TNR21_HUMAN Blast Output
Archaea
1|Sequence|1|10|MGTSPSSSTA

>sp|RNJ_HALSA|RIBONUCLEASE J|Halobacterium salinarum (strain ATCC 700922

Query: 2 GTSPSSSTA 10
G +PS STA
Sbjct: 215 GRTPSESTA 223


>sp|GCSPB_THEVO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 2 GTSPSSST 9
GT+P+S+T
Sbjct: 169 GTNPASAT 176


>sp|ARGC_METMJ|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GTSPSSST 9
GTSPS++T
Sbjct: 174 GTSPSATT 181


>sp|GCSPB_THEAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 2 GTSPSSST 9
GT+P+S+T
Sbjct: 169 GTNPASAT 176




2|Sequence|6|15|SSSTALASCS

***** No hits found ******


3|Sequence|11|20|LASCSRIARR

>sp|MPTA_METHJ|GTP cyclohydrolase MptA|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 CSRIARR 10
CSR+ARR
Sbjct: 98 CSRVARR 104


>sp|DHAS_METJA|ASPARTATE-SEMIALDEHYDE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ASCSRIA 8
ASC+R+A
Sbjct: 239 ASCNRVA 245


>sp|MPTA_METKA|GTP cyclohydrolase MptA|Methanopyrus kandleri (strain AV19 /

Query: 4 CSRIARR 10
CSRI+RR
Sbjct: 91 CSRISRR 97




4|Sequence|16|25|RIARRATATM

***** No hits found ******


5|Sequence|21|30|ATATMIAGSL

>sp|AMID_SACS2|AMIDASE solfataricus (strain ATCC 35092

Query: 1 ATATMIAGS 9
ATATMI GS
Sbjct: 339 ATATMILGS 347


>sp|LYSY_SULTO|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ATATMIAGS 9
ATAT++AG+
Sbjct: 152 ATATILAGA 160




6|Sequence|26|35|IAGSLLLLGF

>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 4 SLLLLGF 10
SLLLLGF
Sbjct: 228 SLLLLGF 234


>sp|MTRC_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanocaldococcus jannaschii (strain

Query: 1 IAGSLLLLGF 10
IAG++ LLGF
Sbjct: 144 IAGAMALLGF 153


>sp|PSS_METJA|CDP-DIACYLGLYCEROL--SERINE O-phosphatidyltransferase|Methanocaldococcus jannaschii (strain

Query: 2 AGSLLLLGF 10
AG+LLL+GF
Sbjct: 120 AGALLLVGF 128




7|Sequence|31|40|LLLGFLSTTT

>sp|DNLI_SACS2|DNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LLGFLSTTT 10
+LGFL TT+
Sbjct: 107 ILGFLGTTS 115


>sp|Y207_METJA|UNCHARACTERIZED protein MJ0207|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LLLGFLSTT 9
LL+GF+S T
Sbjct: 119 LLIGFISET 127


>sp|Y692_ARCFU|UNCHARACTERIZED protein AF_0692|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LLLGFLSTT 9
LL+GFLS+T
Sbjct: 7 LLIGFLSST 15


>sp|SYM_SULAC|METHIONINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LLGFLSTT 9
LLG+LS T
Sbjct: 257 LLGYLSAT 264


>sp|SYM_METS5|METHIONINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 2 LLGFLSTT 9
LLG+LS T
Sbjct: 257 LLGYLSAT 264




8|Sequence|36|45|LSTTTAQPEQ

>sp|ADH_SULAC|NAD-DEPENDENT alcohol dehydrogenase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LSTTTAQP 8
LST+TA P
Sbjct: 142 LSTSTASP 149




9|Sequence|41|50|AQPEQKASNL

***** No hits found ******


10|Sequence|46|55|KASNLIGTYR

>sp|DNLI_METTP|DNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 KASNLIGTYR 10
K +NL+G+YR
Sbjct: 435 KRANLLGSYR 444


>sp|RNP3_NATPD|RIBONUCLEASE P protein component 3|Natronomonas pharaonis (strain ATCC 35678

