCLEOPROTEIN A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I00A1|NUCLEOPROTEIN A virus (strain A/New
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I77AB|NUCLEOPROTEIN A virus (strain A/USSR/90/1977
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I18A0|NUCLEOPROTEIN A virus (strain A/Brevig
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I77AA|NUCLEOPROTEIN A virus (strain A/Brazil/11/1978
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I55A0|NUCLEOPROTEIN A virus (strain A/England/19/1955
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I54A2|NUCLEOPROTEIN A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I54A0|NUCLEOPROTEIN A virus (strain A/Leningrad/1/1954
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I51A0|NUCLEOPROTEIN A virus (strain A/USA:Albany/12/1951
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I35A1|NUCLEOPROTEIN A virus (strain A/Swine/Cambridge/1/1935
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I73A2|NUCLEOPROTEIN A virus (strain A/Memphis/4/1973
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I50A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I45A0|NUCLEOPROTEIN A virus (strain A/USA:Huston/AA/1945
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I43A0|NUCLEOPROTEIN A virus (strain A/USA:Iowa/1943
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I73A5|NUCLEOPROTEIN A virus (strain A/Port
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I72A4|NUCLEOPROTEIN A virus (strain A/Memphis/101/1972
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I35A3|NUCLEOPROTEIN A virus (strain A/USA:Phila/1935
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I90A0|NUCLEOPROTEIN A virus (strain A/Shanghai/6/1990
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I80A3|NUCLEOPROTEIN A virus (strain A/Memphis/5/1980
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I79A4|NUCLEOPROTEIN A virus (strain A/Kiev/59/1979
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I77A5|NUCLEOPROTEIN A virus (strain A/Guangdong/38/1977
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I73A3|NUCLEOPROTEIN A virus (strain A/Memphis/1/1973
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I72A2|NUCLEOPROTEIN A virus (strain A/Udorn/307/1972
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I80A0|NUCLEOPROTEIN A virus (strain A/Shanghai/31/1980
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I93A0|NUCLEOPROTEIN A virus (strain A/Kitakyushu/159/1993
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I89A4|NUCLEOPROTEIN A virus (strain A/Shanghai/16/1989
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I89A3|NUCLEOPROTEIN A virus (strain A/Guangdong/39/1989
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I89A2|NUCLEOPROTEIN A virus (strain A/Beijing/353/1989
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I89A1|NUCLEOPROTEIN A virus (strain A/Beijing/352/1989
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I89A0|NUCLEOPROTEIN A virus (strain A/Beijing/337/1989
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I88A3|NUCLEOPROTEIN A virus (strain A/Memphis/8/1988
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I88A2|NUCLEOPROTEIN A virus (strain A/Memphis/3/1988
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I87A2|NUCLEOPROTEIN A virus (strain A/Guangdong/9/1987
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I87A0|NUCLEOPROTEIN A virus (strain A/Shanghai/11/1987
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I86A1|NUCLEOPROTEIN A virus (strain A/Memphis/6/1986
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I85A0|NUCLEOPROTEIN A virus (strain A/Memphis/14/1985
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I83A8|NUCLEOPROTEIN A virus (strain A/Hong
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I83A0|NUCLEOPROTEIN A virus (strain A/Swine/Dandong/9/1983
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I80A4|NUCLEOPROTEIN A virus (strain A/Memphis/4/1980
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I78A8|NUCLEOPROTEIN A virus (strain A/Memphis/18/1978
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I78A7|NUCLEOPROTEIN A virus (strain A/Memphis/2/1978
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I78A6|NUCLEOPROTEIN A virus (strain A/California/10/1978
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I77AH|NUCLEOPROTEIN A virus (strain A/Texas/1/1977
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I77A4|NUCLEOPROTEIN A virus (strain A/Swine/Colorado/1/1977
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I76AA|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I76A6|NUCLEOPROTEIN A virus (strain A/Memphis/110/1976
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I75A0|NUCLEOPROTEIN A virus (strain A/Beijing/39/1975
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I71A1|NUCLEOPROTEIN A virus (strain A/Memphis/1/1971
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I60A0|NUCLEOPROTEIN A virus (strain A/Ann
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I33A0|NUCLEOPROTEIN A virus (strain A/Wilson-Smith/1933
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I68A4|NUCLEOPROTEIN A virus (strain A/Hong
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|NCAP_I68A6|NUCLEOPROTEIN A virus (strain A/Northern
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PSAGYRPDKS 10
PSA Y+P +S
Sbjct: 2793 PSAPYKPGQS 2802
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 PSAGYRPDKS 10
PSA Y+P +S
Sbjct: 2771 PSAPYKPGQS 2780
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 PSAGYRPDKS 10
PSA Y+P +S
Sbjct: 2766 PSAPYKPGQS 2775
>sp|GO_HCMVA|GLYCOPROTEIN O|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 SAGYRPDKS 10
+ YRPD S
Sbjct: 308 TIAYRPDSS 316
>sp|NCAP_I68A2|NUCLEOPROTEIN A virus (strain A/Victoria/5/1968
Query: 1 PSAGYRPDKS 10
PSAG P K+
Sbjct: 83 PSAGKDPKKT 92
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 PSAGYRPDK 9
P AG PD+
Sbjct: 470 PGAGVPPDR 478
>sp|NRAM_I56A3|NEURAMINIDASE A virus (strain A/Equine/Prague/1/1956
Query: 1 PSAGYRPD 8
P+AG PD
Sbjct: 378 PNAGTDPD 385
>sp|TEG3_HHV2H|TEGUMENT protein UL14|Human herpesvirus 2 (strain HG52)
Query: 1 PSAGYRPD 8
PSA RPD
Sbjct: 175 PSAAGRPD 182
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 1 PSAGYRPD 8
P GY PD
Sbjct: 628 PYLGYNPD 635
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 1 PSAGYRPD 8
P GY PD
Sbjct: 628 PYLGYNPD 635
>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 5 YRPDKS 10
Y PDKS
Sbjct: 69 YTPDKS 74
>sp|ALT2B_EMCVR|PROTEIN 2B*|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 5 YRPDKS 10
Y+PDKS
Sbjct: 117 YKPDKS 122
>sp|ALT2B_EMCV|PROTEIN 2B*|Encephalomyocarditis virus
Query: 5 YRPDKS 10
Y+PDKS
Sbjct: 117 YKPDKS 122
58|SequenceR|295|286|KAWHLPSAGY
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 KAWHLPS 7
K+WHLPS
Sbjct: 254 KSWHLPS 260
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 KAWHLPS 7
K+WHLPS
Sbjct: 256 KSWHLPS 262
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 KAWHLPS 7
K+WHLPS
Sbjct: 256 KSWHLPS 262
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 KAWHLPS 7
K+WHLPS
Sbjct: 256 KSWHLPS 262
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 KAWHLPS 7
++WHLPS
Sbjct: 256 RSWHLPS 262
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 KAWHLPS 7
++WHLPS
Sbjct: 256 RSWHLPS 262
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 KAWHLPS 7
++WHLPS
Sbjct: 256 RSWHLPS 262
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 KAWHLPS 7
++WHLPS
Sbjct: 256 RSWHLPS 262
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 KAWHLPS 7
++WHLPS
Sbjct: 255 RSWHLPS 261
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 KAWHLPS 7
++WHLPS
Sbjct: 255 RSWHLPS 261
Query: 2 AWHLPS 7
AW LPS
Sbjct: 1678 AWSLPS 1683
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 KAWHLPS 7
++WHLPS
Sbjct: 257 RSWHLPS 263
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 KAWHLPS 7
++WHLPS
Sbjct: 256 QSWHLPS 262
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 KAWHLPS 7
++WHLPS
Sbjct: 256 QSWHLPS 262
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 KAWHLPS 7
++WHLPS
Sbjct: 256 QSWHLPS 262
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 KAWHLPS 7
++WHLPS
Sbjct: 257 QSWHLPS 263
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 KAWHLPS 7
++WHLPS
Sbjct: 257 QSWHLPS 263
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 KAWHLPS 7
++WHLPS
Sbjct: 254 QSWHLPS 260
>sp|GH_EBVG|ENVELOPE glycoprotein H|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 AWHLPS 7
AWHLP+
Sbjct: 526 AWHLPA 531
>sp|GH_EBVB9|ENVELOPE glycoprotein H|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 AWHLPS 7
AWHLP+
Sbjct: 526 AWHLPA 531
>sp|GH_EBVA8|ENVELOPE glycoprotein H|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 AWHLPS 7
AWHLP+
Sbjct: 526 AWHLPA 531
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 KAWHLPS 7
++WHLP+
Sbjct: 254 RSWHLPN 260
Query: 3 WHLPSA 8
W +PSA
Sbjct: 1737 WSIPSA 1742
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 KAWHLPS 7
++WHLP+
Sbjct: 254 RSWHLPN 260
Query: 3 WHLPSA 8
W +PSA
Sbjct: 1738 WSIPSA 1743
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 KAWHLPS 7
++WHLP+
Sbjct: 254 RSWHLPN 260
Query: 3 WHLPSA 8
W +PSA
Sbjct: 1730 WSIPSA 1735
Query: 3 WHLPSA 8
W +PSA
Sbjct: 1751 WSIPSA 1756
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 KAWHLPS 7
++WHLP+
Sbjct: 254 RSWHLPN 260
Query: 3 WHLPSA 8
W +PSA
Sbjct: 1722 WSIPSA 1727
>sp|BARF1_EBVG|SECRETED protein BARF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 KAWHLP 6
K WHLP
Sbjct: 193 KPWHLP 198
>sp|BARF1_EBVB9|SECRETED protein BARF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 KAWHLP 6
K WHLP
Sbjct: 193 KPWHLP 198
>sp|BARF1_EBVA8|SECRETED protein BARF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 KAWHLP 6
K WHLP
Sbjct: 193 KPWHLP 198
>sp|CEP2_HHV11|CYTOPLASMIC envelopment protein 2|Human herpesvirus 1 (strain 17)
Query: 3 WHLPSA 8
WHLPS
Sbjct: 201 WHLPSG 206
>sp|K1_HHV8P|PROTEIN K1|Human herpesvirus 8 type P
Query: 3 WHLPSA 8
WHLP+
Sbjct: 127 WHLPNG 132
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 LPSAGY 10
LPS+GY
Sbjct: 55 LPSSGY 60
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 LPSAGY 10
LPS+GY
Sbjct: 55 LPSSGY 60
>sp|GD_HHV1H|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain HZT)
Query: 3 WHLPS 7
WH+PS
Sbjct: 318 WHIPS 322
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 AWHLPS 7
AW LPS
Sbjct: 1848 AWFLPS 1853
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 AWHLPS 7
AW LPS
Sbjct: 1848 AWFLPS 1853
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 AWHLPS 7
AW LPS
Sbjct: 1848 AWFLPS 1853
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 AWHLPS 7
AW LPS
Sbjct: 1848 AWFLPS 1853
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 AWHLPS 7
AW LPS
Sbjct: 1848 AWFLPS 1853
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 AWHLPS 7
AW LPS
Sbjct: 1848 AWFLPS 1853
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 AWHLPS 7
AW LPS
Sbjct: 1848 AWFLPS 1853
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 AWHLPS 7
AW LPS
Sbjct: 1848 AWFLPS 1853
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 AWHLPS 7
AW LPS
Sbjct: 1848 AWFLPS 1853
>sp|GD_HHV1F|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain F)
Query: 3 WHLPS 7
WH+PS
Sbjct: 319 WHIPS 323
>sp|GD_HHV1A|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Angelotti)
Query: 3 WHLPS 7
WH+PS
Sbjct: 319 WHIPS 323
>sp|GD_HHV1P|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Patton)
Query: 3 WHLPS 7
WH+PS
Sbjct: 319 WHIPS 323
>sp|GD_HHV1K|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain KOS)
Query: 3 WHLPS 7
WH+PS
Sbjct: 319 WHIPS 323
>sp|GD_HHV11|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain 17)
Query: 3 WHLPS 7
WH+PS
Sbjct: 319 WHIPS 323
>sp|GD_HHV2H|ENVELOPE glycoprotein D|Human herpesvirus 2 (strain HG52)
Query: 3 WHLPS 7
WH+PS
Sbjct: 319 WHIPS 323
>sp|GD_HHV23|ENVELOPE glycoprotein D|Human herpesvirus 2 (strain 333)
Query: 3 WHLPS 7
WH+PS
Sbjct: 319 WHIPS 323
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 AWHLPS 7
AW LPS
Sbjct: 1843 AWFLPS 1848
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 KAWHLPSAGY 10
KA LP GY
Sbjct: 1157 KAIVLPQGGY 1166
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 KAWHLPSAGY 10
KA LP GY
Sbjct: 1177 KAIVLPQGGY 1186
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 KAWHLPSAGY 10
KA LP GY
Sbjct: 1157 KAIVLPQGGY 1166
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 KAWHLPSAGY 10
KA LP GY
Sbjct: 1177 KAIVLPQGGY 1186
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 3 WHLPSA 8
WH P+A
Sbjct: 1087 WHKPTA 1092
>sp|S1_FOAMV|PUTATIVE uncharacterized protein S1|Human spumaretrovirus (SFVcpz(hu))
Query: 3 WHLPS 7
WH PS
Sbjct: 52 WHKPS 56
>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28
Query: 1 KAWHLPSAGY 10
+ + LP +GY
Sbjct: 129 RLFQLPDSGY 138
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 3 WHLPSAGY 10
W + SAG+
Sbjct: 140 WEMQSAGW 147
>sp|GD_CHV1|ENVELOPE glycoprotein D|Cercopithecine herpesvirus 1 (CeHV-1) (Simian
Query: 3 WHLPSA 8
WH+P A
Sbjct: 320 WHVPEA 325
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 3 WHLPSAGY 10
W + SAG+
Sbjct: 140 WEMQSAGW 147
>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3
Query: 1 KAWHLPSAGY 10
+ + LP +GY
Sbjct: 126 RLFELPDSGY 135
>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35
Query: 1 KAWHLPSAGY 10
+ + LP +GY
Sbjct: 125 RLFELPDSGY 134
>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31
Query: 1 KAWHLPSAGY 10
+ + LP +GY
Sbjct: 124 RLFELPDSGY 133
>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29
Query: 1 KAWHLPSAGY 10
+ + LP +GY
Sbjct: 127 RLFQLPDSGY 136
>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10
Query: 1 KAWHLPSAGY 10
+ + LP +GY
Sbjct: 129 RLFELPDSGY 138
59|SequenceR|300|291|AMEANKAWHL
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 AMEANKAW 8
A EAN+AW
Sbjct: 1432 AREANEAW 1439
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 MEANKAWH 9
++AN WH
Sbjct: 5796 LKANPLWH 5803
>sp|VE2_HPV5B|REGULATORY protein E2|Human papillomavirus type 5b
Query: 2 MEANKAWH 9
M+A+ WH
Sbjct: 140 MDADDKWH 147
>sp|VE2_HPV05|REGULATORY protein E2|Human papillomavirus 5
Query: 2 MEANKAWH 9
M+A+ WH
Sbjct: 140 MDADDKWH 147
>sp|CVC1_HHV6Z|CAPSID vertex component 1|Human herpesvirus 6B (strain Z29)
Query: 5 NKAWHL 10
NK+W L
Sbjct: 391 NKSWEL 396
>sp|CVC1_HHV6U|CAPSID vertex component 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 NKAWHL 10
NK+W L
Sbjct: 391 NKSWEL 396
>sp|VGP_MABVR|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 MEANKAW 8
+EA+K W
Sbjct: 64 LEASKRW 70
>sp|VGP_MABVP|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 MEANKAW 8
+EA+K W
Sbjct: 64 LEASKRW 70
>sp|VGP_MABVO|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 MEANKAW 8
+EA+K W
Sbjct: 64 LEASKRW 70
>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 MEANKAW 8
+EA+K W
Sbjct: 64 LEASKRW 70
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 1 AMEANKAWH 9
A+ AN+ W+
Sbjct: 355 ALVANEGWN 363
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 1 AMEANKAWH 9
A+ AN+ W+
Sbjct: 355 ALVANEGWN 363
60|SequenceR|305|296|KLLMRAMEAN
***** No hits found ******
61|SequenceR|310|301|VNCGRKLLMR
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 2 NCGRKLLMR 10
+CG KLL R
Sbjct: 962 DCGGKLLCR 970
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 2 NCGRKLLMR 10
+CG KLL R
Sbjct: 962 DCGGKLLCR 970
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 VNCGRKLLMR 10
+ C KLLM+
Sbjct: 2082 ITCDEKLLMQ 2091
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 VNCGRKLLMR 10
+ C R+LL++
Sbjct: 2285 IGCERRLLLK 2294
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 1 VNCGRKLL 8
V+CG+K L
Sbjct: 164 VSCGKKTL 171
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 4 GRKLLM 9
GRK+LM
Sbjct: 4163 GRKMLM 4168
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 GRKLLM 9
GRK+LM
Sbjct: 4163 GRKMLM 4168
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 NCGRKLL 8
+CG+KL+
Sbjct: 1784 SCGKKLI 1790
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 NCGRKLL 8
+CG+KL+
Sbjct: 1784 SCGKKLI 1790
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 1 VNCGRKLLMR 10
V CG K+L++
Sbjct: 949 VICGGKMLIK 958
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 1 VNCGRKLLMR 10
V CG K+L++
Sbjct: 949 VICGGKMLIK 958
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 2 NCGRKLLMR 10
+CG KLL +
Sbjct: 971 DCGGKLLCK 979
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 2 NCGRKLLMR 10
+CG KLL +
Sbjct: 955 DCGGKLLCK 963
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 2 NCGRKLLMR 10
+CG KLL +
Sbjct: 958 DCGGKLLCK 966
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 2 NCGRKLLMR 10
+CG KLL +
Sbjct: 950 DCGGKLLCK 958
>sp|VE6_HPV14|PROTEIN E6|Human papillomavirus 14
Query: 3 CGRKL 7
CGRKL
Sbjct: 147 CGRKL 151
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 VNCGRKL 7
+NC RK+
Sbjct: 1290 INCVRKI 1296
>sp|LF1_EBVG|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 NCGRKLL 8
NCG K L
Sbjct: 394 NCGHKPL 400
>sp|LF1_EBVB9|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 NCGRKLL 8
NCG K L
Sbjct: 394 NCGHKPL 400
>sp|LF1_EBVA8|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 NCGRKLL 8
NCG K L
Sbjct: 394 NCGHKPL 400
>sp|UL01_HCMVM|GLYCOPROTEIN UL1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VNCGRKLLM 9
V C KLL+
Sbjct: 3 VQCNSKLLL 11
62|SequenceR|315|306|SSTSNVNCGR
>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35
Query: 3 TSNVNCGR 10
TSN+N G+
Sbjct: 551 TSNINAGK 558
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SSTSNVNCG 9
S T+NVN G
Sbjct: 693 SHTNNVNVG 701
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SSTSNVNCG 9
S T+NVN G
Sbjct: 693 SHTNNVNVG 701
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 2 STSNVNCG 9
S N NCG
Sbjct: 441 SIYNTNCG 448
>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31
Query: 3 TSNVNCGR 10
TSN+N G+
Sbjct: 545 TSNINAGK 552
>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16
Query: 3 TSNVNCG 9
TSN+N G
Sbjct: 565 TSNINAG 571
63|SequenceR|320|311|ATNGASSTSN
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 3 NGASSTSN 10
NGASSTS+
Sbjct: 267 NGASSTSS 274
>sp|NEF_HV1ZH|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 ATNGASSTSN 10
A +GA S+SN
Sbjct: 37 AKHGAISSSN 46
>sp|VIE1_HCMVT|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 ATNGASSTSN 10
AT GASS+ +
Sbjct: 390 ATRGASSSDS 399
64|SequenceR|325|316|VAVHLATNGA
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 2 AVHLATNGA 10
AVH +NGA
Sbjct: 1769 AVHFISNGA 1777
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 VAVHLATNG 9
VA+H+ NG
Sbjct: 1668 VAIHVGGNG 1676
Query: 3 VHLATN 8
+HLATN
Sbjct: 1610 MHLATN 1615
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 VAVHLATNGA 10
+ +H+ NGA
Sbjct: 1712 IGIHVGGNGA 1721
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VAVHLATN 8
VAVH+A++
Sbjct: 1223 VAVHVASD 1230
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 VAVHLATNGA 10
V+ HL NG+
Sbjct: 255 VSTHLLLNGS 264
>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)
Query: 1 VAVHLATNG 9
+ +HL +NG
Sbjct: 662 IMLHLISNG 670
>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 VAVHLATNG 9
+ +HL +NG
Sbjct: 662 IMLHLISNG 670
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 VAVHLATNGA 10
+A HL T G
Sbjct: 113 LAFHLTTRGG 122
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 VAVHLATNGA 10
+A HL T G
Sbjct: 113 LAFHLTTRGG 122
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 VAVHLATNGA 10
+A HL T G
Sbjct: 113 LAFHLTTRGG 122
>sp|NCAP_LBV|NUCLEOPROTEIN bat virus (LBV)
Query: 2 AVHLATNG 9
+H+AT G
Sbjct: 93 GIHIATKG 100
65|SequenceR|330|321|FRNRMVAVHL
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 2 RNRMVAVHL 10
RNR VHL
Sbjct: 396 RNRYHRVHL 404
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 2 RNRMVAVHL 10
RNR VHL
Sbjct: 396 RNRYHRVHL 404
>sp|RIR2_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 RNRMVAVHL 10
RNR A H+
Sbjct: 22 RNRWFAAHI 30
>sp|RIR2_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 RNRMVAVHL 10
RNR A H+
Sbjct: 22 RNRWFAAHI 30
>sp|RIR2_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 RNRMVAVHL 10
RNR A H+
Sbjct: 22 RNRWFAAHI 30
>sp|VP24_EBOZ5|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 FRNRMVAVHL 10
F NR+ A+H+
Sbjct: 160 FINRLDALHV 169
66|SequenceR|335|326|VIACDFRNRM
>sp|LANA1_HHV8P|PROTEIN LANA1|Human herpesvirus 8 type P
Query: 4 CDFRNR 9
CDF NR
Sbjct: 227 CDFANR 232
>sp|GLYC_LYCVA|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 2 IACDFRN 8
++CDF N
Sbjct: 158 VSCDFNN 164
>sp|GLYC_LYCVW|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 2 IACDFRN 8
++CDF N
Sbjct: 158 VSCDFNN 164
>sp|PG069_MONPV|PROTEIN OPG069|Monkeypox virus (MPXV)
Query: 5 DFRNR 9
DFRNR
Sbjct: 49 DFRNR 53
>sp|PG069_VACCC|PROTEIN OPG069|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 DFRNR 9
DFRNR
Sbjct: 49 DFRNR 53
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 VIACDFRN 8
+ CD RN
Sbjct: 3050 ITECDLRN 3057
>sp|GC_HHV1K|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain KOS)
Query: 2 IACDFRN 8
I C FRN
Sbjct: 142 IRCRFRN 148
>sp|GC_HHV11|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain 17)
Query: 2 IACDFRN 8
I C FRN
Sbjct: 142 IRCRFRN 148
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 2 IACDFRNRM 10
I CD++ ++
Sbjct: 853 ITCDYKTKV 861
>sp|PG163_MONPV|PROTEIN OPG163|Monkeypox virus (MPXV)
Query: 1 VIACDF 6
+IACD+
Sbjct: 92 IIACDY 97
>sp|PG163_VACCC|PROTEIN OPG163|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VIACDF 6
+IACD+
Sbjct: 92 IIACDY 97
67|SequenceR|340|331|GHTLLVIACD
>sp|VB18_VARV|ANKYRIN repeat protein B18|Variola virus
Query: 1 GHTLLVIACD 10
G TLL IAC+
Sbjct: 328 GKTLLHIACE 337
>sp|VB18_VAR67|ANKYRIN repeat protein B18|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 GHTLLVIACD 10
G TLL IAC+
Sbjct: 328 GKTLLHIACE 337
>sp|VB18_VACCA|ANKYRIN repeat protein B18|Vaccinia virus (strain Ankara) (VACV)
Query: 1 GHTLLVIACD 10
G TLL +AC+
Sbjct: 328 GKTLLHVACE 337
>sp|VB18_VACCC|ANKYRIN repeat protein B18|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 GHTLLVIACD 10
G TLL +AC+
Sbjct: 328 GKTLLHVACE 337
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GHTLLVIACD 10
GH L V+A D
Sbjct: 857 GHDLTVVAGD 866
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GHTLLVIACD 10
GH L V+A D
Sbjct: 857 GHDLTVVAGD 866
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GHTLLVIACD 10
GH L V+A D
Sbjct: 857 GHDLTVVAGD 866
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GHTLLVIACD 10
GH L V+A D
Sbjct: 857 GHDLTVVAGD 866
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GHTLLVIACD 10
GH L V+A D
Sbjct: 857 GHDLTVVAGD 866
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 GHTLLVIAC 9
G T V+AC
Sbjct: 3372 GQTFSVLAC 3380
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 GHTLLVIAC 9
G T V+AC
Sbjct: 3372 GQTFSVLAC 3380
>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P
Query: 1 GHTLLVIAC 9
GH +L++ C
Sbjct: 266 GHEILLLVC 274
>sp|AN_HCMVM|ALKALINE nuclease|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GHTLLVIAC 9
G TLLV C
Sbjct: 265 GRTLLVEPC 273
>sp|AN_HCMVA|ALKALINE nuclease|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GHTLLVIAC 9
G TLLV C
Sbjct: 265 GRTLLVEPC 273
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 GHTLLVIAC 9
G T V+AC
Sbjct: 3349 GQTFSVLAC 3357
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 GHTLLVIAC 9
G T V+AC
Sbjct: 3349 GQTFSVLAC 3357
>sp|CEP1_HHV11|CYTOPLASMIC envelopment protein 1|Human herpesvirus 1 (strain 17)
Query: 2 HTLLVIACD 10
TLL +AC+
Sbjct: 36 QTLLRLACE 44
>sp|RL12_HCMVM|UNCHARACTERIZED protein RL12|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 TLLVIAC 9
TL+ IAC
Sbjct: 372 TLICIAC 378
>sp|PKG2_ADE05|PACKAGING protein 2|Human adenovirus C serotype 5
Query: 1 GHTLLVIAC 9
GH ++AC
Sbjct: 129 GHKNAIVAC 137
>sp|PKG2_ADE02|PACKAGING protein 2|Human adenovirus C serotype 2
Query: 1 GHTLLVIAC 9
GH ++AC
Sbjct: 128 GHKNAIVAC 136
>sp|TRX2_HHV6Z|TRIPLEX capsid protein 2|Human herpesvirus 6B (strain Z29)
Query: 2 HTLLVIAC 9
H++L+I C
Sbjct: 221 HSMLLIKC 228
>sp|PG082_VARV|TELOMERE-BINDING protein OPG082|Variola virus
Query: 2 HTLLVIACD 10
+T+LVIA D
Sbjct: 308 NTILVIAKD 316
>sp|PG082_VAR67|TELOMERE-BINDING protein OPG082|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 HTLLVIACD 10
+T+LVIA D
Sbjct: 308 NTILVIAKD 316
>sp|PG082_VACCC|TELOMERE-BINDING protein OPG082|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 HTLLVIACD 10
+T+LVIA D
Sbjct: 308 NTILVIAKD 316
>sp|UL120_HCMVM|MEMBRANE protein UL120|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GHTLLVIA 8
G TLLV+A
Sbjct: 5 GVTLLVVA 12
>sp|UL120_HCMVA|UNCHARACTERIZED protein UL120|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GHTLLVIA 8
G TLLV+A
Sbjct: 5 GVTLLVVA 12
>sp|TRX2_HHV6U|TRIPLEX capsid protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 HTLLVIAC 9
H++L+I C
Sbjct: 221 HSMLLIKC 228
68|SequenceR|345|336|ADANAGHTLL
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 2 DANAGHTL 9
DAN GH L
Sbjct: 722 DANNGHAL 729
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 2 DANAGHTL 9
DAN GH L
Sbjct: 722 DANNGHAL 729
>sp|SPI1_MONPV|SERINE proteinase inhibitor 1|Monkeypox virus (MPXV)
Query: 4 NAGHTLL 10
N GHTL
Sbjct: 343 NTGHTLF 349
>sp|GLYC_CHAVB|PRE-GLYCOPROTEIN polyprotein GP complex|Chapare mammarenavirus (isolate
Query: 3 ANAGHTL 9
ANAGH +
Sbjct: 238 ANAGHAV 244
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 1 ADANAGHT 8
ADA A HT
Sbjct: 775 ADALAAHT 782
>sp|POLG_HCVH8|GENOME polyprotein|Hepatitis C virus (isolate HCT18)
Query: 1 ADANAGHTL 9
+ NAGHT+
Sbjct: 272 SGGNAGHTM 280
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 2 DANAGHTL 9
+AN GH L
Sbjct: 720 NANNGHAL 727
69|SequenceR|350|341|GHEGRADANA
>sp|L_LYCVW|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain WE)
Query: 1 GHEGRADAN 9
GHE +DAN
Sbjct: 306 GHERGSDAN 314
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 HEGRAD 7
HEGR D
Sbjct: 1957 HEGRTD 1962
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 2 HEGRADA 8
+EGR DA
Sbjct: 274 YEGRVDA 280
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 2 HEGRADA 8
+EGR DA
Sbjct: 274 YEGRVDA 280
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 5 RADANA 10
RADANA
Sbjct: 721 RADANA 726
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 5 RADANA 10
RADANA
Sbjct: 721 RADANA 726
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 2 HEGRAD 7
H+GRAD
Sbjct: 58 HDGRAD 63
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 3 EGRADANA 10
+GR DA+A
Sbjct: 442 KGRCDASA 449
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 2 HEGRADAN 9
HEG D N
Sbjct: 580 HEGLLDCN 587
70|SequenceR|355|346|HLPTNGHEGR
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 PTNGHEGR 10
P N HEG+
Sbjct: 1609 PHNSHEGK 1616
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 PTNGHEGR 10
P N HEG+
Sbjct: 1609 PHNSHEGK 1616
>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 PTNGHE 8
P NGHE
Sbjct: 454 PNNGHE 459
>sp|GL_HHV11|ENVELOPE glycoprotein L|Human herpesvirus 1 (strain 17)
Query: 3 PTNGHEGR 10
PTNG GR
Sbjct: 168 PTNGTSGR 175
>sp|NEC2_HHV8P|NUCLEAR egress protein 2|Human herpesvirus 8 type P
Query: 2 LPTNGHEGR 10
PTNG + R
Sbjct: 203 FPTNGRDAR 211
>sp|GL_HHV1K|ENVELOPE glycoprotein L|Human herpesvirus 1 (strain KOS)
Query: 3 PTNGHEGR 10
PTNG GR
Sbjct: 168 PTNGTSGR 175
>sp|ORF27_HHV8P|PROTEIN ORF27|Human herpesvirus 8 type P
Query: 2 LPTNGHEG 9
LP+N H G
Sbjct: 67 LPSNSHNG 74
>sp|VE4_HPV05|PROTEIN E4|Human papillomavirus 5
Query: 4 TNGHEG 9
TNGHEG
Sbjct: 196 TNGHEG 201
>sp|UL32_EBVB9|PACKAGING protein UL32 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 HLPTNGHEG 9
+LP N EG
Sbjct: 68 YLPANAEEG 76
>sp|VE4_HPV5B|PROTEIN E4|Human papillomavirus type 5b
Query: 4 TNGHEG 9
TNGHEG
Sbjct: 196 TNGHEG 201
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LPTNGHEGR 10
PT H GR
Sbjct: 367 FPTKYHSGR 375
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LPTNGHEGR 10
PT H GR
Sbjct: 367 FPTKYHSGR 375
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LPTNGHEGR 10
PT H GR
Sbjct: 367 FPTKYHSGR 375
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LPTNGHEGR 10
PT H GR
Sbjct: 367 FPTKYHSGR 375
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LPTNGHEGR 10
PT H GR
Sbjct: 367 FPTKYHSGR 375
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LPTNGHEGR 10
PT H GR
Sbjct: 367 FPTKYHSGR 375
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LPTNGHEGR 10
PT H GR
Sbjct: 367 FPTKYHSGR 375
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LPTNGHEGR 10
PT H GR
Sbjct: 367 FPTKYHSGR 375
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LPTNGHEGR 10
PT H GR
Sbjct: 367 FPTKYHSGR 375
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LPTNGHEGR 10
PT H GR
Sbjct: 367 FPTKYHSGR 375
