1|Sequence|1|10|MPSLWDRFSS
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 2 PSLWDRFSS 10
P LW+RF++
Sbjct: 21 PCLWERFTN 29
>sp|PAX_I09A0|PROTEIN PA-X|Influenza A virus (strain swl
Query: 3 SLWDRFSS 10
SLWD F S
Sbjct: 186 SLWDSFVS 193
>sp|MATRX_VSIVS|MATRIX protein|Vesicular stomatitis Indiana virus (strain
Query: 2 PSLWDRFSS 10
P +WD F+S
Sbjct: 187 PMIWDHFNS 195
>sp|MATRX_VSIVN|MATRIX protein|Vesicular stomatitis Indiana virus (strain
Query: 2 PSLWDRFSS 10
P +WD F+S
Sbjct: 187 PMIWDHFNS 195
>sp|MATRX_VSIVC|MATRIX protein|Vesicular stomatitis Indiana virus (strain
Query: 2 PSLWDRFSS 10
P +WD F+S
Sbjct: 187 PMIWDHFNS 195
>sp|MATRX_VSIVA|MATRIX protein|Vesicular stomatitis Indiana virus (strain
Query: 2 PSLWDRFSS 10
P +WD F+S
Sbjct: 187 PMIWDHFNS 195
>sp|MATRX_VSIVG|MATRIX protein|Vesicular stomatitis Indiana virus (strain
Query: 2 PSLWDRFSS 10
P +WD F+S
Sbjct: 187 PMIWDHFNS 195
>sp|NCAP_UUKS|NUCLEOPROTEIN virus (strain S23) (UUKV)
Query: 1 MPSLWDRFS 9
MP W RF+
Sbjct: 3 MPENWVRFA 11
>sp|PAX_I30A0|PROTEIN PA-X|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 4 LWDRFSS 10
LWD F+S
Sbjct: 187 LWDSFAS 193
>sp|IE2_HHV6U|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 LWDRFSS 10
LWD+F +
Sbjct: 1368 LWDKFEN 1374
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 1 MPSLWDR 7
MP+ WD+
Sbjct: 360 MPAEWDK 366
>sp|IE2_HHV6G|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain GS)
Query: 4 LWDRFSS 10
LWD+F +
Sbjct: 1382 LWDKFEN 1388
>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl
Query: 3 SLWDRF 8
SLWD F
Sbjct: 186 SLWDSF 191
>sp|PAX_I03A2|PROTEIN PA-X|Influenza A virus (strain A/wyoming/03/2003
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 2 PSLWDRFS 9
P+LW R +
Sbjct: 1103 PTLWSRVT 1110
>sp|HEMA_CVHN2|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N2)
Query: 3 SLWDRFS 9
S+W RFS
Sbjct: 334 SIWPRFS 340
>sp|PAX_I93A0|PROTEIN PA-X|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I83A8|PROTEIN PA-X|Influenza A virus (strain A/Hong
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I80A4|PROTEIN PA-X|Influenza A virus (strain A/Memphis/4/1980
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I77A4|PROTEIN PA-X|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I72A4|PROTEIN PA-X|Influenza A virus (strain A/Memphis/101/1972
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I72A3|PROTEIN PA-X|Influenza A virus (strain A/Memphis/102/1972
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 2 PSLWDRFS 9
P+LW R +
Sbjct: 1102 PTLWSRVT 1109
>sp|PAX_I68A6|PROTEIN PA-X|Influenza A virus (strain A/Northern
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I68A4|PROTEIN PA-X|Influenza A virus (strain A/Hong
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I67A0|PROTEIN PA-X|Influenza A virus (strain A/Tokyo/3/1967
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I07A0|PROTEIN PA-X|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I73A5|PROTEIN PA-X|Influenza A virus (strain A/Port
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I71A1|PROTEIN PA-X|Influenza A virus (strain A/Memphis/1/1971
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I70A0|PROTEIN PA-X|Influenza A virus (strain A/Qu/7/1970
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I69A0|PROTEIN PA-X|Influenza A virus (strain A/England/878/1969
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I34A1|PROTEIN PA-X|Influenza A virus (strain A/Puerto
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I06A0|PROTEIN PA-X|Influenza A virus (strain A/Russia:St.Petersburg/8/2006
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I78A8|PROTEIN PA-X|Influenza A virus (strain A/Memphis/18/1978
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I78A7|PROTEIN PA-X|Influenza A virus (strain A/Memphis/2/1978
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I76A6|PROTEIN PA-X|Influenza A virus (strain A/Memphis/110/1976
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I75A0|PROTEIN PA-X|Influenza A virus (strain A/Beijing/39/1975
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I00A1|PROTEIN PA-X|Influenza A virus (strain A/New
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|HEMA_CVHN5|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N5)
Query: 3 SLWDRFS 9
S+W RFS
Sbjct: 334 SIWPRFS 340
>sp|PAX_I96A3|PROTEIN PA-X|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I68A5|PROTEIN PA-X|Influenza A virus (strain A/Korea/426/1968
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I73A4|PROTEIN PA-X|Influenza A virus (strain A/Equine/London/1416/1973
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I72A2|PROTEIN PA-X|Influenza A virus (strain A/Udorn/307/1972
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I54A2|PROTEIN PA-X|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I51A0|PROTEIN PA-X|Influenza A virus (strain A/USA:Albany/12/1951
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I36A0|PROTEIN PA-X|Influenza A virus (strain A/Henry/1936
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I35A3|PROTEIN PA-X|Influenza A virus (strain A/USA:Phila/1935
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I33A0|PROTEIN PA-X|Influenza A virus (strain A/Wilson-Smith/1933
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I02A1|PROTEIN PA-X|Influenza A virus (strain A/Guinea
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I000X|PROTEIN PA-X|Influenza A virus (strain A/X-31
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I18A0|PROTEIN PA-X|Influenza A virus (strain A/Brevig
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I83A1|PROTEIN PA-X|Influenza A virus (strain A/Chile/1/1983
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I80AA|PROTEIN PA-X|Influenza A virus (strain A/India/6263/1980
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I57A1|PROTEIN PA-X|Influenza A virus (strain A/Leningrad/134/1957
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 MPSLWD 6
+PS+WD
Sbjct: 62 IPSMWD 67
>sp|PAX_I96A2|PROTEIN PA-X|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I96A0|PROTEIN PA-X|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I77AD|PROTEIN PA-X|Influenza A virus (strain A/Swine/Tennessee/26/1977
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I57A5|PROTEIN PA-X|Influenza A virus (strain A/Singapore/1/1957
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I57A3|PROTEIN PA-X|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I57A2|PROTEIN PA-X|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 MPSLWD 6
+PS+WD
Sbjct: 62 IPSMWD 67
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 MPSLWD 6
+PS+WD
Sbjct: 62 IPSMWD 67
>sp|PAX_I82A4|PROTEIN PA-X|Influenza A virus (strain A/Swine/Hong
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I78A9|PROTEIN PA-X|Influenza A virus (strain A/Swine/Hong
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I77AB|PROTEIN PA-X|Influenza A virus (strain A/USSR/90/1977
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I77AA|PROTEIN PA-X|Influenza A virus (strain A/Brazil/11/1978
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I61A1|PROTEIN PA-X|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 MPSLWD 6
+PS+WD
Sbjct: 62 IPSMWD 67
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 MPSLWD 6
+PS+WD
Sbjct: 62 IPSMWD 67
>sp|PAX_I97A1|PROTEIN PA-X|Influenza A virus (strain A/Hong
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I57A0|PROTEIN PA-X|Influenza A virus (strain A/Japan/305/1957
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I78A3|PROTEIN PA-X|Influenza A virus (strain A/Mallard/New
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I45A0|PROTEIN PA-X|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I02A4|PROTEIN PA-X|Influenza A virus (strain A/Silky
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I02A2|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I40A0|PROTEIN PA-X|Influenza A virus (strain A/Hickox/1940
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I97A0|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I85A3|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I67A2|PROTEIN PA-X|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I59A0|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I43A0|PROTEIN PA-X|Influenza A virus (strain A/USA:Iowa/1943
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|PAX_I02A0|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFVS 193
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 MPSLW 5
+PSLW
Sbjct: 450 IPSLW 454
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 MPSLW 5
+PSLW
Sbjct: 452 IPSLW 456
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 MPSLW 5
+PSLW
Sbjct: 453 IPSLW 457
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 MPSLW 5
+PSLW
Sbjct: 452 IPSLW 456
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 MPSLW 5
+PSLW
Sbjct: 452 IPSLW 456
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 MPSLW 5
+PSLW
Sbjct: 452 IPSLW 456
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 MPSLW 5
+PSLW
Sbjct: 451 IPSLW 455
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 MPSLW 5
+PSLW
Sbjct: 451 IPSLW 455
>sp|PAX_I60A0|PROTEIN PA-X|Influenza A virus (strain A/Ann
Query: 4 LWDRFSS 10
LWD F S
Sbjct: 187 LWDSFIS 193
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 WDRFSS 10
WDRF +
Sbjct: 359 WDRFGT 364
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 WDRFSS 10
WDRF +
Sbjct: 359 WDRFGT 364
>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human
Query: 4 LWDRF 8
+WDRF
Sbjct: 536 VWDRF 540
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 MPSLW 5
+PSLW
Sbjct: 452 VPSLW 456
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 MPSLW 5
+PSLW
Sbjct: 452 VPSLW 456
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 2 PSLWDRF 8
PS+W R
Sbjct: 1011 PSIWSRI 1017
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 5 WDRFSS 10
W+RFS+
Sbjct: 937 WERFSN 942
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 5 WDRFSS 10
W+RFS+
Sbjct: 939 WERFSN 944
2|Sequence|6|15|DRFSSSSTSS
***** No hits found ******
3|Sequence|11|20|SSTSSSPSSL
***** No hits found ******
4|Sequence|16|25|SPSSLPRTPT
>sp|LRP2_HHV1F|LATENCY-RELATED protein 2|Human herpesvirus 1 (strain F)
Query: 5 LPRTPT 10
LPRTPT
Sbjct: 21 LPRTPT 26
>sp|TAT_HV1MA|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 PSSLPRTP 9
P S PRTP
Sbjct: 14 PGSQPRTP 21
>sp|LRP1_HHV1F|LATENCY-RELATED protein 1|Human herpesvirus 1 (strain F)
Query: 5 LPRTPT 10
LPRTPT
Sbjct: 39 LPRTPT 44
>sp|TAT_HV1EL|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 PSSLPRTP 9
P S PRTP
Sbjct: 14 PGSQPRTP 21
>sp|VP2_LORDV|MINOR capsid protein VP2|Lordsdale virus (strain GII/Human/United
Query: 1 SPSSLPRTPT 10
SPS+L PT
Sbjct: 155 SPSALSNAPT 164
5|Sequence|21|30|PRTPTPDRPP
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 PRTPTPDRP 9
P T PDRP
Sbjct: 714 PATRGPDRP 722
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 2 RTPTPDRPP 10
RTP PDR P
Sbjct: 1456 RTPVPDRWP 1464
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 2 RTPTPDRPP 10
RTP PDR P
Sbjct: 1456 RTPVPDRWP 1464
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 2 RTPTPDRPP 10
RTP PDR P
Sbjct: 1456 RTPVPDRWP 1464
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 2 RTPTPDRPP 10
RTP PDR P
Sbjct: 1456 RTPVPDRWP 1464
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 2 RTPTPDRPP 10
RTP PDR P
Sbjct: 1456 RTPVPDRWP 1464
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 2 RTPTPDRPP 10
RTP PDR P
Sbjct: 1456 RTPVPDRWP 1464
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 2 RTPTPDRPP 10
RTP PDR P
Sbjct: 1456 RTPVPDRWP 1464
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 RTPTPDRPP 10
RTP PDR P
Sbjct: 1456 RTPVPDRWP 1464
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 2 RTPTPDRPP 10
RTP PDR P
Sbjct: 1456 RTPVPDRWP 1464
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 PTPDRPP 10
PTP PP
Sbjct: 724 PTPRGPP 730
>sp|CAPSD_HBVB6|CAPSID protein|Hepatitis B virus genotype B2
Query: 2 RTPTPDRPP 10
RTPT RPP
Sbjct: 127 RTPTAYRPP 135
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 PRTPTPDRP 9
P + PDRP
Sbjct: 719 PASRGPDRP 727
>sp|PG097_MONPV|PROTEIN OPG097|Monkeypox virus (MPXV)
Query: 4 PTPDRPP 10
P P++PP
Sbjct: 42 PQPNQPP 48
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 2 RTPTPDRPP 10
R P PD P
Sbjct: 124 RDPNPDYDP 132
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 RTPTPDRPP 10
R P PD P
Sbjct: 447 RDPNPDYDP 455