Query: 1 KASNLIGTYR 10
+AS L+G YR
Sbjct: 68 QASGLVGNYR 77


>sp|DNLI_METBU|DNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 KASNLIGTY 9
K +NLIG+Y
Sbjct: 454 KRANLIGSY 462


>sp|TATCT_HALVD|SEC-INDEPENDENT protein translocase protein TatCt|Haloferax volcanii (strain ATCC

Query: 2 ASNLIGTYR 10
A+N+I TYR
Sbjct: 609 AANMIITYR 617


>sp|DNLI2_METMA|DNA ligase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KASNLIGTY 9
+ +NLIG+Y
Sbjct: 452 RRANLIGSY 460


>sp|DNLI2_METAC|DNA ligase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KASNLIGTY 9
+ +NLIG+Y
Sbjct: 452 RRANLIGSY 460


>sp|DEOC_HALSA|DEOXYRIBOSE-PHOSPHATE aldolase|Halobacterium salinarum (strain ATCC 700922

Query: 1 KASNLIGTY 9
KAS +GTY
Sbjct: 176 KASGGVGTY 184


>sp|DEOC_HALS3|DEOXYRIBOSE-PHOSPHATE aldolase|Halobacterium salinarum (strain ATCC 29341

Query: 1 KASNLIGTY 9
KAS +GTY
Sbjct: 176 KASGGVGTY 184


>sp|PYRH_THEAC|URIDYLATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KASNLIGTYR 10
A NL+ TYR
Sbjct: 98 DAVNLMNTYR 107




11|Sequence|51|60|IGTYRHVDRA

>sp|YC8C_METJA|UNCHARACTERIZED protein MJ1288.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IGTYRHVDR 9
IG YR++D+
Sbjct: 31 IGKYRYIDK 39


>sp|THII_SACS2|PROBABLE tRNA sulfurtransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 IGTYRH 6
IGTY+H
Sbjct: 320 IGTYKH 325


>sp|MFNA_METST|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosphaera stadtmanae

Query: 2 GTYRHVDRA 10
G Y HVD A
Sbjct: 190 GVYLHVDAA 198


>sp|NUOCD_HALVD|NADH-QUINONE oxidoreductase subunit C/D|Haloferax volcanii (strain ATCC 29605

Query: 2 GTYRH 6
GTYRH
Sbjct: 233 GTYRH 237


>sp|TF2B_ARCFU|TRANSCRIPTION initiation factor IIB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IGTYRHVDR 9
I TY VDR
Sbjct: 204 IATYSRVDR 212


>sp|CBIA_HALSA|COBYRINATE a,c-diamide synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 IGTYRHV 7
+GTY HV
Sbjct: 421 LGTYAHV 427


>sp|PYCA_METTH|PYRUVATE carboxylase subunit A|Methanothermobacter thermautotrophicus

Query: 1 IGTYRHVDRA 10
IGTY H R
Sbjct: 482 IGTYMHSRRG 491




12|Sequence|56|65|HVDRATGQVL

>sp|IF5A_METTP|TRANSLATION initiation factor 5A|Methanothrix thermoacetophila (strain DSM

Query: 2 VDRATGQVL 10
V+R TGQVL
Sbjct: 69 VERKTGQVL 77


>sp|PGK_SULTO|PHOSPHOGLYCERATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VDRATGQVL 10
VDR TG++L
Sbjct: 32 VDRKTGKLL 40


>sp|Y1303_METJA|UNCHARACTERIZED polyferredoxin-like protein MJ1303|Methanocaldococcus jannaschii

Query: 2 VDRATGQVL 10
+DR+ G+VL
Sbjct: 399 IDRSNGEVL 407


>sp|NDK_SULAC|NUCLEOSIDE diphosphate kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 HVDRATGQVL 10
H+DRAT + L
Sbjct: 41 HMDRATAERL 50


>sp|IF5A_METJA|TRANSLATION initiation factor 5A|Methanocaldococcus jannaschii (strain ATCC

Query: 2 VDRATGQVL 10
+DR GQVL
Sbjct: 71 IDRRKGQVL 79


>sp|IF5A_THESM|TRANSLATION initiation factor 5A|Thermococcus sibiricus (strain DSM 12597