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 2 LPTNGHEG 9
LP GH+G
Sbjct: 776 LPDGGHDG 783
>sp|NCAP_I73A4|NUCLEOPROTEIN A virus (strain A/Equine/London/1416/1973
Query: 2 LPTNGHEGR 10
L N HEGR
Sbjct: 47 LKLNDHEGR 55
>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)
Query: 2 LPTNGHEG 9
LP GH+G
Sbjct: 771 LPDGGHDG 778
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 2 LPTNGHEG 9
LP GH+G
Sbjct: 776 LPDGGHDG 783
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LPTNGHEGR 10
PT H GR
Sbjct: 367 FPTKYHSGR 375
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LPTNGHEGR 10
PT H GR
Sbjct: 346 FPTKYHSGR 354
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 6 GHEGR 10
GHEGR
Sbjct: 1294 GHEGR 1298
>sp|TRX2_HCMVM|TRIPLEX capsid protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HLPTNG 6
H+PT+G
Sbjct: 84 HVPTHG 89
>sp|TRX2_HCMVA|TRIPLEX capsid protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HLPTNG 6
H+PT+G
Sbjct: 84 HVPTHG 89
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 3 PTNGHEGR 10
PTN H G+
Sbjct: 220 PTNEHGGQ 227
>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16
Query: 4 TNGHEG 9
TNG EG
Sbjct: 7 TNGEEG 12
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 PTNGH 7
P NGH
Sbjct: 1299 PANGH 1303
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 PTNGH 7
P NGH
Sbjct: 1336 PANGH 1340
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 PTNGH 7
P NGH
Sbjct: 1356 PANGH 1360
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 PTNGH 7
P NGH
Sbjct: 1386 PANGH 1390
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 PTNGH 7
P NGH
Sbjct: 1299 PANGH 1303
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 PTNGH 7
P NGH
Sbjct: 1336 PANGH 1340
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 PTNGH 7
P NGH
Sbjct: 1356 PANGH 1360
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 PTNGH 7
P NGH
Sbjct: 1386 PANGH 1390
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 HLPTNGH 7
+ PT GH
Sbjct: 644 NFPTQGH 650
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 5 NGHEG 9
NGH+G
Sbjct: 897 NGHDG 901
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 HLPTNGH 7
H P N H
Sbjct: 1570 HTPLNNH 1576
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 HLPTNGH 7
H P N H
Sbjct: 1570 HTPLNNH 1576
71|SequenceR|360|351|KSMALHLPTN
>sp|UL84_HCMVT|UL84 protein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 MALHLP 8
MALHLP
Sbjct: 262 MALHLP 267
>sp|NCAP_MEASY|NUCLEOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 4 ALHLPTN 10
A HLPT+
Sbjct: 464 AAHLPTD 470
>sp|UL79_HCMVM|PROTEIN UL79|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 ALHLPT 9
ALH+PT
Sbjct: 285 ALHMPT 290
>sp|UL79_HCMVA|PROTEIN UL79|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 ALHLPT 9
ALH+PT
Sbjct: 285 ALHMPT 290
>sp|NCAP_MEASI|NUCLEOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 4 ALHLPTN 10
A HLPT+
Sbjct: 464 AAHLPTD 470
>sp|VL1_HPV48|MAJOR capsid protein L1|Human papillomavirus type 48
Query: 1 KSMALHLPT 9
KSMA PT
Sbjct: 436 KSMATKCPT 444
>sp|NCAP_MEASZ|NUCLEOPROTEIN virus (strain Edmonston-Zagreb vaccine)
Query: 4 ALHLPT 9
A HLPT
Sbjct: 464 AAHLPT 469
>sp|NCAP_MEASW|NUCLEOPROTEIN virus (strain Edmonston-Schwarz vaccine)
Query: 4 ALHLPT 9
A HLPT
Sbjct: 464 AAHLPT 469
>sp|NCAP_MEASM|NUCLEOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 4 ALHLPT 9
A HLPT
Sbjct: 464 AAHLPT 469
>sp|NCAP_MEASH|NUCLEOPROTEIN virus (strain Halle) (MeV)
Query: 4 ALHLPT 9
A HLPT
Sbjct: 464 AAHLPT 469
>sp|NCAP_MEASF|NUCLEOPROTEIN virus (strain Edmonston B)
Query: 4 ALHLPT 9
A HLPT
Sbjct: 464 AAHLPT 469
>sp|NCAP_MEASA|NUCLEOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 4 ALHLPT 9
A HLPT
Sbjct: 464 AAHLPT 469
>sp|NCAP_MEASE|NUCLEOPROTEIN virus (strain Edmonston) (MeV)
Query: 4 ALHLPT 9
A HLPT
Sbjct: 464 AAHLPT 469
>sp|NCAP_MEASS|NUCLEOPROTEIN virus (strain Shanghai-191 vaccine)
Query: 4 ALHLPT 9
A HLPT
Sbjct: 464 AAHLPT 469
72|SequenceR|365|356|MEVNDKSMAL
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 2 EVNDKSMAL 10
E+NDKS+ L
Sbjct: 1893 ELNDKSIGL 1901
>sp|CAPSD_LORDV|CAPSID protein VP1|Lordsdale virus (strain GII/Human/United
Query: 2 EVNDKSMAL 10
EVN++ MAL
Sbjct: 21 EVNNEVMAL 29
>sp|YVED_VACCC|UNCHARACTERIZED 7.6 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 MEVNDKSM 8
MEVN+K +
Sbjct: 1 MEVNNKKL 8
73|SequenceR|370|361|ILAKIMEVND
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 2 LAKIMEVN 9
L KIM+VN
Sbjct: 50 LEKIMQVN 57
>sp|TRM2_HCMVM|TRIPARTITE terminase subunit 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ILAKIMEVN 9
I++K+M++N
Sbjct: 136 IVSKLMDIN 144
>sp|TRM2_HCMVA|TRIPARTITE terminase subunit 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ILAKIMEVN 9
I++K+M++N
Sbjct: 136 IVSKLMDIN 144
74|SequenceR|375|366|EAGFVILAKI
>sp|PB2_I000F|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Weybridge
Query: 3 GFVILAK 9
GF+ILAK
Sbjct: 693 GFLILAK 699
>sp|US03_VZVD|SERINE/THREONINE-PROTEIN kinase US3 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 EAGFVIL 7
+AGFVIL
Sbjct: 90 KAGFVIL 96
75|SequenceR|380|371|NPTDVEAGFV
>sp|MATRX_PI2HT|MATRIX protein|Human parainfluenza 2 virus (strain
Query: 1 NPTDVEAGF 9
NP+ ++AGF
Sbjct: 156 NPSKLQAGF 164
>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1
Query: 2 PTDVEAGF 9
P D EAGF
Sbjct: 547 PVDDEAGF 554
>sp|PG067_VARV|PROTEIN OPG067|Variola virus
Query: 4 DVEAGFV 10
DVE GF+
Sbjct: 278 DVENGFI 284
>sp|PG067_VAR67|PROTEIN OPG067|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 DVEAGFV 10
DVE GF+
Sbjct: 278 DVENGFI 284
>sp|PG067_VACCD|PROTEIN OPG067|Vaccinia virus (strain Dairen I)
Query: 4 DVEAGFV 10
DVE GF+
Sbjct: 278 DVENGFI 284
>sp|PG067_VACCC|PROTEIN OPG067|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 DVEAGFV 10
DVE GF+
Sbjct: 278 DVENGFI 284
>sp|VFLIP_HHV8P|VIRAL FLICE protein|Human herpesvirus 8 type P
Query: 2 PTDVEA 7
PTDV+A
Sbjct: 145 PTDVDA 150
>sp|VE7_HPV38|PROTEIN E7|Human papillomavirus 38
Query: 2 PTDVEAGFV 10
P D+EA V
Sbjct: 32 PEDIEASVV 40
>sp|PHOSP_ABLVH|PHOSPHOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 1 NPTDVE 6
NP DVE
Sbjct: 69 NPQDVE 74
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 PTDVEAGFV 10
P D EAG V
Sbjct: 2385 PDDSEAGSV 2393
>sp|RIR2_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain HG52)
Query: 4 DVEAGFV 10
D+E GF+
Sbjct: 253 DIEIGFI 259
>sp|RIR2_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain 333)
Query: 4 DVEAGFV 10
D+E GF+
Sbjct: 253 DIEIGFI 259
76|SequenceR|385|376|TEGFDNPTDV
>sp|VPU_HV1AN|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 1 TEGFDNP 7
+ GFDNP
Sbjct: 75 SHGFDNP 81
>sp|VU4_HHV7J|PROTEIN U4|Human herpesvirus 7 (strain JI)
Query: 2 EGFDNP 7
EGF NP
Sbjct: 440 EGFTNP 445
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 TEGFDNP 7
++G DNP
Sbjct: 435 SQGLDNP 441
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 4 FDNPTDV 10
FD P DV
Sbjct: 1388 FDKPLDV 1394
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 4 FDNPTDV 10
FD P DV
Sbjct: 1388 FDKPLDV 1394
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 4 FDNPTDV 10
FD P DV
Sbjct: 1388 FDKPLDV 1394
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 4 FDNPTDV 10
FD P DV
Sbjct: 1388 FDKPLDV 1394
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 4 FDNPTDV 10
FD P DV
Sbjct: 1388 FDKPLDV 1394
>sp|US15_HCMVM|MEMBRANE protein US15|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 EGFDNPTD 9
+GF PTD
Sbjct: 5 KGFQVPTD 12
>sp|US15_HCMVA|UNCHARACTERIZED protein HVLF3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 EGFDNPTD 9
+GF PTD
Sbjct: 5 KGFQVPTD 12
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 1 TEGFDNPTD 9
T F NP D
Sbjct: 559 TSTFQNPQD 567
>sp|UL140_HCMVM|PROTEIN UL140|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 GFDNP 7
GFDNP
Sbjct: 109 GFDNP 113
77|SequenceR|390|381|ALFTPTEGFD
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 2 LFTPTEGFD 10
FTP GFD
Sbjct: 2085 FFTPENGFD 2093
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 3 FTPTEGFD 10
FTP GFD
Sbjct: 2088 FTPENGFD 2095
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 3 FTPTEGFD 10
FTP GFD
Sbjct: 2088 FTPENGFD 2095
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 3 FTPTEGFD 10
FTP GFD
Sbjct: 2088 FTPENGFD 2095
>sp|BEL1_SFV3L|PROTEIN Bel-1|Simian foamy virus type 3
Query: 3 FTPTEGFD 10
F PTEG D
Sbjct: 33 FEPTEGPD 40
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 1 ALFTPTEGFD 10
AL+ EGFD
Sbjct: 1014 ALYAIQEGFD 1023
>sp|PG108_MONPV|ENVELOPE protein OPG108|Monkeypox virus (MPXV)
Query: 1 ALFTPTEGFD 10
A+FT T G+D
Sbjct: 173 AIFTYTGGYD 182
>sp|VP4_ROTHO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 LFTPTEG 8
+ TPTEG
Sbjct: 623 MITPTEG 629
>sp|PB1F2_I77A4|PROTEIN PB1-F2|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 ALFTPTEGF 9
+L PT+GF
Sbjct: 63 SLKNPTQGF 71
>sp|PB1F2_I76A6|PROTEIN PB1-F2|Influenza A virus (strain A/Memphis/110/1976
Query: 1 ALFTPTEGF 9
+L PT+GF
Sbjct: 63 SLKNPTQGF 71
>sp|PB1F2_I75A0|PROTEIN PB1-F2|Influenza A virus (strain A/Beijing/39/1975
Query: 1 ALFTPTEGF 9
+L PT+GF
Sbjct: 63 SLKNPTQGF 71
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 2 LFTPTEGFD 10
LFT E FD
Sbjct: 2020 LFTGHESFD 2028
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 ALFTPTEGF 9
ALFT GF
Sbjct: 2351 ALFTLARGF 2359
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 ALFTPTEGF 9
ALFT GF
Sbjct: 2348 ALFTLARGF 2356
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 ALFTPTEGF 9
ALFT GF
Sbjct: 2351 ALFTLARGF 2359
>sp|CAPSH_ADE08|HEXON protein|Human adenovirus D serotype 8
Query: 5 PTEGFD 10
PTE FD
Sbjct: 175 PTENFD 180
>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)
Query: 2 LFTPTEGF 9
LF+P E F
Sbjct: 235 LFSPGEAF 242
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 1 ALFTPTEGFD 10
ALF EG D
Sbjct: 68 ALFNVQEGVD 77
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 2 LFTPTEGFD 10
L PTEG +
Sbjct: 644 LTVPTEGLE 652
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 2 LFTPTEGFD 10
L PTEG +
Sbjct: 644 LTVPTEGLE 652
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 2 LFTPTEGFD 10
L PTEG +
Sbjct: 644 LTVPTEGLE 652
>sp|RJ1_HHV6U|PROTEIN RJ1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 FTPTEGFD 10
F+P GFD
Sbjct: 100 FSPPGGFD 107
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 LFTPTEGFD 10
L PTEG +
Sbjct: 644 LTVPTEGLE 652
>sp|PG108_VAR67|ENVELOPE protein H3|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 LFTPTEGFD 10
+FT T G+D
Sbjct: 175 IFTYTGGYD 183
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 3 FTPTEGFD 10
F+P GFD
Sbjct: 1920 FSPELGFD 1927
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 3 FTPTEGFD 10
F PT+G D
Sbjct: 365 FEPTDGPD 372
78|SequenceR|395|386|RGIKSALFTP
>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P
Query: 1 RGIKSAL 7
RG+KSA+
Sbjct: 205 RGVKSAI 211
>sp|E311_ADE06|EARLY E3A 11.6 kDa glycoprotein|Human adenovirus C serotype 6
Query: 2 GIKSALFTP 10
G+KSAL P
Sbjct: 19 GLKSALNLP 27
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 2 GIKSALFTP 10
GIK A TP
Sbjct: 638 GIKEADITP 646
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 2 GIKSALFTP 10
GIK A TP
Sbjct: 638 GIKEADITP 646
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 2 GIKSALFTP 10
GIK A TP
Sbjct: 638 GIKEADITP 646
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 2 GIKSALFTP 10
GIK A TP
Sbjct: 638 GIKEADITP 646
79|SequenceR|400|391|KRTVLRGIKS
>sp|NS1_INCYA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Yamagata/10/1981)
Query: 3 TVLRGIKS 10
T+LR IKS
Sbjct: 204 TILRSIKS 211
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 RTVLRGIK 9
RTV RG+K
Sbjct: 767 RTVDRGVK 774
>sp|VP2_ROTYO|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 KRTVLRGI 8
KR++ RGI
Sbjct: 536 KRSIQRGI 543
>sp|VP2_ROTHW|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 KRTVLRGI 8
KR++ RGI
Sbjct: 536 KRSIQRGI 543
>sp|VP2_ROTHT|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 KRTVLRGI 8
KR++ RGI
Sbjct: 536 KRSIQRGI 543
>sp|VP2_ROTHS|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 KRTVLRGI 8
KR++ RGI
Sbjct: 525 KRSIQRGI 532
>sp|VP2_ROTHP|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 KRTVLRGI 8
KR++ RGI
Sbjct: 542 KRSIQRGI 549
>sp|VP2_ROTHL|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 KRTVLRGI 8
KR++ RGI
Sbjct: 525 KRSIQRGI 532
>sp|VP2_ROTHD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 KRTVLRGI 8
KR++ RGI
Sbjct: 525 KRSIQRGI 532
>sp|VP2_ROTH7|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 1 KRTVLRGI 8
KR++ RGI
Sbjct: 526 KRSIQRGI 533
>sp|VP2_ROTH6|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 KRTVLRGI 8
KR++ RGI
Sbjct: 526 KRSIQRGI 533
>sp|VP2_ROT41|INNER capsid protein VP2|Rotavirus A (isolate
Query: 1 KRTVLRGI 8
KR++ RGI
Sbjct: 526 KRSIQRGI 533
>sp|VP2_ROTWI|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 1 KRTVLRGI 8
KR++ RGI
Sbjct: 536 KRSIQRGI 543
>sp|VP2_ROTAD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 KRTVLRGI 8
KR++ RGI
Sbjct: 536 KRSIQRGI 543
>sp|VP2_ROTHK|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 KRTVLRGI 8
KR++ RGI
Sbjct: 538 KRSIQRGI 545
>sp|VP2_ROTH3|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 KRTVLRGI 8
KR++ RGI
Sbjct: 533 KRSIQRGI 540
80|SequenceR|405|396|LTLIAKRTVL
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LTLIAKRTV 9
L LIA RTV
Sbjct: 760 LVLIAARTV 768
>sp|DUT_EBVG|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain
Query: 1 LTLIAKRTVL 10
LTL+ K T+L
Sbjct: 26 LTLVNKTTIL 35
>sp|DUT_EBVB9|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain
Query: 1 LTLIAKRTVL 10
LTL+ K T+L
Sbjct: 26 LTLVNKTTIL 35
>sp|DUT_EBVA8|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain
Query: 1 LTLIAKRTVL 10
LTL+ K T+L
Sbjct: 26 LTLVNKTTIL 35
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LTLIAKRTV 9
L LIA RTV
Sbjct: 762 LILIAARTV 770
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LTLIAKRTV 9
L LIA RTV
Sbjct: 761 LLLIAARTV 769
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LTLIAKRTV 9
L LIA RTV
Sbjct: 773 LLLIAARTV 781
>sp|VP30_EBORR|TRANSCRIPTIONAL activator VP30|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 LTLIAKRT 8
L LIA+RT
Sbjct: 101 LLLIARRT 108
>sp|VP30_EBORE|TRANSCRIPTIONAL activator VP30|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 LTLIAKRT 8
L LIA+RT
Sbjct: 101 LLLIARRT 108
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 TLIAKRTV 9
TL+A RT+
Sbjct: 1058 TLLASRTI 1065
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 TLIAKRTV 9
TL+A RT+
Sbjct: 1058 TLLASRTI 1065
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 TLIAKRTV 9
TL+A RT+
Sbjct: 1058 TLLASRTI 1065
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 TLIAKRTV 9
TL+A RT+
Sbjct: 1058 TLLASRTI 1065
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 TLIAKRTV 9
TL+A RT+
Sbjct: 1058 TLLASRTI 1065
81|SequenceR|410|401|GVTRLLTLIA
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 1 GVTRLLTL 8
G TRLLT+
Sbjct: 37 GSTRLLTI 44
>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 1 GVTRLLT 7
GVT LLT
Sbjct: 488 GVTNLLT 494
82|SequenceR|415|406|FCYEAGVTRL
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 3 YEAGVTRL 10
Y AG TRL
Sbjct: 34 YHAGSTRL 41
>sp|CAPSD_HEVHY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 3 YEAGVTR 9
+EAG TR
Sbjct: 548 WEAGTTR 554
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 1 FCYEAGVT 8
FC E G+T
Sbjct: 717 FCEELGLT 724
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 CYEAGVT 8
CY+AG +
Sbjct: 1528 CYDAGCS 1534
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 3 YEAGVT 8
YEAG+T
Sbjct: 128 YEAGLT 133
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 CYEAGVT 8
CY+AG +
Sbjct: 1526 CYDAGCS 1532
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 CYEAGVT 8
CY+AG +
Sbjct: 1526 CYDAGCS 1532
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 3 YEAGVTRL 10
YEA +TR+
Sbjct: 421 YEAELTRM 428
>sp|VL1_HPV1|MAJOR capsid protein L1|Human papillomavirus type 1 (Human
Query: 1 FCYEAGVTR 9
F Y++G+T+
Sbjct: 475 FLYQSGMTQ 483
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 CYEAG 6
CY+AG
Sbjct: 1524 CYDAG 1528
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 CYEAG 6
CY+AG
Sbjct: 1524 CYDAG 1528
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 CYEAG 6
CY+AG
Sbjct: 1520 CYDAG 1524
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 CYEAG 6
CY+AG
Sbjct: 1524 CYDAG 1528
>sp|UL120_HCMVA|UNCHARACTERIZED protein UL120|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 YEAGVTRL 10
Y AGVT L
Sbjct: 2 YRAGVTLL 9
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 CYEAG 6
CY+AG
Sbjct: 1525 CYDAG 1529
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 CYEAG 6
CY+AG
Sbjct: 1524 CYDAG 1528
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 CYEAG 6
CY+AG
Sbjct: 1524 CYDAG 1528
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 CYEAG 6
CY+AG
Sbjct: 1521 CYDAG 1525
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 CYEAG 6
CY+AG
Sbjct: 1524 CYDAG 1528
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 2 CYEAGV 7
CY AGV
Sbjct: 320 CYPAGV 325
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 CYEAG 6
CY+AG
Sbjct: 1520 CYDAG 1524
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 1 FCYEAGVT 8
FC E G+T
Sbjct: 717 FCEEFGLT 724
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 CYEAG 6
CY+AG
Sbjct: 1521 CYDAG 1525
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 CYEAG 6
CY+AG
Sbjct: 1520 CYDAG 1524
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CYEAG 6
CY+AG
Sbjct: 1520 CYDAG 1524
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CYEAG 6
CY+AG
Sbjct: 1520 CYDAG 1524
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CYEAG 6
CY+AG
Sbjct: 1520 CYDAG 1524
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CYEAG 6
CY+AG
Sbjct: 1520 CYDAG 1524
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CYEAG 6
CY+AG
Sbjct: 1520 CYDAG 1524
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CYEAG 6
CY+AG
Sbjct: 1520 CYDAG 1524
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CYEAG 6
CY+AG
Sbjct: 1520 CYDAG 1524
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 CYEAG 6
CY+AG
Sbjct: 1520 CYDAG 1524
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 CYEAG 6
CY+AG
Sbjct: 1520 CYDAG 1524
>sp|UL120_HCMVM|MEMBRANE protein UL120|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 YEAGVTRL 10
Y AGVT L
Sbjct: 2 YRAGVTLL 9
>sp|NCAP_CCHFV|NUCLEOPROTEIN hemorrhagic fever virus (isolate
Query: 3 YEAGVT 8
Y+AGVT
Sbjct: 315 YKAGVT 320
>sp|NCAP_CCHFI|NUCLEOPROTEIN hemorrhagic fever virus (strain
Query: 3 YEAGVT 8
Y+AGVT
Sbjct: 315 YKAGVT 320
83|SequenceR|420|411|GHIPPFCYEA
>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37
Query: 2 HIPPFC 7
H+PP C
Sbjct: 229 HMPPMC 234
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 3 IPPFCY 8
+ PFCY
Sbjct: 248 VSPFCY 253
>sp|HEMA_CVHOC|HEMAGGLUTININ-ESTERASE coronavirus OC43 (HCoV-OC43)
Query: 4 PPFCY 8
PP+CY
Sbjct: 309 PPYCY 313
>sp|UL95_HHV6Z|PROTEIN U67|Human herpesvirus 6B (strain Z29)
Query: 3 IPPFCYE 9
+PP+ YE
Sbjct: 205 LPPYLYE 211
>sp|UL95_HHV6U|PROTEIN U67|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 IPPFCYE 9
+PP+ YE
Sbjct: 205 LPPYLYE 211
>sp|UL95_HHV6H|PROTEIN U67|Human herpesvirus 6B (HHV-6 variant
Query: 3 IPPFCYE 9
+PP+ YE
Sbjct: 205 LPPYLYE 211
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 3 IPPFC 7
+PPFC
Sbjct: 618 LPPFC 622
>sp|DUT_VARV|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Variola virus
Query: 3 IPPFCY 8
+P FCY
Sbjct: 58 MPKFCY 63
>sp|DUT_VAR67|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Variola virus (isolate
Query: 3 IPPFCY 8
+P FCY
Sbjct: 58 MPKFCY 63
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 3 IPPFC 7
+PPFC
Sbjct: 754 LPPFC 758
>sp|DUT_CWPXG|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Cowpox virus (strain GRI-90 /
Query: 3 IPPFCY 8
+P FCY
Sbjct: 58 MPKFCY 63
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 3 IPPFC 7
+PPFC
Sbjct: 754 LPPFC 758
>sp|DUT_MONPV|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Monkeypox virus (MPXV)
Query: 3 IPPFCY 8
+P FCY
Sbjct: 62 MPKFCY 67
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 3 IPPFC 7
+PPFC
Sbjct: 749 LPPFC 753
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 3 IPPFC 7
+PPFC
Sbjct: 678 LPPFC 682
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 3 IPPFC 7
+PPFC
Sbjct: 1633 VPPFC 1637
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 4 PPFCYEA 10
P FC+EA
Sbjct: 458 PFFCFEA 464
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 3 IPPFC 7
+PPFC
Sbjct: 1633 VPPFC 1637
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 3 IPPFC 7
+PPFC
Sbjct: 1633 VPPFC 1637
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 3 IPPFC 7
+PPFC
Sbjct: 1633 VPPFC 1637
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 3 IPPFC 7
+PPFC
Sbjct: 1633 VPPFC 1637
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 3 IPPFC 7
+PPFC
Sbjct: 1633 VPPFC 1637
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 3 IPPFC 7
+PPFC
Sbjct: 1633 VPPFC 1637
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 3 IPPFC 7
+PPFC
Sbjct: 1633 VPPFC 1637
>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15
Query: 2 HIPPFC 7
IPP C
Sbjct: 222 QIPPMC 227
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 3 IPPFC 7
+PPFC
Sbjct: 1633 VPPFC 1637
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 HIPPFCYE 9
HI +CY+
Sbjct: 2812 HIATWCYD 2819
>sp|ORF2_VZVO|MEMBRANE protein 2|Varicella-zoster virus (strain Oka vaccine)
Query: 1 GHIPPF 6
GH+P F
Sbjct: 11 GHVPAF 16
>sp|ORF2_VZVD|MEMBRANE protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 GHIPPF 6
GH+P F
Sbjct: 11 GHVPAF 16
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 6 FCYEA 10
+CYEA
Sbjct: 349 YCYEA 353
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 6 FCYEA 10
+CYEA
Sbjct: 349 YCYEA 353
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 6 FCYEA 10
+CYEA
Sbjct: 349 YCYEA 353
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 6 FCYEA 10
+CYEA
Sbjct: 347 YCYEA 351
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 2 HIPPF 6
H PPF
Sbjct: 748 HAPPF 752
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 4 PPFCYE 9
PP CY+
Sbjct: 293 PPICYD 298
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 HIPPFCYE 9
H PF YE
Sbjct: 154 HYTPFHYE 161
>sp|GC_VZVD|ENVELOPE glycoprotein C|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 PPFCYE 9
PPF YE
Sbjct: 180 PPFLYE 185
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 3 IPPFCY 8
+PPF Y
Sbjct: 718 LPPFAY 723
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 2 HIPPFCY 8
+P FCY
Sbjct: 893 QVPGFCY 899
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 2 HIPPFCYE 9
H PF YE
Sbjct: 154 HYTPFHYE 161
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 3 IPPFCYE 9
+ PFC++
Sbjct: 341 LDPFCFD 347
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 4 PPFCYE 9
PP CY+
Sbjct: 294 PPICYD 299
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 4 PPFCYE 9
PP CY+
Sbjct: 294 PPICYD 299
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 4 PPFCYE 9
PP CY+
Sbjct: 294 PPICYD 299
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 4 PPFCYE 9
PP CY+
Sbjct: 293 PPICYD 298
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 4 PPFCYE 9
PP CY+
Sbjct: 294 PPICYD 299
>sp|ORF4_HHV8P|COMPLEMENT control protein|Human herpesvirus 8 type P
Query: 4 PPFC 7
PPFC
Sbjct: 145 PPFC 148
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 IPPFCYE 9
+ PFC++
Sbjct: 341 LDPFCFD 347
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 HIPPFCYEA 10
+IPP +EA
Sbjct: 114 NIPPTTFEA 122
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 1 GHIPPFCY 8
G PP C+
Sbjct: 46 GPQPPLCF 53
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 1 GHIPPFCY 8
G PP C+
Sbjct: 46 GPQPPLCF 53
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 1 GHIPPFCY 8
GH+ P C+
Sbjct: 662 GHVCPECH 669
>sp|TEG6_HHV1E|TEGUMENT protein UL55|Human herpesvirus 1 (strain HFEM)
Query: 4 PPFCYEA 10
PP+C A
Sbjct: 21 PPYCLNA 27
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 1 GHIPP 5
GH PP
Sbjct: 768 GHYPP 772
>sp|TEG6_HHV11|TEGUMENT protein UL55|Human herpesvirus 1 (strain 17)
Query: 4 PPFCYEA 10
PP+C A
Sbjct: 21 PPYCLNA 27
>sp|HEMA_HUTV|HEMAGGLUTININ-ESTERASE torovirus (HuTV)
Query: 4 PPFC 7
PPFC
Sbjct: 306 PPFC 309
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 4 PPFCY 8
PP CY
Sbjct: 278 PPVCY 282
>sp|US03_HHV11|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 1 (strain 17)
Query: 2 HIPPFC 7
HIPP C
Sbjct: 131 HIPPPC 136
>sp|LF2_EBVB9|PROTEIN LF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 HIPPF 6
H PPF
Sbjct: 209 HTPPF 213
>sp|LF2_EBVA8|PROTEIN LF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 HIPPF 6
H PPF
Sbjct: 209 HTPPF 213
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 4 PPFCY 8
PP CY
Sbjct: 286 PPTCY 290
>sp|TEG6_HHV2H|TEGUMENT protein UL55|Human herpesvirus 2 (strain HG52)
Query: 4 PPFCYEA 10
PP+C A
Sbjct: 21 PPYCLNA 27
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 4 PPFCY 8
PP CY
Sbjct: 286 PPTCY 290
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 4 PPFCY 8
PP CY
Sbjct: 286 PPTCY 290
84|SequenceR|425|416|QEAPVGHIPP
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 EAPVGHIPP 10
+AP+G IPP
Sbjct: 1836 QAPLGLIPP 1844
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 QEAPVGHI 8
+E P+GH+
Sbjct: 53 KEQPIGHV 60
>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 QEAPVGHIPP 10
+ APV IPP
Sbjct: 604 ETAPVPTIPP 613
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 1 QEAPVGHIPP 10
+ APV IPP
Sbjct: 603 ETAPVPTIPP 612
>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann
Query: 1 QEAPVGHIPP 10
+ APV IPP
Sbjct: 604 ETAPVPTIPP 613
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 1 QEAPVGHIPP 10
+ APV IPP
Sbjct: 591 ETAPVPTIPP 600
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 1 QEAPVGHIPP 10
+ APV IPP
Sbjct: 591 ETAPVPTIPP 600
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 1 QEAPVGHIPP 10
+ APV IPP
Sbjct: 597 ETAPVPTIPP 606
>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great
Query: 1 QEAPVGHIPP 10
+ APV IPP
Sbjct: 591 ETAPVPTIPP 600
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 1 QEAPVGHIPP 10
+ APV IPP
Sbjct: 591 ETAPVPTIPP 600
>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)
Query: 1 QEAPVGHIPP 10
+ APV IPP
Sbjct: 591 ETAPVPTIPP 600
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 1 QEAPVGHIPP 10
+ APV IPP
Sbjct: 597 ETAPVPTIPP 606
>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 1 QEAPVGHIPP 10
+ APV IPP
Sbjct: 591 ETAPVPTIPP 600
>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 1 QEAPVGHIPP 10
+ APV IPP
Sbjct: 591 ETAPVPTIPP 600
>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)
Query: 1 QEAPVGHIPP 10
+ APV IPP
Sbjct: 590 ETAPVPTIPP 599
>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)
Query: 1 QEAPVGHIPP 10
+ APV IPP
Sbjct: 590 ETAPVPTIPP 599
>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 1 QEAPVGHIPP 10
+ APV IPP
Sbjct: 590 ETAPVPTIPP 599
>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)
Query: 1 QEAPVGHIPP 10
+ APV IPP
Sbjct: 590 ETAPVPTIPP 599
>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)
Query: 2 EAPVGHI 8
E P+GH+
Sbjct: 395 EIPIGHL 401
>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain
Query: 2 EAPVGHI 8
E P+GH+
Sbjct: 404 EIPIGHL 410
>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)
Query: 2 EAPVGHI 8
E P+GH+
Sbjct: 404 EIPIGHL 410
>sp|GAG_HV1YB|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 APVGHIPP 10
APVG +PP
Sbjct: 220 APVGPLPP 227
>sp|VE6_HPV17|PROTEIN E6|Human papillomavirus 17
Query: 1 QEAPVGHIP 9
+ P+G IP
Sbjct: 90 EHKPIGEIP 98
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 APVGHIPP 10
APVG +PP
Sbjct: 220 APVGPLPP 227
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 1 QEAPVGHIPP 10
Q+ P G PP
Sbjct: 207 QDIPQGSCPP 216
>sp|YLR3_EBVP3|UNCHARACTERIZED protein BLRF3|Epstein-Barr virus (strain P3HR-1) (HHV-4)
Query: 3 APVGHIPP 10
AP H+PP
Sbjct: 74 APAQHVPP 81
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 QEAPVGHIPP 10
QEA V +PP
Sbjct: 1233 QEAQVYSLPP 1242
>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 APVGHIPP 10
AP H+PP
Sbjct: 74 APAQHVPP 81
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 4 PVGHIPP 10
PVG PP
Sbjct: 2408 PVGSAPP 2414
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 2 EAPVGHIPP 10
E P G +PP
Sbjct: 557 ELPGGEVPP 565
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 3 APVGHI 8
AP+GH+
Sbjct: 507 APLGHV 512
>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 APVGHIPP 10
+PVG PP
Sbjct: 1062 SPVGQTPP 1069
>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 APVGHIPP 10
+PVG PP
Sbjct: 1066 SPVGQTPP 1073
85|SequenceR|430|421|PAASGQEAPV
>sp|ORF50_HHV8P|REPLICATION and transcription activator|Human herpesvirus 8 type P