>sp|HBEAG_HBVC1|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 RTPTPDRPP 10
RTP RPP
Sbjct: 156 RTPQAYRPP 164
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 PRTPTPDRP 9
P PDRP
Sbjct: 712 PSPREPDRP 720
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 2 RTPTPDRP 9
R PT +RP
Sbjct: 439 RIPTSNRP 446
>sp|LRP2_HHV1F|LATENCY-RELATED protein 2|Human herpesvirus 1 (strain F)
Query: 1 PRTPTPDRP 9
PRTPTP P
Sbjct: 22 PRTPTPAHP 30
>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32
Query: 2 RTPTPDRPP 10
+ PTP PP
Sbjct: 250 KDPTPTTPP 258
>sp|LRP1_HHV1F|LATENCY-RELATED protein 1|Human herpesvirus 1 (strain F)
Query: 1 PRTPTPDRP 9
PRTPTP P
Sbjct: 40 PRTPTPSHP 48
>sp|GG_HHV2B|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain B4327UR)
Query: 2 RTPTPDRPP 10
RTP P++PP
Sbjct: 583 RTPNPNKPP 591
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 PRTPTPDRP 9
P PDRP
Sbjct: 734 PNPRGPDRP 742
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 PRTPTPDRP 9
P PDRP
Sbjct: 717 PNPRGPDRP 725
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 PRTPTPDRP 9
P PDRP
Sbjct: 720 PNRGGPDRP 728
>sp|GG_HHV2H|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain HG52)
Query: 2 RTPTPDRPP 10
RTP P++PP
Sbjct: 585 RTPNPNKPP 593
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 PRTPTPD 7
P TP PD
Sbjct: 1457 PETPAPD 1463
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 PRTPTPDRP 9
P PDRP
Sbjct: 701 PTARGPDRP 709
>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 PRTPTPDRPP 10
P PT +PP
Sbjct: 68 PYQPTTFKPP 77
>sp|VP4_ROTH5|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 PRTPTPDRPP 10
P PT +PP
Sbjct: 68 PYQPTTFKPP 77
>sp|HBEAG_HBVD7|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 2 RTPTPDRPP 10
RTP RPP
Sbjct: 156 RTPQAYRPP 164
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 PRTPTPDRP 9
P PDRP
Sbjct: 711 PNPRGPDRP 719
>sp|VP4_ROTHL|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 PRTPTPDRPP 10
P PT +PP
Sbjct: 68 PYQPTTFKPP 77
>sp|HBEAG_HBVF6|EXTERNAL core antigen|Hepatitis B virus genotype F2
Query: 2 RTPTPDRPP 10
RTP RPP
Sbjct: 156 RTPPAYRPP 164
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 5 TPDRPP 10
TPD+PP
Sbjct: 750 TPDQPP 755
>sp|BNL2B_EBVG|UNCHARACTERIZED protein BNLF2b|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 RTPTPDRPP 10
R P DRPP
Sbjct: 33 RVPVEDRPP 41
>sp|BNL2B_EBVB9|UNCHARACTERIZED protein BNLF2b|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 RTPTPDRPP 10
R P DRPP
Sbjct: 33 RVPVEDRPP 41
>sp|BNL2B_EBVA8|UNCHARACTERIZED protein BNLF2b|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 RTPTPDRPP 10
R P DRPP
Sbjct: 33 RVPVEDRPP 41
>sp|GM_HHV8P|ENVELOPE glycoprotein M|Human herpesvirus 8 type P
Query: 4 PTPDRPP 10
PT DR P
Sbjct: 345 PTVDRTP 351
>sp|VIF_HV19N|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 TPTPDRPP 10
TPT RPP
Sbjct: 155 TPTRKRPP 162
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 2 RTPTPDRPP 10
+TP DRPP
Sbjct: 296 QTPGADRPP 304
>sp|CAPSD_HBVC1|CAPSID protein|Hepatitis B virus genotype C
Query: 2 RTPTPDRPP 10
RTP RPP
Sbjct: 127 RTPQAYRPP 135
>sp|VE2_HPV30|REGULATORY protein E2|Human papillomavirus 30
Query: 1 PRTPTPD 7
PRT PD
Sbjct: 246 PRTTEPD 252
>sp|VP4_ROTHM|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 PRTPTPDRPP 10
P PT +PP
Sbjct: 68 PYQPTSFKPP 77
>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 PRTPTPDRPP 10
P PT +PP
Sbjct: 68 PYQPTSFKPP 77
>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b
Query: 4 PTPDRP 9
PTPD P
Sbjct: 433 PTPDNP 438
>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PRTPTPDRPP 10
PR PTP PP
Sbjct: 698 PRAPTPMSPP 707
>sp|HBEAG_HBVC3|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 RTPTPDRPP 10
RTP RPP
Sbjct: 156 RTPPAYRPP 164
>sp|HBEAG_HBVC0|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 RTPTPDRPP 10
RTP RPP
Sbjct: 156 RTPPAYRPP 164
>sp|HBEAG_HBVB4|EXTERNAL core antigen|Hepatitis B virus genotype B/C
Query: 2 RTPTPDRPP 10
RTP RPP
Sbjct: 156 RTPPAYRPP 164
>sp|HBEAG_HBVB2|EXTERNAL core antigen|Hepatitis B virus genotype B2
Query: 2 RTPTPDRPP 10
RTP RPP
Sbjct: 156 RTPPAYRPP 164
>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 PRTPTPDRPP 10
P PT +PP
Sbjct: 68 PYQPTSFKPP 77
>sp|EBNA4_EBVB9|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PRTPTPDRPP 10
PR PTP PP
Sbjct: 698 PRAPTPMSPP 707
>sp|VIF_HV1U4|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 TPTPDRPP 10
TPT +PP
Sbjct: 155 TPTRAKPP 162
>sp|RIR2_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain HG52)
Query: 1 PRTPTPDR 8
P PTP+R
Sbjct: 26 PVCPTPER 33
>sp|RIR2_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain 333)
Query: 1 PRTPTPDR 8
P PTP+R
Sbjct: 26 PVCPTPER 33
>sp|HBEAG_HBVF1|EXTERNAL core antigen|Hepatitis B virus genotype F2
Query: 2 RTPTPDRPP 10
RTP RPP
Sbjct: 156 RTPPAYRPP 164
>sp|NCAP_VSIVN|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 2 RTPTPD 7
R PTPD
Sbjct: 387 RKPTPD 392
>sp|NCAP_VSIVC|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 2 RTPTPD 7
R PTPD
Sbjct: 387 RKPTPD 392
>sp|NCAP_VSIVA|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 2 RTPTPD 7
R PTPD
Sbjct: 387 RKPTPD 392
>sp|NCAP_VSIVS|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 2 RTPTPD 7
R PTPD
Sbjct: 387 RKPTPD 392
>sp|HBEAG_HBVH3|EXTERNAL core antigen|Hepatitis B virus genotype H
Query: 2 RTPTPDRPP 10
RTP RPP
Sbjct: 156 RTPPAYRPP 164
>sp|HBEAG_HBVC7|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 RTPTPDRPP 10
RTP RPP
Sbjct: 156 RTPPAYRPP 164
>sp|HBEAG_HBVC2|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 RTPTPDRPP 10
RTP RPP
Sbjct: 156 RTPPAYRPP 164
>sp|NCAP_VSIVG|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 2 RTPTPD 7
R PTPD
Sbjct: 387 RKPTPD 392
>sp|HBEAG_HBVD3|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 2 RTPTPDRPP 10
RTP RPP
Sbjct: 156 RTPPAYRPP 164
>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 PRTPTPDRPP 10
P PT +PP
Sbjct: 68 PYQPTSFKPP 77
>sp|HBEAG_HBVB1|EXTERNAL core antigen|Hepatitis B virus genotype B1
Query: 2 RTPTPDRPP 10
RTP RPP
Sbjct: 156 RTPPAYRPP 164
>sp|HBEAG_HBVD6|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 2 RTPTPDRPP 10
RTP RPP
Sbjct: 156 RTPPAYRPP 164
>sp|HBEAG_HBVA3|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 2 RTPTPDRPP 10
RTP RPP
Sbjct: 156 RTPPAYRPP 164
>sp|HBEAG_HBVA7|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 2 RTPTPDRPP 10
RTP RPP
Sbjct: 156 RTPPAYRPP 164
>sp|HBEAG_HBVA2|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 2 RTPTPDRPP 10
RTP RPP
Sbjct: 156 RTPPAYRPP 164
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 1 PRTPTPDRPP 10
P TP P +PP
Sbjct: 53 PNTPDPQKPP 62
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 1 PRTPTPDRPP 10
P TP P +PP
Sbjct: 53 PNTPDPQKPP 62
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 1 PRTPTPDRPP 10
P TP P +PP
Sbjct: 53 PNTPDPQKPP 62
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 PRTPTPDR 8
P TP P +
Sbjct: 475 PHTPIPSK 482
>sp|CAPSD_HBVC9|CAPSID protein|Hepatitis B virus genotype C
Query: 2 RTPTPDRPP 10
RTP RPP
Sbjct: 127 RTPIAYRPP 135
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 1 PRTPTP 6
P+TP P
Sbjct: 685 PKTPPP 690
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 PRTPTPDRPP 10
PR P DRPP
Sbjct: 286 PRPPHQDRPP 295
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 1 PRTPTP 6
P+TP P
Sbjct: 689 PKTPPP 694
>sp|MATRX_LBV|MATRIX protein|Lagos bat virus (LBV)
Query: 1 PRTPTPDRPP 10
P+ TP PP
Sbjct: 17 PKPGTPSAPP 26
>sp|HBEAG_HBVCJ|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 RTPTPDRPP 10
RTP RPP
Sbjct: 156 RTPPAYRPP 164
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 PRTPTPDR 8
P TP P R
Sbjct: 1443 PETPPPPR 1450
>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5
Query: 1 PRTPTP 6
PRTP+P
Sbjct: 66 PRTPSP 71
>sp|NCAP_INBAC|NUCLEOPROTEIN B virus (strain B/Ann
Query: 2 RTPTPDR 8
R P+P+R
Sbjct: 47 RNPSPER 53
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 PTPDRPP 10
P P PP
Sbjct: 1950 PVPPNPP 1956
Query: 1 PRTPTPDR 8
P TP P +
Sbjct: 485 PNTPIPSK 492
>sp|NCAP_INBAA|NUCLEOPROTEIN B virus (strain B/Ann
Query: 2 RTPTPDR 8
R P+P+R
Sbjct: 47 RNPSPER 53
>sp|GM_EBVA8|ENVELOPE glycoprotein M|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 RTPTP 6
RTP+P
Sbjct: 356 RTPSP 360
>sp|GM_EBVG|ENVELOPE glycoprotein M|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 RTPTP 6
RTP+P
Sbjct: 356 RTPSP 360
>sp|GM_EBVB9|ENVELOPE glycoprotein M|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 RTPTP 6
RTP+P
Sbjct: 356 RTPSP 360
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 TPDRP 9
TPDRP
Sbjct: 459 TPDRP 463
>sp|NCAP_INBSI|NUCLEOPROTEIN B virus (strain B/Singapore/222/1979)
Query: 2 RTPTPDR 8
R P+P+R
Sbjct: 47 RNPSPER 53
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 3 TPTPDRPP 10
TP PDR P
Sbjct: 54 TPNPDRRP 61
6|Sequence|26|35|PDRPPRSAWG
>sp|BEL1_SFV3L|PROTEIN Bel-1|Simian foamy virus type 3
Query: 2 DRPPRSAWG 10
DRP RS WG
Sbjct: 215 DRPKRSRWG 223
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PDRPPRSAWG 10
P R P +WG
Sbjct: 656 PRRTPSPSWG 665
>sp|EV45_HHV2H|ENVELOPE protein UL45|Human herpesvirus 2 (strain HG52)
Query: 4 PPRSAWG 10
PPRS+WG
Sbjct: 49 PPRSSWG 55
>sp|EV45_HHV23|ENVELOPE protein UL45|Human herpesvirus 2 (strain 333)
Query: 4 PPRSAWG 10
PPRS+WG
Sbjct: 49 PPRSSWG 55
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 RPPRSAW 9
RPPR AW
Sbjct: 545 RPPRGAW 551
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 3 RPPRSAW 9
RPPR AW
Sbjct: 545 RPPRGAW 551
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 RPPRSAW 9
RPPR AW
Sbjct: 545 RPPRGAW 551
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 3 RPPRSAW 9
RPPR AW
Sbjct: 545 RPPRGAW 551
>sp|GK_HHV1R|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R15)
Query: 1 PDRPPRSAW 9
P PP W
Sbjct: 67 PTHPPNGGW 75
>sp|GK_HHV1M|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain MP)
Query: 1 PDRPPRSAW 9
P PP W
Sbjct: 67 PTHPPNGGW 75
>sp|GK_HHV11|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain 17)
Query: 1 PDRPPRSAW 9
P PP W
Sbjct: 67 PTHPPNGGW 75
>sp|GK_HHV19|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R19)
Query: 1 PDRPPRSAW 9
P PP W
Sbjct: 67 PTHPPNGGW 75
>sp|GK_HHV1K|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain KOS)
Query: 1 PDRPPRSAW 9
P PP W
Sbjct: 67 PTHPPNGGW 75
>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 DRPPRSAW 9
+R PR AW
Sbjct: 324 NRRPRQAW 331
>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)
Query: 1 PDRPPRSAW 9
P PP AW
Sbjct: 67 PTAPPGGAW 75
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 DRPPRSAW 9
+R PR AW
Sbjct: 324 NRRPRQAW 331
>sp|M2_I61A1|MATRIX protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 DRPPRSAWG 10
+ P RS WG
Sbjct: 8 ETPTRSEWG 16
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 3 RPPRSAW 9
RPP+ AW
Sbjct: 545 RPPKGAW 551
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 RPPRSAW 9
RPPR +W
Sbjct: 543 RPPRGSW 549
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 4 PPRSAWG 10
PP+SAW
Sbjct: 1078 PPKSAWA 1084
Query: 2 DRPPRS 7
DRPPR+
Sbjct: 77 DRPPRT 82
>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959
Query: 5 PRSAW 9
PRS+W
Sbjct: 134 PRSSW 138
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 3 RPPRSAW 9
RPPR +W
Sbjct: 545 RPPRGSW 551
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 PDRPPR 6
PDRP R
Sbjct: 727 PDRPER 732
>sp|VE2_HPV27|REGULATORY protein E2|Human papillomavirus 27
Query: 2 DRPPRSAW 9
D PP+ W
Sbjct: 103 DAPPKKCW 110
>sp|NCAP_PI2HT|NUCLEOPROTEIN parainfluenza 2 virus (strain
Query: 1 PDRPPRS 7
PD+PP S
Sbjct: 185 PDQPPVS 191
>sp|M2_I85A4|MATRIX protein 2|Influenza A virus (strain A/Swine/Netherlands/12/1985
Query: 2 DRPPRSAWG 10
+ P R+ WG
Sbjct: 8 ETPTRNGWG 16
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 PDRPPRSAW 9
P RP R+A+
Sbjct: 1747 PPRPKRAAY 1755
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 PDRPPRSAWG 10
P+RPP W
Sbjct: 322 PNRPPDDVWA 331
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 2 DRPPRSA 8
DRPPR+
Sbjct: 76 DRPPRTV 82
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 RPPRSAW 9
RPP AW
Sbjct: 544 RPPHGAW 550
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PDRPPR 6
PD+PPR
Sbjct: 747 PDKPPR 752
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 DRPPRSAW 9
++ PR AW
Sbjct: 322 NKKPRQAW 329
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 5 PRSAWG 10
PR WG
Sbjct: 3566 PRIVWG 3571
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 DRPPRSAW 9