Query: 2 VDRATGQVL 10
+D+ TGQ++
Sbjct: 71 IDKKTGQII 79


>sp|SPH3_HALVD|SMC-LIKE protein Sph3|Haloferax volcanii (strain ATCC 29605

Query: 1 HVDRATGQV 9
+DR TGQ+
Sbjct: 396 ELDRRTGQI 404




13|Sequence|61|70|TGQVLTCDKC

>sp|Y012_METJA|TNPB-LIKE protein MJ0012|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GQVLTCDKC 10
GQV+ CDKC
Sbjct: 95 GQVVKCDKC 103


>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TGQVLTCDKC 10
+G+V+ CD+C
Sbjct: 78 SGKVVKCDRC 87


>sp|RS14Z_NATPD|SMALL ribosomal subunit protein uS14A|Natronomonas pharaonis (strain

Query: 1 TGQVLTCDKC 10
TGQ+ TC +C
Sbjct: 15 TGQLETCQRC 24


>sp|TIAS_THESM|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus sibiricus (strain

Query: 2 GQVLTCDKC 10
G+ L C KC
Sbjct: 368 GEYLKCKKC 376


>sp|RL44E_THEU7|LARGE ribosomal subunit protein eL42|Thermoproteus uzoniensis (strain

Query: 4 VLTCDKC 10
VLTC KC
Sbjct: 61 VLTCSKC 67


>sp|UDGA_SULTO|TYPE-4 uracil-DNA glycosylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 QVLTCDKC 10
+V++C KC
Sbjct: 10 EVISCKKC 17


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 TGQVLTCDKC 10
T VL+C +C
Sbjct: 648 TEPVLSCSRC 657


>sp|SYW_METJA|TRYPTOPHAN--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 LTCDKC 10
LTC KC
Sbjct: 331 LTCGKC 336


>sp|SYM_METS3|METHIONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 QVLTCDKC 10
Q L C+KC
Sbjct: 123 QQLYCEKC 130


>sp|Y348_METJA|UNCHARACTERIZED protein MJ0348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TGQVLTC 7
TG +LTC
Sbjct: 370 TGNLLTC 376


>sp|SYV_AERPE|VALINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 6 TCDKC 10
TC+KC
Sbjct: 424 TCEKC 428




14|Sequence|66|75|TCDKCPAGTY

>sp|UDGA_PYRAE|TYPE-4 uracil-DNA glycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 CDKCPAGTY 10
CDKCP Y
Sbjct: 13 CDKCPLHKY 21


>sp|GLCD1_VULM7|GLUCOSE 1-dehydrogenase 1|Vulcanisaeta moutnovskia (strain 768-28)

Query: 3 DKCPAGTY 10
D CP GTY
Sbjct: 104 DYCPRGTY 111


>sp|FLPA_THEVO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermoplasma volcanium (strain

Query: 3 DKCPAGT 9
D CPAGT
Sbjct: 93 DICPAGT 99


>sp|AROC_METST|CHORISMATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 TCDKCPAG 8
T D CPAG
Sbjct: 26 TIDGCPAG 33


>sp|Y004_METJA|UNCHARACTERIZED protein MJ0004|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DKCPAGT 9
DKC AGT
Sbjct: 118 DKCAAGT 124


>sp|Y83A_METJA|PROBABLE pilin MJ0832.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KCPAGTY 10
KCP GT+
Sbjct: 77 KCPPGTW 83


>sp|GLCDH_THETK|GLUCOSE 1-dehydrogenase|Thermoproteus tenax (strain ATCC 35583

Query: 3 DKCPAGTY 10
D CP G Y
Sbjct: 101 DYCPPGKY 108


>sp|TRUD_PYRIL|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum islandicum (strain DSM

Query: 3 DKCPAG 8
D CPAG
Sbjct: 19 DTCPAG 24


>sp|IF2G_METAC|TRANSLATION initiation factor 2 subunit|Methanosarcina acetivorans (strain

Query: 2 CDKCPA 7
C KCPA
Sbjct: 90 CPKCPA 95


>sp|Y1434_METJA|PUTATIVE DNA repair glycosylase MJ1434|Methanocaldococcus jannaschii (strain