Query: 1 PAASGQEAP 9
P ASG+E P
Sbjct: 481 PEASGEELP 489
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 PAASGQEAPV 10
P AS EAP+
Sbjct: 144 PTASSSEAPL 153
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 PAASGQEAPV 10
P AS EAP+
Sbjct: 147 PTASTSEAPL 156
>sp|VL1_HPV24|MAJOR capsid protein L1|Human papillomavirus 24
Query: 1 PAASGQ 6
PAA+GQ
Sbjct: 290 PAATGQ 295
86|SequenceR|435|426|SFPHHPAASG
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 FPHHPAASG 10
PH P+ASG
Sbjct: 444 LPHDPSASG 452
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 FPHHPAASG 10
PH P+ASG
Sbjct: 444 LPHDPSASG 452
>sp|HEMA_I02A7|HEMAGGLUTININ A virus (strain A/Teal/China/2978.1/2002
Query: 1 SFPHHPAASG 10
S+P+H A+SG
Sbjct: 133 SWPNHEASSG 142
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 PHHPAAS 9
PHHP+ S
Sbjct: 1792 PHHPSPS 1798
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 1 SFPHHPAASG 10
S P+HP +SG
Sbjct: 959 STPYHPQSSG 968
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 FPHHPAAS 9
FPH P +S
Sbjct: 2144 FPHDPVSS 2151
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 1 SFPHHPAASG 10
S P+HP +SG
Sbjct: 959 STPYHPQSSG 968
>sp|PG195_MONPV|PROTEIN OPG195|Monkeypox virus (MPXV)
Query: 4 HHPAASG 10
H P ASG
Sbjct: 53 HRPTASG 59
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 SFPHHP 6
S P+HP
Sbjct: 4656 SMPYHP 4661
>sp|X_PAVHV|UNCHARACTERIZED protein X|Human parvovirus B19 (strain HV)
Query: 3 PHHPAA 8
P+HP A
Sbjct: 10 PYHPVA 15
>sp|PG112_MONPV|LATE protein OPG112|Monkeypox virus (MPXV)
Query: 2 FPHHP 6
F HHP
Sbjct: 32 FKHHP 36
>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 SFPHHPAASG 10
S+P+H A+ G
Sbjct: 137 SWPNHEASLG 146
>sp|UL40_HCMVM|PROTEIN UL40|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SFPHHPA 7
+F HHPA
Sbjct: 94 AFSHHPA 100
>sp|V30K_HCMVE|30 kDa major early protein|Human cytomegalovirus (strain Eisenhardt)
Query: 1 SFPHHPAA 8
S P+ PAA
Sbjct: 223 SLPYEPAA 230
>sp|CXCL1_HCMVM|CHEMOKINE vCXCL1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PHHP 6
PHHP
Sbjct: 79 PHHP 82
>sp|UL40_HCMVA|PROTEIN UL40|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SFPHHPA 7
+F HHPA
Sbjct: 94 AFSHHPA 100
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SFPHHP 6
+F HHP
Sbjct: 564 AFSHHP 569
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SFPHHP 6
+F HHP
Sbjct: 564 AFSHHP 569
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 SFPHHPAAS 9
SFP PA++
Sbjct: 2354 SFPTQPAST 2362
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 2 FPHHPA 7
+PHHP
Sbjct: 738 YPHHPV 743
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 4 HHPAASG 10
HH ASG
Sbjct: 2046 HHDVASG 2052
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 4 HHPAASG 10
HH ASG
Sbjct: 2046 HHDVASG 2052
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 2 FPHHPA 7
+PHHP
Sbjct: 735 YPHHPV 740
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 4 HHPAASG 10
HH ASG
Sbjct: 2046 HHDVASG 2052
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 1 SFPHHPAAS 9
SF HH A +
Sbjct: 65 SFDHHAAPT 73
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 SFPHHPAAS 9
+FPH+P +
Sbjct: 846 AFPHNPECT 854
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PHHP 6
PHHP
Sbjct: 532 PHHP 535
>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky
Query: 1 SFPHHPAASG 10
S+ +H A+SG
Sbjct: 137 SWSNHEASSG 146
>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 SFPHHPAASG 10
S+ +H A+SG
Sbjct: 137 SWSNHEASSG 146
>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 SFPHHPAASG 10
S+ +H A+SG
Sbjct: 137 SWSNHEASSG 146
>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea
Query: 1 SFPHHPAASG 10
S+ +H A+SG
Sbjct: 135 SWSNHEASSG 144
>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 SFPHHPAASG 10
S+ +H A+SG
Sbjct: 126 SWSNHEASSG 135
>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 SFPHHPAASG 10
S+ +H A+SG
Sbjct: 126 SWSNHEASSG 135
>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 SFPHHPAASG 10
S+ +H A+SG
Sbjct: 126 SWSNHEASSG 135
>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky
Query: 1 SFPHHPAASG 10
S+ +H A+SG
Sbjct: 126 SWSNHEASSG 135
>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 1 SFPHHPAASG 10
S+ +H A+SG
Sbjct: 137 SWSNHEASSG 146
>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 SFPHHPAASG 10
S+ +H A+SG
Sbjct: 137 SWSNHDASSG 146
>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 SFPHHPAASG 10
S+ +H A+SG
Sbjct: 137 SWSNHDASSG 146
>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996
Query: 1 SFPHHPAASG 10
S+ +H A+SG
Sbjct: 137 SWSNHDASSG 146
>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959
Query: 1 SFPHHPAASG 10
S+ +H A+SG
Sbjct: 137 SWSNHDASSG 146
87|SequenceR|440|431|QARELSFPHH
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 QARELSFP 8
+AREL FP
Sbjct: 1477 KARELDFP 1484
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 QARELSFP 8
++REL FP
Sbjct: 1477 KSRELDFP 1484
>sp|VP2_ROTJ1|INNER capsid protein VP2|Rotavirus X (strain
Query: 3 RELSFPHH 10
+ L+FP+H
Sbjct: 933 QRLNFPYH 940
>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate
Query: 3 RELSFPHH 10
+ L+FP+H
Sbjct: 933 QRLNFPYH 940
>sp|NS1_I78A8|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/18/1978
Query: 5 LSFPHH 10
LSFP H
Sbjct: 164 LSFPGH 169
>sp|NS1_I78A7|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/2/1978
Query: 5 LSFPHH 10
LSFP H
Sbjct: 164 LSFPGH 169
>sp|NS1_I77A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Alaska/6/1977
Query: 5 LSFPHH 10
LSFP H
Sbjct: 164 LSFPGH 169
>sp|VE2_HPV16|REGULATORY protein E2|Human papillomavirus type 16
Query: 1 QARELSFPH 9
+ARE+ F H
Sbjct: 45 KAREMGFKH 53
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 ELSFPH 9
++SFPH
Sbjct: 922 KVSFPH 927
>sp|CVC1_HCMVA|CAPSID vertex component 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QARELSFPHH 10
++RELS+ H
Sbjct: 337 RSRELSYDDH 346
>sp|CVC1_HCMVM|CAPSID vertex component 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QARELSFPHH 10
++RELS+ H
Sbjct: 337 RSRELSYDDH 346
88|SequenceR|445|436|SIPPPQAREL
>sp|NS1_I30A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 1 SIPPPQAREL 10
S+PP Q RE+
Sbjct: 213 SLPPKQKREV 222
>sp|NS1_I02A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Silky
Query: 1 SIPPPQAREL 10
S+PP Q R++
Sbjct: 213 SLPPKQKRKM 222
>sp|UL20_VZVD|PROTEIN UL20 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 PPQAR 8
PPQAR
Sbjct: 3 PPQAR 7
>sp|NS1_I02A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 SIPPPQAREL 10
S+PP Q R++
Sbjct: 213 SLPPKQKRKM 222
>sp|NS1_I02A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 SIPPPQAREL 10
S+PP Q R++
Sbjct: 213 SLPPKQKRKM 222
>sp|NS1_I02A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Guinea
Query: 1 SIPPPQAREL 10
S+PP Q R++
Sbjct: 213 SLPPKQKRKM 222
>sp|VE2_HPV39|REGULATORY protein E2|Human papillomavirus 39
Query: 1 SIPPPQAR 8
+IPPP +
Sbjct: 240 TIPPPSRK 247
>sp|RIR2_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 8 type P
Query: 3 PPPQA 7
PPP+A
Sbjct: 271 PPPEA 275
>sp|NS1_I77A9|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Equine/New
Query: 1 SIPPPQAREL 10
S PP Q R++
Sbjct: 213 SFPPKQKRKM 222
>sp|NS1_I73A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Equine/London/1416/1973
Query: 1 SIPPPQAREL 10
S PP Q R++
Sbjct: 213 SFPPKQKRKM 222
>sp|TEG7_HCMVM|TEGUMENT protein UL51 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SIPPPQ------AREL 10
+IPPPQ AREL
Sbjct: 329 TIPPPQIPFVGSAREL 344
>sp|TEG7_HCMVA|TEGUMENT protein UL51 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SIPPPQ------AREL 10
+IPPPQ AREL
Sbjct: 329 TIPPPQIPFVGSAREL 344
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 SIPPPQAREL 10
S+ PP +RE+
Sbjct: 237 SVFPPFSREM 246
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 SIPPPQAREL 10
S+ PP +RE+
Sbjct: 238 SVFPPFSREM 247
>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82
Query: 4 PPQARE 9
PPQA+E
Sbjct: 434 PPQAKE 439
>sp|U24_HHV6U|U24 protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 IPPPQAR 8
IPPPQ+R
Sbjct: 38 IPPPQSR 44
>sp|UL138_HCMVM|PROTEIN UL138|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SIPPP 5
S+PPP
Sbjct: 128 SVPPP 132
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 IPPPQAR 8
IPP QAR
Sbjct: 865 IPPLQAR 871
>sp|NS1_I96A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 1 SIPPPQAREL 10
S+PP Q R +
Sbjct: 213 SLPPKQKRYM 222
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 SIPPPQ 6
++PPP+
Sbjct: 1467 TVPPPE 1472
>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)
Query: 4 PPQARE 9
PPQAR+
Sbjct: 116 PPQARQ 121
>sp|PHOSP_MUMPZ|PHOSPHOPROTEIN virus genotype N (strain
Query: 1 SIPPPQA 7
++PPP+A
Sbjct: 80 TVPPPEA 86
>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)
Query: 4 PPQARE 9
PPQAR+
Sbjct: 116 PPQARQ 121
>sp|CEP2_HHV8P|CYTOPLASMIC envelopment protein 2|Human herpesvirus 8 type P
Query: 2 IPPPQARE 9
I PP +RE
Sbjct: 120 IAPPPSRE 127
89|SequenceR|450|441|ELNNLSIPPP
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ELNNLSIPPP 10
EL+N +PPP
Sbjct: 818 ELSNEVLPPP 827
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ELNNLSIPPP 10
EL+N +PPP
Sbjct: 818 ELSNEVLPPP 827
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ELNNLSIPPP 10
EL+N +PPP
Sbjct: 818 ELSNEVLPPP 827
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ELNNLSIPPP 10
EL+N +PPP
Sbjct: 818 ELSNEVLPPP 827
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ELNNLSIPPP 10
EL+N +PPP
Sbjct: 818 ELSNEVLPPP 827
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ELNNLSIPPP 10
EL+N +PPP
Sbjct: 818 ELSNEVLPPP 827
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ELNNLSIPPP 10
EL+N +PPP
Sbjct: 818 ELSNEVLPPP 827
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ELNNLSIPPP 10
EL+N +PPP
Sbjct: 818 ELSNEVLPPP 827
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ELNNLSIPPP 10
EL+N +PPP
Sbjct: 818 ELSNEVLPPP 827
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ELNNLSIPPP 10
EL+N +PPP
Sbjct: 812 ELSNEVLPPP 821
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ELNNLSIPPP 10
EL+N +PPP
Sbjct: 818 ELSNEVLPPP 827
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 2 LNNLSIPPP 10
LNN+S+P P
Sbjct: 333 LNNVSVPSP 341
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ELNNLSIPPP 10
EL+N +PPP
Sbjct: 797 ELSNEVLPPP 806
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 2 LNNLSIPPP 10
LNN+S+P P
Sbjct: 333 LNNVSVPSP 341
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 2 LNNLSIPPP 10
LNN ++P P
Sbjct: 333 LNNFNVPSP 341
>sp|UL09_HCMVA|UNCHARACTERIZED protein UL9|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ELNNLSIPP 9
E NLS+PP
Sbjct: 38 EGQNLSLPP 46
>sp|POLG_HAVLC|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ELNNLSIPPP 10
EL+N +PPP
Sbjct: 322 ELSNEVLPPP 331
>sp|VE2_HPV11|REGULATORY protein E2|Human papillomavirus 11
Query: 2 LNNLSIPP 9
LN++ IPP
Sbjct: 346 LNSVKIPP 353
>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P
Query: 3 NNLSIPPP 10
NN+ PPP
Sbjct: 381 NNVISPPP 388
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 LNNLSIPP 9
L LSIPP
Sbjct: 53 LRVLSIPP 60
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 LNNLSIPP 9
L LSIPP
Sbjct: 53 LRVLSIPP 60
>sp|VB18_VACCC|ANKYRIN repeat protein B18|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 ELNNLSIPP 9
+L N+S PP
Sbjct: 563 DLYNISYPP 571
>sp|VB18_VARV|ANKYRIN repeat protein B18|Variola virus
Query: 1 ELNNLSIPP 9
+L N+S PP
Sbjct: 563 DLYNISYPP 571
>sp|VB18_VAR67|ANKYRIN repeat protein B18|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 ELNNLSIPP 9
+L N+S PP
Sbjct: 563 DLYNISYPP 571
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 LNNLSIPP 9
L LSIPP
Sbjct: 53 LRVLSIPP 60
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 LNNLSIPP 9
L LSIPP
Sbjct: 53 LRVLSIPP 60
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 LNNLSIPP 9
L LSIPP
Sbjct: 53 LRVLSIPP 60
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 2 LNNLSIPPP 10
LN+ S+P P
Sbjct: 341 LNDKSVPSP 349
>sp|VB18_VACCA|ANKYRIN repeat protein B18|Vaccinia virus (strain Ankara) (VACV)
Query: 1 ELNNLSIPP 9
+L N+S PP
Sbjct: 563 DLYNISYPP 571
>sp|VP30_MABVR|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Ravn-87)
Query: 4 NLSIPPP 10
NLS PPP
Sbjct: 66 NLSKPPP 72
>sp|VP30_MABVP|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Popp-67)
Query: 4 NLSIPPP 10
NLS PPP
Sbjct: 66 NLSKPPP 72
>sp|VP30_MABVM|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Musoke-80)
Query: 4 NLSIPPP 10
NLS PPP
Sbjct: 66 NLSKPPP 72
>sp|VP30_MABVA|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Angola/2005)
Query: 4 NLSIPPP 10
NLS PPP
Sbjct: 66 NLSKPPP 72
>sp|VP30_MABVO|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 4 NLSIPPP 10
NLS PPP
Sbjct: 66 NLSKPPP 72
>sp|VP3_ROTB2|PROTEIN VP3|Rotavirus X (isolate
Query: 1 ELNNLS 6
ELNNLS
Sbjct: 524 ELNNLS 529
90|SequenceR|455|446|MLDQLELNNL
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 1 MLDQLE 6
M+DQLE
Sbjct: 959 MIDQLE 964
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 1 MLDQLE 6
M+DQLE
Sbjct: 959 MIDQLE 964
>sp|NSP4_ROTJ1|NON-STRUCTURAL glycoprotein 4|Rotavirus X (strain
Query: 1 MLDQLELNN 9
+LD+ E+NN
Sbjct: 9 VLDEFEVNN 17
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 4 QLELNNL 10
Q+EL+NL
Sbjct: 171 QMELSNL 177
91|SequenceR|460|451|ARSIHMLDQL
>sp|VITF3_VARV|INTERMEDIATE transcription factor 3 large|Variola virus
Query: 4 IHMLDQL 10
IHM+D+L
Sbjct: 232 IHMIDKL 238
>sp|VITF3_VAR67|INTERMEDIATE transcription factor 3 large|Variola virus (isolate
Query: 4 IHMLDQL 10
IHM+D+L
Sbjct: 232 IHMIDKL 238
>sp|VTF3L_VACCT|INTERMEDIATE transcription factor 3 large|Vaccinia virus (strain Tian Tan)
Query: 4 IHMLDQL 10
IHM+D+L
Sbjct: 232 IHMIDKL 238
>sp|VTF3L_VACCA|INTERMEDIATE transcription factor 3 large|Vaccinia virus (strain Ankara) (VACV)
Query: 4 IHMLDQL 10
IHM+D+L
Sbjct: 232 IHMIDKL 238
>sp|VITF3_VACCC|INTERMEDIATE transcription factor 3 large|Vaccinia virus (strain Copenhagen)
Query: 4 IHMLDQL 10
IHM+D+L
Sbjct: 232 IHMIDKL 238
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 1 ARSIHMLDQ 9
A+S+H LD+
Sbjct: 490 AQSLHGLDK 498
92|SequenceR|465|456|FAPKRARSIH
>sp|C8_VACCC|PROTEIN C8|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 PKRARSIH 10
PKRA+SIH
Sbjct: 176 PKRAKSIH 183
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 APKRARSI 9
+P+RARS+
Sbjct: 680 SPRRARSV 687
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 FAPKRARSIH 10
F P RA +H
Sbjct: 1591 FPPGRAHEVH 1600
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 FAPKRARSIH 10
F P RA +H
Sbjct: 1591 FPPGRAHEVH 1600
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 FAPKRARSIH 10
F P RA +H
Sbjct: 1591 FPPGRAHEVH 1600
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 FAPKRARSIH 10
F P RA +H
Sbjct: 1591 FPPGRAHEVH 1600
>sp|RDRP_I68A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 FAPKRARSI 9
+ PKR RSI
Sbjct: 666 WTPKRNRSI 674
>sp|RDRP_I81A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 FAPKRARSI 9
+ PKR RSI
Sbjct: 666 WVPKRNRSI 674
>sp|RDRP_I77AD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 FAPKRARSI 9
+ PKR RSI
Sbjct: 666 WVPKRNRSI 674
>sp|RDRP_I00A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 FAPKRARSI 9
+ PKR RSI
Sbjct: 666 WVPKRNRSI 674
>sp|RDRP_I67A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 FAPKRARSI 9
+ PKR RSI
Sbjct: 666 WTPKRNRSI 674
>sp|RDRP_I67A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 FAPKRARSI 9
+ PKR RSI
Sbjct: 666 WVPKRNRSI 674
>sp|RDRP_I54A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 FAPKRARSI 9
+ PKR RSI
Sbjct: 666 WVPKRNRSI 674
>sp|RDRP_I07A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 FAPKRARSI 9
+ PKR RSI
Sbjct: 666 WVPKRNRSI 674
>sp|RDRP_I01A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 FAPKRARSI 9
+ PKR RSI
Sbjct: 666 WVPKRNRSI 674
>sp|RDRP_I00A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/New
Query: 1 FAPKRARSI 9
+ PKR RSI
Sbjct: 666 WVPKRNRSI 674
>sp|RDRP_I96A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 FAPKRARSI 9
+ PKR RSI
Sbjct: 666 WVPKRNRSI 674
>sp|RDRP_I96A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 FAPKRARSI 9
+ PKR RSI
Sbjct: 666 WVPKRNRSI 674
>sp|RDRP_I88A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 FAPKRARSI 9
+ PKR RSI
Sbjct: 666 WVPKRNRSI 674
>sp|RDRP_I77AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 FAPKRARSI 9
+ PKR RSI
Sbjct: 666 WVPKRNRSI 674
>sp|RDRP_I56A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 FAPKRARSI 9
+ PKR RSI
Sbjct: 666 WVPKRNRSI 674
>sp|RDRP_I51A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 FAPKRARSI 9
+ PKR RSI
Sbjct: 666 WVPKRNRSI 674
>sp|RDRP_I83A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 FAPKRARSI 9
+ PKR RSI
Sbjct: 666 WVPKRNRSI 674
>sp|RDRP_I77AB|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 FAPKRARSI 9
+ PKR RSI
Sbjct: 666 WVPKRNRSI 674
>sp|RDRP_I80AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 FAPKRARSI 9
+ PKR RSI
Sbjct: 666 WVPKRNRSI 674
>sp|RDRP_I02A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I02A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Guinea
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I03A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I02A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I02A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I57A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I57A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I03A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I93A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I88A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I83A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I80A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I57A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I57A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I57A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I05A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I02A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I61A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I01A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I97A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I78A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I000X|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/X-31
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I68A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I97A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I96A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I80A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I79A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I78A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I78A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I76A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I75A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I75A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I73A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Port
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I72A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I72A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I72A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I71A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I70A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I69A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I68A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I60A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Ann
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I59A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I35A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I18A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Brevig
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I06A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I02A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I02A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I85A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I73A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I45A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I34A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Puerto
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I82A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I43A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I40A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I36A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I73A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I33A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|RDRP_I77A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 3 PKRARSI 9
PKR RSI
Sbjct: 668 PKRNRSI 674
>sp|UL24_VZVO|PROTEIN UL24 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 FAPKRARSIH 10
A KRA+S H
Sbjct: 208 LAKKRAKSCH 217
>sp|UL24_VZVD|PROTEIN UL24 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 FAPKRARSIH 10
A KRA+S H
Sbjct: 208 LAKKRAKSCH 217
>sp|RDRP_I82A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 FAPKRARSI 9
+ PKR RSI
Sbjct: 70 WVPKRNRSI 78
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 FAPKRARSIH 10
F P +A +H
Sbjct: 1591 FPPGKAHEVH 1600
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 FAPKRARSIH 10
F P +A +H
Sbjct: 1591 FPPGKAHEVH 1600
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 1 FAPKRARS 8
FAP ARS
Sbjct: 302 FAPSSARS 309
93|SequenceR|470|461|MSGLIFAPKR
>sp|NEF_HV1MA|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 MSGLIFAPKR 10
+ GL+++PKR
Sbjct: 100 LDGLVWSPKR 109
>sp|NCAP_DHVI1|NUCLEOPROTEIN virus (strain Indian/1313/61) (Dho)
Query: 1 MSGLIFAPKR 10
M G++F P++
Sbjct: 327 MFGMVFEPRK 336
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 3 GLIFAPKR 10
G +FAPK+
Sbjct: 530 GKVFAPKQ 537
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 GLIFAPKR 10
G +FAPK+
Sbjct: 530 GKVFAPKQ 537
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 GLIFAPKR 10
G +FAPK+
Sbjct: 531 GKVFAPKQ 538
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 3 GLIFAPKR 10
G +FAPK+
Sbjct: 531 GKVFAPKQ 538
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 3 GLIFAPKR 10
G +FAPK+
Sbjct: 531 GKVFAPKQ 538
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 MSGLIF 6
MSGL+F
Sbjct: 313 MSGLVF 318
>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 MSGLIF 6
MSGL+F
Sbjct: 313 MSGLVF 318
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 MSGLIF 6
MSGL+F
Sbjct: 310 MSGLVF 315
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 MSGLIF 6
MSGL+F
Sbjct: 319 MSGLVF 324
>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human
Query: 3 GLIFAPK 9
GL+F PK
Sbjct: 389 GLMFNPK 395
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 3 GLIFAPK 9
GL+F PK
Sbjct: 385 GLMFNPK 391
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 SGLIFAPK 9
SGL APK
Sbjct: 1069 SGLFSAPK 1076
>sp|E3B14_ADE12|EARLY E3B 12.7 kDa protein|Human adenovirus A serotype 12
Query: 1 MSGLIF 6
MSGL+F
Sbjct: 45 MSGLVF 50
>sp|VU3_HHV6U|PROTEIN U3|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 MSGLIFAPKR 10
++GL+ P+R
Sbjct: 104 LAGLVCCPER 113
94|SequenceR|475|466|RKEDRMSGLI
>sp|UL64_HCMVA|UNCHARACTERIZED protein UL64|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RKEDRMSGLI 10
+KED+ +G+I
Sbjct: 62 KKEDKSNGII 71
>sp|PHOSP_PI1HC|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 1 RKEDRMSGLI 10
RK++ +SG+I
Sbjct: 20 RKQESLSGVI 29
95|SequenceR|480|471|LHDHTRKEDR
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 2 HDHTRKED 9
HDH KED
Sbjct: 390 HDHDIKED 397
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 2 HDHTR 6
HDHT+
Sbjct: 386 HDHTK 390
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 LHDHTRKED 9
HD +++ED
Sbjct: 1034 FHDDSKEED 1042
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 LHDHTRKED 9
HD +++ED
Sbjct: 1034 FHDDSKEED 1042
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 LHDHTRKED 9
HD +++ED
Sbjct: 1034 FHDDSKEED 1042
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 HDHT 5
HDHT
Sbjct: 2799 HDHT 2802
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 HDHT 5
HDHT
Sbjct: 2805 HDHT 2808
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LHDHTRKE 8
L+DHT+ +
Sbjct: 1191 LYDHTQTD 1198
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 1 LHDHTRKE 8
L+DHT+ +
Sbjct: 1191 LYDHTQTD 1198
96|SequenceR|485|476|GDLCLLHDHT
>sp|NSS_UUKS|NON-STRUCTURAL protein NS-S|Uukuniemi virus (strain S23) (UUKV)
Query: 2 DLCLLH 7
DLCLLH
Sbjct: 177 DLCLLH 182
>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain Dumas)
Query: 4 CLLHDHT 10
CLLHD T
Sbjct: 299 CLLHDST 305
>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 GDLCLLHDH 9
GD C L DH
Sbjct: 448 GDPCWLEDH 456
>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 GDLCLLHDH 9
GD C L DH
Sbjct: 463 GDPCWLEDH 471
>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)
Query: 1 GDLCLLHDH 9
G LC+L DH
Sbjct: 374 GRLCMLVDH 382
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 GDLCLLHDHT 10
GDLC DH+
Sbjct: 1170 GDLCCSLDHS 1179
>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)
Query: 2 DLCLLHD 8
+LC LHD
Sbjct: 139 ELCFLHD 145
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 2 DLCLLHD 8
+LC LHD
Sbjct: 143 ELCFLHD 149
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 2 DLCLLHD 8
+LC LHD
Sbjct: 139 ELCFLHD 145
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 2 DLCLLHD 8
+LC LHD
Sbjct: 139 ELCFLHD 145
>sp|UL30_HCMVA|UNCHARACTERIZED protein UL30|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GDLCLLHD 8
GD C +HD
Sbjct: 27 GDSCFVHD 34
>sp|PRTP_HHV2|PROCESSING and transport protein|Human herpesvirus 2 (HHV-2) (Human
Query: 2 DLCLLHD 8
+LC LHD
Sbjct: 143 ELCFLHD 149
>sp|UL30_HCMVM|UNCHARACTERIZED protein UL30|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GDLCLLHD 8
GD C +HD
Sbjct: 27 GDSCFVHD 34
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 4 CLLHDH 9
CLLH H
Sbjct: 883 CLLHPH 888
Query: 1 GDLCLLHD 8
GD C L+D
Sbjct: 654 GDRCDLYD 661
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 LCLLHDH 9
+C+LH H
Sbjct: 877 MCVLHPH 883
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 2 DLCLLHD 8
D CL+HD
Sbjct: 560 DPCLVHD 566
>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus
Query: 4 CLLHDHT 10
C LHD +
Sbjct: 445 CFLHDQS 451
>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate
Query: 4 CLLHDHT 10
C LHD +
Sbjct: 445 CFLHDQS 451
>sp|ETF2_VACCT|EARLY transcription factor 82 kDa|Vaccinia virus (strain Tian Tan)
Query: 4 CLLHDHT 10
C LHD +
Sbjct: 445 CFLHDQS 451
>sp|ETF2_VACCC|EARLY transcription factor 82 kDa|Vaccinia virus (strain Copenhagen)
Query: 4 CLLHDHT 10
C LHD +
Sbjct: 445 CFLHDQS 451
>sp|ETF2_VACCA|EARLY transcription factor 82 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 4 CLLHDHT 10
C LHD +
Sbjct: 445 CFLHDQS 451
>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)
Query: 4 CLLHDHT 10
C LHD +
Sbjct: 445 CFLHDQS 451
>sp|UL95_EBVB9|LATE gene expression regulator BGLF3|Epstein-Barr virus (strain B95-8)
Query: 3 LCLLH 7
LCLLH
Sbjct: 263 LCLLH 267
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 GDLCLLHDHT 10
GDL +DH+
Sbjct: 1181 GDLSCSYDHS 1190
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 GDLCLLHDHT 10
GDL +DH+
Sbjct: 1180 GDLSCSYDHS 1189
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 1 GDLCLL 6
G+LCLL
Sbjct: 73 GNLCLL 78
>sp|NEF_HV2KR|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 2 DLCLLH 7
D CLLH
Sbjct: 188 DHCLLH 193
>sp|TEGU_HCMV|TEGUMENT protein|Human cytomegalovirus (HHV-5) (Human herpesvirus
Query: 4 CLLHDH 9
CLLH H
Sbjct: 419 CLLHCH 424
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 4 CLLHDH 9
C+LH H
Sbjct: 878 CVLHPH 883
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 DLCLLH 7
D CLLH
Sbjct: 584 DECLLH 589
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 2 DLCLLH 7
D CLLH
Sbjct: 584 DECLLH 589
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 2 DLCLLH 7
D CLLH
Sbjct: 584 DECLLH 589
>sp|NEF_HV1ND|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 DLCLLH 7
D CLLH
Sbjct: 162 DNCLLH 167
>sp|NEF_HV196|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 DLCLLH 7
D CLLH
Sbjct: 170 DNCLLH 175
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 5 LLHDH 9
+LHDH
Sbjct: 72 ILHDH 76
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 5 LLHDH 9
+LHDH
Sbjct: 72 ILHDH 76
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 3 LCLLHDH 9
LC+ H+H
Sbjct: 784 LCINHNH 790
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 DLCLLH 7
D+C++H
Sbjct: 4342 DMCVIH 4347
>sp|NEF_HV2SB|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 3 LCLLH 7
LCL+H
Sbjct: 192 LCLMH 196
>sp|IORF_CVHOC|PROTEIN I|Human coronavirus OC43 (HCoV-OC43)
Query: 3 LCLLHDHT 10
+CLLH +
Sbjct: 65 VCLLHQES 72
>sp|GLYCO_ABLVB|GLYCOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 5 LLHDHT 10
LLH HT
Sbjct: 399 LLHQHT 404
