NDUB7_HUMAN Blast Output
Viruses
1|Sequence|1|10|MGAHLVRRYL

>sp|LTP_GAHVM|LARGE tegument protein deneddylase|Gallid herpesvirus 2 (strain

Query: 2 GAHLVRR 8
GAHL+RR
Sbjct: 1649 GAHLLRR 1655


>sp|KR73_ICHVA|PROTEIN kinase ORF73|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 MGAHLVRRYL 10
+GAH +RY+
Sbjct: 764 LGAHGTKRYM 773


>sp|VF706_ASFWA|TERMINATION factor NPH-I homolog|African swine fever virus (isolate

Query: 1 MGAHLVRRYL 10
+G H+V R+L
Sbjct: 402 LGLHVVARFL 411


>sp|TFNPH_ASFK5|TERMINATION factor NPH-I homolog|African swine fever virus (isolate

Query: 1 MGAHLVRRYL 10
+G H+V R+L
Sbjct: 402 LGLHVVARFL 411


>sp|TFNPH_ASFP4|TERMINATION factor NPH-I homolog|African swine fever virus (isolate

Query: 1 MGAHLVRRYL 10
+G H+V R+L
Sbjct: 402 LGLHVVARFL 411


>sp|TFNPH_ASFM2|TERMINATION factor NPH-I homolog|African swine fever virus (isolate

Query: 1 MGAHLVRRYL 10
+G H+V R+L
Sbjct: 402 LGLHVVARFL 411


>sp|TFNPH_ASFB7|TERMINATION factor NPH-I homolog|African swine fever virus (strain

Query: 1 MGAHLVRRYL 10
+G H+V R+L
Sbjct: 402 LGLHVVARFL 411




2|Sequence|6|15|VRRYLGDASV

>sp|POLB_CHPVU|ORFB polyprotein|Cryphonectria hypovirus 1 (strain Euro7)

Query: 3 RYLGDASV 10
RY GDASV
Sbjct: 219 RYDGDASV 226


>sp|POLB_CHPVE|ORFB polyprotein|Cryphonectria hypovirus 1 (strain EP713)

Query: 3 RYLGDASV 10
RY GDASV
Sbjct: 219 RYDGDASV 226


>sp|VME1_IBV6|MEMBRANE protein|Avian infectious bronchitis virus (strain

Query: 1 VRRYLGDAS 9
V+RY GD S
Sbjct: 184 VQRYTGDQS 192


>sp|VME1_IBVH1|MEMBRANE protein|Avian infectious bronchitis virus (strain

Query: 1 VRRYLGDAS 9
V++Y+GD S
Sbjct: 184 VQKYIGDQS 192


>sp|VME1_IBVD1|MEMBRANE protein|Avian infectious bronchitis virus (strain

Query: 1 VRRYLGDAS 9
V++Y+GD S
Sbjct: 184 VQKYIGDQS 192


>sp|VME1_IBV41|MEMBRANE protein|Avian infectious bronchitis virus (strain

Query: 1 VRRYLGDAS 9
V++Y+GD S
Sbjct: 184 VQKYIGDQS 192


>sp|PORTL_BPHK7|PORTAL protein|Enterobacteria phage HK97 (Bacteriophage HK97)

Query: 4 YLGDASV 10
YLGD+S+
Sbjct: 46 YLGDSSI 52


>sp|NINH_BPH19|PROTEIN ninH|Enterobacteria phage H19B (Bacteriophage H19B)

Query: 1 VRRYLGD 7
VR+Y+GD
Sbjct: 33 VRKYIGD 39


>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)

Query: 1 VRRYLGDA 8
V R+LGDA
Sbjct: 326 VARFLGDA 333


>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)

Query: 1 VRRYLGDA 8
V R+LGDA
Sbjct: 331 VARFLGDA 338


>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)

Query: 1 VRRYLGDA 8
V R+LGDA
Sbjct: 333 VARFLGDA 340




3|Sequence|11|20|GDASVEPDPL

>sp|VAT_CAMVE|APHID transmission protein|Cauliflower mosaic virus (strain BBC)

Query: 2 DASVEPDPL 10
D +EP+PL
Sbjct: 127 DNKIEPEPL 135


>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 1 GDASVEPDP 9
G+ S+EP P
Sbjct: 1769 GEYSIEPSP 1777


>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 1 GDASVEPDP 9
G+ S+EP P
Sbjct: 1769 GEYSIEPSP 1777


>sp|VAT_CAMVC|APHID transmission protein|Cauliflower mosaic virus (strain CM-1841)

Query: 2 DASVEPDPL 10
D +EP+PL
Sbjct: 127 DNKIEPEPL 135


>sp|VAT_CAMVN|APHID transmission protein|Cauliflower mosaic virus (strain NY8153)

Query: 2 DASVEPDPL 10
D +EP+PL
Sbjct: 127 DNKIEPEPL 135


>sp|VAT_CAMVD|APHID transmission protein|Cauliflower mosaic virus (strain D/H)

Query: 2 DASVEPDPL 10
D +EP+PL
Sbjct: 127 DEKIEPEPL 135


>sp|RIR1_ALHV1|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 GDASVEPDPL 10
GD ++ P+PL
Sbjct: 650 GDVALFPEPL 659


>sp|009L_FRG3G|PUTATIVE helicase 009L|Frog virus 3 (isolate Goorha)

Query: 2 DASVEPDPL 10
+ SVEP PL
Sbjct: 587 NVSVEPGPL 595


>sp|DNB2_ADE41|DNA-BINDING protein|Human adenovirus F serotype 41

Query: 1 GDASVEP 7
GDA VEP
Sbjct: 467 GDAEVEP 473




4|Sequence|16|25|EPDPLQMPTF

>sp|KIT_FSVHZ|TYROSINE-PROTEIN kinase transforming protein kit|Feline sarcoma virus (strain

Query: 1 EPDPLQMPTF 10
+ DPL+ PTF
Sbjct: 346 DADPLKRPTF 355


>sp|UBPL2_MIMIV|PUTATIVE ubiquitin carboxyl-terminal hydrolase L293|Acanthamoeba polyphaga

Query: 1 EPDPLQM 7
EPDP+QM
Sbjct: 215 EPDPVQM 221


>sp|POLB_CHPVU|ORFB polyprotein|Cryphonectria hypovirus 1 (strain Euro7)

Query: 1 EPDPLQMPT 9
E DPL++PT
Sbjct: 328 EVDPLRLPT 336


>sp|VNS4_AQRVC|NON-STRUCTURAL protein 4|Aquareovirus C (isolate Golden shiner/USA/GSRV/1977)

Query: 4 PLQMPTF 10
PLQ+PTF
Sbjct: 40 PLQIPTF 46


>sp|L_LBVAV|RNA-DIRECTED RNA polymerase L|Lettuce big-vein associated virus (isolate

Query: 2 PDPLQMPTF 10
PD ++ PTF
Sbjct: 1719 PDDIRKPTF 1727


>sp|YL417_MIMIV|UNCHARACTERIZED protein L417|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 PDPLQMP 8
P P+QMP
Sbjct: 219 PSPMQMP 225


>sp|HN_MUMP1|HEMAGGLUTININ-NEURAMINIDASE virus (strain SBL-1) (MuV)

Query: 3 DPLQMPTF 10
+PL MP+F
Sbjct: 161 NPLNMPSF 168


>sp|EXOD_BPT4|EXODEOXYRIBONUCLEASE phage T4 (Bacteriophage T4)

Query: 1 EPDPLQMPT 9
E DPL +PT
Sbjct: 217 ECDPLSLPT 225


>sp|KITH_EHV2|THYMIDINE kinase|Equine herpesvirus 2 (strain 86/87)