Query: 2 CDKCP 6
CD CP
Sbjct: 208 CDNCP 212


>sp|ILVD_SULTO|DIHYDROXY-ACID dehydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 CDKCPAG 8
CDK P G
Sbjct: 125 CDKTPPG 131


>sp|TRUB_THEVO|PROBABLE tRNA pseudouridine synthase B|Thermoplasma volcanium (strain ATCC

Query: 4 KCPAGTY 10
KC +GTY
Sbjct: 136 KCESGTY 142


>sp|TRUB_THEAC|PROBABLE tRNA pseudouridine synthase B|Thermoplasma acidophilum (strain ATCC

Query: 4 KCPAGTY 10
KC +GTY
Sbjct: 134 KCESGTY 140


>sp|AROC_METTP|CHORISMATE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 DKCPAG 8
D CPAG
Sbjct: 29 DGCPAG 34


>sp|AROC_IGNH4|CHORISMATE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 DKCPAG 8
D CPAG
Sbjct: 28 DGCPAG 33


>sp|TRUB_METMP|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain DSM

Query: 4 KCPAGTY 10
KC +GTY
Sbjct: 157 KCQSGTY 163


>sp|TRUB_METM7|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain C7

Query: 4 KCPAGTY 10
KC +GTY
Sbjct: 157 KCQSGTY 163


>sp|TRUB_METM6|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain C6

Query: 4 KCPAGTY 10
KC +GTY
Sbjct: 157 KCQSGTY 163


>sp|TRUB_METM5|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain C5

Query: 4 KCPAGTY 10
KC +GTY
Sbjct: 157 KCQSGTY 163


>sp|TRUB_METJA|PROBABLE tRNA pseudouridine synthase B|Methanocaldococcus jannaschii (strain

Query: 4 KCPAGTY 10
KC +GTY
Sbjct: 172 KCQSGTY 178


>sp|SYV_AERPE|VALINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 TCDKCPA 7
TC+KC A
Sbjct: 424 TCEKCGA 430


>sp|AROC_METKA|CHORISMATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 DKCPAG 8
D CPAG
Sbjct: 26 DGCPAG 31


>sp|GLCD1_CALMQ|GLUCOSE 1-dehydrogenase 1|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 DKCPAGTY 10
D CP G Y
Sbjct: 101 DYCPMGHY 108


>sp|DPO4_METMJ|DNA polymerase IV|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 DKCPAGTY 10
D CP G Y
Sbjct: 71 DLCPHGVY 78


>sp|APBC_METJA|IRON-SULFUR cluster carrier protein|Methanocaldococcus jannaschii (strain

Query: 2 CDKCPA 7
CD CP+
Sbjct: 8 CDTCPS 13


>sp|GLCD2_VULM7|GLUCOSE 1-dehydrogenase 2|Vulcanisaeta moutnovskia (strain 768-28)

Query: 3 DKCPAGTY 10
D CP G Y
Sbjct: 101 DFCPVGHY 108


>sp|AROC_METAR|CHORISMATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 3 DKCPAG 8
D CPAG
Sbjct: 28 DGCPAG 33


>sp|AROC_METTH|CHORISMATE synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 DKCPAG 8
D CPAG
Sbjct: 35 DGCPAG 40


>sp|TRUB_METTH|PROBABLE tRNA pseudouridine synthase B|Methanothermobacter

Query: 5 CPAGTY 10
C AGTY
Sbjct: 164 CEAGTY 169


>sp|TRUB_AERPE|PROBABLE tRNA pseudouridine synthase B|Aeropyrum pernix (strain ATCC 700893

Query: 5 CPAGTY 10
C AGTY
Sbjct: 184 CEAGTY 189


>sp|TRUB_METKA|PROBABLE tRNA pseudouridine synthase B|Methanopyrus kandleri (strain AV19 /

Query: 5 CPAGTY 10
C AGTY
Sbjct: 172 CQAGTY 177


>sp|FUCA_METVS|L-FUCULOSE phosphate aldolase|Methanococcus vannielii (strain ATCC 35089