++ PR AW
Sbjct: 321 NKKPRQAW 328
>sp|M2_I18A0|MATRIX protein 2|Influenza A virus (strain A/Brevig
Query: 2 DRPPRSAWG 10
+ P R+ WG
Sbjct: 8 ETPTRNEWG 16
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PDRPPR 6
PD+PPR
Sbjct: 746 PDKPPR 751
>sp|ICP0_HHV2H|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 2 (strain HG52)
Query: 1 PDRPPRSAWG 10
P+RPPR G
Sbjct: 15 PERPPRQTPG 24
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 DRPPRSAW 9
++ PR AW
Sbjct: 332 NKRPRQAW 339
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PDRPPR 6
PDRP R
Sbjct: 460 PDRPSR 465
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 PDRPPRSA 8
PD PP A
Sbjct: 1443 PDTPPPPA 1450
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 DRPPRSAW 9
++ PR AW
Sbjct: 330 NKRPRQAW 337
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 1 PDRPP 5
PD+PP
Sbjct: 751 PDQPP 755
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PDRPPRS 7
P RPP +
Sbjct: 577 PQRPPEA 583
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 DRPPRSAW 9
++ PR AW
Sbjct: 330 NKRPRQAW 337
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 RPPRSAW 9
RPP AW
Sbjct: 543 RPPLGAW 549
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 3 RPPRSAW 9
RPP AW
Sbjct: 544 RPPAGAW 550
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 PDRPPRSAW 9
PD P +AW
Sbjct: 2304 PDLRPATAW 2312
>sp|NCAP_BCCV|NUCLEOPROTEIN Creek Canal orthohantavirus (BCCV)
Query: 5 PRSAW 9
P+SAW
Sbjct: 301 PQSAW 305
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 RPPRSAW 9
RPP+ +W
Sbjct: 545 RPPQGSW 551
>sp|UL06_HCMVM|UNCHARACTERIZED protein UL6|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 PRSAW 9
P+SAW
Sbjct: 260 PQSAW 264
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 RPPRSAW 9
RPP+ +W
Sbjct: 545 RPPQGSW 551
>sp|US10_VZVD|VIRION protein US10 homolog|Varicella-zoster virus (strain Dumas)
Query: 2 DRPPRSAWG 10
+RP S WG
Sbjct: 60 ERPCASLWG 68
>sp|VE2_HPV2A|REGULATORY protein E2|Human papillomavirus type 2a
Query: 2 DRPPRSAW 9
D PP+ W
Sbjct: 103 DAPPKKCW 110
7|Sequence|31|40|RSAWGSATRE
>sp|U17_HHV6Z|PROTEIN U17|Human herpesvirus 6B (strain Z29)
Query: 2 SAWGSATRE 10
SAWG TR+
Sbjct: 94 SAWGKETRD 102
>sp|U16_HHV6U|PROTEIN U17/U16|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 SAWGSATRE 10
S WG TR+
Sbjct: 94 SVWGEETRD 102
>sp|U16_HHV6G|PROTEIN U17/U16|Human herpesvirus 6A (strain GS)
Query: 2 SAWGSATRE 10
S WG TR+
Sbjct: 94 SVWGEETRD 102
>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)
Query: 1 RSAWGS 6
RSAWG+
Sbjct: 21 RSAWGN 26
>sp|ST_POVJC|SMALL t antigen|JC polyomavirus (JCPyV) (JCV)
Query: 1 RSAWGS 6
RSAWG+
Sbjct: 21 RSAWGN 26
>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1
Query: 4 WGSATR 9
WG ATR
Sbjct: 41 WGPATR 46
>sp|NS1_I76A6|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/110/1976
Query: 1 RSAWGSATRE 10
R AWGS+ +
Sbjct: 200 RFAWGSSNED 209
>sp|NS1_I72A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/101/1972
Query: 1 RSAWGSA 7
R AWGS+
Sbjct: 200 RFAWGSS 206
>sp|NS1_I72A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/102/1972
Query: 1 RSAWGSA 7
R AWGS+
Sbjct: 200 RFAWGSS 206
>sp|NS1_I89A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Beijing/352/1989
Query: 1 RSAWGSA 7
R AWGS+
Sbjct: 200 RFAWGSS 206
>sp|NS1_I73A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Port
Query: 1 RSAWGSA 7
R AWGS+
Sbjct: 200 RFAWGSS 206
>sp|NS1_I72A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Udorn/307/1972
Query: 1 RSAWGSA 7
R AWGS+
Sbjct: 200 RFAWGSS 206
>sp|NS1_I77A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 RSAWGSA 7
R AWGS+
Sbjct: 200 RFAWGSS 206
8|Sequence|36|45|SATREEGFDR
>sp|VE7_HPV33|PROTEIN E7|Human papillomavirus 33
Query: 1 SATREEGFDR 10
S+ +EG DR
Sbjct: 31 SSDEDEGLDR 40
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 3 TREEGFD 9
T E GFD
Sbjct: 2091 TTENGFD 2097
9|Sequence|41|50|EGFDRSTSLE
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 3 FDRSTSL 9
FDR TS+
Sbjct: 715 FDRDTSM 721
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 3 FDRSTSL 9
FDR TS+
Sbjct: 720 FDRDTSM 726
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 3 FDRSTSL 9
FDR TS+
Sbjct: 722 FDRDTSM 728
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 4 DRSTSLE 10
DRSTS++
Sbjct: 1577 DRSTSVQ 1583
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 4 DRSTSLE 10
DRSTS++
Sbjct: 1577 DRSTSVQ 1583
10|Sequence|46|55|STSLESSDCE
***** No hits found ******
11|Sequence|51|60|SSDCESLDSS
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SSDCESLDSS 10
S CE+LD S
Sbjct: 852 SEPCEALDLS 861
>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 SSDCESLDSS 10
S CE+LD S
Sbjct: 843 SEPCEALDLS 852
>sp|NEC1_HHV6Z|NUCLEAR egress protein 1|Human herpesvirus 6B (strain Z29)
Query: 4 CESLDSS 10
CE+LD++
Sbjct: 220 CETLDTN 226
>sp|NEC1_HHV6U|NUCLEAR egress protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 CESLDSS 10
CE+LD++
Sbjct: 220 CETLDTN 226
>sp|NEC1_HHV6H|NUCLEAR egress protein 1|Human herpesvirus 6B (HHV-6 variant
Query: 4 CESLDSS 10
CE+LD++
Sbjct: 220 CETLDTN 226
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 SDCESLDS 9
S C++LDS
Sbjct: 456 SACKTLDS 463
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 4 CESLDS 9
C+SLDS
Sbjct: 459 CKSLDS 464
12|Sequence|56|65|SLDSSNSGFG
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 SLDSSNSGFG 10
S+D+S GFG
Sbjct: 416 SVDTSQPGFG 425
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 SLDSSNSGFG 10
SLDS G+G
Sbjct: 461 SLDSYGQGWG 470
>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)
Query: 3 DSSNSGFG 10
DSSN+G G
Sbjct: 530 DSSNTGAG 537
>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)
Query: 3 DSSNSGFG 10
DSSN+G G
Sbjct: 530 DSSNTGAG 537
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 SLDSSNSGFG 10
+LDS + G+G
Sbjct: 460 TLDSFDQGWG 469
13|Sequence|61|70|NSGFGPEEDT
>sp|MC007_MCV1|PROTEIN MC007|Molluscum contagiosum virus subtype 1
Query: 2 SGFGPEEDT 10
SGF P ED+
Sbjct: 185 SGFSPPEDS 193
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 4 FGPEED 9
+GPE+D
Sbjct: 2000 YGPEQD 2005
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 1 NSGFGPEE 8
NSGF P++
Sbjct: 864 NSGFDPDK 871
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 NSGFGPEE 8
NSGF P++
Sbjct: 864 NSGFDPDK 871
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 4 FGPEED 9
+GPE+D
Sbjct: 2000 YGPEQD 2005
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 4 FGPEED 9
+GPE+D
Sbjct: 2000 YGPEQD 2005
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 5 GPEEDT 10
GPEE+T
Sbjct: 2057 GPEENT 2062
Query: 4 FGPEED 9
+GPE+D
Sbjct: 2000 YGPEQD 2005
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 4 FGPEED 9
+GPE+D
Sbjct: 2000 YGPEQD 2005
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 4 FGPEED 9
+GPE+D
Sbjct: 2000 YGPEQD 2005
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 4 FGPEED 9
+GPE+D
Sbjct: 2013 YGPEQD 2018
>sp|PP65_HCMVM|65 kDa phosphoprotein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 SGFGPEEDT 10
S PEEDT
Sbjct: 460 STVAPEEDT 468
>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 SGFGPEEDT 10
S PEEDT
Sbjct: 450 STVAPEEDT 458
>sp|PP65_HCMVA|65 kDa phosphoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 SGFGPEEDT 10
S PEEDT
Sbjct: 460 STVAPEEDT 468
>sp|US03_HHV2H|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 2 (strain HG52)
Query: 2 SGFGPEE 8
+GF PEE
Sbjct: 154 TGFTPEE 160
>sp|NEC2_HHV7J|NUCLEAR egress protein 2|Human herpesvirus 7 (strain JI)
Query: 3 GFGPEEDT 10
FGPE ++
Sbjct: 147 AFGPESES 154
>sp|CEP2_HCMVA|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain AD169)
Query: 4 FGPEEDT 10
F PE+D+
Sbjct: 47 FSPEDDS 53
>sp|NEC2_HHV6Z|NUCLEAR egress protein 2|Human herpesvirus 6B (strain Z29)
Query: 3 GFGPEEDT 10
FGPE ++
Sbjct: 150 AFGPENES 157
>sp|NEC2_HHV6U|NUCLEAR egress protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 GFGPEEDT 10
FGPE ++
Sbjct: 150 AFGPENES 157
>sp|US23_HCMVA|TEGUMENT protein US23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 GFGPEEDT 10
GF EEDT
Sbjct: 516 GFDLEEDT 523
>sp|US23_HCMVM|PROTEIN US23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 GFGPEEDT 10
GF EEDT
Sbjct: 516 GFDLEEDT 523
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 NSGFGPEED 9
N G+GP D
Sbjct: 467 NQGWGPLTD 475
>sp|VE1_HPV11|REPLICATION protein E1|Human papillomavirus 11
Query: 1 NSGFGPEEDT 10
N G G E DT
Sbjct: 156 NGGDGQERDT 165
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 4 FGPEED 9
+GPE D
Sbjct: 2013 YGPERD 2018
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 4 FGPEED 9
+GPE D
Sbjct: 2006 YGPERD 2011
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 4 FGPEED 9
+GPE D
Sbjct: 2013 YGPERD 2018
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 4 FGPEED 9
+GPE D
Sbjct: 2008 YGPERD 2013
>sp|VIRF4_HHV8P|VIRAL IRF4-like protein|Human herpesvirus 8 type P
Query: 3 GFGPEED 9
G+GPE+
Sbjct: 642 GYGPEQS 648
>sp|PAP_HHV8P|DNA polymerase processivity factor|Human herpesvirus 8 type P
Query: 4 FGPEED 9
FGP ED
Sbjct: 342 FGPLED 347
14|Sequence|66|75|PEEDTAYLDG
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PEEDTAYLDG 10
P E+T Y DG
Sbjct: 1045 PGEETFYTDG 1054
>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)
Query: 1 PEEDTAYLD 9
PE++TA+ D
Sbjct: 2010 PEKNTAHTD 2018
>sp|VU54_HHV6Z|PROTEIN U54|Human herpesvirus 6B (strain Z29)
Query: 1 PEEDTAYL 8
PEE T YL
Sbjct: 151 PEEPTRYL 158
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PEEDTAYLDG 10
PE +LDG
Sbjct: 426 PERQAGFLDG 435
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 1 PEEDTAYL 8
PEE TA+L
Sbjct: 925 PEELTAFL 932
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 1 PEEDTAYL 8
PEE TA+L
Sbjct: 925 PEELTAFL 932
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 1 PEEDTAYL 8
PEE TA+L
Sbjct: 925 PEELTAFL 932
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 1 PEEDTAYL 8
PE+D A+L
Sbjct: 486 PEKDIAFL 493
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 1 PEEDTAYL 8
PE+D A+L
Sbjct: 486 PEKDIAFL 493
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 1 PEEDTAYLD 9
P+++ AYLD
Sbjct: 734 PDDEAAYLD 742
>sp|UL01_HCMVA|GLYCOPROTEIN UL1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 DTAYLDG 10
DT YLD
Sbjct: 59 DTVYLDA 65
>sp|AN_HHV7J|ALKALINE nuclease|Human herpesvirus 7 (strain JI)
Query: 3 EDTAYLD 9
EDT YL+
Sbjct: 412 EDTEYLE 418
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 2 EEDTAYLD 9
EED Y+D
Sbjct: 1991 EEDPDYMD 1998
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 PEEDTAYLD 9
P E+ +YL+
Sbjct: 1491 PPEEVSYLE 1499
>sp|RIR2_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Oka
Query: 2 EEDTAYLD 9
E+D YLD
Sbjct: 38 EDDYQYLD 45
>sp|RIR2_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Dumas)
Query: 2 EEDTAYLD 9
E+D YLD
Sbjct: 38 EDDYQYLD 45
>sp|VU54_HHV6U|PROTEIN U54|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PEEDTAY 7
PEE T Y
Sbjct: 151 PEEPTRY 157
>sp|NCAP_RABVD|NUCLEOPROTEIN virus (strain China/DRV) (RABV)
Query: 1 PEEDTAYL 8
P++D +YL
Sbjct: 67 PDDDCSYL 74
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 PEEDTAYLDG 10
PE AY+ G
Sbjct: 195 PEHQLAYVGG 204
15|Sequence|71|80|AYLDGVSLPD
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 YLDGVSLP 9
YL+GV LP
Sbjct: 809 YLNGVQLP 816
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 YLDGVSLP 9
YL+GV LP
Sbjct: 809 YLNGVQLP 816
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 YLDGVSLP 9
YL+GV LP
Sbjct: 809 YLNGVQLP 816
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 YLDGVSLP 9
YL+GV LP
Sbjct: 809 YLNGVQLP 816
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 YLDGVSLP 9
YL+GV LP
Sbjct: 806 YLNGVQLP 813
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 YLDGVSLP 9
YL+GV LP
Sbjct: 806 YLNGVQLP 813
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 YLDGVSLP 9
YL+GV LP
Sbjct: 806 YLNGVQLP 813
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 YLDGVSLP 9
YL+GV LP
Sbjct: 806 YLNGVQLP 813
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 YLDGVSLP 9
YL+GV LP
Sbjct: 809 YLNGVQLP 816
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 YLDGVSLP 9
YL+G+ LP
Sbjct: 807 YLNGIQLP 814
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 YLDGVSLP 9
YL+G+ LP
Sbjct: 807 YLNGIQLP 814
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 4 DGVSLPD 10
+GV+LPD
Sbjct: 1199 NGVTLPD 1205
>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60
Query: 3 LDGVSLPD 10
+DG SLPD
Sbjct: 268 IDGDSLPD 275
>sp|VD4L_CWPXG|ANKYRIN repeat protein D4L/I2R|Cowpox virus (strain GRI-90 /