Query: 2 PDPLQMPTF 10
P+PL PTF
Sbjct: 189 PEPLGHPTF 197


>sp|R1A_WBV24|REPLICASE polyprotein 1a|White bream virus (isolate Blicca

Query: 1 EPDPLQMPTF 10
PD +Q PT+
Sbjct: 4348 SPDNVQFPTY 4357


>sp|REV_HV193|PROTEIN Rev|Human immunodeficiency virus type 1

Query: 1 EPDPLQMP 8
EP PLQ+P
Sbjct: 69 EPVPLQLP 76




5|Sequence|21|30|QMPTFPPDYG

>sp|VP2_ROTTU|INNER capsid protein VP2|Rotavirus A (isolate RVA/Monkey/United

Query: 1 QMPTFPPDY 9
Q PT P DY
Sbjct: 524 QFPTMPVDY 532


>sp|VP2_ROTHD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United

Query: 1 QMPTFPPDY 9
Q PT P DY
Sbjct: 516 QFPTMPVDY 524


>sp|VP2_ROTHS|INNER capsid protein VP2|Rotavirus A (strain

Query: 1 QMPTFPPDY 9
Q PT P DY
Sbjct: 516 QFPTMPVDY 524


>sp|VP2_ROTH3|INNER capsid protein VP2|Rotavirus A (strain

Query: 1 QMPTFPPDY 9
Q PT P DY
Sbjct: 524 QFPTMPVDY 532


>sp|VP2_ROTHL|INNER capsid protein VP2|Rotavirus A (strain

Query: 1 QMPTFPPDY 9
Q PT P DY
Sbjct: 516 QFPTMPVDY 524


>sp|VP2_ROTRF|INNER capsid protein VP2|Rotavirus A (strain

Query: 1 QMPTFPPDY 9
Q PT P DY
Sbjct: 517 QFPTMPVDY 525


>sp|VP2_ROTH6|INNER capsid protein VP2|Rotavirus A (strain

Query: 1 QMPTFPPDY 9
Q PT P DY
Sbjct: 517 QFPTMPVDY 525


>sp|VP2_ROTBN|INNER capsid protein VP2|Rotavirus A (strain RVA/Cow/United

Query: 1 QMPTFPPDY 9
Q PT P DY
Sbjct: 517 QFPTMPVDY 525


>sp|VP2_ROT41|INNER capsid protein VP2|Rotavirus A (isolate

Query: 1 QMPTFPPDY 9
Q PT P DY
Sbjct: 517 QFPTMPVDY 525


>sp|VP2_ROTW3|INNER capsid protein VP2|Rotavirus A (strain RVA/Cow/United

Query: 1 QMPTFPPDY 9
Q PT P DY
Sbjct: 517 QFPTMPVDY 525


>sp|VP2_ROTH7|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United

Query: 1 QMPTFPPDY 9
Q PT P DY
Sbjct: 517 QFPTMPVDY 525


>sp|VP2_ROTBU|INNER capsid protein VP2|Rotavirus A (strain RVA/Cow/United

Query: 1 QMPTFPPDY 9
Q PT P DY
Sbjct: 518 QFPTMPVDY 526


>sp|VP2_ROTSR|INNER capsid protein VP2|Rotavirus A (strain RVA/SA11-Ramig/G3P[X])

Query: 1 QMPTFPPDY 9
Q PT P DY
Sbjct: 519 QFPTMPVDY 527


>sp|VP2_ROTSH|INNER capsid protein VP2|Rotavirus A (isolate RVA/Monkey/South

Query: 1 QMPTFPPDY 9
Q PT P DY
Sbjct: 519 QFPTMPVDY 527


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 1 QMPTFPPDYG 10
Q+ FPPD G
Sbjct: 1587 QVHAFPPDSG 1596


>sp|VP2_ROTWI|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United

Query: 1 QMPTFPPDY 9
Q PT P DY
Sbjct: 527 QFPTMPVDY 535


>sp|VP2_ROTS1|INNER capsid protein VP2|Rotavirus A (strain RVA/SA11-Both/G3P5B[2])

Query: 1 QMPTFPPDY 9
Q PT P DY
Sbjct: 518 QFPTMPVDY 526


>sp|VP2_ROTHW|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United

Query: 1 QMPTFPPDY 9
Q PT P DY
Sbjct: 527 QFPTMPVDY 535


>sp|VP2_ROTAD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United

Query: 1 QMPTFPPDY 9
Q PT P DY
Sbjct: 527 QFPTMPVDY 535


>sp|VP2_ROTHK|INNER capsid protein VP2|Rotavirus A (strain

Query: 1 QMPTFPPDY 9
Q PT P DY
Sbjct: 529 QFPTMPVDY 537


>sp|VP2_ROTYO|INNER capsid protein VP2|Rotavirus A (strain

Query: 1 QMPTFPPDY 9
Q PT P DY
Sbjct: 527 QFPTMPVDY 535


>sp|VP2_ROTHT|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United

Query: 1 QMPTFPPDY 9
Q PT P DY
Sbjct: 527 QFPTMPVDY 535


>sp|VP2_ROTHP|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United

Query: 1 QMPTFPPDY 9
Q PT P DY
Sbjct: 533 QFPTMPVDY 541


>sp|ENV_VILVK|ENVELOPE glycoprotein gp160|Maedi visna virus (strain KV1772)

Query: 1 QMPTFPPDY 9
QMPT DY
Sbjct: 972 QMPTLENDY 980


>sp|ENV_VILV2|ENVELOPE glycoprotein gp160|Maedi visna virus (strain 1514

Query: 1 QMPTFPPDY 9
QMPT DY
Sbjct: 980 QMPTLENDY 988


>sp|ENV_VILV1|ENVELOPE glycoprotein gp160|Maedi visna virus (strain 1514

Query: 1 QMPTFPPDY 9
QMPT DY
Sbjct: 978 QMPTLENDY 986


>sp|ENV_VILV|ENVELOPE glycoprotein gp160|Maedi visna virus (strain 1514)

Query: 1 QMPTFPPDY 9
QMPT DY
Sbjct: 971 QMPTLENDY 979


>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3

Query: 3 PTFPPDY 9
P FPP Y
Sbjct: 543 PKFPPTY 549


>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 3 PTFPPDY 9
P FPP Y
Sbjct: 549 PKFPPSY 555


>sp|POL2_ARMV|RNA2 polyprotein|Arabis mosaic virus (ArMV)

Query: 2 MPTFPPDY 9
+P+FP DY
Sbjct: 342 VPSFPNDY 349


>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1

Query: 3 PTFPPDY 9
P FPP Y
Sbjct: 549 PKFPPTY 555


>sp|ENV_SFVCP|ENVELOPE glycoprotein gp130|Simian foamy virus (isolate chimpanzee)

Query: 3 PTFPPDY 9
P FPP Y
Sbjct: 548 PKFPPSY 554


>sp|POL2_ARMVN|RNA2 polyprotein|Arabis mosaic virus (isolate NW)

Query: 2 MPTFPPDY 9
+P+FP DY
Sbjct: 946 VPSFPNDY 953


>sp|POL2_ARMVS|RNA2 polyprotein|Arabis mosaic virus (isolate Syrah)

Query: 2 MPTFPPDY 9
+P+FP DY
Sbjct: 967 VPSFPNDY 974


>sp|MCEL_RFVKA|MRNA-CAPPING enzyme catalytic subunit|Rabbit fibroma virus (strain Kasza)

Query: 5 FPPDYG 10
FP DYG
Sbjct: 429 FPKDYG 434


>sp|RDRP_GLVWB|PROBABLE RNA-directed RNA polymerase|Giardia lamblia virus (isolate Wang)

Query: 3 PTFPPDYG 10
PTFP YG
Sbjct: 153 PTFPYSYG 160


>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)

Query: 3 PTFPPDY 9
PT PP Y
Sbjct: 1644 PTVPPTY 1650


>sp|POLG_GBVB|GENOME polyprotein|Hepatitis GB virus B (GBV-B)

Query: 1 QMPTFPPDY 9
+ P FPP Y
Sbjct: 2329 RQPLFPPSY 2337


>sp|CAPSD_GLVWB|MAJOR capsid protein|Giardia lamblia virus (isolate Wang)

Query: 3 PTFPPDYG 10
PTFP YG
Sbjct: 153 PTFPYSYG 160


>sp|YR188_MIMIV|UNCHARACTERIZED protein R188|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 PTFPPDY 9
PTFP D+
Sbjct: 164 PTFPEDW 170


>sp|YR722_MIMIV|UNCHARACTERIZED protein R722|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 QMPTFPPDY 9
Q TFPP Y
Sbjct: 655 QQTTFPPRY 663


>sp|Y035_HIS1I|UNCHARACTERIZED protein ORF35|His1 virus (isolate Australia/Victoria) (His1V)

Query: 5 FPPDYG 10
FP DYG
Sbjct: 48 FPEDYG 53


>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3 PTFPPDYG 10
P FPP+ G
Sbjct: 370 PAFPPNTG 377




6|Sequence|26|35|PPDYGFPERK

>sp|PTPH2_MDBVW|TYROSINE phosphatase H2|Microplitis demolitor bracovirus (isolate Webb)

Query: 2 PDYGFP 7
PDYG P
Sbjct: 189 PDYGVP 194


>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 PDYGFP 7
P YGFP
Sbjct: 701 PSYGFP 706


>sp|V240_FOWPN|PUTATIVE ankyrin repeat protein FPV240|Fowlpox virus (strain NVSL) (FPV)

Query: 2 PDYGFPE 8
PDY +P+
Sbjct: 60 PDYNYPD 66


>sp|VG54_ICHVA|UNCHARACTERIZED protein ORF54|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 PDYGFPER 9
PDYGF R
Sbjct: 577 PDYGFNVR 584


>sp|TIP_SHV24|TYROSINE-PROTEIN kinase-interacting protein|Saimiriine herpesvirus 2 (strain 484-77)

Query: 1 PPDYGFPER 9
PPDY P+R
Sbjct: 114 PPDYRKPKR 122


>sp|AGNO_POVBO|BOVINE agnoprotein|Bovine polyomavirus (BPyV) (Bos taurus

Query: 4 YGFPE 8
YGFPE
Sbjct: 78 YGFPE 82


>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)