Query: 3 DKCPAGT 9
D CP GT
Sbjct: 121 DYCPCGT 127


>sp|TRUB_METBF|PROBABLE tRNA pseudouridine synthase B|Methanosarcina barkeri (strain Fusaro

Query: 5 CPAGTY 10
C AGTY
Sbjct: 170 CEAGTY 175


>sp|RS27A_NITMS|SMALL ribosomal subunit protein eS31|Nitrosopumilus maritimus (strain

Query: 1 TCDKCPAGTY 10
C +C GTY
Sbjct: 28 VCSRCGKGTY 37


>sp|Y267_ARCFU|UNCHARACTERIZED protein AF_0267|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TCDKCPAG 8
TC+K P G
Sbjct: 25 TCEKDPRG 32


>sp|TRUB_METMA|PROBABLE tRNA pseudouridine synthase B|Methanosarcina mazei (strain ATCC

Query: 5 CPAGTY 10
C AGTY
Sbjct: 170 CEAGTY 175


>sp|TRUB_METAC|PROBABLE tRNA pseudouridine synthase B|Methanosarcina acetivorans (strain

Query: 5 CPAGTY 10
C AGTY
Sbjct: 170 CEAGTY 175




15|Sequence|71|80|PAGTYVSEHC

>sp|TRUB_METTH|PROBABLE tRNA pseudouridine synthase B|Methanothermobacter

Query: 2 AGTYVSEHC 10
AGTYV ++C
Sbjct: 166 AGTYVRKYC 174


>sp|Y2648_METMA|UPF0280 protein MM_2648|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PAGTYVSEH 9
PAGT + EH
Sbjct: 15 PAGTPIKEH 23


>sp|CSG_HALJT|CELL surface glycoprotein|Haloarcula japonica (strain ATCC 49778

Query: 1 PAGTYVS 7
P+GTYV+
Sbjct: 429 PSGTYVT 435


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 4 TYVSEHC 10
T+++EHC
Sbjct: 203 TFITEHC 209


>sp|HIS2_METKA|PHOSPHORIBOSYL-ATP pyrophosphatase|Methanopyrus kandleri (strain AV19 /

Query: 1 PAGTYVSE 8
P G+YV+E
Sbjct: 22 PEGSYVAE 29


>sp|SYS2_METJA|TYPE-2 serine--tRNA ligase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PAGTYVSEH 9
P GT VSE+
Sbjct: 178 PPGTIVSEY 186


>sp|HIS4_METMJ|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanoculleus marisnigri (strain

Query: 1 PAGTYVS 7
PAG+Y+S
Sbjct: 143 PAGSYLS 149


>sp|AROC_SULAC|CHORISMATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PAGTYVSE 8
PAG Y+S+
Sbjct: 31 PAGLYISK 38


>sp|RS27A_NITMS|SMALL ribosomal subunit protein eS31|Nitrosopumilus maritimus (strain

Query: 3 GTYVSEH 9
GTY+SEH
Sbjct: 35 GTYMSEH 41


>sp|SYDND_METLZ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 AGTYVSEHC 10
A YV++HC
Sbjct: 249 AYQYVADHC 257


>sp|AROA_METST|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosphaera stadtmanae (strain ATCC

Query: 1 PAGTYVSEH 9
P G YV H
Sbjct: 374 PTGGYVDSH 382


>sp|ARLY_SULTO|ARGININOSUCCINATE lyase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 AGTYVSE 8
AGT++SE
Sbjct: 378 AGTFISE 384


>sp|IDI2_METBF|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanosarcina barkeri (strain Fusaro /

Query: 2 AGTYVSEH 9
+G Y SEH
Sbjct: 235 SGDYASEH 242


>sp|Y3409_METJA|UNCHARACTERIZED protein MJECS09|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GTYVSEHC 10
G Y+ HC
Sbjct: 36 GKYLENHC 43


>sp|VHCA_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit A|Archaeoglobus profundus (strain