Query: 1 AYLDGVSLPD 10
AY+ GVS+ D
Sbjct: 585 AYISGVSMFD 594
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 2 YLDGVSL 8
+LDGVS+
Sbjct: 2006 FLDGVSM 2012
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 YLDGVSLPD 10
+LD +SLP+
Sbjct: 3819 FLDEMSLPE 3827
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 3 LDGVSLP 9
+DGV LP
Sbjct: 1919 VDGVQLP 1925
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 2 YLDGVSL 8
+LDGV+L
Sbjct: 1995 FLDGVNL 2001
>sp|RAP94_MONPV|RNA polymerase-associated transcription-specificity factor
Query: 3 LDGVSLP 9
+DG+S+P
Sbjct: 217 IDGLSIP 223
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 YLDGVSL 8
++DG+SL
Sbjct: 1248 FIDGISL 1254
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 YLDGVSL 8
++DG+SL
Sbjct: 1248 FIDGISL 1254
>sp|RAP94_VARV|RNA polymerase-associated transcription-specificity factor
Query: 3 LDGVSLP 9
+DG+S+P
Sbjct: 217 IDGLSIP 223
>sp|RAP94_VAR67|RNA polymerase-associated transcription-specificity factor
Query: 3 LDGVSLP 9
+DG+S+P
Sbjct: 217 IDGLSIP 223
>sp|RAP94_VACCC|RNA polymerase-associated transcription-specificity factor
Query: 3 LDGVSLP 9
+DG+S+P
Sbjct: 217 IDGLSIP 223
>sp|RAP94_VACCA|RNA polymerase-associated transcription-specificity factor
Query: 3 LDGVSLP 9
+DG+S+P
Sbjct: 217 IDGLSIP 223
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 YLDGVSLPD 10
+LDG+S D
Sbjct: 794 FLDGLSYDD 802
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 YLDGVSLPD 10
+LDG+S D
Sbjct: 793 FLDGLSYDD 801
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 YLDGVSLPD 10
+LDG+S D
Sbjct: 793 FLDGLSYDD 801
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 LDGVSLP 9
L+G++LP
Sbjct: 521 LEGINLP 527
16|Sequence|76|85|VSLPDFELLS
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 VSLPDFELLS 10
VSLPD +L S
Sbjct: 2157 VSLPDTDLES 2166
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 3 LPDFEL 8
+PDF+L
Sbjct: 929 IPDFDL 934
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 LPDFEL 8
+PDF+L
Sbjct: 929 IPDFDL 934
17|Sequence|81|90|FELLSDPEDE
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 5 SDPEDE 10
SDPEDE
Sbjct: 3057 SDPEDE 3062
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 FELLSDP 7
+ELLSDP
Sbjct: 39 YELLSDP 45
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 FELLSDP 7
+ELLSDP
Sbjct: 39 YELLSDP 45
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 FELLSDP 7
+ELLSDP
Sbjct: 39 YELLSDP 45
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 4 LSDPEDE 10
LSDPEDE
Sbjct: 582 LSDPEDE 588
>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3
Query: 4 LSDPEDE 10
L+DPEDE
Sbjct: 632 LTDPEDE 638
>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10
Query: 4 LSDPEDE 10
L+DPEDE
Sbjct: 654 LTDPEDE 660
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 FELLSDP 7
F+LL+DP
Sbjct: 1453 FKLLNDP 1459
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 2 ELLSDPEDE 10
ELL+D ED+
Sbjct: 44 ELLTDGEDD 52
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 2 ELLSDPEDE 10
ELL+D ED+
Sbjct: 44 ELLTDGEDD 52
>sp|MATRX_MUMPZ|MATRIX protein|Mumps virus genotype N (strain
Query: 3 LLSDPEDE 10
+L+DPE E
Sbjct: 223 MLNDPEGE 230
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 2 ELLSDPEDE 10
ELL+D ED+
Sbjct: 44 ELLTDGEDD 52
>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28
Query: 4 LSDPEDE 10
L+DP+DE
Sbjct: 635 LTDPDDE 641
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 2 ELLSDPEDE 10
ELL+D ED+
Sbjct: 44 ELLTDGEDD 52
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d
Query: 2 ELLSDPEDE 10
ELL+D ED+
Sbjct: 44 ELLTDGEDD 52
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 2 ELLSDPEDE 10
ELL+D ED+
Sbjct: 44 ELLTDGEDD 52
>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29
Query: 4 LSDPEDE 10
L+DP+DE
Sbjct: 633 LTDPDDE 639
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 FELLSDP 7
F+L++DP
Sbjct: 1459 FQLMNDP 1465
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 FELLSDP 7
F+L++DP
Sbjct: 1455 FQLMNDP 1461
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 FELLSDP 7
F+L++DP
Sbjct: 1459 FQLMNDP 1465
>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41
Query: 4 LSDPEDE 10
L DPEDE
Sbjct: 588 LKDPEDE 594
>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4
Query: 4 LSDPEDE 10
L+DPE+E
Sbjct: 573 LTDPEEE 579
>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65
Query: 4 LSDPEDE 10
L+DPE+E
Sbjct: 572 LTDPEEE 578
>sp|MCES_VARV|MRNA-CAPPING enzyme regulatory subunit|Variola virus
Query: 1 FELLSDPED 9
F +L+DP D
Sbjct: 230 FSILNDPVD 238
>sp|MCES_VAR67|MRNA-CAPPING enzyme regulatory subunit OPG124|Variola virus (isolate
Query: 1 FELLSDPED 9
F +L+DP D
Sbjct: 230 FSILNDPVD 238
>sp|VIRF3_HHV8P|VIRAL IRF3-like protein|Human herpesvirus 8 type P
Query: 1 FELLSDPED 9
F+LL PED
Sbjct: 274 FDLLGIPED 282
>sp|MCES_MONPV|MRNA-CAPPING enzyme regulatory subunit OPG124|Monkeypox virus (MPXV)
Query: 1 FELLSDPED 9
F +L+DP D
Sbjct: 230 FSILNDPVD 238
>sp|MCES_VACCC|MRNA-CAPPING enzyme regulatory subunit OPG124|Vaccinia virus (strain Copenhagen)
Query: 1 FELLSDPED 9
F +L+DP D
Sbjct: 230 FSILNDPVD 238
>sp|VE7_HPV33|PROTEIN E7|Human papillomavirus 33
Query: 1 FELLSDPEDE 10
+E LSD DE
Sbjct: 25 YEQLSDSSDE 34
>sp|VL2_HPV29|MINOR capsid protein L2|Human papillomavirus 29
Query: 6 DPEDE 10
DPEDE
Sbjct: 258 DPEDE 262
>sp|NSP1_ROT41|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 3 LLSDPEDE 10
L+SD ED+
Sbjct: 484 LISDSEDD 491
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 2 ELLSDPEDE 10
+++SD EDE
Sbjct: 30 DVISDDEDE 38
>sp|AN_HHV8P|SHUTOFF alkaline exonuclease|Human herpesvirus 8 type P
Query: 3 LLSDPED 9
+L+DP+D
Sbjct: 344 VLTDPQD 350
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 4 LSDPEDE 10
LSD EDE
Sbjct: 578 LSDQEDE 584
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 2 ELLSDPEDE 10
+++SD EDE
Sbjct: 30 DVISDDEDE 38
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 3 LLSDPED 9
L SDPED
Sbjct: 903 LDSDPED 909
18|Sequence|86|95|DPEDEHLCAN
>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)
Query: 1 DPEDEHLCA 9
+ EDEHL A
Sbjct: 469 NSEDEHLLA 477
>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)
Query: 1 DPEDEHLCA 9
+ EDEHL A
Sbjct: 469 NSEDEHLLA 477
>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)
Query: 1 DPEDEHLCA 9
+ EDEHL A
Sbjct: 464 NSEDEHLLA 472
>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)
Query: 1 DPEDEHLCA 9
+ EDEHL A
Sbjct: 469 NSEDEHLLA 477
>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)
Query: 1 DPEDEHLCA 9
+ EDEHL A
Sbjct: 464 NSEDEHLLA 472
>sp|NSP2_ROTJ1|NON-STRUCTURAL protein 2|Rotavirus X (strain
Query: 1 DPEDEHLC 8
+P EHLC
Sbjct: 181 EPVSEHLC 188
>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)
Query: 1 DPEDEHLCA 9
+ EDEHL A
Sbjct: 471 NSEDEHLLA 479
>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)
Query: 1 DPEDEHLCA 9
+ EDEHL A
Sbjct: 460 NSEDEHLLA 468
>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)
Query: 1 DPEDEHLCA 9
+ EDEHL A
Sbjct: 471 NSEDEHLLA 479
>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)
Query: 1 DPEDEHLCA 9
+ EDEHL A
Sbjct: 462 NSEDEHLLA 470
>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)
Query: 1 DPEDEHLCA 9
+ EDEHL A
Sbjct: 461 NSEDEHLLA 469
>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)
Query: 1 DPEDEHLCA 9
+ EDEHL A
Sbjct: 470 NSEDEHLLA 478
>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong
Query: 1 DPEDEHLCA 9
+ EDEHL A
Sbjct: 461 NSEDEHLLA 469
>sp|NSP2_ROTB2|NON-STRUCTURAL protein 2|Rotavirus X (isolate
Query: 1 DPEDEHLC 8
+P EHLC
Sbjct: 181 EPVSEHLC 188
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 3 EDEHLCAN 10
ED+ LC N
Sbjct: 1726 EDDSLCTN 1733
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 3 EDEHLCAN 10
ED+ LC N
Sbjct: 1726 EDDSLCTN 1733
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 DPEDE 5
DPEDE
Sbjct: 3058 DPEDE 3062
>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A
Query: 2 PEDEHL 7
PED HL
Sbjct: 362 PEDTHL 367
>sp|HEPA_HHV6Z|DNA helicase/primase complex-associated protein|Human herpesvirus 6B
Query: 2 PEDEHL 7
PED HL
Sbjct: 362 PEDTHL 367
>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DPEDEHLCA 9
DP E +CA
Sbjct: 166 DPVHESICA 174
>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DPEDEHLCA 9
DP E +CA
Sbjct: 165 DPVHESICA 173
>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10
Query: 1 DPEDE 5
DPEDE
Sbjct: 656 DPEDE 660
>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3
Query: 1 DPEDE 5
DPEDE
Sbjct: 634 DPEDE 638
>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52
Query: 2 PEDEHLCAN 10
P +H+C N
Sbjct: 107 PRAKHICVN 115
>sp|US10_HHV2H|VIRION protein US10|Human herpesvirus 2 (strain HG52)
Query: 1 DPEDEHLC 8
DP D H C
Sbjct: 72 DPHDPHGC 79
>sp|UL29_HCMVA|UNCHARACTERIZED protein UL29|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DPEDEHLCA 9
DP E +CA
Sbjct: 166 DPVHESICA 174
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PEDEH 6
PED+H
Sbjct: 47 PEDKH 51
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 4 DEHLC 8
+EHLC
Sbjct: 809 EEHLC 813
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 4 DEHLC 8
+EHLC
Sbjct: 809 EEHLC 813
19|Sequence|91|100|HLCANLMQLL
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 2 LCANLM 7
LCAN+M
Sbjct: 809 LCANIM 814
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 2 LCANLM 7
LCAN+M
Sbjct: 809 LCANIM 814
>sp|EP84_HCMVM|EARLY phosphoprotein p84|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LCANLMQ 8
LCA +MQ
Sbjct: 59 LCATIMQ 65
>sp|EP84_HCMVA|EARLY phosphoprotein p84|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LCANLMQ 8
LCA +MQ
Sbjct: 59 LCATIMQ 65
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 3 CANLM 7
CANLM
Sbjct: 808 CANLM 812
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 3 CANLM 7
CANLM
Sbjct: 808 CANLM 812
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 3 CANLM 7
CANLM
Sbjct: 797 CANLM 801
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 3 CANLM 7
CANLM
Sbjct: 798 CANLM 802
>sp|UL19_HCMVM|UNCHARACTERIZED protein UL19|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 CANLMQLL 10
CA+LM+ L
Sbjct: 68 CASLMETL 75
>sp|UL19_HCMVA|UNCHARACTERIZED protein UL19|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 CANLMQLL 10
CA+LM+ L
Sbjct: 68 CASLMETL 75
20|Sequence|96|105|LMQLLQESLA
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 2 MQLLQESL 9
M L+QES+
Sbjct: 1270 MNLIQESI 1277
21|Sequence|101|110|QESLAQARLG
***** No hits found ******
22|Sequence|106|115|QARLGSRRPA
>sp|ICP27_HHV11|MRNA export factor|Human herpesvirus 1 (strain 17)
Query: 2 ARLGSRRPA 10
+RLG+RRP+
Sbjct: 106 SRLGARRPS 114
>sp|ICP27_HHV1E|MRNA export factor|Human herpesvirus 1 (strain HFEM)
Query: 2 ARLGSRRPA 10
+RLG+RRP+
Sbjct: 106 SRLGARRPS 114
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 QARLGS 6
QARLGS
Sbjct: 295 QARLGS 300
>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate
Query: 5 GSRRP 9
GSRRP
Sbjct: 249 GSRRP 253
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 2 ARLGSRRP 9
ARLG RP
Sbjct: 4 ARLGVMRP 11
>sp|CEP2_HHV11|CYTOPLASMIC envelopment protein 2|Human herpesvirus 1 (strain 17)
Query: 1 QARLGSRRP 9
A+LG RRP
Sbjct: 1 MAQLGPRRP 9
>sp|VL1_HPV44|MAJOR capsid protein L1|Human papillomavirus 44
Query: 3 RLGSRRPA 10
R+G +RPA
Sbjct: 478 RVGRKRPA 485
>sp|VL1_HPV26|MAJOR capsid protein L1|Human papillomavirus type 26
Query: 1 QARLGSRRP 9
+ +LG++RP
Sbjct: 478 RPKLGTKRP 486
>sp|VL1_HPV69|MAJOR capsid protein L1|Human papillomavirus 69
Query: 1 QARLGSRRP 9
+ +LG++RP
Sbjct: 479 RPKLGTKRP 487
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 1 QARLGSRRPA 10
QAR S RPA
Sbjct: 1078 QARAPSTRPA 1087
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 4 LGSRRP 9
LG+RRP
Sbjct: 31 LGARRP 36
>sp|ICP27_HHV2H|MRNA export factor|Human herpesvirus 2 (strain HG52)
Query: 2 ARLGSRRPA 10
+RLG+RR A
Sbjct: 106 SRLGTRRSA 114
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 4 LGSRRP 9
LG+RRP
Sbjct: 485 LGARRP 490
23|Sequence|111|120|SRRPARLLMP
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 RPARLLMP 10
RPA LLMP
Sbjct: 814 RPAFLLMP 821
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 RPARLLMP 10
RPA LLMP
Sbjct: 814 RPAFLLMP 821
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 SRRPARLLM 9
R+PARL++
Sbjct: 2581 GRKPARLIV 2589
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 SRRPARLLM 9
R+PARL++
Sbjct: 2570 GRKPARLIV 2578
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SRRPARLLM 9