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 DLCLLH 7
D C+LH
Sbjct: 4696 DRCILH 4701
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 DLCLLH 7
++C+LH
Sbjct: 4367 EMCILH 4372
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 DLCLLH 7
D C+LH
Sbjct: 4673 DRCILH 4678
97|SequenceR|490|481|GKVGGGDLCL
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 1 GKVGGGDLC 9
GK GGGD C
Sbjct: 302 GKRGGGDSC 310
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 1 GKVGGGDLC 9
G+ GGGD C
Sbjct: 300 GRRGGGDSC 308
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GKVGGGDLCL 10
G GGG +C+
Sbjct: 410 GAAGGGAICV 419
>sp|VGP3_EBVP3|ENVELOPE glycoprotein GP340|Epstein-Barr virus (strain P3HR-1) (HHV-4)
Query: 2 KVGGGDLCL 10
K GGD C+
Sbjct: 291 KASGGDYCI 299
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GKVGGGDLCL 10
G GGG +C+
Sbjct: 410 GAAGGGAICV 419
>sp|GP350_EBVG|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 KVGGGDLCL 10
K GGD C+
Sbjct: 291 KASGGDYCI 299
>sp|GP350_EBVB9|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 KVGGGDLCL 10
K GGD C+
Sbjct: 291 KASGGDYCI 299
>sp|GP350_EBVA8|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 KVGGGDLCL 10
K GGD C+
Sbjct: 291 KASGGDYCI 299
>sp|VL2_HPV65|MINOR capsid protein L2|Human papillomavirus 65
Query: 1 GKVGGGDL 8
G+VGGG L
Sbjct: 128 GEVGGGGL 135
>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype 1
Query: 3 VGGGDL 8
+GGGDL
Sbjct: 131 LGGGDL 136
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 3 VGGGDLC 9
V GDLC
Sbjct: 1167 VNNGDLC 1173
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 1 GKVGGGDLCL 10
G+V G+LC
Sbjct: 893 GRVPMGELCF 902
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 1 GKVGGGDLCL 10
G+V G+LC
Sbjct: 893 GRVPMGELCF 902
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 1 GKVGGGDLCL 10
G+V G+LC
Sbjct: 893 GRVPMGELCF 902
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 GGGDLCL 10
GG +CL
Sbjct: 3977 GGASICL 3983
98|SequenceR|495|486|QIIILGKVGG
>sp|VU3_HHV7J|PROTEIN U3|Human herpesvirus 7 (strain JI)
Query: 2 IIILGKVG 9
+I+LGKVG
Sbjct: 155 VILLGKVG 162
>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)
Query: 4 ILGKVGG 10
ILG+VGG
Sbjct: 133 ILGRVGG 139
>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)
Query: 4 ILGKVGG 10
ILG+VGG
Sbjct: 133 ILGRVGG 139
>sp|TEG5_HHV2H|TEGUMENT protein UL47|Human herpesvirus 2 (strain HG52)
Query: 4 ILGKVGG 10
+LG+VGG
Sbjct: 136 VLGRVGG 142
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 4 ILGKVGG 10
+ GKVGG
Sbjct: 1127 LFGKVGG 1133
>sp|OX2V_HHV8P|OX-2 membrane glycoprotein homolog|Human herpesvirus 8 type P
Query: 2 IIILGKVGG 10
+ +LG VGG
Sbjct: 16 LALLGAVGG 24
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 3 IILGKVG 9
++LGK+G
Sbjct: 1905 LLLGKIG 1911
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 IILGKVG 9
++LGK+G
Sbjct: 1905 LLLGKIG 1911
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 IILGKVG 9
++LGK+G
Sbjct: 1905 LLLGKIG 1911
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 4 ILGKVG 9
+LGKVG
Sbjct: 89 LLGKVG 94
99|SequenceR|500|491|IAILLQIIIL
***** No hits found ******
100|SequenceR|505|496|GSAKEIAILL
>sp|VP3_ROTYO|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8]) (RV-A)
Query: 2 SAKEIAIL 9
SAKE AIL
Sbjct: 661 SAKEFAIL 668
>sp|VP3_ROTHW|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8])
Query: 2 SAKEIAIL 9
SAKE AIL
Sbjct: 661 SAKEFAIL 668
>sp|VP3_ROTHU|PROTEIN VP3|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11]) (RV-A)
Query: 2 SAKEIAIL 9
SAKE AIL
Sbjct: 661 SAKEFAIL 668
>sp|VP3_ROTHP|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/P/1974/G3P1A[8])
Query: 2 SAKEIAIL 9
SAKE AIL
Sbjct: 661 SAKEFAIL 668
>sp|VP3_ROTAD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/D/1974/G1P1A[8])
Query: 2 SAKEIAIL 9
SAKE AIL
Sbjct: 661 SAKEFAIL 668
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 SAKEIAILL 10
S +EIAIL+
Sbjct: 82 SQREIAILI 90
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 SAKEIAILL 10
S +EIAIL+
Sbjct: 82 SQREIAILI 90
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 SAKEIAILL 10
S +EIAIL+
Sbjct: 82 SQREIAILI 90
>sp|VP3_ROTWI|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 2 SAKEIAIL 9
SA+E AIL
Sbjct: 661 SAREFAIL 668
>sp|VP3_ROTHT|PROTEIN VP3|Rotavirus A (strain RVA/Human/United Kingdom/ST3/1975/G4P2A[6])
Query: 2 SAKEIAIL 9
SA+E AIL
Sbjct: 661 SAREFAIL 668
>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)
Query: 2 SAKEIAIL 9
SA+E AIL
Sbjct: 661 SAREFAIL 668
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 GSAKEIAI 8
GSAK+I++
Sbjct: 1053 GSAKQISL 1060
101|SequenceR|510|501|DKTAVGSAKE
***** No hits found ******
102|SequenceR|515|506|VWDFLDKTAV
>sp|ICP27_EBVG|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain GD1)
Query: 2 WDFLDKT 8
WD DKT
Sbjct: 93 WDLQDKT 99
>sp|ICP27_EBVB9|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain B95-8)
Query: 2 WDFLDKT 8
WD DKT
Sbjct: 93 WDLQDKT 99
>sp|ICP27_EBVA8|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain AG876)
Query: 2 WDFLDKT 8
WD DKT
Sbjct: 93 WDLQDKT 99
>sp|GO_HCMVM|ENVELOPE glycoprotein O|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VWDFLD 6
+WD+LD
Sbjct: 424 LWDYLD 429
>sp|GO_HCMVA|GLYCOPROTEIN O|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VWDFLD 6
+WD+LD
Sbjct: 418 LWDYLD 423
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 DFLDKT 8
DFLD+T
Sbjct: 676 DFLDRT 681
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 WDFLDK 7
W+F+DK
Sbjct: 2954 WNFVDK 2959
>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 1 VWDFLDKT 8
+ DF+DKT
Sbjct: 627 IHDFVDKT 634
>sp|NCAP_PIARV|NUCLEOPROTEIN mammarenavirus (PICV) (Pichind mammarenavirus)
Query: 1 VWDFLDKT 8
VWD D T
Sbjct: 159 VWDIKDNT 166
>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 VWDFLDKT 8
+ DF+DKT
Sbjct: 627 IHDFVDKT 634
>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 1 VWDFLDKT 8
+ DF+DKT
Sbjct: 627 IHDFVDKT 634
>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 VWDFLDKT 8
+ DF+DKT
Sbjct: 627 IHDFVDKT 634
>sp|GCVK_HHV6Z|PROBABLE ganciclovir kinase|Human herpesvirus 6B (strain Z29)
Query: 1 VWDFLDK 7
++DFLD+
Sbjct: 489 IYDFLDE 495
>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17
Query: 2 WDFLDK 7
WD++D+
Sbjct: 489 WDYIDQ 494
>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VWDFLDKTA 9
VW D+TA
Sbjct: 699 VWALRDQTA 707
>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)
Query: 1 VWDFLDKTA 9
VW D+TA
Sbjct: 698 VWALRDQTA 706
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 1 VWDFLDKTA 9
V+DF +KT
Sbjct: 1238 VYDFRNKTG 1246
>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37
Query: 2 WDFLDK 7
WD++D+
Sbjct: 489 WDYIDQ 494
>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15
Query: 2 WDFLDK 7
WD++D+
Sbjct: 482 WDYIDQ 487
>sp|TAX_HTL1C|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 VWDFLDKT 8
+W F D T
Sbjct: 247 IWTFTDGT 254
>sp|TAX_HTL1A|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 VWDFLDKT 8
+W F D T
Sbjct: 247 IWTFTDGT 254
>sp|SF33K_ADE02|PROTEIN 33K|Human adenovirus C serotype 2
Query: 2 WDFLDKTA 9
WD LD+ +
Sbjct: 39 WDSLDEAS 46
>sp|PKG2_ADE02|PACKAGING protein 2|Human adenovirus C serotype 2
Query: 2 WDFLDKTA 9
WD LD+ +
Sbjct: 39 WDSLDEAS 46
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 2 WDFLDKTAV 10
W + D TAV
Sbjct: 2051 WSWSDDTAV 2059
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 VWDFLDKT 8
+W++LD T
Sbjct: 669 IWNWLDIT 676
>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human
Query: 2 WDFLD 6
WD++D
Sbjct: 492 WDYMD 496
103|SequenceR|520|511|TSTGAVWDFL
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 2 STGAVWDF 9
STG+ W F
Sbjct: 343 STGSAWSF 350
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 2 STGAVWDF 9
STG+ W F
Sbjct: 1674 STGSAWSF 1681
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 2 STGAVW 7
STG VW
Sbjct: 695 STGDVW 700
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 GAVWD 8
GA+WD
Sbjct: 4080 GALWD 4084
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 3 TGAVWD 8
+GA+WD
Sbjct: 1499 SGALWD 1504
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 TGAVWD 8
+GA+WD
Sbjct: 1475 SGALWD 1480
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 TGAVWD 8
+GA+WD
Sbjct: 1475 SGALWD 1480
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 TGAVWD 8
+GA+WD
Sbjct: 1475 SGALWD 1480
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 3 TGAVWD 8
+GA+WD
Sbjct: 1503 SGALWD 1508
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 3 TGAVWD 8
+GA+WD
Sbjct: 1503 SGALWD 1508
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 TGAVWD 8
+GA+WD
Sbjct: 1475 SGALWD 1480
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 TGAVWD 8
+GA+WD
Sbjct: 1475 SGALWD 1480
>sp|VL1_HPV48|MAJOR capsid protein L1|Human papillomavirus type 48
Query: 2 STGAVWDF 9
+TG WD
Sbjct: 163 ATGEYWDL 170
104|SequenceR|525|516|ALIGGTSTGA
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 2 LIGGTSTG 9
LIGG STG
Sbjct: 95 LIGGFSTG 102
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 LIGGTSTG 9
LIGG STG
Sbjct: 95 LIGGFSTG 102
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 GGTSTG 9
GGTS+G
Sbjct: 5070 GGTSSG 5075
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 GGTSTG 9
GGTS+G
Sbjct: 5047 GGTSSG 5052
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 GGTSTG 9
GGTS+G
Sbjct: 5056 GGTSSG 5061
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 GGTSTG 9
GGTS+G
Sbjct: 5043 GGTSSG 5048
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 GGTSTG 9
GGTS+G
Sbjct: 5081 GGTSSG 5086
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 GGTSTG 9
GGTS+G
Sbjct: 5101 GGTSSG 5106
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 GGTSTG 9
GGTS+G
Sbjct: 5131 GGTSSG 5136
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 2 LIGGTSTGA 10
L G TSTGA
Sbjct: 86 LEGATSTGA 94
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 2 LIGGTSTGA 10
L G TSTGA
Sbjct: 86 LEGATSTGA 94
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 LIGGTS 7
L+GGTS
Sbjct: 1213 LVGGTS 1218
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 2 LIGGTS 7
L+GGTS
Sbjct: 1212 LVGGTS 1217
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 LIGGTS 7
L+GGTS
Sbjct: 1215 LVGGTS 1220
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 1 ALIGGTSTGA 10
AL+ GT+T
Sbjct: 858 ALVSGTATAG 867
>sp|VIE2_HCMVM|VIRAL transcription factor IE2|Human cytomegalovirus (strain Merlin)
Query: 4 GGTSTG 9
GG STG
Sbjct: 316 GGASTG 321
105|SequenceR|530|521|HLIALALIGG
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 4 ALALIGG 10
ALAL GG
Sbjct: 1821 ALALAGG 1827
>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 LALIGG 10
LAL+GG
Sbjct: 421 LALVGG 426
106|SequenceR|535|526|AMSKSHLIAL
>sp|GH_HHV7J|ENVELOPE glycoprotein H|Human herpesvirus 7 (strain JI)
Query: 2 MSKSHLI 8
M+KSHL+
Sbjct: 337 MTKSHLL 343
>sp|UL88_HCMVM|PROTEIN UL88|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 AMSKSHLIAL 10
+S+ HL+AL
Sbjct: 417 GVSRRHLVAL 426
>sp|UL88_HCMVA|PROTEIN UL88|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 AMSKSHLIAL 10
+S+ HL+AL
Sbjct: 417 GVSRRHLVAL 426
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 MSKSHLIAL 10
++KSH IAL
Sbjct: 2703 VAKSHNIAL 2711
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 MSKSHLIAL 10
++KSH IAL
Sbjct: 2703 VAKSHNIAL 2711
>sp|VE5_HPV41|PROBABLE protein E5|Human papillomavirus type 41
Query: 1 AMSKSHLI 8
AMSK HL+
Sbjct: 68 AMSKLHLL 75
107|SequenceR|540|531|MGRMYAMSKS
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 1 MGRMYAM 7
+GRM+AM
Sbjct: 625 VGRMFAM 631
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 1 MGRMYAM 7
+GRM+AM
Sbjct: 625 VGRMFAM 631
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 1 MGRMYAM 7
+GRM+AM
Sbjct: 625 VGRMFAM 631
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 MGRMYAM 7
+GRM+AM
Sbjct: 560 VGRMFAM 566
>sp|NCAP_HRSV1|NUCLEOPROTEIN respiratory syncytial virus B
Query: 1 MGRMYAMSK 9
+G +YAMS+
Sbjct: 65 IGMLYAMSR 73
>sp|NCAP_HRSVB|NUCLEOPROTEIN respiratory syncytial virus B
Query: 1 MGRMYAMSK 9
+G +YAMS+
Sbjct: 65 IGMLYAMSR 73
>sp|NCAP_HRSVA|NUCLEOPROTEIN respiratory syncytial virus A
Query: 1 MGRMYAMSK 9
+G +YAMS+
Sbjct: 65 IGMLYAMSR 73
>sp|NCAP_HRSV|NUCLEOPROTEIN respiratory syncytial virus
Query: 1 MGRMYAMSK 9
+G +YAMS+
Sbjct: 65 IGMLYAMSR 73
>sp|VU1_HHV6U|PROTEIN U1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 MGRMYAMS 8
+GR+YA S
Sbjct: 260 VGRVYAAS 267
108|SequenceR|545|536|KMRFYMGRMY
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 KMRFYMGR 8
KM+FYM +
Sbjct: 1871 KMKFYMDK 1878
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 KMRFYMGR 8
KM+FYM +
Sbjct: 1871 KMKFYMDK 1878
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 KMRFYMGR 8
KM+FYM +
Sbjct: 1871 KMKFYMDK 1878
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 KMRFYMGRM 9
K R+Y G+M
Sbjct: 3283 KYRYYSGKM 3291
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 KMRFYMGRM 9
K R+Y G+M
Sbjct: 3253 KYRYYSGKM 3261
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 KMRFYMGRM 9
K R+Y G+M
Sbjct: 3233 KYRYYSGKM 3241
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 KMRFYMGRM 9
K R+Y G+M
Sbjct: 3195 KYRYYSGKM 3203
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 KMRFYMGRM 9
K R+Y G+M
Sbjct: 3283 KYRYYSGKM 3291
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 KMRFYMGRM 9
K R+Y G+M
Sbjct: 3253 KYRYYSGKM 3261
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 KMRFYMGRM 9
K R+Y G+M
Sbjct: 3195 KYRYYSGKM 3203
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 KMRFYMGRM 9
K R+Y G+M
Sbjct: 3233 KYRYYSGKM 3241
>sp|VTF3S_MONPV|INTERMEDIATE transcription factor 3 small|Monkeypox virus (MPXV)
Query: 2 MRFYMGRMY 10
+RF++ R+Y
Sbjct: 55 LRFFLQRLY 63
>sp|VTF3S_VARV|INTERMEDIATE transcription factor 3 small|Variola virus
Query: 2 MRFYMGRMY 10
+RF++ R+Y
Sbjct: 55 LRFFLQRLY 63
>sp|VTF3S_VAR67|INTERMEDIATE transcription factor 3 small|Variola virus (isolate
Query: 2 MRFYMGRMY 10
+RF++ R+Y
Sbjct: 55 LRFFLQRLY 63
>sp|VTF3S_VACCC|INTERMEDIATE transcription factor 3 small|Vaccinia virus (strain Copenhagen)
Query: 2 MRFYMGRMY 10
+RF++ R+Y
Sbjct: 55 LRFFLQRLY 63
>sp|CAPSD_HASV6|CAPSID polyprotein VP90|Human astrovirus-6 (HAstV-6)
Query: 2 MRFYMGRMY 10
+RFY G Y
Sbjct: 578 VRFYQGSWY 586
>sp|VTF3S_VACCA|INTERMEDIATE transcription factor 3 small|Vaccinia virus (strain Ankara)
Query: 2 MRFYMGRMY 10
+RF++ R+Y
Sbjct: 55 LRFFLQRLY 63
>sp|DR8_HHV6U|UNCHARACTERIZED protein DR8|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 RFYMGRMY 10
RFY GR++
Sbjct: 76 RFYHGRVH 83
>sp|VL2_HPV1|MINOR capsid protein L2|Human papillomavirus type 1 (Human
Query: 3 RFYMGRMY 10
RFY R+Y
Sbjct: 250 RFYNRRLY 257
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 KMRFYMGR 8
KM+FY+ +
Sbjct: 1858 KMKFYLDK 1865
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 KMRFYMGR 8
KM+FY+ +
Sbjct: 1859 KMKFYLDK 1866
>sp|U10_HHV6U|U10 protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 MRFYMGRMY 10
+RFY G ++
Sbjct: 41 LRFYTGLLH 49
>sp|U10_HHV6Z|PROTEIN U10|Human herpesvirus 6B (strain Z29)
Query: 2 MRFYMGRMY 10
+RFY G ++
Sbjct: 41 LRFYSGLLH 49
>sp|U10_HHV6H|PROTEIN U10|Human herpesvirus 6B (HHV-6 variant
Query: 2 MRFYMGRMY 10
+RFY G ++
Sbjct: 41 LRFYSGLLH 49
109|SequenceR|550|541|RFVEDKMRFY
>sp|F13_MCV2|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 2
Query: 2 FVEDKMRFY 10
+V DK RFY
Sbjct: 125 WVSDKRRFY 133
>sp|F13_MCV1|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 1
Query: 2 FVEDKMRFY 10
+V DK RFY
Sbjct: 125 WVSDKRRFY 133
>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)
Query: 1 RFVEDKMRF 9
+F+ DK++F
Sbjct: 116 KFISDKIKF 124
>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)
Query: 1 RFVEDKMRF 9
+F+ DK++F
Sbjct: 116 KFISDKIKF 124
>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)
Query: 1 RFVEDKMRF 9
+F+ DK++F
Sbjct: 116 KFISDKIKF 124
>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)
Query: 1 RFVEDKMRF 9
+F+ DK++F
Sbjct: 116 KFISDKIKF 124
>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 RFVEDKMRF 9
+F+ DK++F
Sbjct: 116 KFISDKIKF 124
>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 RFVEDKMRF 9
+F+ DK++F
Sbjct: 116 KFISDKIKF 124
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 3 VEDKMRFY 10
V DK RFY
Sbjct: 1468 VNDKGRFY 1475
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 3 VEDKMRFY 10
V DK RFY
Sbjct: 1465 VNDKGRFY 1472
>sp|X_PAVHV|UNCHARACTERIZED protein X|Human parvovirus B19 (strain HV)
Query: 3 VEDKMRFY 10
+E+KM++Y
Sbjct: 20 LEEKMQYY 27
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 1 RFVEDKMRF 9
+F+E K+RF
Sbjct: 727 KFLEPKVRF 735
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 1 RFVEDKMRFY 10
R++E+K F+
Sbjct: 543 RYIEEKETFH 552
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 5 DKMRFY 10
+KM+FY
Sbjct: 1857 EKMKFY 1862
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 5 DKMRFY 10
+KM+FY
Sbjct: 1858 EKMKFY 1863
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 1 RFVEDKMRFY 10
R++E+K F+
Sbjct: 543 RYIEEKEDFH 552
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 1 RFVEDKMRFY 10
R++E+K F+
Sbjct: 543 RYIEEKEDFH 552
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 1 RFVEDKMRFY 10
+F+ K+RF+
Sbjct: 541 KFIIKKLRFF 550
>sp|ICP27_HHV1E|MRNA export factor|Human herpesvirus 1 (strain HFEM)
Query: 3 VEDKMRFY 10
V +KM FY
Sbjct: 455 VGEKMHFY 462
>sp|ICP27_HHV11|MRNA export factor|Human herpesvirus 1 (strain 17)
Query: 3 VEDKMRFY 10
V +KM FY
Sbjct: 456 VGEKMHFY 463
110|SequenceR|555|546|YPRSGRFVED
>sp|HEMA_INBVM|HEMAGGLUTININ B virus (strain B/Victoria/19/1989)
Query: 2 PRSGRFVED 10
P+SGR V D
Sbjct: 256 PQSGRIVVD 264
>sp|HEMA_INBVL|HEMAGGLUTININ B virus (strain B/Victoria/103/1989)
Query: 2 PRSGRFVED 10
P+SGR V D
Sbjct: 254 PQSGRIVVD 262
>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)
Query: 2 PRSGRFVED 10
P+SGR V D
Sbjct: 256 PQSGRIVVD 264
>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)
Query: 2 PRSGRFVED 10
P+SGR V D
Sbjct: 249 PQSGRIVVD 257
>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)
Query: 2 PRSGRFVED 10
P+SGR V D
Sbjct: 247 PQSGRIVVD 255
>sp|HEMA_INBTE|HEMAGGLUTININ B virus (strain B/Texas/1/1991)
Query: 2 PRSGRFVED 10
P+SGR V D
Sbjct: 254 PQSGRIVVD 262
>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)
Query: 2 PRSGRFVED 10
P+SGR V D
Sbjct: 254 PQSGRIVVD 262
>sp|HEMA_INBP3|HEMAGGLUTININ B virus (strain B/Paris/329/1990)
Query: 2 PRSGRFVED 10
P+SGR V D
Sbjct: 256 PQSGRIVVD 264
>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)
Query: 2 PRSGRFVED 10
P+SGR V D
Sbjct: 254 PQSGRIVVD 262
>sp|HEMA_INBNA|HEMAGGLUTININ B virus (strain B/Nagasaki/1/1987)
Query: 2 PRSGRFVED 10
P+SGR V D
Sbjct: 241 PQSGRIVVD 249
>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)
Query: 2 PRSGRFVED 10
P+SGR V D
Sbjct: 249 PQSGRIVVD 257
>sp|HEMA_INBIN|HEMAGGLUTININ B virus (strain B/India/3/1989)
Query: 2 PRSGRFVED 10
P+SGR V D
Sbjct: 256 PQSGRIVVD 264
>sp|HEMA_INB|HEMAGGLUTININ B virus (strain B/ID/1986)
Query: 2 PRSGRFVED 10
P+SGR V D
Sbjct: 252 PQSGRIVVD 260
>sp|HEMA_INBHL|HEMAGGLUTININ B virus (strain B/Hong
Query: 2 PRSGRFVED 10
P+SGR V D
Sbjct: 254 PQSGRIVVD 262
>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong
Query: 2 PRSGRFVED 10
P+SGR V D
Sbjct: 246 PQSGRIVVD 254
>sp|HEMA_INBGD|HEMAGGLUTININ B virus (strain B/Guangdong/55/1989)
Query: 2 PRSGRFVED 10
P+SGR V D
Sbjct: 254 PQSGRIVVD 262
>sp|HEMA_INBF9|HEMAGGLUTININ B virus (strain B/Finland/151/1990)
Query: 2 PRSGRFVED 10
P+SGR V D
Sbjct: 241 PQSGRIVVD 249
>sp|HEMA_INBF8|HEMAGGLUTININ B virus (strain B/Finland/150/1990)
Query: 2 PRSGRFVED 10
P+SGR V D
Sbjct: 241 PQSGRIVVD 249
>sp|HEMA_INBF7|HEMAGGLUTININ B virus (strain B/Finland/149/1990)
Query: 2 PRSGRFVED 10
P+SGR V D
Sbjct: 241 PQSGRIVVD 249
>sp|HEMA_INBF6|HEMAGGLUTININ B virus (strain B/Finland/148/1990)
Query: 2 PRSGRFVED 10
P+SGR V D
Sbjct: 241 PQSGRIVVD 249
>sp|HEMA_INBF5|HEMAGGLUTININ B virus (strain B/Finland/147/1990)
Query: 2 PRSGRFVED 10
P+SGR V D
Sbjct: 241 PQSGRIVVD 249
>sp|HEMA_INBF4|HEMAGGLUTININ B virus (strain B/Finland/146/1990)
Query: 2 PRSGRFVED 10
P+SGR V D
Sbjct: 241 PQSGRIVVD 249
>sp|HEMA_INBF3|HEMAGGLUTININ B virus (strain B/Finland/145/1990)
Query: 2 PRSGRFVED 10
P+SGR V D
Sbjct: 241 PQSGRIVVD 249
>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)
Query: 2 PRSGRFVED 10
P+SGR V D
Sbjct: 254 PQSGRIVVD 262
>sp|HEMA_INBBK|HEMAGGLUTININ B virus (strain B/Bangkok/163/1990)
Query: 2 PRSGRFVED 10
P+SGR V D
Sbjct: 254 PQSGRIVVD 262
>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)
Query: 2 PRSGRFVED 10
P+SGR V D
Sbjct: 256 PQSGRIVVD 264
>sp|HEMA_INBAA|HEMAGGLUTININ B virus (strain B/Ann
Query: 2 PRSGRFVED 10
P+SGR V D
Sbjct: 248 PQSGRIVVD 256
>sp|HEMA_INBNY|HEMAGGLUTININ B virus (strain B/New
Query: 2 PRSGRFVED 10
P+SGR V D
Sbjct: 254 PQSGRIVVD 262
>sp|HEMA_INBTF|HEMAGGLUTININ B virus (strain B/Texas/4/1990)
Query: 2 PRSGRFVED 10
P+SGR V D
Sbjct: 254 PQSGRIVVD 262
>sp|HEMA_INBP9|HEMAGGLUTININ B virus (strain B/Panama/45/1990)
Query: 2 PRSGRFVED 10
P+SGR V D
Sbjct: 254 PQSGRIVVD 262
>sp|HEMA_INBSD|HEMAGGLUTININ B virus (strain B/South
Query: 2 PRSGRFVED 10
P+SGR V D
Sbjct: 254 PQSGRIVVD 262
>sp|HEMA_INBFU|HEMAGGLUTININ B virus (strain B/Fukuoka/80/1981)
Query: 2 PRSGRFVED 10
P+SGR V D
Sbjct: 239 PQSGRIVVD 247
>sp|HEMA_INBHM|HEMAGGLUTININ B virus (strain B/Hong
Query: 2 PRSGRFVED 10
P+SGR V D
Sbjct: 254 PQSGRIVVD 262
>sp|HEMA_INBF2|HEMAGGLUTININ B virus (strain B/Finland/56/1988)
Query: 2 PRSGRFVED 10
P+SGR V D
Sbjct: 241 PQSGRIVVD 249
>sp|HEMA_INBF1|HEMAGGLUTININ B virus (strain B/Finland/24/1985)
Query: 2 PRSGRFVED 10
P+SGR V D
Sbjct: 241 PQSGRIVVD 249
>sp|HEMA_INBIB|HEMAGGLUTININ B virus (strain B/Ibaraki/2/1985)
Query: 2 PRSGRFVED 10
P+SGR V D
Sbjct: 241 PQSGRIVVD 249
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 2 PRSGRFVED 10
PR R +ED
Sbjct: 1711 PRGTRLIED 1719
>sp|HEMA_INBYB|HEMAGGLUTININ B virus (strain B/Yamagata/16/1988)
Query: 2 PRSGRFVED 10
P+SGR V D
Sbjct: 239 PQSGRIVVD 247
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 1 YPRSGRFVE 9
YPR R+V+
Sbjct: 288 YPRCDRYVK 296
>sp|ETF2_VACCT|EARLY transcription factor 82 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 YPRSGR 6
YP SGR
Sbjct: 701 YPNSGR 706
>sp|ETF2_VACCC|EARLY transcription factor 82 kDa|Vaccinia virus (strain Copenhagen)
Query: 1 YPRSGR 6
YP SGR
Sbjct: 701 YPNSGR 706
>sp|ETF2_VACCA|EARLY transcription factor 82 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 YPRSGR 6
YP SGR
Sbjct: 701 YPNSGR 706
>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)
Query: 1 YPRSGR 6
YP SGR
Sbjct: 701 YPNSGR 706
>sp|FUS_HMPVC|FUSION glycoprotein F0|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 2 PRSGRFV 8
PR RFV
Sbjct: 98 PRQSRFV 104
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 2 PRSGRFVED 10
PR GR V D
Sbjct: 158 PRGGRAVAD 166
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 2 PRSGRFVED 10
PR GR V D
Sbjct: 158 PRGGRAVAD 166
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 2 PRSGRFVED 10
P S R +ED
Sbjct: 1723 PESSRLLED 1731
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 2 PRSGRF 7
P+SG+F
Sbjct: 95 PKSGKF 100
>sp|CVC2_HCMVM|CAPSID vertex component 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PRSGRFV 8
PR+G+F
Sbjct: 449 PRTGKFT 455
>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PRSGRFV 8
PR+G+F
Sbjct: 455 PRTGKFT 461
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PRSGR 6
PRSGR
Sbjct: 532 PRSGR 536
111|SequenceR|560|551|LPGSEYPRSG
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 2 PGSEYPRSG 10
P SE PR G
Sbjct: 919 PFSEIPRQG 927
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 1 LPGSEYPRSG 10
LPG E P +G
Sbjct: 558 LPGGEVPPAG 567
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 2 PGSEYPRSG 10
P SE PR G
Sbjct: 919 PFSEIPRQG 927
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 2 PGSEYPRS 9
PG+E P+S
Sbjct: 477 PGAEAPKS 484
>sp|VEGFH_ORFN7|VASCULAR endothelial growth factor homolog|Orf virus (strain NZ7) (OV
Query: 3 GSEYPRS 9
G EYP S
Sbjct: 56 GEEYPES 62
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 1 LPGSEYP 7
+PG EYP
Sbjct: 738 VPGGEYP 744
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 1 LPGSEYP 7
+PG EYP
Sbjct: 738 VPGGEYP 744
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 1 LPGSEYPRS 9
LP YPR+
Sbjct: 1221 LPARHYPRN 1229
>sp|BRRF1_EBVG|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 LPGSEY 6
+PGS+Y
Sbjct: 141 MPGSDY 146
>sp|BRRF1_EBVB9|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LPGSEY 6
+PGS+Y
Sbjct: 141 MPGSDY 146
>sp|BRRF1_EBVA8|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 LPGSEY 6
+PGS+Y
Sbjct: 141 MPGSDY 146
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 LPGSEY 6
+PG+EY
Sbjct: 556 MPGAEY 561
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 PGSEYPR 8
PG E PR
Sbjct: 2632 PGHEEPR 2638
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 LPGSEY 6
+PG+EY
Sbjct: 556 MPGAEY 561
>sp|AN_HHV2|ALKALINE nuclease|Human herpesvirus 2 (HHV-2) (Human
Query: 2 PGSEYPRS 9
PGS +P+S
Sbjct: 52 PGSHWPQS 59
>sp|K81_HHV8P|PROTEIN K8.1|Human herpesvirus 8 type P
Query: 2 PGSEYP 7
P SEYP
Sbjct: 79 PSSEYP 84
>sp|VIRF3_HHV8P|VIRAL IRF3-like protein|Human herpesvirus 8 type P
Query: 1 LPGSEY 6
LPG EY
Sbjct: 91 LPGEEY 96
>sp|NEF_HV2UC|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 2 PGSEYPRS 9
PG YPR+
Sbjct: 145 PGIRYPRT 152
>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)
Query: 1 LPGSEYPRS 9
+PG+ PRS
Sbjct: 345 VPGTAKPRS 353
112|SequenceR|565|556|KLFEELPGSE
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 KLFEELPG 8
K FEE+PG
Sbjct: 1445 KAFEEIPG 1452
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 KLFEELPG 8
KLF +LPG
Sbjct: 2002 KLFPKLPG 2009
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 KLFEELPG 8
KLF LPG
Sbjct: 2002 KLFPRLPG 2009
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 KLFEELPG 8
KLF LPG
Sbjct: 2002 KLFPRLPG 2009
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 KLFEELPG 8
KLF LPG
Sbjct: 2003 KLFPRLPG 2010
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 3 FEELPGSE 10
FEE PG++
Sbjct: 1071 FEECPGTK 1078
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 3 FEELPGSE 10
FEE PG++
Sbjct: 1071 FEECPGTK 1078
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 3 FEELPGSE 10
FEE PG++
Sbjct: 1067 FEECPGTK 1074
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 KLFEELPG 8
KLF ++PG
Sbjct: 2002 KLFPKMPG 2009
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 3 FEELPGS 9
FEE PG+
Sbjct: 1070 FEECPGT 1076
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 KLFEELP 7
KLF ELP
Sbjct: 599 KLFRELP 605
>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A
Query: 5 ELPGSE 10
E+PGSE
Sbjct: 333 EMPGSE 338
>sp|DUT_EBVG|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain GD1)
Query: 3 FEELPG 8
FEE+PG
Sbjct: 248 FEEVPG 253
>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1
Query: 2 LFEELPGSE 10
+FE++ GSE
Sbjct: 240 IFEDVEGSE 248
>sp|DUT_EBVA8|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain
Query: 3 FEELPG 8
FEE+PG
Sbjct: 248 FEEVPG 253
>sp|HEPA_HHV6Z|DNA helicase/primase complex-associated protein|Human herpesvirus 6B
Query: 5 ELPGSE 10
E+PGSE
Sbjct: 333 EMPGSE 338
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 KLFEELPGSE 10
+LF ELP ++
Sbjct: 167 ELFRELPHAD 176
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 KLFEELPGS 9
KLF PGS
Sbjct: 2281 KLFGSQPGS 2289
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 5 ELPGSE 10
ELPG E
Sbjct: 557 ELPGGE 562
>sp|PG181_VACCC|PROTEIN OPG181|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 KLFEELPGS 9
+L +ELP S
Sbjct: 188 RLHDELPSS 196
>sp|PG181_VACCA|PROTEIN OPG181|Vaccinia virus (strain Ankara) (VACV)
Query: 1 KLFEELPGS 9
+L +ELP S
Sbjct: 184 RLHDELPSS 192
>sp|PG181_MONPV|PROTEIN OPG181|Monkeypox virus (MPXV)
Query: 1 KLFEELPGS 9
+L +ELP S
Sbjct: 188 RLHDELPSS 196
113|SequenceR|570|561|EGFERKLFEE
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 4 ERKLFEE 10
ER+LFEE
Sbjct: 218 ERRLFEE 224
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 4 ERKLFEE 10
ER+LFEE
Sbjct: 218 ERRLFEE 224
>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73
Query: 4 ERKLFEE 10
+R+LFEE
Sbjct: 124 KRRLFEE 130
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 2 GFERKL 7
GFER+L
Sbjct: 313 GFERRL 318
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 GFERKL 7
GFER+L
Sbjct: 313 GFERRL 318
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 3 FERKLFEE 10
F RKLF E
Sbjct: 1518 FSRKLFGE 1525
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 EGFERKLFEE 10
+GFE +F E
Sbjct: 11 DGFESPVFSE 20
>sp|REV_HV2RO|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 1 EGFERKL 7
EG +RKL
Sbjct: 8 EGLQRKL 14
>sp|REV_HV2NZ|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 1 EGFERKL 7
EG +RKL
Sbjct: 8 EGLQRKL 14
>sp|PB2_I79A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Kiev/59/1979