Query: 3 DYGFPE 8
+YGFPE
Sbjct: 460 NYGFPE 465


>sp|RIR2_HHV1K|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain KOS)

Query: 1 PPDYGFP 7
PPD FP
Sbjct: 306 PPDASFP 312


>sp|RIR2_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain 17)

Query: 1 PPDYGFP 7
PPD FP
Sbjct: 306 PPDASFP 312


>sp|TIP_SHV48|TYROSINE protein kinase-interacting protein|Saimiriine herpesvirus 2 (strain

Query: 1 PPDYGFPER 9
PPDY P+R
Sbjct: 165 PPDYRKPKR 173


>sp|TIP_SHV2C|TYROSINE-PROTEIN kinase-interacting protein|Saimiriine herpesvirus 2 (strain 488)

Query: 1 PPDYGFPER 9
PPD+ P+R
Sbjct: 156 PPDFRKPKR 164


>sp|ME53_NPVOP|EARLY 53 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 PPDYGF 6
PP+YGF
Sbjct: 74 PPEYGF 79


>sp|DIPP_MIMIV|PUTATIVE mRNA-decapping protein|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 PDYGFPE 8
P++GFP+
Sbjct: 235 PEWGFPK 241


>sp|ORF2_PSHV1|UNCHARACTERIZED protein sORF2|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 PPDYGFPER 9
P DYG P R
Sbjct: 912 PNDYGTPAR 920


>sp|RDRP_AHV2H|RNA-DIRECTED RNA polymerase|Atkinsonella hypoxylon virus (isolate 2H)

Query: 3 DYGFPERK 10
+YGFP R
Sbjct: 532 NYGFPTRS 539


>sp|PORTL_BPTWO|PROBABLE portal protein|Staphylococcus phage Twort (strain DSM

Query: 1 PPDYGFPER 9
P + GFP R
Sbjct: 365 PAEIGFPNR 373




7|Sequence|31|40|FPERKEREMV

>sp|RPB1_IIV3|PROBABLE DNA-directed RNA polymerase II|Invertebrate iridescent virus 3

Query: 1 FPERKEREM 9
+PERK+ E+
Sbjct: 430 YPERKQIEL 438




8|Sequence|36|45|EREMVATQQE

***** No hits found ******


9|Sequence|41|50|ATQQEMMDAQ

***** No hits found ******


10|Sequence|46|55|MMDAQLRLQL

>sp|POL_BIV29|GAG-POL polyprotein|Bovine immunodeficiency virus (strain R29)

Query: 1 MMDAQLRLQL 10
M+D++L+LQL
Sbjct: 1168 MVDSELQLQL 1177


>sp|CVC2_VZVD|CAPSID vertex component 2|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 MMDAQLRLQL 10
+MDA +RLQ+
Sbjct: 310 VMDALIRLQV 319




11|Sequence|51|60|LRLQLRDYCA

>sp|ENLYS_BPSH5|ENDOLYSIN LysH5|Staphylococcus phage phiH5 (Bacteriophage phiH5)

Query: 2 RLQLRDY 8
RLQL+DY
Sbjct: 345 RLQLKDY 351


>sp|ENLYS_BPPHA|ENDOLYSIN LytA|Staphylococcus phage phi11 (Bacteriophage phi-11)

Query: 2 RLQLRDY 8
RLQL+DY
Sbjct: 345 RLQLKDY 351


>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)

Query: 4 QLRDYC 9
+LRDYC
Sbjct: 1493 ELRDYC 1498


>sp|POLN_TYMVC|NON-STRUCTURAL replication polyprotein|Turnip yellow mosaic virus (isolate

Query: 4 QLRDYC 9
QLRD+C
Sbjct: 1559 QLRDWC 1564


>sp|POLN_TYMVA|NON-STRUCTURAL replication polyprotein|Turnip yellow mosaic virus (isolate

Query: 4 QLRDYC 9
QLRD+C
Sbjct: 1559 QLRDWC 1564


>sp|POLN_TYMV|NON-STRUCTURAL replication polyprotein|Turnip yellow mosaic virus

Query: 4 QLRDYC 9
QLRD+C
Sbjct: 1559 QLRDWC 1564


>sp|VF022_IIV3|PUTATIVE helicase 087L|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 LRLQLRDYCA 10
LRL LR Y A
Sbjct: 363 LRLNLRKYSA 372


>sp|LEF9_NPVOP|LATE expression factor 9|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 LRLQLRDYC 9
L L LRD+C
Sbjct: 338 LELLLRDFC 346


>sp|LEF9_NPVAC|DNA-DIRECTED RNA polymerase subunit LEF-9|Autographa californica nuclear

Query: 1 LRLQLRDYC 9
L + LRD+C
Sbjct: 365 LEMLLRDFC 373


>sp|PG056_VAR67|PROTEIN OPG056|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3 LQLRDYC 9
L L+DYC
Sbjct: 330 LSLQDYC 336


>sp|PG056_VACCW|PROTEIN OPG056|Vaccinia virus (strain Western Reserve)

Query: 3 LQLRDYC 9
L L+DYC
Sbjct: 330 LSLQDYC 336


>sp|PG056_VACCP|PROTEIN OPG056|Vaccinia virus (strain L-IVP) (VACV)

Query: 3 LQLRDYC 9
L L+DYC
Sbjct: 330 LSLQDYC 336


>sp|PG056_VACCC|PROTEIN OPG056|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 LQLRDYC 9
L L+DYC
Sbjct: 330 LSLQDYC 336


>sp|PG056_VACCA|PROTEIN OPG056|Vaccinia virus (strain Ankara) (VACV)

Query: 3 LQLRDYC 9
L L+DYC
Sbjct: 330 LSLQDYC 336


>sp|PG056_MONPV|PROTEIN OPG056|Monkeypox virus (MPXV)

Query: 3 LQLRDYC 9
L L+DYC
Sbjct: 330 LSLQDYC 336


>sp|PG056_CAMPM|PROTEIN OPG056|Camelpox virus (strain M-96)

Query: 3 LQLRDYC 9
L L+DYC
Sbjct: 330 LSLQDYC 336




12|Sequence|56|65|RDYCAHHLIR

>sp|ORFB_PSHV1|UNCHARACTERIZED protein ORFB|Psittacid herpesvirus 1 (isolate Amazon

Query: 3 YCAHHLI 9
+CAHH+I
Sbjct: 287 FCAHHII 293


>sp|DPOL_WMHBV|PROTEIN P|Woolly monkey hepatitis B virus

Query: 2 DYCAHHLIR 10
D+C HH+++
Sbjct: 324 DHCLHHIVK 332


>sp|POLG_ZYMVS|GENOME polyprotein|Zucchini yellow mosaic virus (strain

Query: 1 RDYCAHHL 8
RD+ AHH+
Sbjct: 1756 RDHTAHHI 1763


>sp|DPOL_WHV6|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 3 YCAHHLI 9
YC HH++
Sbjct: 50 YCIHHIV 56


>sp|DPOL_WHV3|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 3 YCAHHLI 9
YC HH++
Sbjct: 378 YCIHHIV 384


>sp|DPOL_ASHV|PROTEIN P|Arctic squirrel hepatitis virus (ASHV)

Query: 3 YCAHHLI 9
YC HH++
Sbjct: 373 YCLHHIV 379


>sp|GRAN_GVXN|GRANULIN c-nigrum granulosis virus (XnGV)

Query: 2 DYCAHHLIR 10
DY AH +IR
Sbjct: 149 DYVAHDVIR 157


>sp|GRAN_GVTN|GRANULIN ni granulosis virus (TnGV)

Query: 2 DYCAHHLIR 10
DY AH +IR
Sbjct: 149 DYVAHDVIR 157


>sp|DPOL_WHV4|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 3 YCAHHLI 9
YC HH++
Sbjct: 378 YCIHHIV 384


>sp|DPOL_WHV2|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 3 YCAHHLI 9
YC HH++
Sbjct: 377 YCIHHIV 383


>sp|DPOL_WHV1|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 3 YCAHHLI 9
YC HH++
Sbjct: 373 YCIHHIV 379


>sp|DPOL_WHV5|PROTEIN P|Woodchuck hepatitis B virus (isolate

Query: 3 YCAHHLI 9
YC HH++
Sbjct: 378 YCIHHIV 384


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 1 RDYCAHHLIR 10
R YC H+ +R
Sbjct: 483 RPYCWHYALR 492


>sp|POLN_TYMV|NON-STRUCTURAL replication polyprotein|Turnip yellow mosaic virus

Query: 1 RDYCAHHL 8
RD+C HL
Sbjct: 1561 RDWCQEHL 1568


>sp|POLN_TYMVC|NON-STRUCTURAL replication polyprotein|Turnip yellow mosaic virus (isolate

Query: 1 RDYCAHHL 8
RD+C HL
Sbjct: 1561 RDWCQEHL 1568


>sp|POLN_TYMVA|NON-STRUCTURAL replication polyprotein|Turnip yellow mosaic virus (isolate