R+PARL++
Sbjct: 2572 GRKPARLIV 2580
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SRRPARLLM 9
R+PARL++
Sbjct: 2572 GRKPARLIV 2580
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 SRRPARLLM 9
R+PARL++
Sbjct: 2573 GRKPARLIV 2581
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 SRRPARLLM 9
R+PARL++
Sbjct: 2578 GRKPARLIV 2586
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 SRRPARLLM 9
R+PARL++
Sbjct: 2575 GRKPARLIV 2583
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SRRPARLLM 9
R+PARL++
Sbjct: 2572 GRKPARLIV 2580
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 SRRPARLLM 9
R+PARL++
Sbjct: 2584 GRKPARLIV 2592
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 SRRPARLLM 9
R+PARL++
Sbjct: 2580 GRKPARLIV 2588
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SRRPARLLM 9
R+PARL++
Sbjct: 2572 GRKPARLIV 2580
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SRRPARLLM 9
R+PARL++
Sbjct: 2572 GRKPARLIV 2580
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 SRRPARLLM 9
R+PARL++
Sbjct: 2581 GRKPARLIV 2589
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SRRPARLLM 9
R+PARL++
Sbjct: 2572 GRKPARLIV 2580
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 SRRPARLLM 9
R+PARL++
Sbjct: 2573 GRKPARLIV 2581
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SRRPARLLM 9
R+PARL++
Sbjct: 2572 GRKPARLIV 2580
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 SRRPARLLM 9
R+PARL++
Sbjct: 2585 GRKPARLIV 2593
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SRRPARLLM 9
R+PARL++
Sbjct: 2573 GRKPARLIV 2581
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 SRRPARLLM 9
R+PARL++
Sbjct: 2581 GRKPARLIV 2589
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 SRRPARLLM 9
R+PARL++
Sbjct: 2573 GRKPARLIV 2581
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 SRRPARLLM 9
R+PARL++
Sbjct: 2573 GRKPARLIV 2581
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 SRRPARLLM 9
R+PARL++
Sbjct: 2583 GRKPARLIV 2591
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 SRRPARLLM 9
++PARL++
Sbjct: 2576 GKKPARLIV 2584
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 SRRPARLLM 9
++PARL++
Sbjct: 2595 GKKPARLIV 2603
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 SRRPARLLM 9
++PARL++
Sbjct: 2595 GKKPARLIV 2603
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 SRRPARLLM 9
++PARL++
Sbjct: 2599 GKKPARLIV 2607
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 SRRPARLLM 9
++PARL++
Sbjct: 2595 GKKPARLIV 2603
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 SRRPARLLM 9
++PARL++
Sbjct: 2576 GKKPARLIV 2584
>sp|VL2_HPV31|MINOR capsid protein L2|Human papillomavirus 31
Query: 2 RRPARL 7
RRPARL
Sbjct: 215 RRPARL 220
24|Sequence|116|125|RLLMPSQLVS
>sp|PB1F2_I45A0|PROTEIN PB1-F2|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 1 RLLMPSQLV 9
R++MP Q+V
Sbjct: 48 RVVMPKQIV 56
>sp|NS1_I57A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Singapore/1/1957
Query: 2 LLMPSQLVS 10
+LMP Q VS
Sbjct: 104 MLMPKQKVS 112
25|Sequence|121|130|SQLVSQVGKE
>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus
Query: 2 QLVSQVGK 9
QLV QVGK
Sbjct: 8 QLVLQVGK 15
>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate
Query: 2 QLVSQVGK 9
QLV QVGK
Sbjct: 8 QLVLQVGK 15
>sp|ETF2_VACCT|EARLY transcription factor 82 kDa|Vaccinia virus (strain Tian Tan)
Query: 2 QLVSQVGK 9
QLV QVGK
Sbjct: 8 QLVLQVGK 15
>sp|ETF2_VACCC|EARLY transcription factor 82 kDa|Vaccinia virus (strain Copenhagen)
Query: 2 QLVSQVGK 9
QLV QVGK
Sbjct: 8 QLVLQVGK 15
>sp|ETF2_VACCA|EARLY transcription factor 82 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 QLVSQVGK 9
QLV QVGK
Sbjct: 8 QLVLQVGK 15
>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)
Query: 2 QLVSQVGK 9
QLV QVGK
Sbjct: 8 QLVLQVGK 15
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SQLVSQVGKE 10
SQ++S VG++
Sbjct: 391 SQILSMVGQQ 400
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 1 SQLVSQVGKE 10
SQ++S VG++
Sbjct: 391 SQILSMVGQQ 400
26|Sequence|126|135|QVGKELLRLA
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 4 KELLRL 9
KELLRL
Sbjct: 504 KELLRL 509
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GKELLR 8
GKE+LR
Sbjct: 451 GKEILR 456
>sp|PG204_VARV|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus
Query: 1 QVGKELL 7
Q GKEL+
Sbjct: 204 QTGKELI 210
>sp|PG204_VAR67|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus (isolate
Query: 1 QVGKELL 7
Q GKEL+
Sbjct: 204 QTGKELI 210
>sp|PG204_VACCC|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain
Query: 1 QVGKELL 7
Q GKEL+
Sbjct: 203 QTGKELI 209
>sp|PG204_MONPV|SOLUBLE interferon alpha/beta receptor OPG204|Monkeypox virus (MPXV)
Query: 1 QVGKELL 7
Q GKEL+
Sbjct: 201 QAGKELI 207
27|Sequence|131|140|LLRLAYSEPC
>sp|NCAP_PI1HC|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 1 LLRLAYSEP 9
LL +AYS P
Sbjct: 78 LLAMAYSSP 86
>sp|NCAP_PI1HA|NUCLEOPROTEIN parainfluenza 1 virus (strains
Query: 1 LLRLAYSEP 9
LL +AYS P
Sbjct: 78 LLAMAYSSP 86
>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 LRLAYSEP 9
RLA SEP
Sbjct: 428 FRLAVSEP 435
>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 LRLAYSEP 9
RLA SEP
Sbjct: 428 FRLAVSEP 435
>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 2 LRLAYSEP 9
RLA SEP
Sbjct: 427 FRLAVSEP 434
>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 LRLAYSEP 9
RLA SEP
Sbjct: 428 FRLAVSEP 435
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 LLRLAYSEP 9
L+R +YS+P
Sbjct: 1977 LIRSSYSDP 1985
>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 LRLAYSEPC 10
LR+A SEP
Sbjct: 499 LRIAISEPS 507
>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 LRLAYSEPC 10
LR+A SEP
Sbjct: 514 LRIAISEPS 522
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 LLRLAYSEP 9
+LR +YS+P
Sbjct: 1978 ILRSSYSDP 1986
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 LLRLAYSEP 9
+LR +YS+P
Sbjct: 1978 ILRSSYSDP 1986
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 LLRLAYSEP 9
+LR +YS+P
Sbjct: 1978 ILRSSYSDP 1986
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 LLRLAYS 7
L+RLAY+
Sbjct: 1030 LIRLAYN 1036
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 LLRLAYS 7
L+RLAY+
Sbjct: 1031 LIRLAYN 1037
>sp|ENV_HTL1M|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 5 AYSEPC 10
+YS+PC
Sbjct: 103 SYSDPC 108
>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 5 AYSEPC 10
+YS+PC
Sbjct: 103 SYSDPC 108
>sp|ENV_HTL1N|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 5 AYSEPC 10
+YS+PC
Sbjct: 103 SYSDPC 108
>sp|ENV_HTL1L|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 5 AYSEPC 10
+YS+PC
Sbjct: 103 SYSDPC 108
>sp|ENV_HTL1F|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 5 AYSEPC 10
+YS+PC
Sbjct: 103 SYSDPC 108
>sp|ENV_HTL1A|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 5 AYSEPC 10
+YS+PC
Sbjct: 103 SYSDPC 108
>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 5 AYSEPC 10
+YS+PC
Sbjct: 101 SYSDPC 106
>sp|ENV_HTL1C|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 5 AYSEPC 10
+YS+PC
Sbjct: 103 SYSDPC 108
>sp|SF33K_ADE05|PROTEIN 33K|Human adenovirus C serotype 5
Query: 2 LRLAYSEPC 10
LRLA +EP
Sbjct: 150 LRLAPNEPV 158
>sp|SF33K_ADE02|PROTEIN 33K|Human adenovirus C serotype 2
Query: 2 LRLAYSEPC 10
LRLA +EP
Sbjct: 149 LRLAPNEPV 157
28|Sequence|136|145|YSEPCGLRGA
>sp|ENV_HTL1L|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 YSEPCGLR 8
YS+PC L+
Sbjct: 104 YSDPCSLK 111
>sp|ENV_HTL1F|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 YSEPCGLR 8
YS+PC L+
Sbjct: 104 YSDPCSLK 111
>sp|ENV_HTL1N|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 YSEPCGLR 8
YS+PC L+
Sbjct: 104 YSDPCSLK 111
>sp|ENV_HTL1M|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 YSEPCGLR 8
YS+PC L+
Sbjct: 104 YSDPCSLK 111
>sp|ENV_HTL1A|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 YSEPCGLR 8
YS+PC L+
Sbjct: 104 YSDPCSLK 111
>sp|ENV_HTL1C|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 YSEPCGLR 8
YS+PC L+
Sbjct: 104 YSDPCSLK 111
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 SEPCGLRGA 10
+E CG RGA
Sbjct: 1077 TEHCGNRGA 1085
>sp|NSP1B_ROTGI|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate RVB/Rat/United
Query: 4 PCGLR 8
PCGLR
Sbjct: 100 PCGLR 104
>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 YSEPCGLR 8
YS+PC ++
Sbjct: 102 YSDPCAIQ 109
Query: 1 YSEPCG 6
+S+PCG
Sbjct: 35 HSDPCG 40
>sp|X_HBVC8|PROTEIN X|Hepatitis B virus genotype C
Query: 2 SEPCGLR 8
+EPC LR
Sbjct: 66 AEPCALR 72
>sp|NSP1B_ROTGA|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate
Query: 4 PCGLR 8
PCGL+
Sbjct: 100 PCGLK 104
>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 YSEPCGLR 8
YS+PC ++
Sbjct: 104 YSDPCAIQ 111
Query: 1 YSEPCG 6
+S+PCG
Sbjct: 37 HSDPCG 42
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 4 PCGLRGA 10
P G+RGA
Sbjct: 1191 PLGIRGA 1197
>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47
Query: 2 SEPCG 6
+EPCG
Sbjct: 172 AEPCG 176
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 1 YSEPCGLRG 9
+SEPC L
Sbjct: 856 FSEPCFLHN 864
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 1 YSEPCGLRG 9
+SEPC L
Sbjct: 856 FSEPCFLHN 864
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 4 PCGLRGA 10
P G+RGA
Sbjct: 1191 PLGVRGA 1197
>sp|PG145_MONPV|TRANSCRIPT termination protein OPG145|Monkeypox virus (MPXV)
Query: 1 YSEPC 5
YS PC
Sbjct: 50 YSSPC 54
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 5 CGLRG 9
CGLRG
Sbjct: 224 CGLRG 228
>sp|CEP2_HHV6Z|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6B (strain Z29)
Query: 3 EPCGLR 8
EPC L+
Sbjct: 300 EPCALK 305
29|Sequence|141|150|GLRGALLDVC
>sp|AN_HCMVM|ALKALINE nuclease|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GLRGALLDVC 10
GL GA +D+C
Sbjct: 247 GLLGASMDLC 256
>sp|AN_HCMVA|ALKALINE nuclease|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GLRGALLDVC 10
GL GA +D+C
Sbjct: 247 GLLGASMDLC 256
>sp|BRRF1_EBVG|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 GLRGALLDVC 10
G+R + DVC
Sbjct: 160 GMRKVIADVC 169
>sp|BRRF1_EBVB9|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 GLRGALLDVC 10
G+R + DVC
Sbjct: 160 GMRKVIADVC 169
>sp|BRRF1_EBVA8|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 GLRGALLDVC 10
G+R + DVC
Sbjct: 160 GMRKVIADVC 169
>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)
Query: 2 LRGALLDVC 10
L ALLD+C
Sbjct: 436 LAAALLDLC 444
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 4 GALLDVC 10
ALLD+C
Sbjct: 454 AALLDLC 460
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 RGALLDV 9
RGA++D+
Sbjct: 3073 RGAVMDI 3079
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 RGALLDV 9
RGA++D+
Sbjct: 3073 RGAVMDI 3079
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 GLRGAL 6
GLRGA+
Sbjct: 1286 GLRGAI 1291
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 GLRGAL 6
GLRGA+
Sbjct: 1286 GLRGAI 1291
>sp|SPIK2_ADE41|FIBER protein 2|Human adenovirus F serotype 41
Query: 1 GLRGALLDV 9
GL+GAL ++
Sbjct: 271 GLKGALREM 279
>sp|SPIK2_ADE40|FIBER protein 2|Human adenovirus F serotype 40
Query: 1 GLRGALLDV 9
GL+GAL ++
Sbjct: 271 GLKGALREM 279
30|Sequence|146|155|LLDVCVEQGK
>sp|VE2_HPV55|REGULATORY protein E2|Human papillomavirus type 55
Query: 2 LDVCVEQ 8
LDVC EQ
Sbjct: 8 LDVCQEQ 14
>sp|VE2_HPV44|REGULATORY protein E2|Human papillomavirus 44
Query: 2 LDVCVEQ 8
LDVC EQ
Sbjct: 8 LDVCQEQ 14
>sp|VE2_HPV40|REGULATORY protein E2|Human papillomavirus 40
Query: 2 LDVCVEQ 8
LD+C EQ
Sbjct: 8 LDLCQEQ 14
>sp|VE2_HPV07|REGULATORY protein E2|Human papillomavirus 7
Query: 2 LDVCVEQ 8
LD+C EQ
Sbjct: 8 LDLCQEQ 14
>sp|U79_HHV7J|PROTEIN U79|Human herpesvirus 7 (strain JI)
Query: 2 LDVCVEQGK 10
LD+C E G+
Sbjct: 73 LDICTEGGQ 81
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 4 VCVEQGK 10
+C+EQ K
Sbjct: 486 ICIEQQK 492
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 1 LLDVCVE 7
+LD+C++
Sbjct: 803 ILDICID 809
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 2 LDVCVEQGK 10
LDVC++ +
Sbjct: 451 LDVCLDMAR 459
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 LLDVCVE 7
LLD C E
Sbjct: 654 LLDTCFE 660
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 1 LLDVCVE 7
LLD C E
Sbjct: 654 LLDTCFE 660
>sp|VE2_HPV54|REGULATORY protein E2|Human papillomavirus type 54
Query: 2 LDVCVEQ 8
LDVC E+
Sbjct: 8 LDVCQER 14
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 LLDVCVEQGK 10
+ C E+GK
Sbjct: 1269 IFRACTEEGK 1278
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 LLDVCV 6
LDVCV
Sbjct: 1771 FLDVCV 1776
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 1 LLDVCVE 7