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I77A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I02A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 588 GFVRTLFQQ 596
>sp|PB2_I83A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I78A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/18/1978
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I76A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/110/1976
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I75A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Victoria/3/1975
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I75A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Beijing/39/1975
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I72A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/101/1972
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I72A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/102/1972
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I72A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Udorn/307/1972
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PAP1_ORFN2|POLY(A) polymerase catalytic subunit|Orf virus (strain NZ2) (OV
Query: 3 FERKLF 8
F+RKLF
Sbjct: 35 FDRKLF 40
>sp|PB2_I96A3|POLYMERASE basic protein 2|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I96A2|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I93A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I88A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/8/1988
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I80A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/4/1980
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I78A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/2/1978
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I71A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/1/1971
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I70A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Qu/7/1970
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I68A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Northern
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I67A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Tokyo/3/1967
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I56A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I45A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I40A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hickox/1940
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I35A3|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Phila/1935
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I33A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Wilson-Smith/1933
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I07A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I05A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I00A1|POLYMERASE basic protein 2|Influenza A virus (strain A/New
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I77AA|POLYMERASE basic protein 2|Influenza A virus (strain A/Brazil/11/1978
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I47A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Fort
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I83A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chile/1/1983
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I80A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I78A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Mallard/New
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I77AC|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I77AB|POLYMERASE basic protein 2|Influenza A virus (strain A/USSR/90/1977
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I69A0|POLYMERASE basic protein 2|Influenza A virus (strain A/England/878/1969
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I68A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Korea/426/1968
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I68A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I57A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Singapore/1/1957
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I57A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I57A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/1957
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I57A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Japan/305/1957
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I51A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Albany/12/1951
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I43A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Iowa/1943
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I34A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Puerto
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I30A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I18A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Brevig
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I06A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I01A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 587 GFVRTLFQQ 595
>sp|PB2_I00A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Duck/Hong
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I80AA|POLYMERASE basic protein 2|Influenza A virus (strain A/India/6263/1980
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I73A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Port
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I36A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Henry/1936
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I02A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I96A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I85A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I59A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I57A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I03A1|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I03A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I73A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/London/1416/1973
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I67A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I61A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I60A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Ann
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I54A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I02A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I02A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I02A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 593 GFVRTLFQQ 601
>sp|PB2_I02A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I02A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Guinea
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 586 GFVRTLFQQ 594
>sp|PB2_I02A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I000X|POLYMERASE basic protein 2|Influenza A virus (strain A/X-31
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I000F|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Weybridge
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I97A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I97A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I01A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 594 GFVRTLFQQ 602
>sp|PB2_I01A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 258 GFVRTLFQQ 266
>sp|PB2_I01A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 GFERKLFEE 10
GF R LF++
Sbjct: 258 GFVRTLFQQ 266
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 4 ERKLFEE 10
+R+LFEE
Sbjct: 106 KRRLFEE 112
>sp|REV_HV2CA|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 1 EGFERKL 7
EG +RKL
Sbjct: 8 EGLQRKL 14
114|SequenceR|575|566|TMKTHEGFER
>sp|PB2_I83A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chile/1/1983
Query: 2 MKTHEGFE 9
+K HEGFE
Sbjct: 354 LKVHEGFE 361
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 TMKTHEGFER 10
TMK E FER
Sbjct: 2660 TMKVLENFER 2669
>sp|PB2_I97A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 2 MKTHEGFE 9
+K HEG+E
Sbjct: 354 IKVHEGYE 361
>sp|PB2_I97A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 MKTHEGFE 9
+K HEG+E
Sbjct: 354 IKVHEGYE 361
>sp|PB2S1_I96A0|PB2-S1 A virus (strain A/Goose/Guangdong/1/1996
Query: 2 MKTHEGFE 9
+K HEG+E
Sbjct: 354 IKVHEGYE 361
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 3 KTHEGFER 10
+THE F+R
Sbjct: 651 RTHEFFQR 658
>sp|PB2_I80AA|POLYMERASE basic protein 2|Influenza A virus (strain A/India/6263/1980
Query: 2 MKTHEGFE 9
+K HEG+E
Sbjct: 354 LKVHEGYE 361
>sp|PB2_I96A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 2 MKTHEGFE 9
+K HEG+E
Sbjct: 354 IKVHEGYE 361
>sp|PB2_I05A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 2 MKTHEGFE 9
+K HEG+E
Sbjct: 354 IKVHEGYE 361
>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)
Query: 3 KTHEGFER 10
KTH FER
Sbjct: 252 KTHLNFER 259
>sp|PB2_I77AA|POLYMERASE basic protein 2|Influenza A virus (strain A/Brazil/11/1978
Query: 2 MKTHEGFE 9
+K HEG+E
Sbjct: 354 IKVHEGYE 361
>sp|PB2_I77AB|POLYMERASE basic protein 2|Influenza A virus (strain A/USSR/90/1977
Query: 2 MKTHEGFE 9
+K HEG+E
Sbjct: 354 IKVHEGYE 361
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 3 KTHEGFER 10
+THE FE+
Sbjct: 637 RTHEFFEK 644
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 3 KTHEGFER 10
+THE FE+
Sbjct: 627 RTHEFFEK 634
>sp|PB2_I78A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/18/1978
Query: 2 MKTHEGFE 9
+K HEG+E
Sbjct: 354 IKVHEGYE 361
>sp|PB2_I78A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/2/1978
Query: 2 MKTHEGFE 9
+K HEG+E
Sbjct: 354 IKVHEGYE 361
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 3 KTHEGFER 10
+THE FE+
Sbjct: 626 RTHEFFEK 633
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 KTHEGFER 10
+THE FE+
Sbjct: 637 RTHEFFEK 644
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 KTHEGFER 10
+THE FE+
Sbjct: 637 RTHEFFEK 644
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 KTHEGFER 10
+THE FE+
Sbjct: 637 RTHEFFEK 644
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 KTHEGFER 10
+THE FE+
Sbjct: 637 RTHEFFEK 644
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 KTHEGFER 10
+THE FE+
Sbjct: 637 RTHEFFEK 644
>sp|PB2_I69A0|POLYMERASE basic protein 2|Influenza A virus (strain A/England/878/1969
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I68A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I57A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I51A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Albany/12/1951
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I68A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Korea/426/1968
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I57A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Singapore/1/1957
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I57A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I57A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/1957
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I57A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Japan/305/1957
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2S1_I34A1|PB2-S1 A virus (strain A/Puerto
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I60A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Ann
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2S1_I18A0|PB2-S1 A virus (strain A/Brevig
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2S1_I33A0|PB2-S1 A virus (strain A/Wilson-Smith/1933
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I01A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 18 IRVHEGYE 25
>sp|PB2_I01A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 18 IRVHEGYE 25
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 TMKTHEGF 8
T+K+ EGF
Sbjct: 3069 TLKSGEGF 3076
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 TMKTHEGF 8
T+K+ EGF
Sbjct: 3069 TLKSGEGF 3076
>sp|PB2_I02A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 348 IRVHEGYE 355
>sp|PB2_I02A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Guinea
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 346 IRVHEGYE 353
>sp|PB2_I00A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Duck/Hong
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I03A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I78A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Mallard/New
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I01A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I01A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 347 IRVHEGYE 354
>sp|PB2_I77AC|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I59A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I34A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Puerto
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I06A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I03A1|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I02A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I02A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I02A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 353 IRVHEGYE 360
>sp|PB2_I02A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I000F|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Weybridge
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I85A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I80A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I61A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I36A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Henry/1936
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I30A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I18A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Brevig
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I000X|POLYMERASE basic protein 2|Influenza A virus (strain A/X-31
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I93A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I67A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I45A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I43A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Iowa/1943
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I33A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Wilson-Smith/1933
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I02A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I02A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PHOSP_DUVV|PHOSPHOPROTEIN virus (DUVV)
Query: 2 MKTHEGF 8
MKT EGF
Sbjct: 108 MKTGEGF 114
>sp|PB2_I88A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/8/1988
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I73A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/London/1416/1973
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I72A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/101/1972
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I72A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/102/1972
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I72A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Udorn/307/1972
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I83A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I80A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/4/1980
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I79A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Kiev/59/1979
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I77A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I76A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/110/1976
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I75A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Beijing/39/1975
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I73A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Port
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I70A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Qu/7/1970
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I67A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Tokyo/3/1967
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I54A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I75A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Victoria/3/1975
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I71A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/1/1971
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|PB2_I47A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Fort
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IRVHEGYE 361
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 MKTHE 6
MKTHE
Sbjct: 1116 MKTHE 1120
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 MKTHE 6
MKTHE
Sbjct: 1116 MKTHE 1120
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 MKTHE 6
MKTHE
Sbjct: 1116 MKTHE 1120
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 2 MKTHEGF 8
++THEG
Sbjct: 577 LETHEGL 583
>sp|PAP_VZVD|DNA polymerase processivity factor|Varicella-zoster virus (strain
Query: 2 MKTHEGF 8
++TH GF
Sbjct: 262 LETHSGF 268
>sp|PAP_VZVO|DNA polymerase processivity factor|Varicella-zoster virus (strain Oka
Query: 2 MKTHEGF 8
++TH GF
Sbjct: 262 LETHSGF 268
>sp|U20_HHV6Z|GLYCOPROTEIN U20|Human herpesvirus 6B (strain Z29)
Query: 1 TMKTHEGF 8
++K+HE F
Sbjct: 417 SIKSHESF 424
>sp|PB2_I96A2|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 2 MKTHEGFE 9
+ HEG+E
Sbjct: 354 LNVHEGYE 361
>sp|PB2_I96A3|POLYMERASE basic protein 2|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 2 MKTHEGFE 9
+ HEG+E
Sbjct: 354 LNVHEGYE 361
>sp|PB2_I56A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 2 MKTHEGFE 9
++ HEG+E
Sbjct: 354 IQIHEGYE 361
>sp|RIR2_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 MKTHEGF 8
++ HEGF
Sbjct: 7 VRDHEGF 13
>sp|RIR2_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 MKTHEGF 8
++ HEGF
Sbjct: 7 VRDHEGF 13
>sp|RIR2_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 MKTHEGF 8
++ HEGF
Sbjct: 7 VRDHEGF 13
115|SequenceR|580|571|PKRVDTMKTH
>sp|B8_HHV6Z|PROTEIN B8|Human herpesvirus 6B (strain Z29)
Query: 1 PKRVDTMK 8
PKRV T+K
Sbjct: 31 PKRVRTLK 38
Query: 1 PKRVDTMK 8
PKRV T+K
Sbjct: 66 PKRVRTLK 73
Query: 1 PKRVDTMK 8
PKRV T+K
Sbjct: 101 PKRVRTLK 108
116|SequenceR|585|576|TLMVKPKRVD
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 TLMVKPKRV 9
++ VKPKR+
Sbjct: 1094 SVTVKPKRL 1102
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 TLMVKPKRV 9
++ VKPKR+
Sbjct: 1094 SVTVKPKRL 1102
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 2 LMVKPKR 8
LMV+PK+
Sbjct: 337 LMVQPKK 343
>sp|GAG_HTL32|GAG polyprotein|Human T-cell leukemia virus 3
Query: 2 LMVKPKR 8
LMV+PK+
Sbjct: 337 LMVQPKK 343
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 4 VKPKRVD 10
VKP +VD
Sbjct: 3121 VKPTKVD 3127
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 3 MVKPKRV 9
+VKPK+V
Sbjct: 801 IVKPKKV 807
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 MVKPKRV 9
+VKPK+V
Sbjct: 801 IVKPKKV 807
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 2 LMVKPKR 8
LM++PK+
Sbjct: 337 LMIQPKK 343
>sp|PRO_HTL32|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 2 LMVKPKR 8
LMV+PK+
Sbjct: 337 LMVQPKK 343
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 MVKPKRV 9
+VKPK+V
Sbjct: 801 IVKPKKV 807
>sp|GAG_HTL3P|GAG polyprotein|Human T-cell leukemia virus 3
Query: 2 LMVKPKR 8
LM++PK+
Sbjct: 337 LMIQPKK 343
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 4 VKPKRVD 10
VKP +VD
Sbjct: 3209 VKPTKVD 3215
117|SequenceR|590|581|DSLTGTLMVK
>sp|NS1_I96A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 3 LTGTLMVK 10
+TG LMVK
Sbjct: 111 ITGGLMVK 118
>sp|NS1_I82A8|NON-STRUCTURAL protein 1|Influenza A virus (strain
Query: 3 LTGTLMVK 10
+TG LMVK
Sbjct: 111 ITGGLMVK 118
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 DSLTGTL 7
DS+TG+L
Sbjct: 993 DSITGSL 999
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 DSLTGT 6
DS+TGT
Sbjct: 2398 DSVTGT 2403
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 DSLTGT 6
DS+TGT
Sbjct: 2398 DSVTGT 2403
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 DSLTGT 6
DS+TGT
Sbjct: 2404 DSVTGT 2409
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 DSLTGT 6
DS+TGT
Sbjct: 2390 DSVTGT 2395
118|SequenceR|595|586|EAPQRDSLTG
>sp|KTHY_VACCT|THYMIDYLATE kinase|Vaccinia virus (strain Tian Tan)
Query: 3 PQRDSLTG 10
PQR ++TG
Sbjct: 39 PQRSTVTG 46
>sp|KTHY_VACCC|THYMIDYLATE kinase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 PQRDSLTG 10
PQR ++TG
Sbjct: 39 PQRSTVTG 46
>sp|KTHY_VACCA|THYMIDYLATE kinase|Vaccinia virus (strain Ankara) (VACV)
Query: 3 PQRDSLTG 10
PQR ++TG
Sbjct: 39 PQRSTVTG 46
>sp|KTHY_CWPXB|THYMIDYLATE kinase|Cowpox virus (strain Brighton Red)
Query: 3 PQRDSLTG 10
PQR ++TG
Sbjct: 39 PQRSTVTG 46
>sp|KTHY_MONPV|THYMIDYLATE kinase|Monkeypox virus (MPXV)
Query: 3 PQRDSLTG 10
PQR ++TG
Sbjct: 39 PQRSTVTG 46
>sp|KTHY_CWPXG|THYMIDYLATE kinase|Cowpox virus (strain GRI-90 /
Query: 3 PQRDSLTG 10
PQR ++TG
Sbjct: 39 PQRSTVTG 46
>sp|VIF_HV2RO|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 EAPQRDSLT 9
+ PQRDS T
Sbjct: 160 DRPQRDSTT 168
>sp|KTHY_VARV|THYMIDYLATE kinase|Variola virus
Query: 3 PQRDSLTG 10
PQR ++TG
Sbjct: 39 PQRSTVTG 46
>sp|KTHY_VAR67|THYMIDYLATE kinase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 PQRDSLTG 10
PQR ++TG
Sbjct: 39 PQRSTVTG 46
>sp|VP6_ROTH1|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 2 APQRDSL 8
APQ DSL
Sbjct: 110 APQSDSL 116
>sp|VP6_ROTH6|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 2 APQRDSL 8
APQ DSL
Sbjct: 110 APQSDSL 116
>sp|VP6_ROT41|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 2 APQRDSL 8
APQ DSL
Sbjct: 110 APQSDSL 116
>sp|VP6_ROTH7|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United
Query: 2 APQRDSL 8
APQ DSL
Sbjct: 110 APQSDSL 116
>sp|VIF_HV2SB|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 EAPQRDSLT 9
+ PQRD+ T
Sbjct: 160 DKPQRDNTT 168
>sp|VIF_HV2ST|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 3 PQRDSLT 9
PQRD+ T
Sbjct: 162 PQRDNTT 168
>sp|VP6_ROTH3|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 3 PQRDSLTG 10
PQ D+L G
Sbjct: 171 PQHDNLMG 178
>sp|VL2_HPV57|MINOR capsid protein L2|Human papillomavirus 57
Query: 1 EAPQRDSLTG 10
EAPQ +TG
Sbjct: 169 EAPQAGEVTG 178
119|SequenceR|600|591|RFLHLEAPQR
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 1 RFLHLEAPQR 10
+FLH+ P+R
Sbjct: 1215 KFLHMVLPRR 1224
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 1 RFLHLEAPQR 10
+FLH+ P+R
Sbjct: 1215 KFLHMVLPRR 1224
>sp|VE2_HPV52|REGULATORY protein E2|Human papillomavirus 52
Query: 4 HLEAPQR 10
HL+ PQ+
Sbjct: 231 HLQPPQK 237
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 RFLHLEA 7
RF+HL A
Sbjct: 912 RFIHLHA 918
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 1 RFLHLEAPQ 9
R LH EAP
Sbjct: 10 RRLHAEAPD 18
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 1 RFLHLEAPQ 9
R LH EAP
Sbjct: 10 RRLHAEAPD 18
120|SequenceR|605|596|PADYNRFLHL
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 DYNRFLHL 10
DYN+FL L
Sbjct: 1166 DYNQFLIL 1173
Query: 3 DYNRFLHL 10
DYN HL
Sbjct: 1415 DYNGIYHL 1422
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 3 DYNRFLHL 10
DYN+FL L
Sbjct: 1166 DYNQFLIL 1173
Query: 3 DYNRFLHL 10
DYN HL
Sbjct: 1415 DYNGIYHL 1422
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 3 DYNRFL 8
DYN+FL
Sbjct: 250 DYNQFL 255
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 PADYNRFLH 9
P D +R LH
Sbjct: 1644 PDDASRLLH 1652
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 4 YNRFLHL 10
YNR+L L
Sbjct: 3224 YNRYLSL 3230
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 4 YNRFLHL 10
YNR+L L
Sbjct: 3274 YNRYLSL 3280
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 4 YNRFLHL 10
YNR+L L
Sbjct: 3244 YNRYLSL 3250
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 PADYNRFLH 9
P D +R LH
Sbjct: 1644 PDDASRLLH 1652
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 YNRFLHL 10
YNR+L L
Sbjct: 3224 YNRYLSL 3230
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 YNRFLHL 10
YNR+L L
Sbjct: 3244 YNRYLSL 3250
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 YNRFLHL 10
YNR+L L
Sbjct: 3274 YNRYLSL 3280
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 YNRFLHL 10
YNR+L L
Sbjct: 3204 YNRYLAL 3210
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 YNRFLHL 10
YNR+L L
Sbjct: 3181 YNRYLAL 3187
>sp|ORF4_HHV8P|COMPLEMENT control protein|Human herpesvirus 8 type P
Query: 1 PADYNRFL 8
PA NR+L
Sbjct: 515 PASKNRYL 522
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 YNRFLHL 10
YNR+L L
Sbjct: 3204 YNRYLAL 3210
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 YNRFLHL 10
YNR+L L
Sbjct: 3181 YNRYLAL 3187
>sp|UNG_HCMVM|URACIL-DNA glycosylase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 ADYNRFLHL 10
AD+ RFL L
Sbjct: 32 ADWIRFLSL 40
>sp|UNG_HCMVA|URACIL-DNA glycosylase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 ADYNRFLHL 10
AD+ RFL L
Sbjct: 32 ADWIRFLSL 40
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 3 DYNRFLHL 10
+YN+FL +
Sbjct: 2173 EYNKFLAM 2180
>sp|PG034_VACCC|PROTEIN OPG034|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PADYNRFL 8
P YNRF
Sbjct: 174 PIPYNRFF 181
>sp|VP4_ROTYO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 PADYNRFLHL 10
P D N+F L
Sbjct: 701 PFDVNKFAEL 710
>sp|VP4_ROTHK|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 PADYNRFLHL 10
P D N+F L
Sbjct: 701 PFDVNKFAEL 710
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 3 DYNRFL 8
+YN+FL
Sbjct: 2173 EYNKFL 2178
>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 PADYNRFLHL 10
P D N+F L
Sbjct: 701 PFDVNKFAEL 710
>sp|VP4_ROTHP|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 PADYNRFLHL 10
P D N+F L
Sbjct: 701 PFDVNKFTEL 710
>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 PADYNRFLHL 10
P D N+F L
Sbjct: 701 PFDINKFAEL 710
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 3 DYNRFL 8
+YN+FL
Sbjct: 2181 EYNKFL 2186
>sp|VP4_ROTHL|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 PADYNRFLHL 10
P D N+F L
Sbjct: 701 PFDINKFAEL 710
>sp|VP4_ROTH5|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 PADYNRFLHL 10
P D N+F L
Sbjct: 701 PFDINKFAEL 710
>sp|VP4_ROTWI|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 1 PADYNRFLHL 10
P D N+F L
Sbjct: 701 PFDVNKFAEL 710
>sp|VP4_ROTHO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 PADYNRFLHL 10
P D N+F L
Sbjct: 701 PFDVNKFAEL 710
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 3 DYNRFL 8
+YN+FL
Sbjct: 2173 EYNKFL 2178
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 3 DYNRFL 8
+YN+FL
Sbjct: 2172 EYNKFL 2177
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 3 DYNRFL 8
+YN+FL
Sbjct: 2174 EYNKFL 2179
>sp|VP4_ROTHV|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 PADYNRFLHL 10
P D N+F L
Sbjct: 701 PFDVNKFAEL 710
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 PADYNRFLH 9
PAD + F H
Sbjct: 1169 PADLHSFTH 1177
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 3 DYNRFL 8
+YN+FL
Sbjct: 2176 EYNKFL 2181
>sp|PG034_MONPV|PROTEIN OPG034|Monkeypox virus (MPXV)
Query: 1 PADYNRFL 8
P YNRF
Sbjct: 164 PIPYNRFF 171
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 3 DYNRFL 8
+YN+FL
Sbjct: 2176 EYNKFL 2181
>sp|PG034_VAR67|PROTEIN OPG034|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 PADYNRFL 8
P YNRF
Sbjct: 164 PIPYNRFF 171
>sp|VP4_ROTHW|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 PADYNRFLHL 10
P D N+F L
Sbjct: 701 PFDVNKFAEL 710
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 5 NRFLHL 10
N FLHL
Sbjct: 173 NTFLHL 178
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 5 NRFLHL 10
N FLHL
Sbjct: 173 NTFLHL 178
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 5 NRFLHL 10
N FLHL
Sbjct: 173 NTFLHL 178
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 2 ADYNRFL 8
A+YN FL
Sbjct: 272 AEYNNFL 278
121|SequenceR|610|601|ERVTEPADYN
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 VTEPADYN 10
V EP DYN
Sbjct: 5387 VMEPVDYN 5394
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 VTEPADYN 10
V EP DYN
Sbjct: 5412 VMEPIDYN 5419
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 4 TEPADY 9
T+PADY
Sbjct: 868 TDPADY 873
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 1 ERVTEPADYN 10
+RV +PAD N
Sbjct: 296 DRVGDPADEN 305
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 1 ERVTEPADYN 10
+RV +PAD N
Sbjct: 296 DRVGDPADEN 305
>sp|UL10_HCMVM|UNCHARACTERIZED protein UL10|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 RVTEPADYN 10
R T P DYN
Sbjct: 174 RRTSPKDYN 182
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 1 ERVTEPADYN 10
+RV +PAD N
Sbjct: 296 DRVGDPADEN 305
>sp|UL10_HCMVA|UNCHARACTERIZED protein UL10|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RVTEPADYN 10
R T P DYN
Sbjct: 175 RRTSPRDYN 183
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 2 RVTEPADY 9