Query: 5 YVSEHC 10
YV +HC
Sbjct: 100 YVEDHC 105




16|Sequence|76|85|VSEHCTNTSL

>sp|SYA_METBU|ALANINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 4 HCTNTSL 10
HCTNT L
Sbjct: 718 HCTNTGL 724


>sp|SYA_METMP|ALANINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 4 HCTNTS 9
HC+NTS
Sbjct: 704 HCSNTS 709


>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 4 HCTNTS 9
HC+NTS
Sbjct: 704 HCSNTS 709


>sp|SYA_METM6|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 4 HCTNTS 9
HC+NTS
Sbjct: 704 HCSNTS 709


>sp|SYA_METM5|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 4 HCTNTS 9
HC+NTS
Sbjct: 704 HCSNTS 709


>sp|SYDND_METTH|ASPARTATE--TRNA(ASP/ASN) ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 VSEHCTN 7
V+EHCT+
Sbjct: 262 VNEHCTD 268


>sp|SYA_META3|ALANINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 HCTNTS 9
HC NTS
Sbjct: 722 HCQNTS 727


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 HCTNTSL 10
HCT+T +
Sbjct: 718 HCTSTGI 724




17|Sequence|81|90|TNTSLRVCSS

>sp|COFG_METM5|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C5 /

Query: 2 NTSLRVCSS 10
N+S R+CS+
Sbjct: 159 NSSARLCST 167


>sp|Y797_METJA|UNCHARACTERIZED ABC transporter permease MJ0797|Methanocaldococcus jannaschii

Query: 2 NTSLRVC 8
N SLR+C
Sbjct: 151 NISLRIC 157




18|Sequence|86|95|RVCSSCPVGT

>sp|NIFD_METBA|NITROGENASE molybdenum-iron protein alpha chain|Methanosarcina barkeri

Query: 2 VCSSCPVG 9
+C++CPVG
Sbjct: 149 ICATCPVG 156


>sp|FRHA_METTH|COENZYME F420 hydrogenase subunit alpha|Methanothermobacter

Query: 1 RVCSSCPV 8
R+C CP+
Sbjct: 61 RICGVCPI 68


>sp|FRHA_METBF|COENZYME F420 hydrogenase subunit alpha|Methanosarcina barkeri (strain

Query: 1 RVCSSCPVG 9
RVC CP+
Sbjct: 61 RVCGICPIA 69


>sp|CCA_METMA|CCA-ADDING enzyme|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RVCSSC 6
RVCS+C
Sbjct: 131 RVCSAC 136


>sp|PYRK_THEAC|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Thermoplasma acidophilum

Query: 2 VCSSCPVG 9
+C SC VG
Sbjct: 204 ICDSCSVG 211


>sp|VHTA_METMA|F420 non-reducing hydrogenase II large|Methanosarcina mazei (strain

Query: 1 RVCSSCPV 8
R+C CP+
Sbjct: 59 RICGVCPL 66


>sp|VHOA_METMA|F420 non-reducing hydrogenase I large|Methanosarcina mazei (strain

Query: 1 RVCSSCPV 8
R+C CP+
Sbjct: 59 RICGVCPL 66


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 3 CSSCPV 8
C++CPV
Sbjct: 1726 CATCPV 1731


>sp|SYH_ARCFU|HISTIDINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RVCSSCPV 8
RVC +C V
Sbjct: 308 RVCEACSV 315


>sp|PYRK_PYRFU|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Pyrococcus furiosus

Query: 2 VCSSCPVG 9
VC SC +G
Sbjct: 205 VCGSCALG 212


>sp|Y1681_METJA|UNCHARACTERIZED protein MJ1681|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VCSSCPVG 9
VC+ CP G
Sbjct: 331 VCNICPYG 338


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 1 RVCSSC 6
RVC SC
Sbjct: 675 RVCPSC 680


>sp|FRHA_METVO|COENZYME F420 hydrogenase subunit alpha|Methanococcus voltae

Query: 1 RVCSSCPVG 9
R C CP+
Sbjct: 61 RFCGICPIA 69


>sp|RL37_HALSA|LARGE ribosomal subunit protein eL37|Halobacterium salinarum (strain