++DVC++
Sbjct: 117 IIDVCID 123
31|Sequence|151|160|VEQGKSCHSV
>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)
Query: 2 EQGKSCHS 9
E GK CH+
Sbjct: 489 EAGKDCHA 496
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 3 QGKSCHS 9
+GK CHS
Sbjct: 468 EGKCCHS 474
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 GKSCHSV 10
GKSC SV
Sbjct: 1051 GKSCTSV 1057
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 GKSCHSV 10
GKSC SV
Sbjct: 1051 GKSCTSV 1057
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 VEQGKS 6
VEQGKS
Sbjct: 1913 VEQGKS 1918
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 VEQGKS 6
VEQGKS
Sbjct: 1913 VEQGKS 1918
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 VEQGKS 6
VEQGKS
Sbjct: 1914 VEQGKS 1919
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 VEQGKS 6
VEQGKS
Sbjct: 1914 VEQGKS 1919
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 VEQGKS 6
VEQGKS
Sbjct: 1916 VEQGKS 1921
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 VEQGKS 6
VEQGKS
Sbjct: 1916 VEQGKS 1921
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 VEQGKS 6
VEQGKS
Sbjct: 1921 VEQGKS 1926
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 VEQGKS 6
VEQGKS
Sbjct: 1913 VEQGKS 1918
>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 VEQGKSCH 8
+EQGK+ H
Sbjct: 497 LEQGKAPH 504
>sp|PORTL_HHV7J|PORTAL protein|Human herpesvirus 7 (strain JI)
Query: 3 QGKSCHSV 10
+G+S HSV
Sbjct: 74 KGQSIHSV 81
>sp|UL39_HCMVA|UNCHARACTERIZED protein UL39|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 QGKSCHSV 10
QG++ HSV
Sbjct: 93 QGQNAHSV 100
>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)
Query: 2 EQGKSCH 8
E+GK C+
Sbjct: 208 EEGKKCY 214
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 QGKSCH 8
QGKS H
Sbjct: 860 QGKSLH 865
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 QGKSCH 8
QGKS H
Sbjct: 860 QGKSLH 865
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 4 GKSCH 8
GK CH
Sbjct: 167 GKKCH 171
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 4 GKSCH 8
GK CH
Sbjct: 167 GKKCH 171
>sp|VL1_HPV44|MAJOR capsid protein L1|Human papillomavirus 44
Query: 3 QGKSCHSV 10
+GK C++V
Sbjct: 168 KGKQCNNV 175
32|Sequence|156|165|SCHSVGQLAL
>sp|ORF11_HHV8P|PROTEIN ORF11|Human herpesvirus 8 type P
Query: 1 SCHSVGQL 8
SC SVGQ+
Sbjct: 56 SCPSVGQI 63
>sp|LF2_EBVB9|PROTEIN LF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 CHSVGQL 8
C SVGQ+
Sbjct: 71 CPSVGQI 77
>sp|LF2_EBVA8|PROTEIN LF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 CHSVGQL 8
C SVGQ+
Sbjct: 71 CPSVGQI 77
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 CHSVGQL 8
CH G+L
Sbjct: 1533 CHETGRL 1539
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 CHSVGQL 8
CH G+L
Sbjct: 1533 CHETGRL 1539
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 CHSVGQL 8
CH G+L
Sbjct: 1533 CHETGRL 1539
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 CHSVGQL 8
CH G+L
Sbjct: 1533 CHETGRL 1539
>sp|LF2_EBVG|PROTEIN LF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 CHSVGQL 8
C SVGQ+
Sbjct: 71 CPSVGQI 77
>sp|U79_HHV7J|PROTEIN U79|Human herpesvirus 7 (strain JI)
Query: 2 CHSVGQLAL 10
CH G+L L
Sbjct: 114 CHDNGKLHL 122
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 SCHSVGQLAL 10
+CHS LAL
Sbjct: 793 ACHSGTLLAL 802
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 SCHSVGQLAL 10
+CHS LAL
Sbjct: 790 ACHSGTLLAL 799
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 SCHSVGQLAL 10
+CHS LAL
Sbjct: 789 ACHSGTLLAL 798
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 SCHSVGQLAL 10
+CHS LAL
Sbjct: 791 ACHSGTLLAL 800
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 SCHSVGQLAL 10
+CHS LAL
Sbjct: 791 ACHSGTLLAL 800
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 SCHSVGQLAL 10
+CHS LAL
Sbjct: 791 ACHSGTLLAL 800
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 SCHSVGQLAL 10
+CHS LAL
Sbjct: 790 ACHSGTLLAL 799
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 SCHSVGQLAL 10
+CHS LAL
Sbjct: 791 ACHSGTLLAL 800
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 SCHSVGQLAL 10
+CHS LAL
Sbjct: 791 ACHSGTLLAL 800
>sp|VE7_HPV69|PROTEIN E7|Human papillomavirus 69
Query: 2 CHSVGQLAL 10
C+S+ QLA+
Sbjct: 68 CNSIVQLAV 76
33|Sequence|161|170|GQLALDPSLV
>sp|SCAF_HHV2H|CAPSID scaffolding protein|Human herpesvirus 2 (strain HG52)
Query: 1 GQLALDPSLV 10
G+LALDP V
Sbjct: 36 GELALDPDTV 45
>sp|SCAF_HHV11|CAPSID scaffolding protein|Human herpesvirus 1 (strain 17)
Query: 1 GQLALDPSLV 10
G+LALDP V
Sbjct: 36 GELALDPDTV 45
>sp|NCAP_INBAC|NUCLEOPROTEIN B virus (strain B/Ann
Query: 2 QLALDPSLV 10
++ LDPSL+
Sbjct: 217 RVGLDPSLI 225
>sp|NCAP_INBAA|NUCLEOPROTEIN B virus (strain B/Ann
Query: 2 QLALDPSLV 10
++ LDPSL+
Sbjct: 217 RVGLDPSLI 225
>sp|NCAP_INBP9|NUCLEOPROTEIN B virus (strain B/Panama/45/1990)
Query: 2 QLALDPSLV 10
++ LDPSL+
Sbjct: 217 RVGLDPSLI 225
>sp|NCAP_INBSI|NUCLEOPROTEIN B virus (strain B/Singapore/222/1979)
Query: 2 QLALDPSLV 10
++ LDPSL+
Sbjct: 217 RVGLDPSLI 225
>sp|NCAP_INBAD|NUCLEOPROTEIN B virus (strain B/Ann
Query: 2 QLALDPSLV 10
++ LDPSL+
Sbjct: 217 RVGLDPSLI 225
>sp|NCAP_INBLE|NUCLEOPROTEIN B virus (strain B/Lee/1940)
Query: 2 QLALDPSLV 10
++ LDPSL+
Sbjct: 217 RVGLDPSLI 225
>sp|ORF1_HPBVH|UNCHARACTERIZED ORF1 protein|Human picobirnavirus (strain
Query: 1 GQLALD 6
GQLALD
Sbjct: 107 GQLALD 112
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 1 GQLALDPS 8
G+L DPS
Sbjct: 903 GKLVFDPS 910
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 QLALDPSLV 10
Q DPSL+
Sbjct: 4411 QFVTDPSLI 4419
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 QLALDPSLV 10
+ ALDP L+
Sbjct: 43 RFALDPGLL 51
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 QLALDPSLV 10
+ ALDP L+
Sbjct: 43 RFALDPGLL 51
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 QLALDPSLV 10
+ ALDP L+
Sbjct: 43 RFALDPGLL 51
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 2 QLALDPSL 9
LALDP L
Sbjct: 715 HLALDPYL 722
>sp|GAG_HV192|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 QLALDPSLV 10
+ ALDP L+
Sbjct: 43 RFALDPGLL 51
>sp|GAG_HV193|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 QLALDPSLV 10
+ ALDP L+
Sbjct: 43 RFALDPGLL 51
>sp|UL84_HCMVT|UL84 protein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 GQLALDPS 8
G+L LDP+
Sbjct: 347 GRLELDPN 354
>sp|UL84_HCMVM|PROTEIN UL84|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GQLALDPS 8
G+L LDP+
Sbjct: 347 GRLELDPN 354
>sp|UL84_HCMVA|PROTEIN UL84|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GQLALDPS 8
G+L LDP+
Sbjct: 346 GRLELDPN 353
>sp|GAG_HV1VI|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 QLALDPSLV 10
+ ALDP L+
Sbjct: 43 RFALDPGLL 51
34|Sequence|166|175|DPSLVPTFQL
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 PSLVPTF 8
PSL PTF
Sbjct: 205 PSLGPTF 211
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 PSLVPTF 8
PSL PTF
Sbjct: 205 PSLGPTF 211
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 PSLVPTF 8
PSL PTF
Sbjct: 205 PSLGPTF 211
>sp|ATI_VAR67|A-TYPE inclusion protein A25 homolog|Variola virus (isolate
Query: 1 DPSLVPT 7
DP+ VPT
Sbjct: 383 DPNYVPT 389
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 PSLVPTF 8
PSL PTF
Sbjct: 205 PSLGPTF 211
>sp|NS1_I57A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/RI/5-/1957
Query: 1 DPSLVPTFQL 10
DP+ V +FQ+
Sbjct: 2 DPNTVSSFQV 11
>sp|NEP_I83A1|NUCLEAR export protein|Influenza A virus (strain A/Chile/1/1983
Query: 1 DPSLVPTFQ 9
DP+ V +FQ
Sbjct: 2 DPNTVSSFQ 10
>sp|NEP_I80AA|NUCLEAR export protein|Influenza A virus (strain A/India/6263/1980
Query: 1 DPSLVPTFQ 9
DP+ V +FQ
Sbjct: 2 DPNTVSSFQ 10
>sp|NEP_I77AB|NUCLEAR export protein|Influenza A virus (strain A/USSR/90/1977
Query: 1 DPSLVPTFQ 9
DP+ V +FQ
Sbjct: 2 DPNTVSSFQ 10
>sp|NEP_I77AA|NUCLEAR export protein|Influenza A virus (strain A/Brazil/11/1978
Query: 1 DPSLVPTFQ 9
DP+ V +FQ
Sbjct: 2 DPNTVSSFQ 10
>sp|NEP_I60A0|NUCLEAR export protein|Influenza A virus (strain A/Ann
Query: 1 DPSLVPTFQ 9
DP+ V +FQ
Sbjct: 2 DPNTVSSFQ 10
>sp|NEP_I57A5|NUCLEAR export protein|Influenza A virus (strain A/Singapore/1/1957
Query: 1 DPSLVPTFQ 9
DP+ V +FQ
Sbjct: 2 DPNTVSSFQ 10
>sp|NEP_I57A3|NUCLEAR export protein|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 1 DPSLVPTFQ 9
DP+ V +FQ
Sbjct: 2 DPNTVSSFQ 10
>sp|NEP_I57A2|NUCLEAR export protein|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 1 DPSLVPTFQ 9
DP+ V +FQ
Sbjct: 2 DPNTVSSFQ 10
>sp|NEP_I57A1|NUCLEAR export protein|Influenza A virus (strain A/Leningrad/134/1957
Query: 1 DPSLVPTFQ 9
DP+ V +FQ
Sbjct: 2 DPNTVSSFQ 10
>sp|NEP_I57A0|NUCLEAR export protein|Influenza A virus (strain A/Japan/305/1957
Query: 1 DPSLVPTFQ 9
DP+ V +FQ
Sbjct: 2 DPNTVSSFQ 10
>sp|NEP_I54A2|NUCLEAR export protein|Influenza A virus (strain
Query: 1 DPSLVPTFQ 9
DP+ V +FQ
Sbjct: 2 DPNTVSSFQ 10
>sp|NEP_I54A0|NUCLEAR export protein|Influenza A virus (strain A/Leningrad/1/1954
Query: 1 DPSLVPTFQ 9
DP+ V +FQ
Sbjct: 2 DPNTVSSFQ 10
>sp|NEP_I51A0|NUCLEAR export protein|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 DPSLVPTFQ 9
DP+ V +FQ
Sbjct: 2 DPNTVSSFQ 10
>sp|NEP_I50A0|NUCLEAR export protein|Influenza A virus (strain A/Fort
Query: 1 DPSLVPTFQ 9
DP+ V +FQ
Sbjct: 2 DPNTVSSFQ 10
>sp|NEP_I47A0|NUCLEAR export protein|Influenza A virus (strain A/Fort
Query: 1 DPSLVPTFQ 9
DP+ V +FQ
Sbjct: 2 DPNTVSSFQ 10
>sp|NEP_I45A0|NUCLEAR export protein|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 1 DPSLVPTFQ 9
DP+ V +FQ
Sbjct: 2 DPNTVSSFQ 10
>sp|NEP_I43A0|NUCLEAR export protein|Influenza A virus (strain A/USA:Iowa/1943
Query: 1 DPSLVPTFQ 9
DP+ V +FQ
Sbjct: 2 DPNTVSSFQ 10
>sp|NEP_I40A0|NUCLEAR export protein|Influenza A virus (strain A/Hickox/1940
Query: 1 DPSLVPTFQ 9
DP+ V +FQ
Sbjct: 2 DPNTVSSFQ 10
>sp|NEP_I36A0|NUCLEAR export protein|Influenza A virus (strain A/Henry/1936
Query: 1 DPSLVPTFQ 9
DP+ V +FQ
Sbjct: 2 DPNTVSSFQ 10
>sp|NEP_I35A3|NUCLEAR export protein|Influenza A virus (strain A/USA:Phila/1935
Query: 1 DPSLVPTFQ 9
DP+ V +FQ
Sbjct: 2 DPNTVSSFQ 10
>sp|NEP_I34A1|NUCLEAR export protein|Influenza A virus (strain A/Puerto
Query: 1 DPSLVPTFQ 9
DP+ V +FQ
Sbjct: 2 DPNTVSSFQ 10
>sp|NEP_I33A0|NUCLEAR export protein|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 DPSLVPTFQ 9
DP+ V +FQ
Sbjct: 2 DPNTVSSFQ 10
>sp|NEP_I06A0|NUCLEAR export protein|Influenza A virus (strain
Query: 1 DPSLVPTFQ 9
DP+ V +FQ
Sbjct: 2 DPNTVSSFQ 10
>sp|NEP_I000X|NUCLEAR export protein|Influenza A virus (strain A/X-31
Query: 1 DPSLVPTFQ 9
DP+ V +FQ
Sbjct: 2 DPNTVSSFQ 10
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 PSLVPTF 8
PSL PTF
Sbjct: 205 PSLGPTF 211
>sp|NEP_I03A1|NUCLEAR export protein|Influenza A virus (strain
Query: 1 DPSLVPTFQ 9
DP+ V +FQ
Sbjct: 2 DPNTVSSFQ 10
>sp|NS1_I45A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 1 DPSLVPTFQL 10
DP+ V +FQ+
Sbjct: 2 DPNTVSSFQV 11
>sp|NS1_I47A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Fort
Query: 1 DPSLVPTFQL 10
DP+ V +FQ+
Sbjct: 2 DPNTVSSFQV 11
>sp|NS1_I77AB|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USSR/90/1977
Query: 1 DPSLVPTFQL 10
DP+ V +FQ+
Sbjct: 2 DPNTVSSFQV 11
>sp|NS1_I77AA|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Brazil/11/1978
Query: 1 DPSLVPTFQL 10
DP+ V +FQ+
Sbjct: 2 DPNTVSSFQV 11
>sp|NS1_I57A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Singapore/1/1957
Query: 1 DPSLVPTFQL 10
DP+ V +FQ+
Sbjct: 2 DPNTVSSFQV 11
>sp|NS1_I57A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Japan/305/1957
Query: 1 DPSLVPTFQL 10
DP+ V +FQ+
Sbjct: 2 DPNTVSSFQV 11
>sp|NS1_I54A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 DPSLVPTFQL 10
DP+ V +FQ+
Sbjct: 2 DPNTVSSFQV 11
>sp|NS1_I51A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 DPSLVPTFQL 10
DP+ V +FQ+
Sbjct: 2 DPNTVSSFQV 11
>sp|NS1_I40A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hickox/1940
Query: 1 DPSLVPTFQL 10
DP+ V +FQ+
Sbjct: 2 DPNTVSSFQV 11
>sp|NS1_I83A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chile/1/1983
Query: 1 DPSLVPTFQL 10
DP+ V +FQ+
Sbjct: 2 DPNTVSSFQV 11
>sp|NS1_I80AA|NON-STRUCTURAL protein 1|Influenza A virus (strain A/India/6263/1980
Query: 1 DPSLVPTFQL 10
DP+ V +FQ+
Sbjct: 2 DPNTVSSFQV 11
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 1 DPSLVPT 7
DP VPT
Sbjct: 384 DPDYVPT 390
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 DPSLVPTFQ 9
DP++ PT++
Sbjct: 1643 DPTVPPTYK 1651
>sp|NS1_I50A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Fort
Query: 1 DPSLVPTFQL 10
DP+ V +FQ+
Sbjct: 2 DPNTVSSFQV 11
>sp|NS1_I33A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 DPSLVPTFQL 10