Query: 1 RDYCAHHL 8
RD+C HL
Sbjct: 1561 RDWCQEHL 1568


>sp|DPOL_GSHV|PROTEIN P|Ground squirrel hepatitis virus (strain

Query: 3 YCAHHLI 9
YC HH++
Sbjct: 375 YCLHHIV 381


>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G

Query: 2 DYCAHHLI 9
DYC HL+
Sbjct: 335 DYCLSHLV 342


>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G

Query: 2 DYCAHHLI 9
DYC HL+
Sbjct: 335 DYCLSHLV 342


>sp|VF233_ASFK5|UNCHARACTERIZED protein H233R|African swine fever virus (isolate

Query: 1 RDYCAHHL 8
RDY A HL
Sbjct: 225 RDYIAQHL 232


>sp|POLG_ZYMVC|GENOME polyprotein|Zucchini yellow mosaic virus (strain

Query: 1 RDYCAHHL 8
RDY AH++
Sbjct: 1753 RDYTAHNI 1760


>sp|GRAN_GVCPM|GRANULIN pomonella granulosis virus (isolate

Query: 2 DYCAHHLIR 10
DY AH +IR
Sbjct: 149 DYVAHDVIR 157


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 3 YCAHHLIR 10
+C+HH R
Sbjct: 3218 FCSHHFHR 3225


>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)

Query: 1 RDYCAHHLI 9
RD+CA L+
Sbjct: 1205 RDFCARALL 1213


>sp|GRAN_GVAS|GRANULIN segetum granulosis virus (AsGV)

Query: 2 DYCAHHLIR 10
DY AH +IR
Sbjct: 148 DYVAHDVIR 156


>sp|GRAN_GVHB|GRANULIN brillians granulovirus (HbGV)

Query: 2 DYCAHHLIR 10
DY AH +IR
Sbjct: 149 DYIAHDVIR 157


>sp|NCAP_EMARV|NUCLEOPROTEIN mountain ash ringspot-associated virus

Query: 2 DYCAHHLIR 10
D CA HL R
Sbjct: 93 DACASHLSR 101


>sp|DPOL_HBVGB|PROTEIN P|Gibbon hepatitis B virus subtype

Query: 2 DYCAHHLI 9
DYC HL+
Sbjct: 325 DYCLSHLV 332


>sp|TEG7_ELHVK|TEGUMENT protein UL51 homolog|Elephantid herpesvirus 1 (isolate Asian

Query: 1 RDYCAHHL 8
+D CA HL
Sbjct: 79 KDTCAEHL 86


>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1

Query: 2 DYCAHHLI 9
DYC H+I
Sbjct: 336 DYCLSHII 343


>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E

Query: 2 DYCAHHLI 9
DYC HL+
Sbjct: 335 DYCLSHLV 342


>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1

Query: 2 DYCAHHLI 9
DYC H+I
Sbjct: 336 DYCLSHII 343


>sp|YR748_MIMIV|PUTATIVE ankyrin repeat protein R748|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 RDYCAHHLI 9
RD C H+L+
Sbjct: 295 RDQCIHYLL 303


>sp|GRAN_GVAO|GRANULIN orana granulovirus (AoGV)

Query: 2 DYCAHHLIR 10
DY AH +IR
Sbjct: 149 DYVAHDVIR 157


>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H

Query: 2 DYCAHHLI 9
DYC H+I
Sbjct: 336 DYCLSHII 343


>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H

Query: 2 DYCAHHLI 9
DYC H+I
Sbjct: 336 DYCLSHII 343


>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2

Query: 2 DYCAHHLI 9
DYC H+I
Sbjct: 336 DYCLSHII 343


>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2

Query: 2 DYCAHHLI 9
DYC H+I
Sbjct: 336 DYCLSHII 343


>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2

Query: 2 DYCAHHLI 9
DYC H+I
Sbjct: 336 DYCLSHII 343


>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E

Query: 2 DYCAHHLI 9
DYC HL+
Sbjct: 335 DYCLTHLV 342


>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E

Query: 2 DYCAHHLI 9
DYC HL+
Sbjct: 335 DYCLTHLV 342


>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H

Query: 2 DYCAHHLI 9
DYC H+I
Sbjct: 336 DYCLSHII 343


>sp|GRAN_GVCL|GRANULIN leucotreta granulosis virus (ClGV)

Query: 2 DYCAHHLIR 10
DY AH +IR
Sbjct: 149 DYVAHDVIR 157


>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E

Query: 2 DYCAHHLI 9
DYC HL+
Sbjct: 335 DYCLTHLV 342


>sp|POLG_MCFA|GENOME polyprotein|Mosquito cell fusing agent (CFA

Query: 2 DYCAHH 7
++C+HH
Sbjct: 3147 EFCSHH 3152


>sp|PRIM_EHV1V|DNA primase|Equine herpesvirus 1 (strain V592)

Query: 1 RDYCAHHL 8
RDY AH++
Sbjct: 411 RDYIAHNV 418


>sp|PRIM_EHV1B|DNA primase|Equine herpesvirus 1 (strain Ab4p)

Query: 1 RDYCAHHL 8
RDY AH++
Sbjct: 411 RDYIAHNV 418


>sp|L_BCNVU|RNA-DIRECTED RNA polymerase L|Bear Canyon mammarenavirus (isolate Mouse/United

Query: 3 YCAHHLIR 10
YC +H+ R
Sbjct: 293 YCRNHMFR 300


>sp|YR541_MIMIV|PUTATIVE BTB/POZ domain-containing protein R541|Acanthamoeba polyphaga

Query: 1 RDYCAH 6
RDYC H
Sbjct: 249 RDYCDH 254


>sp|Y457_ATV|TNPB-LIKE protein ORF457|Acidianus two-tailed virus (ATV)

Query: 3 YCAHHLIR 10
YCA+H ++
Sbjct: 392 YCAYHDVK 399


>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C

Query: 2 DYCAHHLI 9
DYC H++
Sbjct: 336 DYCLSHIV 343


>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C

Query: 2 DYCAHHLI 9
DYC H++
Sbjct: 336 DYCLSHIV 343


>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C

Query: 2 DYCAHHLI 9
DYC H++
Sbjct: 336 DYCLSHIV 343


>sp|Y098_OSHVF|UNCHARACTERIZED protein ORF98|Ostreid herpesvirus 1 (isolate France)

Query: 3 YCAHHL 8
YC HH+
Sbjct: 151 YCYHHM 156


>sp|IE0_NPVLD|IMMEDIATE-EARLY protein IE-0|Lymantria dispar multicapsid nuclear polyhedrosis

Query: 2 DYCAHHLI 9
D C HHLI
Sbjct: 91 DRCWHHLI 98




13|Sequence|61|70|HHLIRLLKCK

>sp|HELIC_BPT3|DNA helicase/primase|Enterobacteria phage T3 (Bacteriophage T3)

Query: 3 LIRLLKCK 10
L+RLLKC+
Sbjct: 514 LVRLLKCR 521


>sp|HELIC_BPT7|DNA helicase/primase|Escherichia phage T7 (Bacteriophage T7)

Query: 3 LIRLLKCK 10
L+R+LKC+
Sbjct: 515 LVRILKCR 522


>sp|L_MPV15|RNA-DIRECTED RNA polymerase L|Murine pneumonia virus (strain 15)

Query: 2 HLIRLLKC 9
H +RLLKC
Sbjct: 1861 HGVRLLKC 1868


>sp|MATRX_TAVCV|MATRIX protein|Taro vein chlorosis virus (TAVCV)

Query: 1 HHLIRLLKCK 10
HH+IR +C+
Sbjct: 69 HHIIRNKECQ 78


>sp|V224_FOWPN|PUTATIVE ankyrin repeat protein FPV224|Fowlpox virus (strain NVSL) (FPV)

Query: 1 HHLIRLLK 8
HH I LLK
Sbjct: 15 HHAINLLK 22




14|Sequence|66|75|LLKCKRDSFP

>sp|VP15_NPVAC|PUTATIVE 15 kDa capsid protein|Autographa californica nuclear polyhedrosis

Query: 1 LLKCKRDSF 9
L KCKRD++
Sbjct: 34 LEKCKRDAY 42


>sp|TRX2_SHV21|TRIPLEX capsid protein 2|Saimiriine herpesvirus 2 (strain 11)

Query: 4 CKRDSFP 10
C RD FP
Sbjct: 51 CSRDVFP 57


>sp|MVP_SBMVG|P3N-PIPO polyprotein|Soybean mosaic virus (strain G2)

Query: 3 KCKRDSFP 10
KCK+ +FP
Sbjct: 983 KCKKYTFP 990


>sp|V001_FOWPN|PUTATIVE C-type lectin protein FPV001/FPV260|Fowlpox virus (strain NVSL)

Query: 4 CKRDSF 9
CKRDSF
Sbjct: 53 CKRDSF 58


>sp|MVP_SBMVN|P3N-PIPO polyprotein|Soybean mosaic virus (strain N)