Query: 1 RVCSSCPVG 9
+VCSSC G
Sbjct: 33 KVCSSCGFG 41


>sp|RL37_HALS3|LARGE ribosomal subunit protein eL37|Halobacterium salinarum (strain

Query: 1 RVCSSCPVG 9
+VCSSC G
Sbjct: 33 KVCSSCGFG 41


>sp|PYRK_THEVO|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Thermoplasma volcanium

Query: 2 VCSSCPVG 9
+C SC +G
Sbjct: 204 ICDSCSLG 211


>sp|PYRK_THEKO|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Thermococcus kodakarensis

Query: 2 VCSSCPVG 9
VC SC +G
Sbjct: 206 VCGSCNLG 213


>sp|PYRK_PYRHO|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Pyrococcus horikoshii

Query: 2 VCSSCPVG 9
+C SC +G
Sbjct: 204 ICGSCALG 211


>sp|PYRK_PYRAB|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Pyrococcus abyssi (strain

Query: 2 VCSSCPVG 9
+C SC +G
Sbjct: 204 ICGSCALG 211


>sp|KAD_PYRAB|ADENYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 RVCSSC 6
R+CS C
Sbjct: 126 RICSKC 131


>sp|RL37_HALMA|LARGE ribosomal subunit protein eL37|Haloarcula marismortui (strain

Query: 1 RVCSSCPVG 9
+VCSSC G
Sbjct: 33 KVCSSCGFG 41


>sp|RL37_HALWD|LARGE ribosomal subunit protein eL37|Haloquadratum walsbyi (strain DSM

Query: 1 RVCSSCPVG 9
+VCSSC G
Sbjct: 33 KVCSSCGFG 41


>sp|KAD_PYRHO|ADENYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RVCSSC 6
R+CS C
Sbjct: 126 RICSKC 131


>sp|RL37_METB6|LARGE ribosomal subunit protein eL37|Methanoregula boonei (strain DSM

Query: 1 RVCSSCPVG 9
+VCSSC G
Sbjct: 32 KVCSSCGFG 40


>sp|RS27A_NITMS|SMALL ribosomal subunit protein eS31|Nitrosopumilus maritimus (strain

Query: 1 RVCSSCPVGT 10
+VCS C GT
Sbjct: 27 KVCSRCGKGT 36


>sp|QUEC_METLZ|7-CYANO-7-DEAZAGUANINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 VCSSC 6
VCSSC
Sbjct: 198 VCSSC 202


>sp|RL37_METHJ|LARGE ribosomal subunit protein eL37|Methanospirillum hungatei JF-1

Query: 1 RVCSSCPVG 9
++CSSC G
Sbjct: 32 KICSSCGFG 40




19|Sequence|91|100|CPVGTFTRHE

>sp|GLCD1_VULM7|GLUCOSE 1-dehydrogenase 1|Vulcanisaeta moutnovskia (strain 768-28)

Query: 1 CPVGTFTRH 9
CP GT+ H
Sbjct: 106 CPRGTYAEH 114


>sp|HUTU_HALSA|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 700922

Query: 2 PVGTFTRHE 10
PVG F HE
Sbjct: 97 PVGVFETHE 105


>sp|HUTU_HALS3|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 29341

Query: 2 PVGTFTRHE 10
PVG F HE
Sbjct: 97 PVGVFETHE 105


>sp|QUEC_SULAC|7-CYANO-7-DEAZAGUANINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PVGTFTRHE 10
PVG +HE
Sbjct: 402 PVGNLVKHE 410


>sp|QUEC_SACS2|7-CYANO-7-DEAZAGUANINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PVGTFTRHE 10
PVG +HE
Sbjct: 403 PVGNLVKHE 411


>sp|QUEC2_SULTO|7-CYANO-7-DEAZAGUANINE synthase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PVGTFTRHE 10
PVG +HE
Sbjct: 400 PVGNLVKHE 408


>sp|RL6_METBF|LARGE ribosomal subunit protein uL6|Methanosarcina barkeri (strain

Query: 3 VGTFTRH 9
VGTFT H
Sbjct: 67 VGTFTSH 73


>sp|HEM3_THEAC|PROBABLE porphobilinogen deaminase|Thermoplasma acidophilum (strain ATCC