R+TEP +
Sbjct: 1876 RITEPVSF 1883
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 2 RVTEPADY 9
R+TEP +
Sbjct: 1876 RITEPVSF 1883
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 VTEPADY 9
V EP DY
Sbjct: 1800 VEEPEDY 1806
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 VTEPADY 9
V EP DY
Sbjct: 1800 VEEPEDY 1806
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 VTEPADY 9
V EP DY
Sbjct: 1634 VEEPEDY 1640
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 VTEPADY 9
V EP DY
Sbjct: 1800 VEEPEDY 1806
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 VTEPADY 9
V EP DY
Sbjct: 1800 VEEPEDY 1806
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 VTEPADY 9
V EP DY
Sbjct: 1800 VEEPEDY 1806
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 VTEPADY 9
V EP DY
Sbjct: 1801 VDEPEDY 1807
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 3 VTEPADY 9
VT P DY
Sbjct: 363 VTPPVDY 369
122|SequenceR|615|606|QNFRPERVTE
>sp|CVC2_HHV7J|CAPSID vertex component 2|Human herpesvirus 7 (strain JI)
Query: 1 QNFRPERV 8
+NFRPE +
Sbjct: 130 ENFRPEMI 137
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 NFRPERVTE 10
NF P+ VTE
Sbjct: 834 NFEPKPVTE 842
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 3 FRPERVTE 10
RP+R+TE
Sbjct: 708 LRPQRLTE 715
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 2 NFRPERVTE 10
NF P VTE
Sbjct: 832 NFEPTGVTE 840
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 3 FRPERVTE 10
RP+R+TE
Sbjct: 708 LRPQRLTE 715
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 3 FRPERVTE 10
RP+R+TE
Sbjct: 708 LRPQRLTE 715
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 3 FRPERVTE 10
RP+R+TE
Sbjct: 706 LRPQRLTE 713
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 3 FRPERVTE 10
RP+R+TE
Sbjct: 708 LRPQRLTE 715
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 3 FRPERVTE 10
RP+R+TE
Sbjct: 708 LRPQRLTE 715
>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human
Query: 1 QNFRPER 7
+N+RPER
Sbjct: 618 KNWRPER 624
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 1 QNFRPER 7
+N+RPER
Sbjct: 614 KNWRPER 620
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 NFRPERVTE 10
NFR +RV +
Sbjct: 1892 NFRADRVID 1900
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 NFRPERVTE 10
NFR +RV +
Sbjct: 1891 NFRADRVID 1899
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 NFRPERVTE 10
NFR +RV +
Sbjct: 1892 NFRADRVID 1900
>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 1 QNFRPER 7
+N+RPER
Sbjct: 615 KNWRPER 621
>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human
Query: 1 QNFRPER 7
+N+RPER
Sbjct: 617 KNWRPER 623
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 NFRPERVTE 10
NF+ ERV +
Sbjct: 1481 NFKAERVID 1489
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 1 QNFRPERV 8
+N RPE V
Sbjct: 951 RNLRPESV 958
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 NFRPERVTE 10
NF+ ERV +
Sbjct: 1891 NFKAERVID 1899
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 NFRPERVTE 10
NF+ ERV +
Sbjct: 1891 NFKAERVID 1899
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 NFRPERVTE 10
NF+ ERV +
Sbjct: 1891 NFKAERVID 1899
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 NFRPERVTE 10
NF+ ERV +
Sbjct: 1891 NFKAERVID 1899
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 NFRPERVTE 10
NF+ ERV +
Sbjct: 1891 NFKAERVID 1899
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 NFRPERVTE 10
NF+ ERV +
Sbjct: 1891 NFKAERVID 1899
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 NFRPERVTE 10
NF+ ERV +
Sbjct: 1891 NFKAERVID 1899
>sp|NCAP_TOSV|NUCLEOPROTEIN virus (Tos)
Query: 1 QNFRPERVTE 10
Q F P+R+ +
Sbjct: 33 QGFDPKRIVQ 42
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 2 NFRPERVTE 10
NF P VT+
Sbjct: 834 NFTPTNVTD 842
123|SequenceR|620|611|RLNVNQNFRP
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 RLNVNQNFRP 10
+LNV FRP
Sbjct: 1340 KLNVAAAFRP 1349
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 RLNVNQNFRP 10
+LNV++ F+P
Sbjct: 1347 KLNVSKAFQP 1356
>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 RLNVNQNFR 9
+LNV +N R
Sbjct: 436 KLNVEENMR 444
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 RLNVNQNFR 9
+LN N+ FR
Sbjct: 1614 KLNRNEKFR 1622
>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 RLNVNQNFR 9
+LNV +N R
Sbjct: 436 KLNVEENMR 444
>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 RLNVNQNFR 9
+LNV +N R
Sbjct: 436 KLNVEENMR 444
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 RLNVNQNFR 9
+LN N+ FR
Sbjct: 1624 KLNRNEKFR 1632
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 RLNVNQNFR 9
+LN N+ FR
Sbjct: 1625 KLNRNEKFR 1633
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 RLNVNQNFR 9
+LN N+ FR
Sbjct: 1624 KLNRNEKFR 1632
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 RLNVNQNFR 9
+LN N+ FR
Sbjct: 1616 KLNRNEKFR 1624
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 RLNVNQNFR 9
+LN N+ FR
Sbjct: 1618 KLNRNEKFR 1626
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 RLNVNQNFR 9
+LN N+ FR
Sbjct: 1632 KLNRNEKFR 1640
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 RLNVNQNFR 9
+LN N+ FR
Sbjct: 1634 KLNRNEKFR 1642
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 RLNVNQNFR 9
+LN N+ FR
Sbjct: 1622 KLNRNEKFR 1630
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 RLNVNQNFR 9
+LN N+ FR
Sbjct: 1616 KLNRNEKFR 1624
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 RLNVNQNFR 9
+LN N+ FR
Sbjct: 1627 KLNRNEKFR 1635
>sp|VE2_HPV16|REGULATORY protein E2|Human papillomavirus type 16
Query: 1 RLNVNQNFRP 10
R+N N N P
Sbjct: 278 RINCNSNTTP 287
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 RLNVNQNFR 9
+LN N+ FR
Sbjct: 1626 KLNRNEKFR 1634
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 RLNVNQNFR 9
+LN N+ FR
Sbjct: 1615 KLNRNEKFR 1623
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 RLNVNQNFR 9
+LN N+ FR
Sbjct: 1615 KLNRNEKFR 1623
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 RLNVNQNFR 9
+LN N+ FR
Sbjct: 1613 KLNRNEKFR 1621
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 1 RLNVNQNFRP 10
+ +NQ++RP
Sbjct: 288 KAGINQSWRP 297
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 1 RLNVNQNFRP 10
+L QN RP
Sbjct: 647 KLRAGQNHRP 656
>sp|VE8E2_HPV16|PROTEIN E8^E2C|Human papillomavirus type 16
Query: 1 RLNVNQNFRP 10
R+N N N P
Sbjct: 90 RINCNSNTTP 99
>sp|POLG_ECHO9|GENOME polyprotein|Echo 9 virus (EV-9) (Coxsackievirus
Query: 1 RLNVNQNFR 9
+LN N+ FR
Sbjct: 98 KLNRNEKFR 106
124|SequenceR|625|616|PQAPPRLNVN
>sp|PG085_YLDV|PROBABLE metalloendopeptidase G1-type|Yaba-like disease virus (YLDV)
Query: 5 PRLNVN 10
P+LNVN
Sbjct: 373 PKLNVN 378
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 PQAPPRLN 8
PQ PP L+
Sbjct: 2421 PQGPPNLD 2428
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 3 APPRLNV 9
APPR++V
Sbjct: 744 APPRMSV 750
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 3 APPRLNV 9
APPR++V
Sbjct: 743 APPRMSV 749
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 PQAPPRLN 8
P APP L+
Sbjct: 1706 PSAPPILS 1713
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 3 APPRLNV 9
APPR+++
Sbjct: 745 APPRMSI 751
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 3 APPRLNV 9
APPR+++
Sbjct: 745 APPRMSI 751
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 APPRLNV 9
APPR+++
Sbjct: 746 APPRMSI 752
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 APPRLNV 9
APPR+++
Sbjct: 746 APPRMSI 752
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 3 APPRLNV 9
APPR+++
Sbjct: 745 APPRMSI 751
>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 QAPPRLNVN 10
++PPR NVN
Sbjct: 223 KSPPRGNVN 231
>sp|PKG2_ADE02|PACKAGING protein 2|Human adenovirus C serotype 2
Query: 1 PQAPPRLNV 9
PQAPP L V
Sbjct: 82 PQAPPALPV 90
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 3 APPRLNV 9
APPR+++
Sbjct: 746 APPRMSI 752
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 3 APPRLNV 9
APPR+++
Sbjct: 746 APPRMSI 752
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 APPRLNV 9
APPR+++
Sbjct: 749 APPRMSI 755
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 3 APPRLNV 9
APPR+++
Sbjct: 766 APPRMSI 772
>sp|PKG2_ADE05|PACKAGING protein 2|Human adenovirus C serotype 5
Query: 1 PQAPPRLNV 9
PQAPP L V
Sbjct: 83 PQAPPALPV 91
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 3 APPRLNV 9
APPR+++
Sbjct: 744 APPRMSI 750
>sp|SF33K_ADE02|PROTEIN 33K|Human adenovirus C serotype 2
Query: 1 PQAPPRLNV 9
PQAPP L V
Sbjct: 82 PQAPPALPV 90
>sp|SF33K_ADE05|PROTEIN 33K|Human adenovirus C serotype 5
Query: 1 PQAPPRLNV 9
PQAPP L V
Sbjct: 83 PQAPPALPV 91
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 APPRLNV 9
APPR+++
Sbjct: 744 APPRMSI 750
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 PQAPPRLNVN 10
PQ PP L+
Sbjct: 2421 PQGPPNLDTT 2430
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 APPRLNV 9
APPR+++
Sbjct: 744 APPRISI 750
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 3 APPRLNV 9
APPR+++
Sbjct: 772 APPRISI 778
>sp|V_HENDH|NON-STRUCTURAL protein V|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 QAPPRLNVN 10
++PPR NVN
Sbjct: 223 KSPPRGNVN 231
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 4 PPRLNV 9
PP LNV
Sbjct: 632 PPTLNV 637
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 1 PQAPP 5
PQ+PP
Sbjct: 798 PQSPP 802
>sp|W_HENDH|PROTEIN W|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 QAPPRLNVN 10
++PPR NVN
Sbjct: 223 KSPPRGNVN 231
>sp|AN_HHV2|ALKALINE nuclease|Human herpesvirus 2 (HHV-2) (Human
Query: 1 PQAPPR 6
PQ+PPR
Sbjct: 57 PQSPPR 62
125|SequenceR|630|621|VLQDSPQAPP
>sp|VE2_HPV57|REGULATORY protein E2|Human papillomavirus 57
Query: 2 LQDSPQAP 9
LQDS QAP
Sbjct: 239 LQDSAQAP 246
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 VLQDSPQAPP 10
VL D P PP
Sbjct: 1478 VLWDVPSPPP 1487
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 VLQDSPQAPP 10
VL D P PP
Sbjct: 1478 VLWDVPSPPP 1487
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 VLQDSPQAPP 10
VL D P PP
Sbjct: 1478 VLWDVPSPPP 1487
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 VLQDSPQAPP 10
VL D P PP
Sbjct: 1478 VLWDVPSPPP 1487
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 VLQDSPQAPP 10
VL D P PP
Sbjct: 1478 VLWDVPSPPP 1487
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 VLQDSPQAPP 10
VL D P PP
Sbjct: 1478 VLWDVPSPPP 1487
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 VLQDSPQAPP 10
VL D P PP
Sbjct: 1478 VLWDVPSPPP 1487
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 VLQDSP 6
VLQDSP
Sbjct: 1021 VLQDSP 1026
>sp|VE8E2_HPV57|PROTEIN E8^E2C|Human papillomavirus 57
Query: 2 LQDSPQAP 9
LQDS QAP
Sbjct: 48 LQDSAQAP 55
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 VLQDSPQAPP 10
VL D P PP
Sbjct: 1068 VLWDVPSPPP 1077
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 5 SPQAPP 10
SP APP
Sbjct: 1705 SPSAPP 1710
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 2 LQDSPQAP 9
LQDSP P
Sbjct: 331 LQDSPMNP 338
>sp|VP2_ROTHC|INNER capsid protein VP2|Rotavirus C (isolate RVC/Human/United
Query: 4 DSPQAPP 10
D+P+ PP
Sbjct: 657 DAPKIPP 663
>sp|PKG1_ADE02|PACKAGING protein 1|Human adenovirus C serotype 2
Query: 3 QDSPQAPP 10
QD PQA P
Sbjct: 15 QDQPQAHP 22
>sp|PKG1_ADE05|PACKAGING protein 1|Human adenovirus C serotype 5
Query: 3 QDSPQAPP 10
QD PQA P
Sbjct: 15 QDQPQAHP 22
>sp|VSGP_EBOSU|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 QDSPQAPP 10
++SP PP
Sbjct: 329 EESPTGPP 336
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 3 QDSPQAP 9
QD+PQ P
Sbjct: 1740 QDTPQEP 1746
>sp|VSGP_EBOSM|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 3 QDSPQAPP 10
++SP PP
Sbjct: 329 EESPTGPP 336
>sp|VSGP_EBOSB|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 3 QDSPQAPP 10
++SP PP
Sbjct: 329 EESPTGPP 336
>sp|GAG_HV1MV|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 QDSPQAPP 10
Q SP APP
Sbjct: 457 QVSPSAPP 464
>sp|VP16_HHV2H|TEGUMENT protein VP16|Human herpesvirus 2 (strain HG52)
Query: 3 QDSPQAPP 10
+++P APP
Sbjct: 27 KNTPAAPP 34
>sp|VP16_HHV23|TEGUMENT protein VP16|Human herpesvirus 2 (strain 333)
Query: 3 QDSPQAPP 10
+++P APP
Sbjct: 27 KNTPAAPP 34
>sp|75K_PAVHV|UNCHARACTERIZED protein 7.5K|Human parvovirus B19 (strain HV)
Query: 2 LQDSPQAP 9
L SPQAP
Sbjct: 37 LTSSPQAP 44
126|SequenceR|635|626|RAARWVLQDS
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 2 AARWVLQD 9
AAR VLQD
Sbjct: 744 AARGVLQD 751
>sp|VE2_HPV16|REGULATORY protein E2|Human papillomavirus type 16
Query: 4 RWVLQD 9
+W LQD
Sbjct: 91 KWTLQD 96
>sp|VE2_HPV55|REGULATORY protein E2|Human papillomavirus type 55
Query: 5 WVLQDS 10
W LQD+
Sbjct: 92 WTLQDT 97
>sp|VE2_HPV11|REGULATORY protein E2|Human papillomavirus 11
Query: 5 WVLQDS 10
W LQD+
Sbjct: 92 WTLQDT 97
>sp|VE2_HPV45|REGULATORY protein E2|Human papillomavirus 45
Query: 5 WVLQDS 10
W LQD+
Sbjct: 98 WTLQDT 103
>sp|VE2_HPV13|REGULATORY protein E2|Human papillomavirus 13
Query: 5 WVLQDS 10
W LQD+
Sbjct: 92 WTLQDT 97
>sp|VE2_HPV18|REGULATORY protein E2|Human papillomavirus type 18
Query: 5 WVLQDS 10
W LQD+
Sbjct: 96 WTLQDT 101
>sp|VE2_HPV40|REGULATORY protein E2|Human papillomavirus 40
Query: 5 WVLQDS 10
W LQD+
Sbjct: 92 WTLQDT 97
127|SequenceR|640|631|AAGSSRAARW
***** No hits found ******
128|SequenceR|645|636|RFYTPAAGSS
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 2 FYTPAAGS 9
FYTP AG+
Sbjct: 848 FYTPPAGT 855
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 2 FYTPAAGS 9
FYTP AG+
Sbjct: 919 FYTPPAGT 926
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 RFYTPAAG 8
RF++PA G
Sbjct: 1736 RFHSPAVG 1743
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 RFYTPAAG 8
RF++PA G
Sbjct: 1736 RFHSPAVG 1743
>sp|NPH2_MONPV|RNA helicase NPH-II|Monkeypox virus (MPXV)
Query: 1 RFYTPAAGSS 10
+ YTP GSS
Sbjct: 386 QMYTPPDGSS 395
>sp|NPH2_VARV|RNA helicase NPH-II|Variola virus
Query: 1 RFYTPAAGSS 10
+ YTP GSS
Sbjct: 386 QMYTPPDGSS 395
>sp|NPH2_VAR67|RNA helicase NPH-II|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 RFYTPAAGSS 10
+ YTP GSS
Sbjct: 386 QMYTPPDGSS 395
>sp|NPH2_VACCT|RNA helicase NPH-II|Vaccinia virus (strain Tian Tan)
Query: 1 RFYTPAAGSS 10
+ YTP GSS
Sbjct: 386 QMYTPPDGSS 395
>sp|NPH2_VACCA|RNA helicase NPH-II|Vaccinia virus (strain Ankara) (VACV)
Query: 1 RFYTPAAGSS 10
+ YTP GSS
Sbjct: 386 QMYTPPDGSS 395
>sp|NPH2_VACCC|RNA helicase NPH-II|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 RFYTPAAGSS 10
+ YTP GSS
Sbjct: 386 QMYTPPDGSS 395
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 3 YTPAAGSS 10
YTP GSS
Sbjct: 452 YTPPGGSS 459
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 FYTPAAGSS 10
+ TPA GS+
Sbjct: 2822 YRTPATGSA 2830
>sp|HBSAG_HBVH3|LARGE envelope protein|Hepatitis B virus genotype H
Query: 2 FYTPAAGSS 10
Y PA GSS
Sbjct: 139 LYLPAGGSS 147
>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)
Query: 2 FYTPAA 7
FYTP A
Sbjct: 572 FYTPLA 577
>sp|HBSAG_HBVB7|LARGE envelope protein|Hepatitis B virus genotype B1
Query: 2 FYTPAAGSS 10
Y PA GSS
Sbjct: 139 LYLPAGGSS 147
>sp|HBSAG_HBVB6|LARGE envelope protein|Hepatitis B virus genotype B2
Query: 2 FYTPAAGSS 10
Y PA GSS
Sbjct: 139 LYLPAGGSS 147
>sp|HBSAG_HBVA2|LARGE envelope protein|Hepatitis B virus genotype A2
Query: 2 FYTPAAGSS 10
Y PA GSS
Sbjct: 128 LYLPAGGSS 136
>sp|HBSAG_HBVB8|LARGE envelope protein|Hepatitis B virus genotype B1
Query: 2 FYTPAAGSS 10
Y PA GSS
Sbjct: 139 LYLPAGGSS 147
>sp|NEC2_HHV6U|NUCLEAR egress protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 TPAAGS 9
TPA+GS
Sbjct: 269 TPASGS 274
>sp|HBSAG_HBVD2|LARGE envelope protein|Hepatitis B virus genotype D
Query: 2 FYTPAAGSS 10
Y PA GSS
Sbjct: 128 LYLPAGGSS 136
>sp|HBSAG_HBVA3|LARGE envelope protein|Hepatitis B virus genotype A2
Query: 2 FYTPAAGSS 10
Y PA GSS
Sbjct: 139 LYLPAGGSS 147
>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)
Query: 2 FYTPAA 7
FYTP A
Sbjct: 572 FYTPLA 577
>sp|HBSAG_HBVA7|LARGE envelope protein|Hepatitis B virus genotype A2
Query: 2 FYTPAAGSS 10
Y PA GSS
Sbjct: 139 LYLPAGGSS 147
>sp|HBSAG_HBVD5|LARGE envelope protein|Hepatitis B virus genotype D
Query: 2 FYTPAAGSS 10
Y PA GSS
Sbjct: 128 LYLPAGGSS 136
>sp|ORF23_TTVV7|PROBABLE protein VP2|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 2 FYTPAAGS 9
FY+PAA +
Sbjct: 194 FYSPAANA 201
>sp|US8A_HHV1F|US8.5 protein|Human herpesvirus 1 (strain F)
Query: 1 RFYTPAA 7
R YTP A
Sbjct: 13 RLYTPVA 19
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 2 FYTPAA 7
FY PAA
Sbjct: 160 FYVPAA 165
>sp|US8A_HHV11|PROTEIN US8.5|Human herpesvirus 1 (strain 17)
Query: 1 RFYTPAA 7
R YTP A
Sbjct: 13 RLYTPVA 19
>sp|US03_HHV11|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 1 (strain 17)
Query: 2 FYTPA 6
FYTPA
Sbjct: 36 FYTPA 40
>sp|HBSAG_HBVF4|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 2 FYTPAAGSS 10
Y PA GSS
Sbjct: 139 LYFPAGGSS 147
>sp|HBSAG_HBVF1|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 2 FYTPAAGSS 10
Y PA GSS
Sbjct: 139 LYFPAGGSS 147
>sp|VL1_HPV24|MAJOR capsid protein L1|Human papillomavirus 24
Query: 2 FYTPAA 7
FY PAA
Sbjct: 287 FYIPAA 292
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RFYTPAA 7
+FY+P A
Sbjct: 1257 KFYSPCA 1263
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RFYTPAA 7
+FY+P A
Sbjct: 1257 KFYSPCA 1263
>sp|HBSAG_HBVF6|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 2 FYTPAAGSS 10
Y PA GSS
Sbjct: 139 LYFPAGGSS 147
>sp|US03_HHV2H|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 2 (strain HG52)
Query: 2 FYTPA 6
FYTPA
Sbjct: 36 FYTPA 40
>sp|HBSAG_HBVH2|LARGE envelope protein|Hepatitis B virus genotype H
Query: 2 FYTPAAGSS 10
Y PA GSS
Sbjct: 139 LYFPAGGSS 147
>sp|HBSAG_HBVH1|LARGE envelope protein|Hepatitis B virus genotype H
Query: 2 FYTPAAGSS 10
Y PA GSS
Sbjct: 139 LYFPAGGSS 147
>sp|HBSAG_HBVB3|LARGE envelope protein|Hepatitis B virus genotype B2
Query: 2 FYTPAAGSS 10
Y PA GSS
Sbjct: 139 LYFPAGGSS 147
>sp|HBSAG_HBVF3|LARGE envelope protein|Hepatitis B virus genotype F1
Query: 2 FYTPAAGSS 10
Y PA GSS
Sbjct: 139 LYFPAGGSS 147
>sp|HBSAG_HBVB5|LARGE envelope protein|Hepatitis B virus genotype B2
Query: 2 FYTPAAGSS 10
Y PA GSS
Sbjct: 139 LYFPAGGSS 147
>sp|HBSAG_HBVB4|LARGE envelope protein|Hepatitis B virus genotype B/C
Query: 2 FYTPAAGSS 10
Y PA GSS
Sbjct: 128 LYFPAGGSS 136
>sp|HBSAG_HBVB1|LARGE envelope protein|Hepatitis B virus genotype B1
Query: 2 FYTPAAGSS 10
Y PA GSS
Sbjct: 128 LYFPAGGSS 136
>sp|VL1_HPV22|MAJOR capsid protein L1|Human papillomavirus 22
Query: 1 RFYTPAAGSS 10
++Y PAA +
Sbjct: 281 KYYLPAASQT 290
>sp|HBSAG_HBVD7|LARGE envelope protein|Hepatitis B virus genotype D
Query: 2 FYTPAAGSS 10
Y PA GSS
Sbjct: 128 LYFPAGGSS 136
>sp|HBSAG_HBVD6|LARGE envelope protein|Hepatitis B virus genotype D
Query: 2 FYTPAAGSS 10
Y PA GSS
Sbjct: 128 LYFPAGGSS 136
>sp|HBSAG_HBVA6|LARGE envelope protein|Hepatitis B virus genotype A1
Query: 2 FYTPAAGSS 10
Y PA GSS
Sbjct: 128 LYFPAGGSS 136
>sp|HBSAG_HBVE4|LARGE envelope protein|Hepatitis B virus genotype E
Query: 2 FYTPAAGSS 10
Y PA GSS
Sbjct: 138 LYFPAGGSS 146
>sp|HBSAG_HBVE1|LARGE envelope protein|Hepatitis B virus genotype E
Query: 2 FYTPAAGSS 10
Y PA GSS
Sbjct: 138 LYFPAGGSS 146
>sp|HBSAG_HBVE2|LARGE envelope protein|Hepatitis B virus genotype E
Query: 2 FYTPAAGSS 10
Y PA GSS
Sbjct: 138 LYFPAGGSS 146
>sp|HBSAG_HBVA9|LARGE envelope protein|Hepatitis B virus genotype A3
Query: 2 FYTPAAGSS 10
Y PA GSS
Sbjct: 139 LYFPAGGSS 147
129|SequenceR|650|641|FRGNPRFYTP
>sp|VU26_HHV6U|PROTEIN U26|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 RGNPRFYTP 10
R +PRFY P
Sbjct: 52 RFDPRFYKP 60
>sp|VU26_HHV6G|PROTEIN U26|Human herpesvirus 6A (strain GS)
Query: 2 RGNPRFYTP 10
R +PRFY P
Sbjct: 52 RFDPRFYKP 60
>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)
Query: 1 FRGNPR 6
F+GNPR
Sbjct: 216 FKGNPR 221
>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann
Query: 1 FRGNPR 6
F+GNPR
Sbjct: 216 FKGNPR 221
>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 FRGNPR 6
F+GNPR
Sbjct: 216 FKGNPR 221
>sp|VU26_HHV6Z|PROTEIN U26|Human herpesvirus 6B (strain Z29)
Query: 4 NPRFYTP 10
+PRFY P
Sbjct: 54 DPRFYKP 60
>sp|VU26_HHV6H|PROTEIN U26|Human herpesvirus 6B (HHV-6 variant
Query: 4 NPRFYTP 10
+PRFY P
Sbjct: 54 DPRFYKP 60
>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)
Query: 2 RGNPRFYT 9
R NP FYT
Sbjct: 502 RTNPTFYT 509
>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain
Query: 2 RGNPRFYT 9
R NP FYT
Sbjct: 502 RTNPTFYT 509
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 4 NPRFYTP 10
NP F TP
Sbjct: 3302 NPGFLTP 3308
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 NPRFYTP 10
NP F TP
Sbjct: 3302 NPGFLTP 3308
>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain
Query: 2 RGNPRFYT 9
R NP FYT
Sbjct: 507 RRNPTFYT 514
>sp|HEMA_I57A5|HEMAGGLUTININ A virus (strain A/Singapore/1/1957
Query: 3 GNPRFY 8
GNP F+
Sbjct: 153 GNPSFF 158
>sp|HEMA_I57A0|HEMAGGLUTININ A virus (strain A/Japan/305/1957
Query: 3 GNPRFY 8
GNP F+
Sbjct: 153 GNPSFF 158
>sp|HEMA_I78A3|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 3 GNPRFY 8
GNP F+
Sbjct: 153 GNPSFF 158
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 2 RGNPRF 7
RG PRF
Sbjct: 328 RGTPRF 333
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 4 NPRFYTP 10
NP+ Y+P
Sbjct: 1232 NPKSYSP 1238
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 NPRFYTP 10
NP+ Y+P
Sbjct: 1232 NPKTYSP 1238
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 4 NPRFYTP 10
NP+ Y+P
Sbjct: 1232 NPKTYSP 1238
>sp|HEMA_I60A0|HEMAGGLUTININ A virus (strain A/Ann
Query: 3 GNPRFY 8
GNP F+
Sbjct: 153 GNPSFF 158
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 NPRFYTP 10
+PR +TP
Sbjct: 461 HPRLHTP 467
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 NPRFYTP 10
+PR +TP
Sbjct: 461 HPRLHTP 467
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 NPRFYTP 10
+PR +TP
Sbjct: 461 HPRLHTP 467
>sp|IR14_HCMVA|UNCHARACTERIZED protein IRL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RGNPRFYTP 10
R +PR+Y P
Sbjct: 78 RTSPRYYPP 86
>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United
Query: 4 NPRFYTP 10
NP + TP
Sbjct: 489 NPNYQTP 495
130|SequenceR|655|646|LGGDLFRGNP
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 2 GGDLFRGNP 10
GG L GNP
Sbjct: 655 GGQLVLGNP 663
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 2 GGDLFRGNP 10
GG L GNP
Sbjct: 655 GGQLVLGNP 663
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 LGGDLFRGNP 10
L G+LF G+P
Sbjct: 2510 LSGELFPGHP 2519
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 LGGDLFRGNP 10
L G+LF G+P
Sbjct: 2483 LTGELFPGHP 2492
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 3 GDLFRGNP 10
GD+ RG P
Sbjct: 999 GDILRGLP 1006
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 4 DLFRGNP 10
D FR NP
Sbjct: 2098 DTFRDNP 2104
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 1 LGGDLFRGNP 10
+ GD+ RG P
Sbjct: 83 IDGDVVRGRP 92
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 GDLFRGNP 10
GD+ RG P
Sbjct: 994 GDIIRGLP 1001
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 3 GDLFRGN 9
GDLFR +
Sbjct: 633 GDLFRSS 639
>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)
Query: 3 GDLFRGN 9
GD+F+G+
Sbjct: 155 GDVFKGD 161
>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 GDLFRGN 9
GD+F+G+
Sbjct: 155 GDVFKGD 161
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 LGGDLFR 7
+GG LFR
Sbjct: 143 VGGKLFR 149
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 LGGDLFR 7
+GG LFR
Sbjct: 143 VGGKLFR 149
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 LGGDLFR 7
+GG LFR
Sbjct: 142 VGGKLFR 148
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 LGGDLFR 7
+GG LFR
Sbjct: 142 VGGKLFR 148
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 LGGDLFR 7
+GG LFR
Sbjct: 143 VGGKLFR 149
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 LGGDLFR 7
+GG LFR
Sbjct: 143 VGGKLFR 149
>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)
Query: 2 GGDLFRGN 9
G DL+R N
Sbjct: 440 GMDLYRSN 447
>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human
Query: 5 LFRGN 9
LFRGN
Sbjct: 514 LFRGN 518
131|SequenceR|660|651|PNNALLGGDL
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 PNNALLGGDL 10
P N+LL GD+
Sbjct: 1993 PFNSLLCGDI 2002
Query: 1 PNNALLGGDL 10
P N + GD+
Sbjct: 2187 PGNTFINGDI 2196
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 PNNALLGGDL 10
P N+LL GD+
Sbjct: 1993 PFNSLLCGDI 2002
Query: 1 PNNALLGGDL 10
P N + GD+
Sbjct: 2187 PGNTFINGDI 2196
>sp|PG125_MONPV|SCAFFOLD protein OPG125|Monkeypox virus (MPXV)
Query: 3 NALLGGD 9
N+L+GGD
Sbjct: 7 NSLIGGD 13
>sp|PG125_VAR67|SCAFFOLD protein OPG125|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 NALLGGD 9
N+L+GGD
Sbjct: 7 NSLIGGD 13
>sp|PG125_VACCT|SCAFFOLD protein OPG125|Vaccinia virus (strain Tian Tan)
Query: 3 NALLGGD 9
N+L+GGD
Sbjct: 7 NSLIGGD 13
>sp|PG125_VACCC|SCAFFOLD protein OPG125|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 NALLGGD 9
N+L+GGD
Sbjct: 7 NSLIGGD 13
>sp|PG125_VACCA|SCAFFOLD protein OPG125|Vaccinia virus (strain Ankara) (VACV)
Query: 3 NALLGGD 9
N+L+GGD
Sbjct: 7 NSLIGGD 13
>sp|D13_VARV|SCAFFOLD protein D13|Variola virus
Query: 3 NALLGGD 9
N+L+GGD
Sbjct: 7 NSLIGGD 13
>sp|VPK_HHV8P|VIRAL protein kinase|Human herpesvirus 8 type P
Query: 1 PNNALLGGDL 10
P+N L GDL
Sbjct: 204 PDNILATGDL 213
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 PNNALLGG 8
PN LGG
Sbjct: 524 PNTKFLGG 531
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 PNNALLG 7
PN+ LLG
Sbjct: 553 PNDVLLG 559
>sp|VP6_ROTGI|INTERMEDIATE capsid protein VP6|Rotavirus B (isolate RVB/Rat/United
Query: 1 PNNALLGGDL 10
PN ++ GG++
Sbjct: 169 PNASMTGGNI 178
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 PNNALLGG 8
P NA+ GG
Sbjct: 1418 PANAIYGG 1425
>sp|GAG_SFV3L|GAG polyprotein|Simian foamy virus type 3
Query: 3 NALLGGDL 10
NAL+GG L
Sbjct: 334 NALIGGSL 341
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 2 NNALLGGD 9
NN L+ GD
Sbjct: 147 NNTLVSGD 154
>sp|CEP1_HHV8P|CYTOPLASMIC envelopment protein 1|Human herpesvirus 8 type P
Query: 2 NNALLGGD 9
NNAL+G +
Sbjct: 48 NNALVGSN 55
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 PNNALLGG 8
P NA+ GG
Sbjct: 1428 PANAVYGG 1435
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 PNNALLGG 8
P NA+ GG
Sbjct: 1428 PANAVYGG 1435
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 PNNALLGG 8
P NA+ GG
Sbjct: 1428 PANAVYGG 1435
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 PNNALLGG 8
P NA+ GG
Sbjct: 1428 PANAVYGG 1435
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 PNNALLGG 8
P NA+ GG
Sbjct: 1428 PANAVYGG 1435
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 PNNALLGG 8
P NA+ GG
Sbjct: 1428 PANAVYGG 1435
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 PNNALLGG 8
P NA+ GG
Sbjct: 1428 PANAVYGG 1435
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 PNNALLGG 8
P NA+ GG
Sbjct: 1418 PANAVYGG 1425
>sp|VP9_CTFVL|STRUCTURAL protein VP9|Colorado tick fever virus (strain
Query: 3 NALLGG 8
N+LLGG
Sbjct: 225 NSLLGG 230
>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain
Query: 3 NALLGG 8
N+LLGG
Sbjct: 225 NSLLGG 230
>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain
Query: 1 PNNALLGGD 9
PN+ LG D
Sbjct: 352 PNSQCLGDD 360
>sp|GAG_FOAMV|GAG polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 3 NALLGGDL 10
NA+LGG++
Sbjct: 352 NAILGGNI 359
>sp|US12_HCMVM|UNCHARACTERIZED protein US12|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PNNALLGGDL 10
P+N GDL
Sbjct: 227 PSNCYTDGDL 236
>sp|US12_HCMVA|UNCHARACTERIZED protein HVLF6|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PNNALLGGDL 10
P+N GDL
Sbjct: 227 PSNCYTDGDL 236
132|SequenceR|665|656|MADLTPNNAL
>sp|VPK2_VACCP|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain L-IVP) (VACV)
Query: 2 ADLTPNNAL 10
ADL P+N L
Sbjct: 273 ADLKPDNIL 281
>sp|VPK2_VACCC|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 ADLTPNNAL 10
ADL P+N L
Sbjct: 306 ADLKPDNIL 314
>sp|VPK2_VACCA|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Ankara) (VACV)
Query: 2 ADLTPNNAL 10
ADL P+N L
Sbjct: 306 ADLKPDNIL 314
>sp|VPK2_MONPV|SERINE/THREONINE-PROTEIN kinase 2|Monkeypox virus (MPXV)
Query: 2 ADLTPNNAL 10
ADL P+N L
Sbjct: 306 ADLKPDNIL 314
>sp|VPK2_VACCT|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Tian Tan)
Query: 2 ADLTPNNAL 10
ADL P+N L
Sbjct: 306 ADLKPDNIL 314
>sp|VPK2_VAR67|SERINE/THREONINE-PROTEIN kinase 2|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 ADLTPNNAL 10
ADL P+N L
Sbjct: 306 ADLKPDNIL 314
>sp|PB2_I000F|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Weybridge
Query: 1 MADLTPNNAL 10
+ D+TPN +
Sbjct: 464 LPDMTPNTEM 473
>sp|PB2_I02A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 1 MADLTPNNAL 10
+ D+TPN +
Sbjct: 464 LPDMTPNTEM 473
>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 MADLTPN 7
MA+L PN
Sbjct: 28 MAELCPN 34
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 3 DLTPNNAL 10
D+TP NA+
Sbjct: 815 DVTPLNAM 822
>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 DLTPNNAL 10
D+TP N L
Sbjct: 456 DITPMNVL 463
>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 DLTPNNAL 10