Query: 3 KCKRDSFP 10
KCK+ +FP
Sbjct: 983 KCKKYTFP 990


>sp|DPOL_ADEB2|DNA polymerase|Bovine adenovirus 2 (BAdV-2) (Mastadenovirus

Query: 3 KCKRDSF 9
KCK D+F
Sbjct: 879 KCKSDAF 885




15|Sequence|71|80|RDSFPNFLAC

>sp|VP2_BTV10|OUTER capsid protein VP2|Bluetongue virus 10 (isolate USA)

Query: 1 RDSFPNFL 8
R++FPNFL
Sbjct: 709 REAFPNFL 716


>sp|VP2_BTV17|OUTER capsid protein VP2|Bluetongue virus 17 (isolate USA)

Query: 1 RDSFPNFL 8
R +FPNF
Sbjct: 708 RSTFPNFF 715


>sp|YL205_MIMIV|PUTATIVE serine/threonine-protein kinase L205|Acanthamoeba polyphaga

Query: 2 DSFPNFLAC 10
+SF NFL C
Sbjct: 509 ESFANFLMC 517


>sp|CAPSD_TTVT1|CAPSID protein|Torque teno canis virus (isolate

Query: 2 DSFPNFLAC 10
D PNF+ C
Sbjct: 381 DPQPNFMTC 389


>sp|VL2_HPV65|MINOR capsid protein L2|Human papillomavirus 65

Query: 1 RDSFPNFLA 9
RDS PN A
Sbjct: 9 RDSIPNLYA 17


>sp|YR826_MIMIV|PUTATIVE serine/threonine-protein kinase/receptor R826|Acanthamoeba

Query: 4 FPNFLAC 10
F NFL+C
Sbjct: 512 FTNFLSC 518


>sp|EX0N_IIV3|PUTATIVE exonuclease 059L|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 RDSFPN 6
+DSFPN
Sbjct: 11 KDSFPN 16


>sp|MVP_MSTV|MOVEMENT protein|Maize stripe virus (MStV)

Query: 3 SFPNFLA 9
S PNFLA
Sbjct: 162 SLPNFLA 168




16|Sequence|76|85|NFLACKQERH

>sp|YR826_MIMIV|PUTATIVE serine/threonine-protein kinase/receptor R826|Acanthamoeba

Query: 1 NFLACKQER 9
NFL+CK ++
Sbjct: 514 NFLSCKSDK 522


>sp|R1A_PEDV7|REPLICASE polyprotein 1a|Porcine epidemic diarrhea virus (strain

Query: 2 FLACKQERH 10
FLAC +RH
Sbjct: 1423 FLACVGDRH 1431


>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain

Query: 2 FLACKQERH 10
FLAC +RH
Sbjct: 1423 FLACVGDRH 1431


>sp|POLG_CSFVB|GENOME polyprotein|Classical swine fever virus (strain

Query: 1 NFLACKQERH 10
N+ CK +RH
Sbjct: 332 NYTCCKLQRH 341


>sp|NCAP_LNYV3|NUCLEOPROTEIN necrotic yellows virus (isolate

Query: 1 NFLACKQ 7
N+LAC+Q
Sbjct: 300 NYLACQQ 306


>sp|POLG_CSFAT|GENOME polyprotein|Classical swine fever virus (strain

Query: 1 NFLACKQERH 10
N+ C+ +RH
Sbjct: 332 NYTCCRLQRH 341


>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 1 NFLACKQERH 10
N+ C+ +RH
Sbjct: 335 NYTCCRLQRH 344


>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate

Query: 1 NFLACKQERH 10
N+ C+ +RH
Sbjct: 335 NYTCCRLQRH 344


>sp|POLG_BVDVC|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 1 NFLACKQERH 10
N+ C+ +RH
Sbjct: 335 NYTCCRLQRH 344


>sp|L_TAVCV|RNA-DIRECTED RNA polymerase L|Taro vein chlorosis virus (TAVCV)

Query: 4 ACKQERH 10
AC +ERH
Sbjct: 820 ACMKERH 826


>sp|L_MMVR|RNA-DIRECTED RNA polymerase L|Maize mosaic virus (isolate Maize/United

Query: 4 ACKQERH 10
AC +ERH
Sbjct: 819 ACMKERH 825




17|Sequence|81|90|KQERHDWDYC

>sp|SCAF_EHV1V|CAPSID scaffolding protein|Equine herpesvirus 1 (strain V592)

Query: 1 KQERHDWD 8
++ RHDWD
Sbjct: 448 RKRRHDWD 455


>sp|SCAF_EHV1B|CAPSID scaffolding protein|Equine herpesvirus 1 (strain Ab4p)

Query: 1 KQERHDWD 8
++ RHDWD
Sbjct: 448 RKRRHDWD 455


>sp|GAG_MSVFR|GAG polyprotein|FBR murine osteosarcoma virus (FBR-MSV)

Query: 3 ERHDWDY 9
ER DWDY
Sbjct: 300 ERPDWDY 306


>sp|LTP_PSHV1|LARGE tegument protein deneddylase|Psittacid herpesvirus 1 (isolate Amazon

Query: 3 ERHDWD 8
+RHDWD
Sbjct: 2063 DRHDWD 2068


>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)

Query: 3 ERHDWDY 9
ER DWDY
Sbjct: 313 ERPDWDY 319


>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)

Query: 3 ERHDWDY 9
ER DWDY
Sbjct: 313 ERPDWDY 319


>sp|POL_MLVRD|GAG-POL polyprotein|Radiation murine leukemia virus

Query: 3 ERHDWDY 9
ER DWDY
Sbjct: 314 ERPDWDY 320


>sp|POL_MLVBM|GAG-POL polyprotein|Murine leukemia virus (strain BM5

Query: 3 ERHDWDY 9
ER DWDY
Sbjct: 314 ERPDWDY 320


>sp|POL_MLVAV|GAG-POL polyprotein|AKV murine leukemia virus (AKR

Query: 3 ERHDWDY 9
ER DWDY
Sbjct: 314 ERPDWDY 320


>sp|GGAG_MLVAV|GLYCO-GAG protein|AKV murine leukemia virus (AKR

Query: 3 ERHDWDY 9
ER DWDY
Sbjct: 402 ERPDWDY 408


>sp|POL_MLVMS|GAG-POL polyprotein|Moloney murine leukemia virus (isolate

Query: 3 ERHDWDY 9
ER DWDY
Sbjct: 315 ERPDWDY 321


>sp|GAG_XMRV3|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP35)

Query: 3 ERHDWDY 9
ER DWDY
Sbjct: 313 ERPDWDY 319


>sp|GAG_XMRV6|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP62)

Query: 3 ERHDWDY 9
ER DWDY
Sbjct: 313 ERPDWDY 319


>sp|GAG_MLVBM|GAG polyprotein|Murine leukemia virus (strain BM5

Query: 3 ERHDWDY 9
ER DWDY
Sbjct: 314 ERPDWDY 320


>sp|GAG_MLVDE|GAG polyprotein|Murine leukemia virus (strain DEF27)

Query: 3 ERHDWDY 9
ER DWDY
Sbjct: 313 ERPDWDY 319


>sp|GAG_MLVRD|GAG polyprotein|Radiation murine leukemia virus

Query: 3 ERHDWDY 9
ER DWDY
Sbjct: 314 ERPDWDY 320


>sp|GAG_MLVAV|GAG polyprotein|AKV murine leukemia virus (AKR

Query: 3 ERHDWDY 9
ER DWDY
Sbjct: 314 ERPDWDY 320


>sp|GAG_MLVHO|GAG polyprotein|Hortulanus murine leukemia virus (HoMuLV)

Query: 3 ERHDWDY 9
ER DWDY
Sbjct: 317 ERPDWDY 323


>sp|GAG_MLVMS|GAG polyprotein|Moloney murine leukemia virus (isolate

Query: 3 ERHDWDY 9
ER DWDY
Sbjct: 315 ERPDWDY 321


>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1 KQERHDWDY 9
K + +DWDY
Sbjct: 1872 KTKNNDWDY 1880


>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1 KQERHDWDY 9
K + +DWDY
Sbjct: 1872 KTKNNDWDY 1880


>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1 KQERHDWDY 9
K + +DWDY
Sbjct: 1871 KTKNNDWDY 1879


>sp|AP3A_SARS|ORF3A protein|Severe acute respiratory syndrome coronavirus

Query: 5 HDWDYC 10
H++DYC
Sbjct: 152 HNYDYC 157


>sp|CAPSD_BPS13|CAPSID protein F|Enterobacteria phage S13 (Bacteriophage S13)

Query: 2 QER-----HDWDYC 10
QER HD+D+C
Sbjct: 381 QERVLIRHHDYDHC 394


>sp|LTP_SHV21|LARGE tegument protein deneddylase|Saimiriine herpesvirus 2 (strain 11)

Query: 5 HDWDY 9
HDW Y
Sbjct: 420 HDWSY 424


>sp|P4B_FOWPN|MAJOR core protein 4b|Fowlpox virus (strain NVSL) (FPV)