DP+ V +FQ+
Sbjct: 2 DPNTVSSFQV 11
>sp|NS1_I54A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/1/1954
Query: 1 DPSLVPTFQL 10
DP+ V +FQ+
Sbjct: 2 DPNTVSSFQV 11
>sp|NS1_I34A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Puerto
Query: 1 DPSLVPTFQL 10
DP+ V +FQ+
Sbjct: 2 DPNTVSSFQV 11
>sp|NS1_I06A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 DPSLVPTFQL 10
DP+ V +FQ+
Sbjct: 2 DPNTVSSFQV 11
>sp|NS1_I03A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Shantou/4231/2003
Query: 1 DPSLVPTFQL 10
DP+ V +FQ+
Sbjct: 2 DPNTVSSFQV 11
>sp|NS1_I000X|NON-STRUCTURAL protein 1|Influenza A virus (strain A/X-31
Query: 1 DPSLVPTFQL 10
DP+ V +FQ+
Sbjct: 2 DPNTVSSFQV 11
>sp|NS1_I36A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Henry/1936
Query: 1 DPSLVPTFQL 10
DP+ V +FQ+
Sbjct: 2 DPNTVSSFQV 11
>sp|NS1_I35A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Phila/1935
Query: 1 DPSLVPTFQL 10
DP+ V +FQ+
Sbjct: 2 DPNTVSSFQV 11
>sp|NS1_I57A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 1 DPSLVPTFQL 10
DP+ V +FQ+
Sbjct: 2 DPNTVSSFQV 11
>sp|NS1_I57A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 1 DPSLVPTFQL 10
DP+ V +FQ+
Sbjct: 2 DPNTVSSFQV 11
>sp|NS1_I57A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/134/1957
Query: 1 DPSLVPTFQL 10
DP+ V +FQ+
Sbjct: 2 DPNTVSSFQV 11
>sp|NS1_I43A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Iowa/1943
Query: 1 DPSLVPTFQL 10
DP+ V +FQ+
Sbjct: 2 DPNTVSSFQV 11
>sp|NS1_I60A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Ann
Query: 1 DPSLVPTFQL 10
DP+ V +FQ+
Sbjct: 2 DPNTVSSFQV 11
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 1 DPSLVPTF 8
DP L+P F
Sbjct: 714 DPHLLPPF 721
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 1 DPSLVPTFQL 10
DP PTF++
Sbjct: 590 DPCTQPTFEI 599
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 1 DPSLVPT 7
DP+L+P+
Sbjct: 592 DPALLPS 598
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 1 DPSLVPT 7
DP+L+P+
Sbjct: 592 DPALLPS 598
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 1 DPSLVPT 7
DP+L+P+
Sbjct: 592 DPALLPS 598
>sp|VE2_HPV03|REGULATORY protein E2|Human papillomavirus 3
Query: 1 DPSLVPTFQL 10
DP VP L
Sbjct: 298 DPDCVPVIHL 307
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 DPSLVPTFQL 10
DP +VP L
Sbjct: 1253 DPDIVPMAHL 1262
>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)
Query: 1 DPSLVPT 7
DP+L+P+
Sbjct: 587 DPALLPS 593
35|Sequence|171|180|PTFQLTLVLR
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 1 PTFQLT 6
P FQLT
Sbjct: 560 PVFQLT 565
36|Sequence|176|185|TLVLRLDSRL
>sp|NEF_HV1S1|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 LVLRLDSRL 10
LV R DSRL
Sbjct: 183 LVWRFDSRL 191
>sp|NEF_HV1B9|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 LVLRLDSRL 10
LV R DSRL
Sbjct: 180 LVWRFDSRL 188
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 4 LRLDSRL 10
LR+D+RL
Sbjct: 721 LRMDARL 727
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 4 LRLDSRL 10
LR+D+RL
Sbjct: 721 LRMDARL 727
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 4 LRLDSRL 10
LR+D+RL
Sbjct: 721 LRMDARL 727
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 4 LRLDSRL 10
LR+D+RL
Sbjct: 721 LRMDARL 727
37|Sequence|181|190|LDSRLWPKIQ
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 3 SRLWPKIQ 10
S LWPK+Q
Sbjct: 217 STLWPKLQ 224
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 3 SRLWPKIQ 10
S LWPK+Q
Sbjct: 1548 STLWPKLQ 1555
>sp|UL121_HCMVM|MEMBRANE protein UL121|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LDSRLWPKIQ 10
LD RLW +IQ
Sbjct: 47 LDQRLWWEIQ 56
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 3 SRLWPKIQ 10
S LWP++Q
Sbjct: 1549 STLWPRLQ 1556
>sp|UL121_HCMVA|MEMBRANE protein UL121|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LDSRLWPKIQ 10
LD RLW +IQ
Sbjct: 47 LDQRLWWEIQ 56
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 3 SRLWPKIQ 10
S LWP++Q
Sbjct: 1549 STLWPRLQ 1556
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 3 SRLWPKIQ 10
+ LWP++Q
Sbjct: 1551 TTLWPRVQ 1558
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 5 LWPKIQ 10
LWP++Q
Sbjct: 1555 LWPRLQ 1560
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 LDSRLWPK 8
LD++LW K
Sbjct: 135 LDTKLWEK 142
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 LDSRLWPK 8
LD++LW K
Sbjct: 135 LDTKLWEK 142
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 LDSRLWPK 8
LD++LW K
Sbjct: 135 LDTKLWEK 142
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 LDSRLW 6
LDS++W
Sbjct: 135 LDSKMW 140
>sp|BRRF1_EBVG|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 LDSRLWPKIQ 10
LD RLW I+
Sbjct: 117 LDDRLWALIR 126
>sp|BRRF1_EBVB9|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LDSRLWPKIQ 10
LD RLW I+
Sbjct: 117 LDDRLWALIR 126
>sp|BRRF1_EBVA8|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 LDSRLWPKIQ 10
LD RLW I+
Sbjct: 117 LDDRLWALIR 126
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 5 LWPKI 9
LWPK+
Sbjct: 420 LWPKV 424
>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 5 LWPKI 9
LWPK+
Sbjct: 420 LWPKV 424
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 4 RLWPKI 9
RL+PKI
Sbjct: 1744 RLYPKI 1749
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 6 WPKIQ 10
WPKI+
Sbjct: 1758 WPKIE 1762
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 5 LWPKI 9
LWPK+
Sbjct: 420 LWPKV 424
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 LDSRLW 6
LDSR W
Sbjct: 135 LDSRSW 140
>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)
Query: 1 LDSRLWPK 8
+DS WPK
Sbjct: 528 VDSGKWPK 535
>sp|PA_INBP9|POLYMERASE acidic protein|Influenza B virus (strain B/Panama/45/1990)
Query: 1 LDSRLWPK 8
+DS WPK
Sbjct: 528 VDSGKWPK 535
>sp|PA_INBAC|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 1 LDSRLWPK 8
+DS WPK
Sbjct: 528 VDSGKWPK 535
>sp|PA_INBSI|POLYMERASE acidic protein|Influenza B virus (strain B/Singapore/222/1979)
Query: 1 LDSRLWPK 8
+DS WPK
Sbjct: 527 VDSGKWPK 534
>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 1 LDSRLWPK 8
+DS WPK
Sbjct: 528 VDSGKWPK 535
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 2 DSRLWPKIQ 10
+++ WPKI+
Sbjct: 411 NNKRWPKIK 419
>sp|GLYCO_ABLVB|GLYCOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 LDSRLWPK 8
L SR++PK
Sbjct: 168 LHSRMFPK 175
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 1 LDSRLWPK 8
L SRLW +
Sbjct: 1960 LSSRLWSE 1967
38|Sequence|186|195|WPKIQGLFSS
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 WPKIQG 6
WP +QG
Sbjct: 855 WPMMQG 860
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 WPKIQG 6
WP +QG
Sbjct: 839 WPMMQG 844
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 3 KIQGLFSS 10
KIQ LFS+
Sbjct: 1086 KIQNLFSA 1093
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 KIQGLFSS 10
KIQ LFS+
Sbjct: 1086 KIQNLFSA 1093
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 2 PKIQGLFSS 10
PK +GLF +
Sbjct: 336 PKTRGLFGA 344
>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 WPKIQG 6
WP +QG
Sbjct: 393 WPVMQG 398
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 2 PKIQGL 7
PK+QGL
Sbjct: 337 PKLQGL 342
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 3 KIQGLFSS 10
K+Q LFSS
Sbjct: 1837 KVQFLFSS 1844
>sp|UNG_HHV8P|URACIL-DNA glycosylase|Human herpesvirus 8 type P
Query: 1 WPKIQG 6
WP+ QG
Sbjct: 224 WPRFQG 229
>sp|HBSAG_HBVA1|LARGE envelope protein|Hepatitis B virus genotype A1
Query: 2 PKIQGLF 8
P+++GLF
Sbjct: 134 PRVRGLF 140
>sp|REX_HTL1A|PROTEIN Rex|Human T-cell leukemia virus 1
Query: 1 WPKIQGL 7
WP QGL
Sbjct: 20 WPTSQGL 26
>sp|REX_HTL1L|PROTEIN Rex|Human T-cell leukemia virus 1
Query: 1 WPKIQGL 7
WP QGL
Sbjct: 20 WPTSQGL 26
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 2 PKIQGL 7
PK QGL
Sbjct: 337 PKFQGL 342
>sp|HBSAG_HBVG3|LARGE envelope protein|Hepatitis B virus genotype G
Query: 2 PKIQGLF 8
PK++GL+
Sbjct: 133 PKVRGLY 139
>sp|VE2_HPV09|REGULATORY protein E2|Human papillomavirus 9
Query: 1 WPKIQG 6
W K+QG
Sbjct: 146 WEKVQG 151
>sp|VE2_HPV42|REGULATORY protein E2|Human papillomavirus 42
Query: 1 WPKIQG 6
W K+QG
Sbjct: 146 WCKVQG 151
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 KIQGLFS 9
KI+G+FS
Sbjct: 829 KIKGVFS 835
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 KIQGLFS 9
KI+G+FS
Sbjct: 829 KIKGVFS 835
>sp|VE2_HPV49|REGULATORY protein E2|Human papillomavirus type 49
Query: 1 WPKIQG 6
W K+QG
Sbjct: 146 WQKVQG 151
39|Sequence|191|200|GLFSSANSPF
>sp|PG062_VACCP|TRUNCATED phosphoprotein OPG062|Vaccinia virus (strain L-IVP) (VACV)
Query: 3 FSSANSPF 10
F+SA++PF
Sbjct: 5 FASAHTPF 12
>sp|GCVK_HHV7J|PROBABLE ganciclovir kinase|Human herpesvirus 7 (strain JI)
Query: 1 GLFSSANSPF 10
G+F +SPF
Sbjct: 139 GIFERIHSPF 148
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 GLFSSANSPF 10
G SSA SPF
Sbjct: 972 GPLSSAWSPF 981
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 GLFSSANSPF 10
G SSA SPF
Sbjct: 972 GPLSSAWSPF 981
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 GLFSSANSPF 10
G SSA SPF
Sbjct: 972 GPLSSAWSPF 981
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 GLFSSANSPF 10
G SSA SPF
Sbjct: 966 GPLSSAWSPF 975
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 GLFSSANSPF 10
G SSA SPF
Sbjct: 966 GPLSSAWSPF 975
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 GLFSSANSPF 10
G SSA SPF
Sbjct: 964 GPLSSAWSPF 973
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 1 GLFSSANSPF 10
G SSA SPF
Sbjct: 963 GPLSSAWSPF 972
>sp|PG062_VACCT|PHOSPHOPROTEIN OPG062|Vaccinia virus (strain Tian Tan)
Query: 3 FSSANSPF 10
F+SA++PF
Sbjct: 5 FASAHTPF 12
>sp|PG062_VACCC|PHOSPHOPROTEIN OPG062|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 FSSANSPF 10
F+SA++PF
Sbjct: 5 FASAHTPF 12
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GLFSSANSP 9
GLF + SP
Sbjct: 593 GLFQAVGSP 601
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GLFSSANSP 9
GLF + SP
Sbjct: 593 GLFQAVGSP 601
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 2 LFSSANSPF 10
LFSS+N F
Sbjct: 693 LFSSSNVSF 701
>sp|UL127_HCMVA|UNCHARACTERIZED protein UL127|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LFSSANSPF 10
LF++A SPF
Sbjct: 123 LFTAAYSPF 131
>sp|PG062_VARV|PHOSPHOPROTEIN OPG062|Variola virus
Query: 3 FSSANSPF 10
F+SA++PF
Sbjct: 5 FASAHTPF 12
>sp|PG062_VAR67|PHOSPHOPROTEIN OPG062|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 FSSANSPF 10
F+SA++PF
Sbjct: 5 FASAHTPF 12
>sp|VL2_HPV13|MINOR capsid protein L2|Human papillomavirus 13
Query: 1 GLFSSANSPF 10
G SSA++PF
Sbjct: 368 GSLSSASTPF 377
>sp|ICP27_HHV2H|MRNA export factor|Human herpesvirus 2 (strain HG52)
Query: 3 FSSANSPF 10
F +ANSP+
Sbjct: 285 FPAANSPW 292
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 1 GLFSSANSPF 10
G SSA SPF
Sbjct: 964 GPISSAWSPF 973
>sp|ICP27_HHV11|MRNA export factor|Human herpesvirus 1 (strain 17)
Query: 3 FSSANSPF 10
F +ANSP+
Sbjct: 285 FPAANSPW 292
>sp|ICP27_HHV6Z|MRNA export factor ICP27 homolog|Human herpesvirus 6B (strain Z29)
Query: 2 LFSSANSP 9
+FS NSP
Sbjct: 170 IFSLTNSP 177
>sp|ICP27_HHV1E|MRNA export factor|Human herpesvirus 1 (strain HFEM)
Query: 3 FSSANSPF 10
F +ANSP+
Sbjct: 284 FPAANSPW 291
>sp|ICP27_HHV6U|MRNA export factor ICP27 homolog|Human herpesvirus 6A (strain
Query: 2 LFSSANSP 9
+FS NSP
Sbjct: 169 IFSLTNSP 176
>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)
Query: 1 GLFSSANSPF 10
G+FS +PF
Sbjct: 675 GVFSFLKNPF 684
40|Sequence|196|205|ANSPFLPGFS
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 2 NSPFLP 7
NSPF+P
Sbjct: 562 NSPFVP 567
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 2 NSPFLPGF 9
++P LPGF
Sbjct: 344 SAPILPGF 351
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 2 NSPFLPGF 9
++P LPGF
Sbjct: 344 SAPILPGF 351
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 2 NSPFLP 7
NSPF+P
Sbjct: 571 NSPFVP 576
>sp|NCAP_I76AF|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1976/1931
Query: 1 ANSPFLPGF 9
A SP +P F
Sbjct: 471 ATSPIVPSF 479
>sp|NCAP_I54A1|NUCLEOPROTEIN A virus (strain A/Swine/May/1954
Query: 1 ANSPFLPGF 9
A SP +P F
Sbjct: 471 ATSPIVPSF 479
>sp|NCAP_I49A2|NUCLEOPROTEIN A virus (strain A/Swine/41/1949
Query: 1 ANSPFLPGF 9
A SP +P F
Sbjct: 471 ATSPIVPSF 479
>sp|NCAP_I46A1|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1946
Query: 1 ANSPFLPGF 9
A SP +P F
Sbjct: 471 ATSPIVPSF 479
>sp|NCAP_I42A0|NUCLEOPROTEIN A virus (strain A/Swine/Jamesburg/1942
Query: 1 ANSPFLPGF 9
A SP +P F
Sbjct: 471 ATSPIVPSF 479
>sp|NCAP_I37A0|NUCLEOPROTEIN A virus (strain A/Swine/29/1937
Query: 1 ANSPFLPGF 9
A SP +P F
Sbjct: 471 ATSPIVPSF 479