D+TP N L
Sbjct: 456 DITPMNVL 463
>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 DLTPNNAL 10
D+TP N L
Sbjct: 456 DITPMNVL 463
>sp|PG089_MONPV|PUTATIVE nuclease OPG089|Monkeypox virus (MPXV)
Query: 2 ADLTPNN 8
A +TPNN
Sbjct: 249 ASITPNN 255
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 2 ADLTPNN 8
AD+TP+N
Sbjct: 467 ADVTPDN 473
>sp|PG089_VACCC|PUTATIVE nuclease OPG089|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 ADLTPNN 8
A +TPNN
Sbjct: 249 ASITPNN 255
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 3 DLTPNNA 9
+LTP NA
Sbjct: 324 ELTPENA 330
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 3 DLTPNNA 9
+LTP NA
Sbjct: 317 ELTPENA 323
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 3 DLTPNNA 9
+LTP NA
Sbjct: 322 ELTPENA 328
133|SequenceR|670|661|EHIETMADLT
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 EHIETMADLT 10
+H+ TM D T
Sbjct: 1789 QHLRTMVDTT 1798
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 EHIETMADLT 10
+H+ TM D T
Sbjct: 1789 QHLRTMVDTT 1798
>sp|PB2_INCBE|POLYMERASE basic protein 2|Influenza C virus (strain C/Berlin/1/1985)
Query: 5 TMADLT 10
TMADLT
Sbjct: 431 TMADLT 436
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 HIETMADLT 10
H++ M DL+
Sbjct: 463 HVQMMVDLS 471
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 4 ETMADLT 10
+TM+DLT
Sbjct: 1269 DTMSDLT 1275
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 4 ETMADLT 10
+TM+DLT
Sbjct: 1269 DTMSDLT 1275
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 4 ETMADLT 10
+TM+DLT
Sbjct: 1269 DTMSDLT 1275
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 4 ETMADLT 10
+TM+DLT
Sbjct: 1269 DTMSDLT 1275
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 4 ETMADLT 10
+TM+DLT
Sbjct: 1269 DTMSDLT 1275
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 4 ETMADLT 10
+TM+DLT
Sbjct: 1269 DTMSDLT 1275
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 4 ETMADLT 10
+TM+DLT
Sbjct: 1269 DTMSDLT 1275
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 4 ETMADLT 10
+TM+DLT
Sbjct: 1269 DTMSDLT 1275
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 4 ETMADLT 10
+TM+DLT
Sbjct: 1270 DTMSDLT 1276
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 4 ETMADLT 10
+TM+DLT
Sbjct: 1269 DTMSDLT 1275
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 4 ETMADLT 10
+TM+DLT
Sbjct: 1269 DTMSDLT 1275
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 4 ETMADLT 10
+TM+DLT
Sbjct: 1270 DTMSDLT 1276
>sp|VPU_HV192|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 1 EHIETMADL 9
E +ETM D+
Sbjct: 67 EELETMVDM 75
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 EHIETMADLT 10
+HI M DL+
Sbjct: 712 KHIPLMTDLS 721
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 1 EHIETMADLT 10
+HI M DL+
Sbjct: 712 KHIPLMTDLS 721
>sp|PG153_MONPV|ENVELOP protein OPG153|Monkeypox virus (MPXV)
Query: 2 HIETMADLT 10
HIET+ T
Sbjct: 462 HIETLGQYT 470
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 1 EHIETMADLT 10
+HI M DL+
Sbjct: 712 KHIPLMTDLS 721
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 EHIETMADLT 10
+HI M DL+
Sbjct: 712 KHIPLMTDLS 721
134|SequenceR|675|666|LDQNYEHIET
>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)
Query: 1 LDQNYEHIET 10
LD+ +EH+ T
Sbjct: 482 LDKTHEHLPT 491
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 LDQNYEHIET 10
LD+ +EH+ T
Sbjct: 482 LDKTHEHLPT 491
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 4 NYEHI 8
NYEHI
Sbjct: 211 NYEHI 215
>sp|ICP27_HHV7J|MRNA export factor ICP27 homolog|Human herpesvirus 7 (strain JI)
Query: 1 LDQNYEHIET 10
LD +YE +ET
Sbjct: 503 LDLDYEDVET 512
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 LDQNYEHIET 10
LD+ EH+ T
Sbjct: 482 LDKTVEHLPT 491
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 LDQNYEHIET 10
LD+ EH+ T
Sbjct: 482 LDKTVEHLPT 491
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 LDQNYEHIET 10
LD+ EH+ T
Sbjct: 482 LDKTSEHLPT 491
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 LDQNYEHIET 10
LD+ EH+ T
Sbjct: 482 LDKTAEHLPT 491
>sp|POLG_LIVSB|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/SB
Query: 1 LDQNYEHIET 10
LD+ EH+ T
Sbjct: 202 LDKTAEHLPT 211
>sp|POLG_LIVNO|GENOME polyprotein|Louping ill virus (isolate Sheep
Query: 1 LDQNYEHIET 10
LD+ EH+ T
Sbjct: 202 LDKTAEHLPT 211
>sp|POLG_LIVN1|GENOME polyprotein|Louping ill virus (strain Negishi
Query: 1 LDQNYEHIET 10
LD+ EH+ T
Sbjct: 202 LDKTAEHLPT 211
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 LDQNYEHIET 10
LD+ EH+ T
Sbjct: 482 LDKTAEHLPT 491
>sp|POLG_LIV31|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/31/1931)
Query: 1 LDQNYEHIET 10
LD+ EH+ T
Sbjct: 202 LDKTAEHLPT 211
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 LDQNYEHIET 10
LD+ EH+ T
Sbjct: 482 LDKTAEHLPT 491
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 1 LDQNYEHIE 9
LDQ EH++
Sbjct: 152 LDQTCEHLK 160
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 1 LDQNYEHIE 9
LDQ EH++
Sbjct: 152 LDQTCEHLK 160
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 1 LDQNYEHIE 9
LDQ EH++
Sbjct: 152 LDQTCEHLK 160
>sp|TRX2_HCMVM|TRIPLEX capsid protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LDQNYEHIE 9
LD++YE ++
Sbjct: 158 LDRSYEEVK 166
>sp|TRX2_HCMVA|TRIPLEX capsid protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LDQNYEHIE 9
LD++YE ++
Sbjct: 158 LDRSYEEVK 166
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 NYEHI 8
NY+HI
Sbjct: 5564 NYQHI 5568
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 NYEHI 8
NY+HI
Sbjct: 5602 NYQHI 5606
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 NYEHI 8
NY+HI
Sbjct: 5622 NYQHI 5626
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LDQNYEHI 8
+ +NY+H+
Sbjct: 6 IKKNYQHL 13
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 NYEHI 8
NY+HI
Sbjct: 5652 NYQHI 5656
>sp|ENV_HV1Z3|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 1 LDQNYEHI 8
+ +NY+H+
Sbjct: 6 IQRNYQHL 13
135|SequenceR|680|671|QGKRILDQNY
>sp|SPIKE_ADE31|FIBER protein|Human adenovirus A serotype 31
Query: 1 QGKRILDQNY 10
+GK ILD NY
Sbjct: 281 RGKIILDVNY 290
>sp|SPIKE_ADE12|FIBER protein|Human adenovirus A serotype 12
Query: 2 GKRILDQNY 10
G+ ILD NY
Sbjct: 313 GRIILDVNY 321
>sp|TAT_HV2KR|PROTEIN Tat|Human immunodeficiency virus type 2
Query: 1 QGKRILDQNY 10
QG+R+L Q Y
Sbjct: 35 QGERLLSQLY 44
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 4 RILDQNY 10
+ILDQ+Y
Sbjct: 2483 QILDQHY 2489
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 2 GKRILDQN 9
G R+LDQ+
Sbjct: 1051 GVRVLDQS 1058
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 GKRILDQN 9
G R+LDQ+
Sbjct: 1051 GVRVLDQS 1058
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 2 GKRILD 7
GKR+LD
Sbjct: 1021 GKRLLD 1026
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 2 GKRILD 7
GKR+LD
Sbjct: 1023 GKRLLD 1028
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 QGKRILD 7
QG R++D
Sbjct: 1652 QGNRVID 1658
>sp|NSP2_ROTH7|NON-STRUCTURAL protein 2|Rotavirus A (isolate RVA/Human/United
Query: 5 ILDQNY 10
ILDQN+
Sbjct: 179 ILDQNF 184
>sp|NSP2_ROTH6|NON-STRUCTURAL protein 2|Rotavirus A (strain
Query: 5 ILDQNY 10
ILDQN+
Sbjct: 179 ILDQNF 184
>sp|NSP2_ROT41|NON-STRUCTURAL protein 2|Rotavirus A (isolate
Query: 5 ILDQNY 10
ILDQN+
Sbjct: 179 ILDQNF 184
>sp|VP6_ROTGA|INTERMEDIATE capsid protein VP6|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 3 KRILDQN 9
+R+L+QN
Sbjct: 110 RRVLEQN 116
>sp|NSP2_ROTHW|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United
Query: 5 ILDQNY 10
ILDQN+
Sbjct: 179 ILDQNF 184
>sp|NSP2_ROTH3|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 5 ILDQNY 10
ILDQN+
Sbjct: 179 ILDQNF 184
>sp|NSP2_ROTWI|NON-STRUCTURAL protein 2|Rotavirus A (isolate RVA/Human/United
Query: 5 ILDQNY 10
ILDQN+
Sbjct: 179 ILDQNF 184
>sp|NSP2_ROTHP|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United
Query: 5 ILDQNY 10
ILDQN+
Sbjct: 179 ILDQNF 184
>sp|NSP2_ROTAD|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United
Query: 5 ILDQNY 10
ILDQN+
Sbjct: 179 ILDQNF 184
>sp|NSP2_ROTHT|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United
Query: 5 ILDQNY 10
ILDQN+
Sbjct: 179 ILDQNF 184
>sp|NSP2_ROTHL|NON-STRUCTURAL protein 2|Rotavirus A (strain
Query: 5 ILDQNY 10
ILDQN+
Sbjct: 179 ILDQNF 184
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 QGKRILDQN 9
Q KRI QN
Sbjct: 647 QNKRIHSQN 655
>sp|NSP2_ROTHK|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 5 ILDQNY 10
ILDQN+
Sbjct: 179 ILDQNF 184
136|SequenceR|685|676|KVKNAQGKRI
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 3 KNAQGKR 9
KNAQGKR
Sbjct: 1382 KNAQGKR 1388
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 KVKNAQGKR 9
K+KN+Q K+
Sbjct: 2053 KIKNSQSKQ 2061
>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38
Query: 3 KNAQGKR 9
KN QG+R
Sbjct: 287 KNGQGQR 293
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VKNAQGKRI 10
V+NAQG+ I
Sbjct: 141 VQNAQGQMI 149
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VKNAQGKRI 10
V+NAQG+ I
Sbjct: 134 VQNAQGQMI 142
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VKNAQGKRI 10
V+NAQG+ +
Sbjct: 135 VQNAQGQMV 143
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VKNAQGKRI 10
V+NAQG+ +
Sbjct: 137 VQNAQGQMV 145
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VKNAQGKRI 10
V+NAQG+ +
Sbjct: 137 VQNAQGQMV 145
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VKNAQGKRI 10
V+NAQG+ +
Sbjct: 135 VQNAQGQMV 143
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VKNAQGKRI 10
V+NAQG+ +
Sbjct: 131 VQNAQGQPV 139
>sp|GAG_HV190|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 VKNAQGKRI 10
V+NAQG+ +
Sbjct: 135 VQNAQGQMV 143
>sp|GAG_HV1V9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 VKNAQGKRI 10
V+NAQG+ +
Sbjct: 137 VQNAQGQMV 145
>sp|GAG_HV19N|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 VKNAQGKRI 10
V+NAQG+ I
Sbjct: 134 VQNAQGQMI 142
137|SequenceR|690|681|VISLKKVKNA
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 VISLKKVK 8
++SLK+VK
Sbjct: 91 MLSLKRVK 98
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 1 VISLKKVK 8
++SLK+VK
Sbjct: 91 MLSLKRVK 98
138|SequenceR|695|686|TGLSVVISLK
***** No hits found ******
139|SequenceR|700|691|QPSRGTGLSV
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 1 QPSRGTGLSV 10
QPS G LS+
Sbjct: 147 QPSIGVNLSI 156
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank
Query: 1 QPSRGTGL 8
QP R TG+
Sbjct: 440 QPKRTTGV 447
>sp|VP10_CTFVL|MICROTUBULE-ASSOCIATED protein VP10|Colorado tick fever virus (strain
Query: 4 RGTGLSV 10
RG GLSV
Sbjct: 562 RGQGLSV 568
>sp|CXCL1_HCMVM|CHEMOKINE vCXCL1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QPSRGTG 7
QP RG G
Sbjct: 103 QPERGPG 109
>sp|ORF50_HHV8P|REPLICATION and transcription activator|Human herpesvirus 8 type P
Query: 2 PSRGTG 7
P+RGTG
Sbjct: 373 PARGTG 378
>sp|VL1_HPV1|MAJOR capsid protein L1|Human papillomavirus type 1 (Human
Query: 3 SRGTGLSV 10
+RGT LS+
Sbjct: 344 TRGTSLSI 351
>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 QPSRGTGLSV 10
QPS G+G S
Sbjct: 802 QPSTGSGTSA 811
>sp|EBNA4_EBVB9|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 QPSRGTGLS 9
QPS G+G S
Sbjct: 802 QPSPGSGTS 810
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 2 PSRGTGLSV 10
PS GLSV
Sbjct: 262 PSNKNGLSV 270
140|SequenceR|705|696|CTVPVQPSRG
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 TVPVQPSR 9
T P+QPSR
Sbjct: 1848 TSPLQPSR 1855
>sp|VL2_HPV34|MINOR capsid protein L2|Human papillomavirus type 34
Query: 2 TVPVQPS 8
TVPVQPS
Sbjct: 430 TVPVQPS 436
Query: 3 VPVQPSR 9
+P+QP+R
Sbjct: 87 IPLQPTR 93
>sp|ORF24_TTVV1|UNCHARACTERIZED ORF2/4 protein|Torque teno virus (strain VT416)
Query: 3 VPVQPSRG 10
VP+QP RG
Sbjct: 132 VPLQPRRG 139
>sp|ORF24_TTVV2|ORF2/4 protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 3 VPVQPSRG 10
VP+QP RG
Sbjct: 132 VPLQPRRG 139
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 CTVPVQPS 8
CTV V PS
Sbjct: 648 CTVAVHPS 655
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 CTVPVQPS 8
CTV V PS
Sbjct: 648 CTVAVHPS 655
>sp|VL2_HPV48|MINOR capsid protein L2|Human papillomavirus type 48
Query: 2 TVPVQPSRG 10
+ PV+P RG
Sbjct: 239 STPVKPGRG 247
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CTVPVQPS 8
CT+ V PS
Sbjct: 648 CTIAVHPS 655
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 CTVPVQPSR 9
T+P++P+R
Sbjct: 891 ATIPLKPTR 899
>sp|Z_MACHU|RING finger protein Z|Machupo virus (MACV)
Query: 2 TVPVQPS 8
TVPV+PS
Sbjct: 84 TVPVEPS 90
>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40
Query: 2 TVPVQPSRG 10
T P+QP G
Sbjct: 203 TTPMQPCYG 211
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 CTVPVQ 6
C +PVQ
Sbjct: 625 CKIPVQ 630
>sp|GO_HCMVA|GLYCOPROTEIN O|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 TVPVQPSRG 10
T P PS G
Sbjct: 401 TTPTSPSMG 409
>sp|GAG_SFV3L|GAG polyprotein|Simian foamy virus type 3
Query: 3 VPVQPS 8
+PVQPS
Sbjct: 247 IPVQPS 252
>sp|Z_JUNIN|RING finger protein Z|Junin mammarenavirus (JUNV) (Junn
Query: 2 TVPVQPS 8
TVPV+P+
Sbjct: 84 TVPVEPT 90
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 CTVPVQPSRG 10
CT +QP+ G
Sbjct: 481 CTCFLQPAEG 490
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 CTVPVQPSRG 10
CT +QP+ G
Sbjct: 481 CTCFLQPAEG 490
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 CTVPVQPS 8
C VPV P+
Sbjct: 238 CWVPVSPN 245
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 CTVPVQPSRG 10
CT +QP+ G
Sbjct: 481 CTCFLQPAEG 490
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 CTVPVQPSRG 10
CT +QP+ G
Sbjct: 481 CTCFLQPAEG 490
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 CTVPVQPSRG 10
CT +QP+ G
Sbjct: 481 CTCFLQPAEG 490
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 2 TVPVQPSR 9
TVPV P R
Sbjct: 1729 TVPVAPPR 1736
>sp|VL2_HPV67|MINOR capsid protein L2|Human papillomavirus 67
Query: 1 CTVPVQP 7
TVP+QP
Sbjct: 399 STVPLQP 405
141|SequenceR|710|701|RFVDVCTVPV
>sp|VE2_HPV45|REGULATORY protein E2|Human papillomavirus 45
Query: 2 FVDVCTVP 9
F+DV T+P
Sbjct: 349 FLDVVTIP 356
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 4 DVCTVP 9
DVCT P
Sbjct: 226 DVCTTP 231
>sp|NTP1_VARV|NUCLEOSIDE triphosphatase I|Variola virus
Query: 1 RFVDVC 6
+F+DVC
Sbjct: 367 KFIDVC 372
>sp|NTP1_VAR67|NUCLEOSIDE triphosphatase I|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 RFVDVC 6
+F+DVC
Sbjct: 367 KFIDVC 372
>sp|NTP1_VACCC|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 RFVDVC 6
+F+DVC
Sbjct: 367 KFIDVC 372
>sp|NTP1_VACCA|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Ankara) (VACV)
Query: 1 RFVDVC 6
+F+DVC
Sbjct: 367 KFIDVC 372
>sp|NTP1_MONPV|NUCLEOSIDE triphosphatase I|Monkeypox virus (MPXV)
Query: 1 RFVDVC 6
+F+DVC
Sbjct: 367 KFIDVC 372
>sp|SCAF_HHV6U|CAPSID scaffolding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 VDVCTVPV 10
V+ C VPV
Sbjct: 261 VETCDVPV 268
>sp|NCAP_PI2HT|NUCLEOPROTEIN parainfluenza 2 virus (strain
Query: 1 RFVDVC 6
+F+DVC
Sbjct: 162 KFLDVC 167
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 RFVDVC 6
+F+DVC
Sbjct: 1773 KFLDVC 1778
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 RFVDVC 6
+F+DVC
Sbjct: 1771 KFLDVC 1776
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 RFVDVC 6
+F+DVC
Sbjct: 1770 KFLDVC 1775
>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65
Query: 5 VCTVPV 10
+CTVP+
Sbjct: 389 LCTVPL 394
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 1 RFVDVC 6
+F+D+C
Sbjct: 1769 KFLDIC 1774
>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22
Query: 2 FVDVCTV 8
+VD CT+
Sbjct: 328 YVDECTI 334
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 3 VDVCTVP 9
+DV TVP
Sbjct: 206 LDVATVP 212
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 3 VDVCTVP 9
+DV TVP
Sbjct: 206 LDVATVP 212
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 3 VDVCTVP 9
+DV TVP
Sbjct: 206 LDVATVP 212
>sp|VL2_HPV41|MINOR capsid protein L2|Human papillomavirus type 41
Query: 3 VDVCTVPV 10
VD+ T+P+
Sbjct: 464 VDIMTIPI 471
>sp|PG031_MONPV|PROTEIN OPG031|Monkeypox virus (MPXV)
Query: 2 FVDVC 6
FVD+C
Sbjct: 220 FVDIC 224
142|SequenceR|715|706|WPNSPRFVDV
>sp|NCAP_LYCVW|NUCLEOPROTEIN choriomeningitis virus (strain WE)
Query: 2 PNSPRFVDV 10
PN+P ++D+
Sbjct: 375 PNAPTWIDI 383
>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)
Query: 2 PNSPRFVDV 10
PN+P ++D+
Sbjct: 375 PNAPTWIDI 383
>sp|EP84_HCMVA|EARLY phosphoprotein p84|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PNSPRFVDV 10
P SPRF D+
Sbjct: 447 PRSPRFDDI 455
>sp|EP84_HCMVM|EARLY phosphoprotein p84|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PNSPRFVDV 10
P SPRF D+
Sbjct: 447 PRSPRFDDI 455
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 PNSPR 6
PNSPR
Sbjct: 461 PNSPR 465
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 PNSPR 6
PNSPR
Sbjct: 457 PNSPR 461
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 PNSPR 6
PNSPR
Sbjct: 461 PNSPR 465
>sp|PP85_HCMVM|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PNSPRFVDV 10
P SPR +V
Sbjct: 346 PESPRLTEV 354
>sp|PP85_HCMVA|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PNSPRFVDV 10
P SPR +V
Sbjct: 346 PESPRLTEV 354
>sp|NCAP_VSNJO|NUCLEOPROTEIN stomatitis New Jersey virus
Query: 1 WPNSPRFVDV 10
W N P F +
Sbjct: 185 WENDPNFTKI 194
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 1 WPNSPRFVDV 10
W N RF DV
Sbjct: 636 WYNLLRFADV 645
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 PRFVDV 10
PRFVDV
Sbjct: 95 PRFVDV 100
>sp|SCAF_HCMVM|CAPSID scaffolding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 SPRFVDV 10
SPRF+++
Sbjct: 90 SPRFLEI 96
>sp|SCAF_HCMVA|CAPSID scaffolding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 SPRFVDV 10
SPRF+++
Sbjct: 90 SPRFLEI 96
>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 PRFVDV 10
PRFVDV
Sbjct: 95 PRFVDV 100
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 PNSPRFVD 9
P PR+VD
Sbjct: 2074 PLKPRWVD 2081
>sp|EBNA4_EBVB9|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 PRFVDV 10
PRFVDV
Sbjct: 95 PRFVDV 100
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 PNSPRF 7
PN P+F
Sbjct: 2279 PNRPKF 2284
143|SequenceR|720|711|TKALEWPNSP
>sp|VU51_HHV6Z|G-PROTEIN coupled receptor homolog U51|Human herpesvirus 6B (strain Z29)
Query: 1 TKALEWP 7
TK+L WP
Sbjct: 5 TKSLAWP 11
>sp|VU51_HHV6U|G-PROTEIN coupled receptor homolog U51|Human herpesvirus 6A (strain
Query: 1 TKALEWP 7
TK+L WP
Sbjct: 5 TKSLAWP 11
>sp|NSS_SFSV|NON-STRUCTURAL protein NS-S|Sandfly fever sicilian virus (SFS)
Query: 2 KALEWP 7
KAL WP
Sbjct: 121 KALSWP 126
>sp|VP2_LORDV|MINOR capsid protein VP2|Lordsdale virus (strain GII/Human/United
Query: 1 TKALEWPNS 9
TKAL+W +
Sbjct: 106 TKALDWSGT 114
>sp|MCES_YMTV5|MRNA-CAPPING enzyme small subunit|Yaba monkey tumor virus (strain
Query: 1 TKALEWPNS 9
TK+L W S
Sbjct: 217 TKSLNWKES 225
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 KALEWPNS 9
K EWP S
Sbjct: 1015 KTCEWPKS 1022
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 KALEWPNS 9
K EWP S
Sbjct: 1015 KTCEWPKS 1022
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 KALEWPNS 9
K EWP S
Sbjct: 1011 KTCEWPKS 1018
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 2 KALEWPNSP 10
+ + WPN+P
Sbjct: 1090 ETVPWPNTP 1098
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 TKALEWPNS 9
TKA WP S
Sbjct: 1013 TKACIWPRS 1021
>sp|PRO_ADE40|PROTEASE adenovirus F serotype 40
Query: 4 LEWPNSP 10
+ WP SP
Sbjct: 134 VNWPTSP 140
>sp|UL43_HCMVM|TEGUMENT protein UL43|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 LEWPN 8
L WPN
Sbjct: 147 LSWPN 151
>sp|UL43_HCMVA|TEGUMENT protein UL43|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 LEWPN 8
L WPN
Sbjct: 147 LSWPN 151
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 1 TKALEWPNS 9
T L WPN+
Sbjct: 33 TFMLSWPNN 41
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 5 EWPNS 9
EWP+S
Sbjct: 1184 EWPHS 1188
144|SequenceR|725|716|KAGFVTKALE
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAGFVT 6
KAGFVT
Sbjct: 1051 KAGFVT 1056
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAGFVT 6
KAGFVT
Sbjct: 1051 KAGFVT 1056
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAGFVTK 7
KAG+VT+
Sbjct: 1040 KAGYVTE 1046
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAGFVTK 7
KAG+VT+
Sbjct: 1042 KAGYVTE 1048
>sp|TAT_HV1H3|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 4 FVTKAL 9
F+TKAL
Sbjct: 38 FITKAL 43
>sp|TAT_HV1H2|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 4 FVTKAL 9
F+TKAL
Sbjct: 38 FITKAL 43
>sp|TAT_HV1B5|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 4 FVTKAL 9
F+TKAL
Sbjct: 38 FITKAL 43
>sp|TAT_HV1B1|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 4 FVTKAL 9
F+TKAL
Sbjct: 38 FITKAL 43
>sp|TAT_HV112|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 4 FVTKAL 9
F+TKAL
Sbjct: 38 FITKAL 43
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 KAGFVT 6
KAG+VT
Sbjct: 1064 KAGYVT 1069
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAGFVT 6
KAG+VT
Sbjct: 1034 KAGYVT 1039
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 KAGFVT 6
KAG+VT
Sbjct: 1063 KAGYVT 1068
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 KAGFVT 6
KAG+VT
Sbjct: 1063 KAGYVT 1068
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 KAGFVT 6
KAG+VT
Sbjct: 1064 KAGYVT 1069
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 KAGFVT 6
KAG+VT
Sbjct: 1065 KAGYVT 1070
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAGFVT 6
KAG+VT
Sbjct: 1036 KAGYVT 1041
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 KAGFVT 6
KAG+VT
Sbjct: 1062 KAGYVT 1067
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAGFVT 6
KAG+VT
Sbjct: 1039 KAGYVT 1044
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAGFVT 6
KAG+VT
Sbjct: 1037 KAGYVT 1042
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 KAGFVT 6
KAG+VT
Sbjct: 1063 KAGYVT 1068
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAGFVT 6
KAG+VT
Sbjct: 1036 KAGYVT 1041
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAGFVT 6
KAG+VT
Sbjct: 1038 KAGYVT 1043
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAGFVT 6
KAG+VT
Sbjct: 1038 KAGYVT 1043
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAGFVT 6
KAG+VT
Sbjct: 1041 KAGYVT 1046
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAGFVT 6
KAG+VT
Sbjct: 1041 KAGYVT 1046
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAGFVT 6
KAG+VT
Sbjct: 1045 KAGYVT 1050
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAGFVT 6
KAG+VT
Sbjct: 1041 KAGYVT 1046
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAGFVT 6
KAG+VT
Sbjct: 1053 KAGYVT 1058
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KAGFVT 6
KAG+VT
Sbjct: 1043 KAGYVT 1048
145|SequenceR|730|721|MKGLEKAGFV
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 KGLEKAGFV 10
KGL+K G++
Sbjct: 3032 KGLQKLGYI 3040
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 KGLEKAGFV 10
KGL+K G++
Sbjct: 3036 KGLQKLGYI 3044
>sp|UL12_HCMVA|UNCHARACTERIZED protein UL12|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 MKGLEKAGF 9
MKG+ GF
Sbjct: 13 MKGIRDVGF 21
>sp|NCAP_INCCA|NUCLEOPROTEIN C virus (strain C/California/1978)
Query: 1 MKGLEKAGF 9
M+G+EK F
Sbjct: 230 MQGIEKKAF 238
>sp|NCAP_INCAA|NUCLEOPROTEIN C virus (strain C/Ann
Query: 1 MKGLEKAGF 9
M+G+EK F
Sbjct: 230 MQGIEKKAF 238
>sp|NCAP_INCJH|NUCLEOPROTEIN C virus (strain C/Johannesburg/1/1966)
Query: 1 MKGLEKAGF 9
M+G+EK F
Sbjct: 230 MQGIEKKAF 238
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 KGLEKAGFV 10
+GL+K G++
Sbjct: 3030 QGLQKLGYI 3038
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 3 GLEKAGFV 10
GL+K G+V
Sbjct: 3033 GLQKLGYV 3040
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 3 GLEKAGFV 10
GL+K G++
Sbjct: 3041 GLQKLGYI 3048
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 3 GLEKAGFV 10
GL+K G++
Sbjct: 3041 GLQKLGYI 3048
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 3 GLEKAGFV 10
GL+K G++
Sbjct: 3038 GLQKLGYI 3045
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 3 GLEKAG 8
GL+KAG
Sbjct: 389 GLDKAG 394
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 3 GLEKAG 8
GL+KAG
Sbjct: 389 GLDKAG 394
>sp|POLS_RRV2|STRUCTURAL polyprotein|Ross river virus (strain 213970)
Query: 3 GLEKAG 8
GL+KAG
Sbjct: 55 GLDKAG 60
146|SequenceR|735|726|CCDVVMKGLE
>sp|GK_VZVO|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Oka vaccine)
Query: 1 CCDVVMKGL 9
CC VM GL
Sbjct: 294 CCATVMSGL 302
>sp|GK_VZVD|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 CCDVVMKGL 9
CC VM GL
Sbjct: 294 CCATVMSGL 302
>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype 1
Query: 1 CCDVVMKG 8
CC V M+G
Sbjct: 569 CCVVSMRG 576
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 CCDVVMKGLE 10
C D ++G+E
Sbjct: 269 CTDEALRGIE 278
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 DVVMKGLE 10
DVV++GL+
Sbjct: 1679 DVVLQGLK 1686
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 DVVMKGLE 10
DVV++GL+
Sbjct: 1679 DVVLQGLK 1686
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 1 CCDVVMKGL 9
C D V KG+
Sbjct: 253 CEDTVFKGV 261
147|SequenceR|740|731|GDPDTCCDVV
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 GDPDTCCD 8
GDPD CD
Sbjct: 2407 GDPDLSCD 2414
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 GDPDTCCD 8
GDPD CD
Sbjct: 2407 GDPDLSCD 2414
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 4 DTCCDV 9
DTCC +
Sbjct: 1638 DTCCSI 1643
>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate
Query: 2 DPDTCCD 8
DP CC+
Sbjct: 154 DPRICCE 160
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 4 DTCCDV 9
DTCC +
Sbjct: 1638 DTCCPI 1643
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 4 DTCCDV 9
DTCC +
Sbjct: 1638 DTCCPI 1643
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 2 DPDTCC 7
DP CC
Sbjct: 10 DPKECC 15
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 6 CCDVV 10
CCDV+
Sbjct: 238 CCDVL 242
>sp|GLYC_JUNIN|PRE-GLYCOPROTEIN polyprotein GP complex|Junin mammarenavirus (JUNV) (Junn
Query: 3 PDTCCD 8
PD+C D
Sbjct: 204 PDSCLD 209
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 DTCCD 8
D CCD
Sbjct: 951 DLCCD 955
>sp|KBTB2_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 2 DPDTCCDVV 10
D D CDV+
Sbjct: 15 DDDILCDVI 23
>sp|PG138_MONPV|25 kDa core protein OPG138|Monkeypox virus (MPXV)
Query: 2 DPDTCC 7
+PD CC
Sbjct: 179 NPDDCC 184
>sp|KBTB2_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 2 DPDTCCDVV 10
D D CDV+
Sbjct: 21 DDDILCDVI 29
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 GDPDTCCD 8
G P +C D
Sbjct: 1286 GSPGSCTD 1293
>sp|PG138_VACCC|25 kDa core protein OPG138|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 DPDTCC 7
+PD CC
Sbjct: 181 NPDDCC 186
>sp|KBTB2_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton
Query: 2 DPDTCCDVV 10
D D CDV+
Sbjct: 21 DDDILCDVI 29
>sp|PG138_VACCA|25 kDa core protein OPG138|Vaccinia virus (strain Ankara) (VACV)
Query: 2 DPDTCC 7
+PD CC
Sbjct: 176 NPDDCC 181
>sp|VE6_HPV45|PROTEIN E6|Human papillomavirus 45
Query: 1 GDPDTCCD 8
G +TCCD
Sbjct: 136 GQCNTCCD 143
>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16
Query: 5 TCCD 8
TCCD
Sbjct: 232 TCCD 235
>sp|GCVK_HHV6U|PROBABLE ganciclovir kinase|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 DTCCDVV 10
D CC V+
Sbjct: 460 DACCKVL 466
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 2 DPDTC 6
DP+TC
Sbjct: 1148 DPNTC 1152
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 2 DPDTC 6
DP+TC
Sbjct: 1148 DPNTC 1152
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 2 DPDTC 6
DP+TC
Sbjct: 1148 DPNTC 1152
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 2 DPDTC 6
DP+TC
Sbjct: 1148 DPNTC 1152
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 2 DPDTC 6
DP+TC
Sbjct: 1148 DPNTC 1152
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 2 DPDTC 6
DP+TC
Sbjct: 1148 DPNTC 1152
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 2 DPDTC 6
DP+TC
Sbjct: 1148 DPNTC 1152
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 2 DPDTC 6
DP+TC
Sbjct: 1148 DPNTC 1152
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 DPDTC 6
DP+TC
Sbjct: 1148 DPNTC 1152
>sp|TRM2_HHV11|TRIPARTITE terminase subunit 2|Human herpesvirus 1 (strain 17)
Query: 3 PDTCC 7
PDT C
Sbjct: 97 PDTAC 101
>sp|GCVK_HHV7J|PROBABLE ganciclovir kinase|Human herpesvirus 7 (strain JI)
Query: 4 DTCCDVV 10
D CC V+
Sbjct: 444 DACCKVL 450
148|SequenceR|745|736|RDVARGDPDT
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 4 ARGDPDT 10
ARGDP++
Sbjct: 650 ARGDPES 656
>sp|VU55_HHV6U|UNCHARACTERIZED protein U55|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 ARGDPDT 10
ARG+P T
Sbjct: 412 ARGNPQT 418
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 1 RDVARGDPD 9
+D+ RG PD
Sbjct: 1917 QDLVRGFPD 1925
>sp|VE2_HPV14|REGULATORY protein E2|Human papillomavirus 14
Query: 3 VARGDPDT 10
+ RGDP+T
Sbjct: 404 LVRGDPNT 411
>sp|PG001_MONPV|CHEMOKINE-BINDING protein|Monkeypox virus (MPXV)
Query: 2 DVARGDPDT 10
+V +GDP T
Sbjct: 75 EVVKGDPTT 83
>sp|REV_HV196|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 5 RGDPD 9