Query: 5 HDWDY 9
HDW Y
Sbjct: 102 HDWQY 106


>sp|VF050_IIV3|UNCHARACTERIZED protein 094L|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 KQERHDW 7
+QERH+W
Sbjct: 329 EQERHEW 335


>sp|POLG_CSFVB|GENOME polyprotein|Classical swine fever virus (strain

Query: 1 KQERHDWD 8
K +RH+W+
Sbjct: 337 KLQRHEWN 344


>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1

Query: 5 HDWDY 9
HDWDY
Sbjct: 555 HDWDY 559


>sp|CAPSD_FDVS|INNER capsid protein S2|Fiji disease virus (isolate Sugarcane)

Query: 1 KQERHDWDYC 10
K DW++C
Sbjct: 403 KPTDQDWEFC 412


>sp|SCAF_SHV21|CAPSID scaffolding protein|Saimiriine herpesvirus 2 (strain 11)

Query: 1 KQERHDWDYC 10
K++R D+D C
Sbjct: 330 KRKREDFDDC 339


>sp|RDRP_RBDVR|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Raspberry bushy dwarf virus (isolate

Query: 4 RHDWD 8
RHDW+
Sbjct: 434 RHDWE 438


>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)

Query: 3 ERHDWDYC 10
E+HD ++C
Sbjct: 302 EKHDEEFC 309


>sp|RDRP_FDVS|RNA-DIRECTED RNA polymerase VP1|Fiji disease virus (isolate Sugarcane)

Query: 2 QERHDWDY 9
+ERH W +
Sbjct: 1115 KERHTWGF 1122


>sp|GLYC_LASSJ|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain Mouse/Sierra

Query: 3 ERHDWDYC 10
E+HD ++C
Sbjct: 303 EKHDEEFC 310


>sp|1A_CMVQ|REPLICATION protein 1a|Cucumber mosaic virus (strain Q)

Query: 5 HDWD 8
HDWD
Sbjct: 281 HDWD 284


>sp|VIF_CAEVC|VIRION infectivity factor|Caprine arthritis encephalitis virus (strain

Query: 4 RHDWDYC 10
RH WD C
Sbjct: 148 RHRWDLC 154


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 1 KQERHDWDY 9
K + +DWDY
Sbjct: 1894 KCKGNDWDY 1902


>sp|3602L_ASFP4|PROTEIN MGF 360-2L|African swine fever virus (isolate

Query: 5 HDWDYC 10
H W++C
Sbjct: 100 HTWNFC 105


>sp|3602L_ASFB7|PROTEIN MGF 360-2L|African swine fever virus (strain

Query: 5 HDWDYC 10
H W++C
Sbjct: 100 HTWNFC 105


>sp|36012_ASFP4|PROTEIN MGF 360-12L|African swine fever virus (isolate

Query: 5 HDWDYC 10
H WD C
Sbjct: 95 HTWDLC 100


>sp|BP07_BPT4|BASEPLATE wedge protein gp7|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 QERHDWDY 9
+E H W+Y
Sbjct: 696 REEHAWEY 703




18|Sequence|86|95|DWDYCEHRDY

>sp|HBSAG_HBVCP|LARGE envelope protein|Chimpanzee hepatitis B virus (isolate

Query: 1 DWDYCEHRDY 10
DWD+ +DY
Sbjct: 31 DWDFNPKKDY 40


>sp|RPOA_SHFV|REPLICASE polyprotein 1ab|Simian hemorrhagic fever virus (SHFV)

Query: 3 DYCEHRDY 10
D+C HR Y
Sbjct: 2771 DFCAHRHY 2778


>sp|UL34_HCMVT|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 4 YCEHRD 9
YCEH+D
Sbjct: 144 YCEHQD 149


>sp|UL34_HCMVM|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4 YCEHRD 9
YCEH+D
Sbjct: 144 YCEHQD 149


>sp|UL34_HCMVA|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4 YCEHRD 9
YCEH+D
Sbjct: 144 YCEHQD 149


>sp|POLG_HED68|GENOME polyprotein|Human enterovirus D68 (EV68) (EV-68)

Query: 4 YCEHRD 9
YC HRD
Sbjct: 922 YCRHRD 927


>sp|YR363_MIMIV|UNCHARACTERIZED glycosyltransferase R363|Acanthamoeba polyphaga mimivirus (APMV)

Query: 5 CEHRDY 10
CEHRD+
Sbjct: 187 CEHRDF 192


>sp|HBSAG_HBVB3|LARGE envelope protein|Hepatitis B virus genotype B2

Query: 1 DWDYCEHRD 9
DWD H+D
Sbjct: 42 DWDLNPHKD 50


>sp|HBSAG_HBVB7|LARGE envelope protein|Hepatitis B virus genotype B1

Query: 1 DWDYCEHRD 9
DWD H+D
Sbjct: 42 DWDLNPHKD 50


>sp|HBSAG_HBVB5|LARGE envelope protein|Hepatitis B virus genotype B2

Query: 1 DWDYCEHRD 9
DWD H+D
Sbjct: 42 DWDLNPHKD 50


>sp|HBSAG_HBVB8|LARGE envelope protein|Hepatitis B virus genotype B1

Query: 1 DWDYCEHRD 9
DWD H+D
Sbjct: 42 DWDLNPHKD 50


>sp|HBSAG_HBVB1|LARGE envelope protein|Hepatitis B virus genotype B1

Query: 1 DWDYCEHRD 9
DWD H+D
Sbjct: 31 DWDLNPHKD 39


>sp|RDRP_BOOLV|RNA-DIRECTED RNA polymerase|Boolarra virus (BoV)

Query: 2 WDYCEHRDY 10
WD+CE ++
Sbjct: 220 WDWCEAGEF 228


>sp|HBSAG_HBVB6|LARGE envelope protein|Hepatitis B virus genotype B2

Query: 1 DWDYCEHRD 9
DWD H+D
Sbjct: 42 DWDLNPHKD 50


>sp|HBSAG_HBVB2|LARGE envelope protein|Hepatitis B virus genotype B2

Query: 1 DWDYCEHRD 9
DWD H+D
Sbjct: 31 DWDLNPHKD 39


>sp|HEL10_BPT5|PROBABLE helicase D10|Escherichia phage T5 (Enterobacteria phage

Query: 2 WDYCEHR 8
WDYC +
Sbjct: 18 WDYCSKQ 24


>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)

Query: 1 DWDYCEHRDY 10
DW C +DY
Sbjct: 887 DWQNCVWKDY 896


>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus

Query: 2 WDYCEHRDY 10
+D+ EH++Y
Sbjct: 4268 YDFTEHKEY 4276


>sp|RDRP_FHV|RNA-DIRECTED RNA polymerase|Flock house virus (FHV)

Query: 2 WDYCEHRDY 10
WD+CE ++
Sbjct: 220 WDWCEAGEF 228


>sp|RDRP_BBV|RNA-DIRECTED RNA polymerase|Black beetle virus (BBV)

Query: 2 WDYCEHRDY 10
WD+CE ++
Sbjct: 220 WDWCEAGEF 228


>sp|REV_HV2UC|PROTEIN Rev|Human immunodeficiency virus type 2

Query: 3 DYCEHR 8
D CEHR
Sbjct: 120 DSCEHR 125


>sp|VPK_HHV8P|VIRAL protein kinase|Human herpesvirus 8 type P

Query: 1 DWDYCEHRD 9
+W C H+D
Sbjct: 75 EWGQCTHQD 83


>sp|PAP1_CPRVZ|POLY(A) polymerase catalytic subunit|Nile crocodilepox virus (isolate

Query: 3 DYCEHRDY 10
DY H DY
Sbjct: 122 DYAAHEDY 129


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 3 DYCEHR 8
D CEHR
Sbjct: 1076 DSCEHR 1081


>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /

Query: 1 DWDYCEHRDY 10
DW C DY
Sbjct: 878 DWQRCVWEDY 887


>sp|POLR_NORAV|REPLICATION polyprotein|Nora virus

Query: 2 WDYCEHRD 9
++YC +RD
Sbjct: 1965 YNYCTYRD 1972


>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89

Query: 4 YCEHRD 9
YC H+D
Sbjct: 926 YCHHKD 931


>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)

Query: 1 DWDYCEHRDY 10
DW C DY
Sbjct: 875 DWQRCVWEDY 884


>sp|POLG_SVDVH|GENOME polyprotein|Swine vesicular disease virus (strain

Query: 1 DWDYCEHRDY 10
DW C DY
Sbjct: 878 DWQNCVWEDY 887


>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)

Query: 1 DWDYCEHRDY 10
DW C DY
Sbjct: 877 DWQNCVWEDY 886


>sp|POLG_PVMA|GENOME polyprotein|Potato virus A (PVA)

Query: 1 DWDYCE 6
DW YC+
Sbjct: 2515 DWVYCD 2520


>sp|POLG_PEV9U|GENOME polyprotein|Porcine enterovirus 9 (strain UKG/410/73)