>sp|NCAP_I35A2|NUCLEOPROTEIN A virus (strain A/Swine/Ohio/23/1935
Query: 1 ANSPFLPGF 9
A SP +P F
Sbjct: 471 ATSPIVPSF 479
>sp|NCAP_I30A0|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/15/1930
Query: 1 ANSPFLPGF 9
A SP +P F
Sbjct: 471 ATSPIVPSF 479
>sp|NCAP_I18A0|NUCLEOPROTEIN A virus (strain A/Brevig
Query: 1 ANSPFLPGF 9
A SP +P F
Sbjct: 471 ATSPIVPSF 479
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 2 NSPFLP 7
NSPF+P
Sbjct: 571 NSPFVP 576
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 2 NSPFLPGF 9
+SP +PGF
Sbjct: 858 SSPIIPGF 865
>sp|VPU_HV1VI|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 4 PFLPG 8
PF+PG
Sbjct: 72 PFIPG 76
>sp|VPU_HV193|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 4 PFLPG 8
PF+PG
Sbjct: 72 PFIPG 76
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 4 PFLPGFS 10
PF P FS
Sbjct: 91 PFTPDFS 97
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 4 PFLPGFS 10
PF P FS
Sbjct: 90 PFTPDFS 96
>sp|NCAP_I54A0|NUCLEOPROTEIN A virus (strain A/Leningrad/1/1954
Query: 1 ANSPFLPGF 9
A SP +P F
Sbjct: 471 AASPIVPSF 479
>sp|NCAP_I36A0|NUCLEOPROTEIN A virus (strain A/Henry/1936
Query: 1 ANSPFLPGF 9
A SP +P F
Sbjct: 471 AASPIVPSF 479
>sp|NCAP_I35A3|NUCLEOPROTEIN A virus (strain A/USA:Phila/1935
Query: 1 ANSPFLPGF 9
A SP +P F
Sbjct: 471 AASPIVPSF 479
>sp|NCAP_I35A1|NUCLEOPROTEIN A virus (strain A/Swine/Cambridge/1/1935
Query: 1 ANSPFLPGF 9
A SP +P F
Sbjct: 471 AASPIVPSF 479
>sp|NCAP_I34A1|NUCLEOPROTEIN A virus (strain A/Puerto
Query: 1 ANSPFLPGF 9
A SP +P F
Sbjct: 471 AASPIVPSF 479
>sp|NCAP_I33A0|NUCLEOPROTEIN A virus (strain A/Wilson-Smith/1933
Query: 1 ANSPFLPGF 9
A SP +P F
Sbjct: 471 AASPIVPSF 479
>sp|NCAP_I06A0|NUCLEOPROTEIN A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 ANSPFLPGF 9
A SP +P F
Sbjct: 471 AASPIVPSF 479
>sp|REP_HCYV5|REPLICATION-ASSOCIATED protein|Human associated cyclovirus 1 (isolate
Query: 2 NSPFLPGF 9
N+P L GF
Sbjct: 46 NTPHLQGF 53
>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus
Query: 4 PFLPGF 9
P++PGF
Sbjct: 301 PYVPGF 306
>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 NSPFLPGFS 10
+SP L GFS
Sbjct: 651 SSPQLEGFS 659
>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 NSPFLPGFS 10
+SP L GFS
Sbjct: 651 SSPQLEGFS 659
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 1 ANSPF 5
ANSPF
Sbjct: 598 ANSPF 602
>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1
Query: 1 ANSPFLPG 8
A +PFLPG
Sbjct: 239 AYNPFLPG 246
>sp|BEL2_SFV3L|PROTEIN Bel-2|Simian foamy virus type 3
Query: 1 ANSPFLP 7
NSP LP
Sbjct: 48 GNSPILP 54
>sp|US30_HCMVA|UNCHARACTERIZED protein HHRF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 NSPFLP 7
N PFLP
Sbjct: 16 NVPFLP 21
>sp|US30_HCMVM|UNCHARACTERIZED protein US30|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 NSPFLP 7
N PFLP
Sbjct: 16 NVPFLP 21
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 4 PFLPGFS 10
PF P FS
Sbjct: 90 PFSPDFS 96
>sp|ORF58_HHV8P|PROTEIN ORF58|Human herpesvirus 8 type P
Query: 4 PFLPG 8
PF+PG
Sbjct: 102 PFIPG 106
>sp|SCP_EBVB9|SMALL capsomere-interacting protein|Epstein-Barr virus (strain B95-8)
Query: 2 NSPFLPGFS 10
+SP LP F
Sbjct: 20 DSPLLPKFQ 28
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 1 ANSPFLPGFS 10
+P LPG S
Sbjct: 791 TKNPILPGVS 800
>sp|ORF23_TTVV4|PROBABLE protein VP2|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 2 NSPFLPG 8
+P+LPG
Sbjct: 208 ETPYLPG 214
>sp|K7_HHV8P|PROTEIN K7|Human herpesvirus 8 type P
Query: 1 ANSPFLP 7
A SP+LP
Sbjct: 19 AQSPWLP 25
41|Sequence|201|210|LPGFSQSLTL
>sp|TAX_HTLV2|PROTEIN Tax-2|Human T-cell leukemia virus 2
Query: 1 LPGFSQSL 8
PGF QSL
Sbjct: 4 FPGFGQSL 11
>sp|TAX_HTL32|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 1 LPGFSQSL 8
PGF QSL
Sbjct: 4 FPGFGQSL 11
>sp|TAX_HTL3P|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 1 LPGFSQSL 8
PGF QSL
Sbjct: 4 FPGFGQSL 11
>sp|TAX_HTL1F|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 LPGFSQSL 8
PGF QSL
Sbjct: 4 FPGFGQSL 11
>sp|TAX_HTL1C|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 LPGFSQSL 8
PGF QSL
Sbjct: 4 FPGFGQSL 11
>sp|TAX_HTL1A|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 LPGFSQSL 8
PGF QSL
Sbjct: 4 FPGFGQSL 11
>sp|TAX_HTL1L|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 LPGFSQSL 8
PGF QSL
Sbjct: 4 FPGFGQSL 11
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 LPGFSQS 7
PGF QS
Sbjct: 542 FPGFKQS 548
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LPGFSQS 7
PGF QS
Sbjct: 542 FPGFKQS 548
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 LPGFSQS 7
PGF QS
Sbjct: 542 FPGFKQS 548
42|Sequence|206|215|QSLTLSTGFR
>sp|SPIK1_ADE41|FIBER protein 1|Human adenovirus F serotype 41
Query: 1 QSLTLSTG 8
++LTLSTG
Sbjct: 215 ENLTLSTG 222
>sp|SPIK1_ADE40|FIBER protein 1|Human adenovirus F serotype 40
Query: 1 QSLTLSTG 8
++LTLSTG
Sbjct: 215 ENLTLSTG 222
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 QSLTLSTG 8
+S+TL+TG
Sbjct: 2436 ESITLATG 2443
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 QSLTLSTG 8
++LTL+TG
Sbjct: 2434 EALTLATG 2441
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 QSLTLSTG 8
++LTL+TG
Sbjct: 2434 EALTLATG 2441
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 QSLTLSTG 8
+S+TL+TG
Sbjct: 2437 ESITLATG 2444
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 QSLTLSTG 8
+S+TL+TG
Sbjct: 2437 ESITLATG 2444
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 QSLTLSTG 8
++LTL+TG
Sbjct: 2435 EALTLATG 2442
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 QSLTLSTG 8
++LTL+TG
Sbjct: 2435 EALTLATG 2442
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 QSLTLSTG 8
++LTL+TG
Sbjct: 2435 EALTLATG 2442
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 QSLTLSTG 8
++LTL+TG
Sbjct: 2435 EALTLATG 2442
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 QSLTLSTG 8
++LTL+TG
Sbjct: 2435 EALTLATG 2442
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 QSLTLSTG 8
++LTL+TG
Sbjct: 2432 EALTLATG 2439
43|Sequence|211|220|STGFRVIKKK
>sp|ICP27_HHV6U|MRNA export factor ICP27 homolog|Human herpesvirus 6A (strain
Query: 2 TGFRVIKK 9
T FR IK+
Sbjct: 17 TAFRTIKR 24
>sp|PG068_VACCC|PROTEIN OPG068|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 TGFRVIKK 9
T F+V+KK
Sbjct: 165 TDFKVVKK 172
>sp|PG068_MONPV|PROTEIN OPG068|Monkeypox virus (MPXV)
Query: 2 TGFRVIKK 9
T F+V+KK
Sbjct: 165 TDFKVVKK 172
>sp|ICP27_HHV6Z|MRNA export factor ICP27 homolog|Human herpesvirus 6B (strain Z29)
Query: 2 TGFRVIKK 9
T FR IK+
Sbjct: 17 TAFRTIKR 24
>sp|PG068_VARV|PROTEIN OPG068|Variola virus
Query: 2 TGFRVIKK 9
T F+V+KK
Sbjct: 165 TDFKVVKK 172
>sp|PG068_VAR67|PROTEIN OPG068|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 TGFRVIKK 9
T F+V+KK
Sbjct: 165 TDFKVVKK 172
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 STGFRVIKK 9
STG ++I+K
Sbjct: 259 STGDKIIRK 267
44|Sequence|216|225|VIKKKLYSSE
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 VIKKKLYSS 9
+IK KL+S+
Sbjct: 3175 IIKSKLFSA 3183
45|Sequence|221|232|LYSSEQLLIEEC
>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15
Query: 1 LYSSEQLLIEEC 12
L SS+QLLI+ C
Sbjct: 204 LESSKQLLIQHC 215
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 LYSSEQLLIEEC 12
LY +++L+E+C
Sbjct: 6812 LYKMQRMLLEKC 6823
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 LYSSEQLLIEEC 12
LY +++L+E+C
Sbjct: 6789 LYKMQRMLLEKC 6800
>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37
Query: 3 SSEQLLIEEC 12
SS+QLL++ C
Sbjct: 213 SSKQLLLQHC 222
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 3 SSEQLLIEEC 12
SS+QLL++ C
Sbjct: 209 SSKQLLLQHC 218
>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17
Query: 3 SSEQLLIEEC 12
SS+QLL++ C
Sbjct: 213 SSKQLLLQHC 222
>sp|VL2_HPV1|MINOR capsid protein L2|Human papillomavirus type 1 (Human
Query: 1 LYSSEQLL 8
LYS E+LL
Sbjct: 408 LYSEEELL 415
>sp|OBP_HHV6Z|REPLICATION origin-binding protein|Human herpesvirus 6B (strain Z29)
Query: 6 QLLIEEC 12
Q+L+EEC
Sbjct: 449 QILVEEC 455
>sp|OBP_HHV6U|REPLICATION origin-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 6 QLLIEEC 12
Q+L+EEC
Sbjct: 449 QILVEEC 455
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 4 SEQLLIEEC 12
SEQ L+E C
Sbjct: 1741 SEQNLVENC 1749
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 4 SEQLLIEEC 12
SEQ L+E C
Sbjct: 1741 SEQNLVENC 1749
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 LYSSEQLLIEE 11
LYS +LLIE+
Sbjct: 637 LYSGYELLIEK 647
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 4 SEQLLIEEC 12
SEQ L+E C
Sbjct: 1741 SEQNLVENC 1749
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 3 SSEQLLIEEC 12
+SEQ++ EC
Sbjct: 1734 TSEQIIANEC 1743
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 LYSSEQLLIEE 11
LYS +LLIE+
Sbjct: 637 LYSGYELLIEK 647
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 LYSSEQLLIEE 11
LYS +LLIE+
Sbjct: 637 LYSGYELLIEK 647
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 3 SSEQLLIEEC 12
SS+QLL + C
Sbjct: 210 SSKQLLQQHC 219
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 3 SSEQLLIEEC 12
SS+QLL + C
Sbjct: 210 SSKQLLQQHC 219
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 1 LYSSEQLLIEEC 12
L SS+QLL + C
Sbjct: 207 LESSKQLLQQHC 218
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 1 LYSSEQLLIEEC 12
L SS+QLL + C
Sbjct: 205 LESSKQLLQQHC 216
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 1 LYSSEQLLIEEC 12
L SS+QLL + C
Sbjct: 206 LESSKQLLQQHC 217
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 3 SSEQLLIEEC 12
SS+QLL + C
Sbjct: 207 SSKQLLQQHC 216
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 3 SSEQLLIEEC 12
SS+QLL + C
Sbjct: 209 SSKQLLQQHC 218
>sp|CAPSD_HEVRH|CAPSID protein|Hepatitis E virus (isolate Rhesus/HT-4)
Query: 3 SSEQLLIE 10
+S+QLL+E
Sbjct: 433 ASDQLLVE 440
>sp|CAPSD_HEVPA|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 3 SSEQLLIE 10
+S+QLL+E
Sbjct: 565 ASDQLLVE 572
>sp|CAPSD_HEVMY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 3 SSEQLLIE 10
+S+QLL+E
Sbjct: 565 ASDQLLVE 572
>sp|CAPSD_HEVHY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 3 SSEQLLIE 10
+S+QLL+E
Sbjct: 565 ASDQLLVE 572
>sp|CAPSD_HEVCH|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 3 SSEQLLIE 10
+S+QLL+E
Sbjct: 565 ASDQLLVE 572
>sp|CAPSD_HEVBU|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 3 SSEQLLIE 10
+S+QLL+E
Sbjct: 565 ASDQLLVE 572
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 3 SSEQLLIEEC 12
SS+QLL + C
Sbjct: 208 SSKQLLQQHC 217
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 3 SSEQLLIEEC 12
SS+QLL + C
Sbjct: 208 SSKQLLQQHC 217
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 3 SSEQLLIEEC 12
SS+QLL + C
Sbjct: 208 SSKQLLQQHC 217
>sp|U79_HHV7J|PROTEIN U79|Human herpesvirus 7 (strain JI)
Query: 4 SEQLLIEEC 12
SEQ ++E+C
Sbjct: 172 SEQKILEDC 180
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 3 SSEQLLIEEC 12
SS+QLL + C
Sbjct: 208 SSKQLLQQHC 217
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 EQLLIEEC 12
+Q+LIE C
Sbjct: 549 DQILIEIC 556
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 EQLLIEEC 12
+Q+LIE C
Sbjct: 541 DQILIEIC 548
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 EQLLIEEC 12
+Q+LIE C
Sbjct: 549 DQILIEIC 556
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 EQLLIEEC 12
+Q+LIE C
Sbjct: 547 DQILIEIC 554
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 EQLLIEEC 12
+Q+LIE C
Sbjct: 545 DQILIEIC 552
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 EQLLIEEC 12
+Q+LIE C
Sbjct: 548 DQILIEIC 555
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 EQLLIEEC 12
+Q+LIE C
Sbjct: 553 DQILIEIC 560
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 EQLLIEEC 12
+Q+LIE C
Sbjct: 548 DQILIEIC 555
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 EQLLIEEC 12
+Q+LIE C
Sbjct: 548 DQILIEIC 555
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 EQLLIEEC 12
+Q+LIE C
Sbjct: 560 DQILIEIC 567
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 EQLLIEEC 12
+Q+LIE C
Sbjct: 560 DQILIEIC 567
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 EQLLIEEC 12
+Q+LIE C
Sbjct: 560 DQILIEIC 567
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 EQLLIEEC 12
+Q+LIE C
Sbjct: 544 DQILIEIC 551
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 3 SSEQLLIEEC 12
SS+QLL + C
Sbjct: 211 SSKQLLQQHC 220
>sp|VL2_HPV15|MINOR capsid protein L2|Human papillomavirus 15
Query: 2 YSSEQLLIEE 11
Y+S LL+E+
Sbjct: 431 YNSADLLLED 440
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 3 SSEQLLIEEC 12
S E L I++C
Sbjct: 434 SGESLTIDDC 443