RGDPD
Sbjct: 5 RGDPD 9
>sp|KITH_HHV23|THYMIDINE kinase|Human herpesvirus 2 (strain 333)
Query: 4 ARGDPD 9
ARGDP+
Sbjct: 40 ARGDPE 45
>sp|KITH_HHV2H|THYMIDINE kinase|Human herpesvirus 2 (strain HG52)
Query: 4 ARGDPD 9
ARGDP+
Sbjct: 40 ARGDPE 45
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 4 ARGDPDT 10
AR DPD+
Sbjct: 800 ARADPDS 806
149|SequenceR|750|741|CWARARDVAR
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 1 CWARARDVAR 10
C+AR+R A+
Sbjct: 733 CFARSRSGAK 742
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 1 CWARARDVAR 10
C+AR+R A+
Sbjct: 733 CFARSRSGAK 742
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 1 CWARARDVAR 10
C+AR+R A+
Sbjct: 729 CFARSRSGAK 738
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 1 CWARARDVAR 10
C+AR+R A+
Sbjct: 734 CFARSRSGAK 743
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 CWARARDVAR 10
C+AR+R A+
Sbjct: 734 CFARSRSGAK 743
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 1 CWARARDVAR 10
C+AR+R A+
Sbjct: 734 CFARSRSGAK 743
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 1 CWARARDVAR 10
C+AR+R A+
Sbjct: 734 CFARSRSGAK 743
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 1 CWARARDVAR 10
C+AR+R A+
Sbjct: 734 CFARSRSGAK 743
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 1 CWARARDVAR 10
C+AR+R A+
Sbjct: 734 CFARSRSGAK 743
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 1 CWARARDVAR 10
C+AR+R A+
Sbjct: 733 CFARSRSGAK 742
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 1 CWARARDVAR 10
C+AR+R A+
Sbjct: 734 CFARSRSGAK 743
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 CWARARDVAR 10
C+AR+R A+
Sbjct: 734 CFARSRSGAK 743
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 1 CWARARDVAR 10
C+AR+R A+
Sbjct: 733 CFARSRSGAK 742
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 1 CWARARDVAR 10
C+AR+R A+
Sbjct: 733 CFARSRSGAK 742
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 1 CWARARDVAR 10
C+AR+R A+
Sbjct: 734 CFARSRSGAK 743
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 CWARARDVAR 10
C+AR+R A+
Sbjct: 734 CFARSRSGAK 743
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 1 CWARARDVAR 10
C+AR+R A+
Sbjct: 733 CFARSRSGAK 742
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 1 CWARARDVAR 10
C+AR+R A+
Sbjct: 733 CFARSRSGAK 742
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 CWARARDVAR 10
C+AR+R A+
Sbjct: 734 CFARSRSGAK 743
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 1 CWARARDVAR 10
C+AR+R A+
Sbjct: 729 CFARSRSGAK 738
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 CWARARDVAR 10
C+AR+R A+
Sbjct: 734 CFARSRSGAK 743
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 CWARARDVAR 10
C+AR+R A+
Sbjct: 736 CFARSRSGAK 745
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 1 CWARARDVAR 10
C+AR+R A+
Sbjct: 736 CFARSRSGAK 745
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 CWARARDVAR 10
C+AR+R A+
Sbjct: 734 CFARSRSGAK 743
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 CWARARDVAR 10
C+AR+R A+
Sbjct: 729 CFARSRSGAK 738
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 CWARARDVAR 10
C+AR+R A+
Sbjct: 736 CFARSRSGAK 745
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 1 CWARARDVAR 10
C+AR+R A+
Sbjct: 734 CFARSRSGAK 743
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 CWARARDVAR 10
C+AR+R A+
Sbjct: 736 CFARSRSGAK 745
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 1 CWARARDVAR 10
C+AR+R A+
Sbjct: 736 CFARSRSGAK 745
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 1 CWARARDVAR 10
W R RD R
Sbjct: 28 IWNRVRDFPR 37
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 1 CWARARDVAR 10
W R RD R
Sbjct: 28 IWNRVRDFPR 37
150|SequenceR|755|746|IGVMECWARA
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 IGVMECWARA 10
+GVMEC A A
Sbjct: 735 LGVMECKASA 744
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 IGVMECWARA 10
+GVMEC A A
Sbjct: 735 LGVMECKASA 744
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 IGVMECWARA 10
+GVMEC A A
Sbjct: 735 LGVMECKASA 744
>sp|REX_HTL3P|PROTEIN Rex|Human T-cell leukemia virus 3
Query: 4 MECWARA 10
M CW RA
Sbjct: 63 MPCWPRA 69
>sp|NS1_INBYA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Yamagata/1/1973)
Query: 2 GVMECWAR 9
G++EC+ R
Sbjct: 26 GILECYER 33
>sp|NS1_INBVJ|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Victoria/1987)
Query: 2 GVMECWAR 9
G++EC+ R
Sbjct: 26 GILECYER 33
>sp|NS1_INBSJ|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Singapore/1964)
Query: 2 GVMECWAR 9
G++EC+ R
Sbjct: 26 GILECYER 33
>sp|NS1_INBSI|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Singapore/222/1979)
Query: 2 GVMECWAR 9
G++EC+ R
Sbjct: 26 GILECYER 33
>sp|NS1_INBRU|NON-STRUCTURAL protein 1|Influenza B virus (strain B/RU/1969)
Query: 2 GVMECWAR 9
G++EC+ R
Sbjct: 26 GILECYER 33
>sp|NS1_INBPA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/PA/1979)
Query: 2 GVMECWAR 9
G++EC+ R
Sbjct: 26 GILECYER 33
>sp|NS1_INBMD|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Maryland/1959)
Query: 2 GVMECWAR 9
G++EC+ R
Sbjct: 26 GILECYER 33
>sp|NS1_INBLE|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Lee/1940)
Query: 2 GVMECWAR 9
G++EC+ R
Sbjct: 26 GILECYER 33
>sp|NS1_INB|NON-STRUCTURAL protein 1|Influenza B virus (strain B/ID/1986)
Query: 2 GVMECWAR 9
G++EC+ R
Sbjct: 26 GILECYER 33
>sp|NS1_INBHT|NON-STRUCTURAL protein 1|Influenza B virus (strain B/HT/1984)
Query: 2 GVMECWAR 9
G++EC+ R
Sbjct: 26 GILECYER 33
>sp|NS1_INBHK|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Hong
Query: 2 GVMECWAR 9
G++EC+ R
Sbjct: 26 GILECYER 33
>sp|NS1_INBGL|NON-STRUCTURAL protein 1|Influenza B virus (strain B/GL/1954)
Query: 2 GVMECWAR 9
G++EC+ R
Sbjct: 26 GILECYER 33
>sp|NS1_INBGA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/GA/1986)
Query: 2 GVMECWAR 9
G++EC+ R
Sbjct: 26 GILECYER 33
>sp|NS1_INBBA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/BA/1978)
Query: 2 GVMECWAR 9
G++EC+ R
Sbjct: 26 GILECYER 33
>sp|NS1_INBAD|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Ann
Query: 2 GVMECWAR 9
G++EC+ R
Sbjct: 26 GILECYER 33
>sp|NS1_INBAC|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Ann
Query: 2 GVMECWAR 9
G++EC+ R
Sbjct: 26 GILECYER 33
>sp|GLYCO_RABVP|GLYCOPROTEIN virus (strain Pasteur vaccins
Query: 1 IGVMECWAR 9
I +M CW R
Sbjct: 474 IFLMTCWRR 482
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 2 GVMECWAR 9
G+MEC R
Sbjct: 545 GLMECHCR 552
>sp|UL38_HCMVM|APOPTOSIS inhibitor UL38|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GVMECWARA 10
GV+E W A
Sbjct: 98 GVIEAWEEA 106
>sp|UL38_HCMVA|APOPTOSIS inhibitor UL38|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GVMECWARA 10
GV+E W A
Sbjct: 98 GVIEAWEEA 106
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 2 GVMECWAR 9
GV+ C AR
Sbjct: 150 GVLSCLAR 157
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 IGVMEC 6
+G+MEC
Sbjct: 1258 LGLMEC 1263
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 1 IGVMEC 6
+G+MEC
Sbjct: 1254 LGLMEC 1259
>sp|TYSY_VZVO|THYMIDYLATE synthase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 IGVMECWAR 9
+G + CW +
Sbjct: 1 MGDLSCWTK 9
>sp|TYSY_VZVD|THYMIDYLATE synthase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 IGVMECWAR 9
+G + CW +
Sbjct: 1 MGDLSCWTK 9
>sp|HN_PIV5L|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Human/LN)
Query: 2 GVMECWA 8
GV++ WA
Sbjct: 279 GVLDVWA 285
>sp|HN_PIV5D|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI+)
Query: 2 GVMECWA 8
GV++ WA
Sbjct: 279 GVLDVWA 285
>sp|HN_PIV5C|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI-)
Query: 2 GVMECWA 8
GV++ WA
Sbjct: 279 GVLDVWA 285
>sp|HN_PIV5|HEMAGGLUTININ-NEURAMINIDASE virus 5 (strain W3)
Query: 2 GVMECWA 8
GV++ WA
Sbjct: 279 GVLDVWA 285
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 IGVMECW 7
+G++E W
Sbjct: 1345 LGILETW 1351
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 IGVMECW 7
+G++E W
Sbjct: 1345 LGILETW 1351
>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)
Query: 4 MECWAR 9
M CW R
Sbjct: 443 MTCWRR 448
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 GVMECWA 8
G+M WA
Sbjct: 353 GLMRAWA 359
>sp|GE_HHV11|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain 17)
Query: 4 MECWAR 9
M CW R
Sbjct: 441 MTCWRR 446
>sp|GE_HHV2H|ENVELOPE glycoprotein E|Human herpesvirus 2 (strain HG52)
Query: 4 MECWAR 9
M CW R
Sbjct: 436 MTCWRR 441
151|SequenceR|760|751|LRFYQIGVME
>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 3 FYQIGVME 10
F+Q+ VME
Sbjct: 534 FHQLEVME 541
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 4 YQIGVME 10
YQ GVM+
Sbjct: 948 YQAGVMK 954
>sp|GH_EBVG|ENVELOPE glycoprotein H|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 FYQIGVM 9
FY IG M
Sbjct: 131 FYYIGTM 137
>sp|GH_EBVB9|ENVELOPE glycoprotein H|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 FYQIGVM 9
FY IG M
Sbjct: 131 FYYIGTM 137
>sp|GH_EBVA8|ENVELOPE glycoprotein H|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 FYQIGVM 9
FY IG M
Sbjct: 131 FYYIGTM 137
152|SequenceR|765|756|GLQPNLRFYQ
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GLQPNLR 7
G++PN+R
Sbjct: 1273 GIEPNIR 1279
>sp|US19_HCMVM|TRANSMEMBRANE protein US19|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LQPNLRFY 9
QP+LR Y
Sbjct: 212 FQPSLRLY 219
>sp|US19_HCMVT|TRANSMEMBRANE protein HWLF4|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 LQPNLRFY 9
QP+LR Y
Sbjct: 212 FQPSLRLY 219
>sp|US19_HCMVA|TRANSMEMBRANE protein HWLF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LQPNLRFY 9
QP+LR Y
Sbjct: 212 FQPSLRLY 219
>sp|SCP_HHV6U|SMALL capsomere-interacting protein|Human herpesvirus 6A (strain
Query: 1 GLQPNLRFY 9
GLQPN+ +
Sbjct: 37 GLQPNMASH 45
>sp|GH_EBVG|ENVELOPE glycoprotein H|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 PNLRFYQ 10
PNL YQ
Sbjct: 441 PNLALYQ 447
>sp|GH_EBVB9|ENVELOPE glycoprotein H|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 PNLRFYQ 10
PNL YQ
Sbjct: 441 PNLALYQ 447
>sp|GH_EBVA8|ENVELOPE glycoprotein H|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 PNLRFYQ 10
PNL YQ
Sbjct: 441 PNLALYQ 447
>sp|VP6_ROTB2|INTERMEDIATE capsid protein VP6|Rotavirus X (isolate
Query: 2 LQPNLRFYQ 10
L PN YQ
Sbjct: 20 LSPNTNIYQ 28
>sp|VP6_ROTJ1|INTERMEDIATE capsid protein VP6|Rotavirus X (strain
Query: 2 LQPNLRFYQ 10
L PN YQ
Sbjct: 20 LSPNTNIYQ 28
>sp|NCAP_CVH22|NUCLEOPROTEIN coronavirus 229E (HCoV-229E)
Query: 2 LQPNLRFY 9
L P L FY
Sbjct: 74 LSPKLHFY 81
>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 QPNLRFY 9
P+LR+Y
Sbjct: 342 SPDLRYY 348
>sp|CVC2_HCMVM|CAPSID vertex component 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 QPNLRFY 9
P+LR+Y
Sbjct: 336 SPDLRYY 342
>sp|VL2_HPV54|MINOR capsid protein L2|Human papillomavirus type 54
Query: 2 LQPNLRFYQ 10
L+P + F+Q
Sbjct: 316 LKPRVHFFQ 324
153|SequenceR|770|761|LMIDTGLQPN
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 1 LMIDTGLQP 9
+MID+ LQP
Sbjct: 847 IMIDSTLQP 855
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 1 LMIDTGLQP 9
+MID+ LQP
Sbjct: 849 IMIDSTLQP 857
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 1 LMIDTGLQP 9
+MID+ LQP
Sbjct: 842 IMIDSTLQP 850
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 2 MIDTGLQPN 10
MI +GLQP+
Sbjct: 924 MIQSGLQPS 932
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 2 MIDTGLQPN 10
MI +GLQP+
Sbjct: 924 MIQSGLQPS 932
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 MIDTGLQP 9
++DTGL P
Sbjct: 2072 LVDTGLGP 2079
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 MIDTGLQP 9
++DTGL P
Sbjct: 2072 LVDTGLGP 2079
>sp|VB18_VARV|ANKYRIN repeat protein B18|Variola virus
Query: 2 MIDTGLQPN 10
++D G+ PN
Sbjct: 155 LLDKGIDPN 163
>sp|VB18_VAR67|ANKYRIN repeat protein B18|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 MIDTGLQPN 10
++D G+ PN
Sbjct: 155 LLDKGIDPN 163
>sp|VB18_VACCA|ANKYRIN repeat protein B18|Vaccinia virus (strain Ankara) (VACV)
Query: 2 MIDTGLQPN 10
++D G+ PN
Sbjct: 155 LLDKGIDPN 163
>sp|VB18_VACCC|ANKYRIN repeat protein B18|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 MIDTGLQPN 10
++D G+ PN
Sbjct: 155 LLDKGIDPN 163
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 3 IDTGLQPN 10
+D GL PN
Sbjct: 1203 LDLGLPPN 1210
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 1 LMIDTGL 7
L+IDTG+
Sbjct: 816 LLIDTGV 822
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 1 LMIDTGL 7
L+IDTG+
Sbjct: 809 LLIDTGV 815
>sp|PAP_HHV8P|DNA polymerase processivity factor|Human herpesvirus 8 type P
Query: 4 DTGLQP 9
DTG QP
Sbjct: 118 DTGAQP 123
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 3 IDTGLQPN 10
+D G +PN
Sbjct: 181 LDIGAEPN 188
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 1 LMIDTGLQP 9
L +DT L P
Sbjct: 103 LSVDTDLSP 111
154|SequenceR|775|766|DSVEDLMIDT
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 2 SVEDLMIDT 10
SVED+ +DT
Sbjct: 168 SVEDIDVDT 176
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 DSVEDLMIDT 10
+ V+DLM+ T
Sbjct: 55 EPVKDLMLKT 64
>sp|VL2_HPV13|MINOR capsid protein L2|Human papillomavirus 13
Query: 2 SVEDLMIDT 10
S ED+ +DT
Sbjct: 191 STEDIPLDT 199
>sp|VL2_HPV11|MINOR capsid protein L2|Human papillomavirus 11
Query: 3 VEDLMIDT 10
VED+ +DT
Sbjct: 189 VEDIPLDT 196
155|SequenceR|780|771|NVLVTDSVED
>sp|CEP3_HHV11|CYTOPLASMIC envelopment protein 3|Human herpesvirus 1 (strain 17)
Query: 1 NVLVTDSVE 9
NVL+TD E
Sbjct: 16 NVLITDDGE 24
>sp|CEP3_HHV1K|CYTOPLASMIC envelopment protein 3|Human herpesvirus 1 (strain KOS)
Query: 1 NVLVTDSVE 9
NVL+TD E
Sbjct: 16 NVLITDDGE 24
>sp|PORTL_HHV8P|PORTAL protein|Human herpesvirus 8 type P
Query: 4 VTDSVED 10
VTD VED
Sbjct: 323 VTDVVED 329
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 1 NVLVTDSVE 9
NVL+TD E
Sbjct: 472 NVLLTDMRE 480
156|SequenceR|785|776|TEWLANVLVT
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 TEWLANVLVT 10
++WL+N+L T
Sbjct: 610 SQWLSNLLGT 619
>sp|NSP2_ROTGA|NON-STRUCTURAL protein 2|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)
Query: 1 TEWLANVL 8
T+WL N+L
Sbjct: 93 TDWLLNLL 100
>sp|VU8_HHV6Z|PROTEIN U8|Human herpesvirus 6B (strain Z29)
Query: 2 EWLANVLV 9
+W+ NVLV
Sbjct: 351 DWIDNVLV 358
>sp|U8_HHV6U|PROTEIN U8|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 EWLANVLV 9
+W+ NVLV
Sbjct: 296 DWIDNVLV 303
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 EWLANVLV 9
+W+ NVLV
Sbjct: 296 DWIDNVLV 303
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 TEWLANVLVT 10
++WL+N+L T
Sbjct: 610 SQWLSNLLGT 619
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 2 EWLANVLVT 10
+W ++VLVT
Sbjct: 899 DWQSDVLVT 907
>sp|RDRP_I96A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I47A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Fort
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I67A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I81A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I61A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I77AD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I01A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I88A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I82A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I34A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Puerto
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I18A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Brevig
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I000X|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/X-31
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I85A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I80A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I78A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I73A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I70A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I68A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I57A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I45A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I43A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I40A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I36A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I06A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I03A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I02A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I57A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I35A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I01A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I00A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I60A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Ann
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I02A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I71A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I68A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I57A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I57A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I33A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I05A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I03A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I97A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I97A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I69A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I67A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I57A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I02A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I68A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|RDRP_I01A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|SHDAG_HDVS2|SMALL delta antigen|Hepatitis delta virus genotype I
Query: 3 WLANVL 8
WL N+L
Sbjct: 51 WLGNIL 56
>sp|RDRP_I01A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW NVL
Sbjct: 331 EWFRNVL 337
>sp|LHDAG_HDVS2|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 3 WLANVL 8
WL N+L
Sbjct: 51 WLGNIL 56
>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)
Query: 1 TEWLANVL 8
T+W N+L
Sbjct: 46 TDWFRNIL 53
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 2 EWLAN 6
EW+AN
Sbjct: 1118 EWIAN 1122
>sp|RDRP_I96A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW N+L
Sbjct: 331 EWFRNIL 337
>sp|RDRP_I83A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW N+L
Sbjct: 331 EWFRNIL 337
>sp|RDRP_I73A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW N+L
Sbjct: 331 EWFRNIL 337
>sp|RDRP_I96A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW N+L
Sbjct: 331 EWFRNIL 337
>sp|RDRP_I77A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW N+L
Sbjct: 331 EWFRNIL 337
>sp|RDRP_I80AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW N+L
Sbjct: 331 EWFRNIL 337
>sp|RDRP_I51A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW N+L
Sbjct: 331 EWFRNIL 337
>sp|RDRP_I07A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW N+L
Sbjct: 331 EWFRNIL 337
>sp|RDRP_I00A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/New
Query: 2 EWLANVL 8
EW N+L
Sbjct: 331 EWFRNIL 337
>sp|RDRP_I78A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW N+L
Sbjct: 331 EWFRNIL 337
>sp|RDRP_I78A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW N+L
Sbjct: 331 EWFRNIL 337
>sp|RDRP_I77AB|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW N+L
Sbjct: 331 EWFRNIL 337
>sp|RDRP_I77AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW N+L
Sbjct: 331 EWFRNIL 337
>sp|RDRP_I76A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW N+L
Sbjct: 331 EWFRNIL 337
>sp|RDRP_I56A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW N+L
Sbjct: 331 EWFRNIL 337
>sp|RDRP_I54A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW N+L
Sbjct: 331 EWFRNIL 337
>sp|RDRP_I93A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW N+L
Sbjct: 331 EWFRNIL 337
>sp|RDRP_I88A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW N+L
Sbjct: 331 EWFRNIL 337
>sp|RDRP_I83A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 2 EWLANVL 8
EW N+L
Sbjct: 331 EWFRNIL 337
>sp|RDRP_I80A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW N+L
Sbjct: 331 EWFRNIL 337
>sp|RDRP_I79A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW N+L
Sbjct: 331 EWFRNIL 337
>sp|RDRP_I75A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW N+L
Sbjct: 331 EWFRNIL 337
>sp|RDRP_I75A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW N+L
Sbjct: 331 EWFRNIL 337
>sp|RDRP_I73A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Port
Query: 2 EWLANVL 8
EW N+L
Sbjct: 331 EWFRNIL 337
>sp|RDRP_I72A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW N+L
Sbjct: 331 EWFRNIL 337
>sp|RDRP_I72A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW N+L
Sbjct: 331 EWFRNIL 337
>sp|RDRP_I72A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW N+L
Sbjct: 331 EWFRNIL 337
>sp|RDRP_I59A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EWLANVL 8
EW N+L
Sbjct: 331 EWFRNIL 337
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 2 EWLAN 6
EW+AN
Sbjct: 1119 EWIAN 1123
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 WLANVLV 9
WL N++V
Sbjct: 2825 WLGNIIV 2831
>sp|VP4_ROTH6|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 WLANVLV 9
WLA +LV
Sbjct: 102 WLATILV 108
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 2 EWLANVLVT 10
EW A LVT
Sbjct: 263 EWSAAPLVT 271
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 2 EWLANVLVT 10
EW A LVT
Sbjct: 263 EWSAAPLVT 271
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 2 EWLANVLVT 10
EW A LVT
Sbjct: 263 EWSAAPLVT 271
157|SequenceR|790|781|YIYVETEWLA
>sp|VIRF2_HHV8P|VIRAL IRF2-like protein|Human herpesvirus 8 type P
Query: 3 YVETEWL 9
Y E+EWL
Sbjct: 4 YTESEWL 10
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 2 IYVETE 7
+YVETE
Sbjct: 2508 LYVETE 2513
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 2 IYVETE 7
+YVETE
Sbjct: 2508 LYVETE 2513
>sp|HEMA_I85A6|HEMAGGLUTININ A virus (strain A/Starling/Victoria/5156/1985
Query: 3 YVETEWL 9
Y E +WL
Sbjct: 155 YAEMKWL 161
>sp|HEMA_I85A3|HEMAGGLUTININ A virus (strain A/Chicken/Victoria/1/1985
Query: 3 YVETEWL 9
Y E +WL
Sbjct: 155 YAEMKWL 161
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 3 YVETEWL 9
Y E +WL
Sbjct: 155 YAEMKWL 161
>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New
Query: 3 YVETEWL 9
Y E +WL
Sbjct: 155 YAEMKWL 161
>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao
Query: 3 YVETEWL 9
Y E +WL
Sbjct: 155 YAEMKWL 161
>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973
Query: 3 YVETEWL 9
Y E +WL
Sbjct: 155 YAEMKWL 161
>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973
Query: 3 YVETEWL 9
Y E +WL
Sbjct: 155 YAEMKWL 161
>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972
Query: 3 YVETEWL 9
Y E +WL
Sbjct: 155 YAEMKWL 161
>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966
Query: 3 YVETEWL 9
Y E +WL
Sbjct: 155 YAEMKWL 161
>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964
Query: 3 YVETEWL 9
Y E +WL
Sbjct: 155 YAEMKWL 161
>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964
Query: 3 YVETEWL 9
Y E +WL
Sbjct: 155 YAEMKWL 161
>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963
Query: 3 YVETEWL 9
Y E +WL
Sbjct: 155 YAEMKWL 161
>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956
Query: 3 YVETEWL 9
Y E +WL
Sbjct: 155 YAEMKWL 161
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 3 YVETEWL 9
Y E +WL
Sbjct: 155 YAEMKWL 161
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 3 YVETEW 8
Y E EW
Sbjct: 372 YTEREW 377
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 YIYVETEWL 9
Y Y++ WL
Sbjct: 2419 YSYLQLRWL 2427
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 3 YVETEW 8
Y E EW
Sbjct: 375 YTEREW 380
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 YIYVETEWL 9
+IY T W+
Sbjct: 3268 FIYTNTIWI 3276
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 YIYVETEWL 9
+IY T W+
Sbjct: 3268 FIYTNTIWI 3276
158|SequenceR|795|786|EERHEYIYVE
>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 ERHEYIYVE 10
ERHE Y E
Sbjct: 27 ERHENFYAE 35
>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 ERHEYIYVE 10
ERHE Y E
Sbjct: 27 ERHENFYAE 35
>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 ERHEYIYVE 10
ERHE Y E
Sbjct: 27 ERHENFYAE 35
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 2 ERHEYIY 8
E+HEY Y
Sbjct: 260 EKHEYTY 266
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 HEYIYVE 10
H YIYVE
Sbjct: 603 HIYIYVE 609
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 4 HEYIY 8
HEY+Y
Sbjct: 665 HEYVY 669
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 4 HEYIY 8
HEY+Y
Sbjct: 665 HEYVY 669
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 4 HEYIY 8
HEY+Y
Sbjct: 665 HEYVY 669
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 4 HEYIY 8
HEY+Y
Sbjct: 665 HEYVY 669
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 4 HEYIY 8
HEY+Y
Sbjct: 665 HEYVY 669
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 4 HEYIYVE 10
H YIYVE
Sbjct: 280 HIYIYVE 286
>sp|AN_EBVG|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 RHEYIY 8
RH Y Y
Sbjct: 351 RHNYFY 356
>sp|AN_EBVB9|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 RHEYIY 8
RH Y Y
Sbjct: 351 RHNYFY 356
>sp|AN_EBVA8|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 RHEYIY 8
RH Y Y
Sbjct: 351 RHNYFY 356
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 EERHEYIY 8
++RH+++Y
Sbjct: 1932 KDRHQFVY 1939
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 EERHEYIY 8
++RH+++Y
Sbjct: 1932 KDRHQFVY 1939
>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)
Query: 1 EERHEYIYVE 10
+ RH+ +YV+
Sbjct: 405 KSRHDILYVQ 414
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 2 ERHEYIYVE 10
+R +Y++VE
Sbjct: 939 DRIQYVFVE 947
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 2 ERHEYIYVE 10
+R +Y++VE
Sbjct: 939 DRIQYVFVE 947
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 2 ERHEYIYVE 10
+R +Y++VE
Sbjct: 939 DRIQYVFVE 947
>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 EERHEYIYVE 10
+ RH+ +YV+
Sbjct: 405 KSRHDILYVQ 414
>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)
Query: 1 EERHEYIYVE 10
+ RH+ +YV+
Sbjct: 405 KSRHDILYVQ 414
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 1 EERHEYIY 8
E+R +Y+Y
Sbjct: 566 EDRWKYLY 573
>sp|AN_HHV8P|SHUTOFF alkaline exonuclease|Human herpesvirus 8 type P
Query: 3 RHEYIY 8
RH Y Y
Sbjct: 370 RHSYFY 375
>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37
Query: 1 EERHEYIY 8
EER+ Y++
Sbjct: 533 EERYRYLH 540
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 4 HEYIYVE 10
H Y+Y E
Sbjct: 657 HHYVYYE 663
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 HEYIYVE 10
H Y+Y E
Sbjct: 657 HHYVYYE 663
159|SequenceR|800|791|ILKQFEERHE
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 2 LKQFEERHE 10
L QFEE H+
Sbjct: 626 LAQFEESHQ 634
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 ILKQFEERH 9
IL +FEE H
Sbjct: 530 ILVEFEEPH 538
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 ILKQFEERH 9
IL +FEE H
Sbjct: 531 ILLEFEEPH 539
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 ILKQFEERH 9
+L +FEE H
Sbjct: 532 LLMEFEEAH 540
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 ILKQFEERH 9
+L +FEE H
Sbjct: 532 LLMEFEEAH 540
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 1 ILKQFEERH 9
+L +FEE H
Sbjct: 460 LLMEFEEAH 468
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 ILKQFEERH 9
+L +FEE H
Sbjct: 532 LLMEFEEAH 540
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 ILKQFEERH 9
+L +FEE H
Sbjct: 532 LLMEFEEAH 540
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 ILKQFEERHE 10
ILK +E+H+
Sbjct: 3053 ILKYMDEKHK 3062
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ILKQFEERH 9
ILKQ ER+
Sbjct: 337 ILKQTAERY 345
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 LKQFEERH 9
L +FEE H
Sbjct: 529 LMEFEEPH 536
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 LKQFEERH 9
L +FEE H
Sbjct: 525 LMEFEEPH 532
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 LKQFEERH 9
L +FEE H
Sbjct: 529 LMEFEEPH 536
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 LKQFEERH 9
L +FEE H
Sbjct: 524 LVEFEEAH 531
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ILKQFEERH 9
ILK F ER+
Sbjct: 751 ILKPFRERN 759
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 ILKQFEERH 9
ILK F ER+
Sbjct: 751 ILKPFRERN 759
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 ILKQFEE 7
+LKQF E
Sbjct: 399 LLKQFSE 405
160|SequenceR|806|796|PSLLLQILKQF
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 4 LLQILKQF 11
LQ+LKQF
Sbjct: 442 FLQVLKQF 449
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 4 LLQILKQF 11
LQ+LKQF
Sbjct: 446 FLQVLKQF 453
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 1 PSLLLQILKQF 11
P Q+LK+F
Sbjct: 271 PCYTFQVLKEF 281
>sp|VPAP_HCMVM|DNA polymerase processivity factor|Human cytomegalovirus (strain
Query: 1 PSLLLQILK 9
PSL+LQ ++
Sbjct: 46 PSLILQTVR 54
>sp|VPAP_HCMVA|DNA polymerase processivity factor|Human cytomegalovirus (strain
Query: 1 PSLLLQILK 9
PSL+LQ ++
Sbjct: 46 PSLILQTVR 54
THE END