Query: 1 DWDYCEHRDY 10
DW+ E DY
Sbjct: 862 DWENVEWEDY 871


>sp|POLG_SVDVU|GENOME polyprotein|Swine vesicular disease virus (strain

Query: 1 DWDYCEHRDY 10
DW C DY
Sbjct: 878 DWQNCVWEDY 887


>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)

Query: 1 DWDYCEHRDY 10
DW C DY
Sbjct: 886 DWQKCVWEDY 895


>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)

Query: 1 DWDYCEHRDY 10
DW C DY
Sbjct: 877 DWQNCVWEDY 886


>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)

Query: 1 DWDYCEHRDY 10
DW C DY
Sbjct: 886 DWQNCVWEDY 895


>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)

Query: 1 DWDYCEHRDY 10
DW C DY
Sbjct: 889 DWQNCVWEDY 898


>sp|DPOL_WMHBV|PROTEIN P|Woolly monkey hepatitis B virus

Query: 1 DWDYCEHRDY 10
DW C+H +
Sbjct: 336 DWGPCQHHGH 345


>sp|REP_CALCV|REPLICATION-ASSOCIATED protein|Cabbage leaf curl virus (isolate

Query: 1 DWDYCEHRDY 10
D DYCE Y
Sbjct: 109 DGDYCESGQY 118


>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)

Query: 1 DWDYCEHRDY 10
DW C DY
Sbjct: 888 DWQNCVWEDY 897


>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)

Query: 1 DWDYCEHRDY 10
DW C DY
Sbjct: 880 DWQNCVWEDY 889


>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)

Query: 1 DWDYCEHRDY 10
DW C DY
Sbjct: 894 DWQNCVWEDY 903


>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /

Query: 1 DWDYCEHRDY 10
DW C DY
Sbjct: 876 DWQNCVWEDY 885


>sp|DPOZ_BPVC8|DNA polymerase DpoZ|Vibrio phage phiVC8

Query: 2 WDYCEHRD 9
W++CE D
Sbjct: 474 WEWCEFTD 481


>sp|VP2_ROTHC|INNER capsid protein VP2|Rotavirus C (isolate RVC/Human/United

Query: 2 WDYCEHRDY 10
WD H DY
Sbjct: 322 WDSKTHADY 330


>sp|PRIM_MUHVS|DNA primase|Murid herpesvirus 1 (strain Smith)

Query: 4 YCEHRDY 10
YCEH Y
Sbjct: 284 YCEHTAY 290


>sp|VP2_ROTPC|INNER capsid protein VP2|Rotavirus C (strain RVC/Pig/United

Query: 2 WDYCEHRDY 10
WD H DY
Sbjct: 320 WDAKTHADY 328


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 DWDYCEHRD 9
++DY +H+D
Sbjct: 5832 EYDYNQHKD 5840


>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 DWDYCEHRD 9
++DY +H+D
Sbjct: 5830 EYDYNQHKD 5838


>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 DWDYCEHRD 9
++DY +H+D
Sbjct: 5830 EYDYNQHKD 5838


>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)

Query: 1 DWDYCEHRDY 10
DW C DY
Sbjct: 884 DWQNCVWEDY 893


>sp|DNBI_SUHV|MAJOR DNA-binding protein|Suid herpesvirus 1 (SuHV-1) (Pseudorabies

Query: 4 YCEHRDY 10
YC+H+ +
Sbjct: 885 YCDHKQF 891


>sp|VG01_BPML5|GENE 1 protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 2 WDYCEHRDY 10
W+ HRDY
Sbjct: 50 WNMPRHRDY 58


>sp|GP_BUNGE|ENVELOPMENT polyprotein|Bunyavirus germiston

Query: 1 DWDYCEH 7
DW C H
Sbjct: 83 DWKQCNH 89


>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)

Query: 1 DWDYCEHRDY 10
DW C DY
Sbjct: 896 DWQNCIWEDY 905




19|Sequence|91|100|EHRDYVMRMK

>sp|CVC2_HHV6U|CAPSID vertex component 2|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 HRDYVMRMK 10
HRD ++RM+
Sbjct: 50 HRDKLLRMR 58


>sp|CVC2_HHV6Z|CAPSID vertex component 2|Human herpesvirus 6B (strain Z29)

Query: 2 HRDYVMRMK 10
HRD ++RM+
Sbjct: 50 HRDKLLRMR 58


>sp|UL25_HHV6G|VIRION-PACKAGING protein UL25 homolog|Human herpesvirus 6A (strain GS)

Query: 2 HRDYVMRMK 10
HRD ++RM+
Sbjct: 50 HRDKLLRMR 58


>sp|V228_FOWPN|PUTATIVE ankyrin repeat protein FPV228|Fowlpox virus (strain NVSL) (FPV)

Query: 2 HRDYVMRM 9
H DYV +M
Sbjct: 96 HNDYVFKM 103




20|Sequence|96|105|VMRMKEFERE

>sp|POL1_GCMV|RNA1 polyprotein|Grapevine chrome mosaic virus (GCMV)

Query: 1 VMRMKEFERE 10
++R+K+ ERE
Sbjct: 136 ILRLKQVERE 145




21|Sequence|101|110|EFERERRLLQ

>sp|RDRP_AHV2H|RNA-DIRECTED RNA polymerase|Atkinsonella hypoxylon virus (isolate 2H)

Query: 3 ERERRLL 9
ERERRLL
Sbjct: 143 ERERRLL 149


>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)

Query: 1 EFERERRLL 9
E +R+RRLL
Sbjct: 1910 ELDRQRRLL 1918


>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human

Query: 1 EFERERRLLQ 10
E+ER+ LLQ
Sbjct: 700 EYERQASLLQ 709




22|Sequence|106|115|RRLLQRKKRR

>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RRLLQRKKR 9
RR++QR+KR
Sbjct: 498 RRVVQREKR 506


>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RRLLQRKKR 9
RR++QR+KR
Sbjct: 511 RRVVQREKR 519


>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RRLLQRKKR 9
RR++QR+KR
Sbjct: 489 RRVVQREKR 497


>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RRLLQRKKR 9
RR++QR+KR
Sbjct: 490 RRVVQREKR 498


>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RRLLQRKKR 9
RR++QR+KR
Sbjct: 503 RRVVQREKR 511


>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RRLLQRKKR 9
RR++QR+KR
Sbjct: 508 RRVVQREKR 516


>sp|ENV_VILV|ENVELOPE glycoprotein gp160|Maedi visna virus (strain 1514)

Query: 1 RRLLQRKKR 9
RR LQRKKR
Sbjct: 648 RRNLQRKKR 656


>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RRLLQRKKR 9
RR++QR+KR
Sbjct: 502 RRVVQREKR 510


>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RRLLQRKKR 9
RR++QR+KR
Sbjct: 503 RRVVQREKR 511


>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RRLLQRKKR 9
RR++QR+KR
Sbjct: 514 RRVVQREKR 522


>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RRLLQRKKR 9
RR++QR+KR
Sbjct: 503 RRVVQREKR 511


>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RRLLQRKKR 9
RR++QR+KR
Sbjct: 502 RRVVQREKR 510


>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RRLLQRKKR 9
RR++QR+KR
Sbjct: 509 RRVVQREKR 517


>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RRLLQRKKR 9
RR++QR+KR
Sbjct: 515 RRVVQREKR 523


>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RRLLQRKKR 9
RR++QR+KR
Sbjct: 501 RRVVQREKR 509


>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RRLLQRKKR 9
RR++QR+KR
Sbjct: 494 RRVVQREKR 502


>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RRLLQRKKR 9
RR++QR+KR
Sbjct: 505 RRVVQREKR 513


>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RRLLQRKKR 9
RR++QR+KR
Sbjct: 495 RRVVQREKR 503


>sp|ENV_VILVK|ENVELOPE glycoprotein gp160|Maedi visna virus (strain KV1772)

Query: 1 RRLLQRKKR 9
RR LQRKKR
Sbjct: 648 RRNLQRKKR 656


>sp|ENV_VILV2|ENVELOPE glycoprotein gp160|Maedi visna virus (strain 1514

Query: 1 RRLLQRKKR 9
RR LQRKKR
Sbjct: 656 RRNLQRKKR 664


>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RRLLQRKKR 9
RR++QR+KR
Sbjct: 503 RRVVQREKR 511


>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RRLLQRKKR 9
RR++QR+KR
Sbjct: 498 RRVVQREKR 506


>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RRLLQRKKR 9
RR++QR+KR
Sbjct: 498 RRVVQREKR 506


>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RRLLQRKKR 9
RR++QR+KR
Sbjct: 493 RRVVQREKR 501


>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RRLLQRKKR 9
RR++QR+KR
Sbjct: 499 RRVVQREKR 507


>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RRLLQRKKR 9
RR++QR+KR
Sbjct: 501 RRVVQREKR 509


>sp|ENV_VILV1|ENVELOPE glycoprotein gp160|Maedi visna virus (strain 1514

Query: 1 RRLLQRKKR 9
RR LQRKKR
Sbjct: 654 RRNLQRKKR 662


>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RRLLQRKKR 9
RR++QR KR
Sbjct: 490 RRVVQRAKR 498


>sp|VL2_HPV09|MINOR capsid protein L2|Human papillomavirus 9

Query: 4 LQRKKRR 10
LQRKKR+
Sbjct: 523 LQRKKRK 529


>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RRLLQRKKR 9
RR++QR+KR
Sbjct: 501 RRVVQREKR 509


>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RRLLQRKKR 9
RR +QR+KR
Sbjct: 500 RRTVQREKR 508




23|Sequence|111|120|RKKRREKKAA

>sp|ENV_SIVCZ|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate CPZ

Query: 1 RKKRREKKAA 10
R+K R+K+AA
Sbjct: 493 RQKDRQKRAA 502


>sp|GB_PSHV1|ENVELOPE glycoprotein B|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 KKRREKKAA 10
+KRREK AA
Sbjct: 859 RKRREKAAA 867


>sp|POL1_CNSV|RNA1 polyprotein|Cycas necrotic stunt virus (CNSV)

Query: 1 RKKRREKKA 9
R KR+EKKA
Sbjct: 276 RVKRQEKKA 284




24|Sequence|116|125|EKKAAELAKG

***** No hits found ******


25|Sequence|121|130|ELAKGQGPGE

>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)

Query: 2 LAKGQGPG 9
L GQGPG
Sbjct: 961 LVHGQGPG 968


>sp|NSP12_RDVF|NON-STRUCTURAL protein 12A|Rice dwarf virus (isolate Fujian)

Query: 1 ELAKGQGP 8
E+AKG+GP
Sbjct: 111 EIAKGRGP 118


>sp|PHOSP_MEASM|PHOSPHOPROTEIN virus (strain Edmonston-Moraten vaccine)

Query: 4 KGQGPGE 10
+GQGPGE
Sbjct: 79 RGQGPGE 85


>sp|PHOSP_MEASF|PHOSPHOPROTEIN virus (strain Edmonston B)

Query: 4 KGQGPGE 10
+GQGPGE
Sbjct: 79 RGQGPGE 85


>sp|PHOSP_MEASE|PHOSPHOPROTEIN virus (strain Edmonston) (MeV)

Query: 4 KGQGPGE 10
+GQGPGE
Sbjct: 79 RGQGPGE 85


>sp|VG10_ICHVA|PUTATIVE membrane protein ORF10|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 LAKGQGPGE 10
L+KG+ PG+
Sbjct: 29 LSKGRAPGD 37


>sp|PHOSP_MEASA|PHOSPHOPROTEIN virus (strain Edmonston-AIK-C vaccine)

Query: 4 KGQGPGE 10
+GQGPGE
Sbjct: 79 RGQGPGE 85


>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)

Query: 2 LAKGQGPG 9
+AK QGPG
Sbjct: 1558 IAKVQGPG 1565


>sp|PORTL_HHV8P|PORTAL protein|Human herpesvirus 8 type P

Query: 1 ELAKGQGPGE 10
E G+GPGE
Sbjct: 560 ENVPGKGPGE 569


>sp|V_MEASE|NON-STRUCTURAL protein V|Measles virus (strain Edmonston) (MeV)

Query: 4 KGQGPGE 10
+GQGPGE
Sbjct: 79 RGQGPGE 85


>sp|V_MEASW|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-Schwarz vaccine)

Query: 4 KGQGPGE 10
+GQGPGE
Sbjct: 79 RGQGPGE 85


>sp|V_MEASA|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 4 KGQGPGE 10
+GQGPGE
Sbjct: 79 RGQGPGE 85


>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)

Query: 3 AKGQGPGE 10
A QGPGE
Sbjct: 175 ANSQGPGE 182


>sp|RIR1_BPT4|RIBONUCLEOSIDE-DIPHOSPHATE reductase subunit alpha|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 ELAKGQGPGE 10
+LAK +GP E
Sbjct: 551 KLAKEKGPSE 560


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 2 LAKGQGPGE 10
L +G+GPG+
Sbjct: 2179 LVRGKGPGK 2187




26|Sequence|126|137|QGPGEVDPKVAL

>sp|PG143_VAR67|VIRION membrane protein OPG143|Variola virus (isolate

Query: 3 PGEVDPKVAL 12
PGE+ PK L
Sbjct: 52 PGEIKPKFCL 61


>sp|PG143_VACCW|VIRION membrane protein OPG143|Vaccinia virus (strain Western Reserve)

Query: 3 PGEVDPKVAL 12
PGE+ PK L
Sbjct: 52 PGEIKPKFCL 61


>sp|PG143_VACCC|VIRION membrane protein OPG143|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 PGEVDPKVAL 12
PGE+ PK L
Sbjct: 52 PGEIKPKFCL 61


>sp|PG143_MONPV|VIRION membrane protein OPG143|Monkeypox virus (MPXV)

Query: 3 PGEVDPKVAL 12
PGE+ PK L
Sbjct: 52 PGEIKPKFCL 61


>sp|A16_VACCT|VIRION membrane protein A16|Vaccinia virus (strain Tian Tan)

Query: 3 PGEVDPKVAL 12
PGE+ PK L
Sbjct: 52 PGEIKPKFCL 61


>sp|A16_VACCA|VIRION membrane protein A16|Vaccinia virus (strain Ankara) (VACV)

Query: 3 PGEVDPKVAL 12
PGE+ PK L
Sbjct: 52 PGEIKPKFCL 61


>sp|A16_RABPU|VIRION membrane protein A16|Rabbitpox virus (strain Utrecht) (RPV)

Query: 3 PGEVDPKVAL 12
PGE+ PK L
Sbjct: 52 PGEIKPKFCL 61


>sp|023R_FRG3G|UNCHARACTERIZED protein 023R|Frog virus 3 (isolate Goorha)

Query: 1 QGPGEVDPKVAL 12
+GP +DP+ L
Sbjct: 72 KGPNSIDPETKL 83


>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1

Query: 2 GPGEVDPKVA 11
GPG +DP++A
Sbjct: 227 GPGSLDPRLA 236


>sp|VR2A_BPT4|PROTEIN rIIA|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 QGPGEVDPK 9
Q PG +DP+
Sbjct: 68 QVPGRLDPR 76


>sp|PORTL_HHV8P|PORTAL protein|Human herpesvirus 8 type P

Query: 1 QGPGEVD 7
+GPGE D
Sbjct: 565 KGPGETD 571


>sp|PORTL_BPG20|PORTAL protein|Thermus phage G20c (Thermus thermophilus

Query: 2 GPGEVDP 8
GPG +DP
Sbjct: 14 GPGSIDP 20


>sp|PORTL_BP234|PORTAL protein|Thermus virus P23-45 (Thermus thermophilus

Query: 2 GPGEVDP 8
GPG +DP
Sbjct: 14 GPGSIDP 20


>sp|VIF_FIVPE|VIRION infectivity factor|Feline immunodeficiency virus (isolate Petaluma)

Query: 4 GEVDPK 9
GE+DPK
Sbjct: 176 GEIDPK 181


>sp|Y1070_SIRV1|UNCHARACTERIZED protein 1070|Sulfolobus islandicus rod-shaped virus 1

Query: 5 EVDPKVA 11
++DPKVA
Sbjct: 640 QIDPKVA 646


>sp|FIB37_BPS16|LONG tail fiber protein Gp37|Salmonella phage S16 (Salmonella phage

Query: 1 QGPGEVD 7
+GPG+VD
Sbjct: 338 KGPGQVD 344


>sp|GD_EHV1D|ENVELOPE glycoprotein D|Equine herpesvirus 1 (strain Kentucky

Query: 3 PGEVDPK 9
PG+ DPK
Sbjct: 353 PGQADPK 359


>sp|GD_EHV1B|ENVELOPE glycoprotein D|Equine herpesvirus 1 (strain Ab4p)

Query: 3 PGEVDPK 9
PG+ DPK
Sbjct: 353 PGQADPK 359


>sp|GD_EHV1A|ENVELOPE glycoprotein D|Equine herpesvirus 1 (strain AB1)

Query: 3 PGEVDPK 9
PG+ DPK
Sbjct: 303 PGQADPK 309


>sp|GD_EHV1K|ENVELOPE glycoprotein D|Equine herpesvirus 1 (strain Kentucky

Query: 3 PGEVDPK 9
PG+ DPK
Sbjct: 353 PGQADPK 359


>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2

Query: 2 GPGEVDPKV 10
G G VDP V
Sbjct: 263 GSGHVDPSV 271


>sp|RPB1_IIV3|PROBABLE DNA-directed RNA polymerase II|Invertebrate iridescent virus 3

Query: 2 GPGEVDPKVA 11
G G V PKV
Sbjct: 602 GDGRVSPKVG 611


>sp|VP3_GFLV|PROTEIN P3|Grapevine fanleaf virus (GFLV)

Query: 1 QGPGEVDPKVA 11
QGP V P+V+
Sbjct: 70 QGPSAVAPQVS 80






THE END