Query: 2 PVGTFTRH 9
PVG +RH
Sbjct: 237 PVGILSRH 244


>sp|Y348_METJA|UNCHARACTERIZED protein MJ0348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VGTFTRHE 10
+GTF R+E
Sbjct: 343 IGTFERNE 350


>sp|PRIS_SACI7|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 3 VGTFTRHE 10
+GTFT H+
Sbjct: 1 MGTFTLHQ 8


>sp|PRIS_SACI6|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 3 VGTFTRHE 10
+GTFT H+
Sbjct: 1 MGTFTLHQ 8


>sp|PRIS_SACI4|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 3 VGTFTRHE 10
+GTFT H+
Sbjct: 1 MGTFTLHQ 8


>sp|PRIS_SACI3|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 3 VGTFTRHE 10
+GTFT H+
Sbjct: 1 MGTFTLHQ 8


>sp|PRIS_SACI2|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 3 VGTFTRHE 10
+GTFT H+
Sbjct: 1 MGTFTLHQ 8


>sp|PRIS_SACI1|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 3 VGTFTRHE 10
+GTFT H+
Sbjct: 1 MGTFTLHQ 8


>sp|PRIS_SACS2|DNA primase small subunit PriS|Saccharolobus solfataricus (strain

Query: 3 VGTFTRHE 10
+GTFT H+
Sbjct: 1 MGTFTLHQ 8


>sp|RL6_METBU|LARGE ribosomal subunit protein uL6|Methanococcoides burtonii (strain

Query: 3 VGTFTRH 9
VGT+T H
Sbjct: 66 VGTYTSH 72


>sp|Y1269_PYRHO|UPF0098 protein PH1269|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PVGTFT 7
P+GTFT
Sbjct: 95 PMGTFT 100




20|Sequence|96|105|FTRHENGIEK

>sp|RSAMH_METJA|(R)-S-ADENOSYL-L-METHIONINE hydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RHENGIEK 10
RH+NGIEK
Sbjct: 204 RHKNGIEK 211


>sp|RS13_METLZ|SMALL ribosomal subunit protein uS13|Methanocorpusculum labreanum (strain

Query: 3 RHENGIE 9
RHENG++
Sbjct: 121 RHENGLK 127


>sp|SYH_PYRAB|HISTIDINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 FTRHENGIEK 10
F ENGIEK
Sbjct: 201 FGLDENGIEK 210


>sp|HCGF_METMP|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanococcus maripaludis

Query: 3 RHENGIEK 10
R E+GIEK
Sbjct: 142 RQESGIEK 149


>sp|HCGF_METJA|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanocaldococcus jannaschii

Query: 3 RHENGIEK 10
R +NGIEK
Sbjct: 146 RQKNGIEK 153


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TRHENGIEK 10
T +ENG+EK
Sbjct: 299 TENENGLEK 307


>sp|PYCB_METJA|PYRUVATE carboxylase subunit B|Methanocaldococcus jannaschii (strain ATCC

Query: 4 HENGIE 9
HENGI+
Sbjct: 104 HENGID 109


>sp|RL2_PYRAB|LARGE ribosomal subunit protein uL2|Pyrococcus abyssi (strain GE5 /

Query: 3 RHENGIEK 10
R ENG+EK
Sbjct: 62 RFENGMEK 69


>sp|RL2_PYRFU|LARGE ribosomal subunit protein uL2|Pyrococcus furiosus (strain ATCC

Query: 3 RHENGIEK 10
+ ENGIEK
Sbjct: 62 KFENGIEK 69


>sp|PYRG_METMJ|CTP synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 FTRHENGIE 9
+TRH GIE
Sbjct: 386 YTRHVLGIE 394


>sp|PRIS_STAMF|DNA primase small subunit PriS|Staphylothermus marinus (strain ATCC

Query: 2 TRHENGIEK 10
TR+E+GI K
Sbjct: 228 TRNEHGIRK 236


>sp|NEP1_THESM|RIBOSOMAL RNA small subunit methyltransferase|Thermococcus sibiricus (strain

Query: 1 FTRHENGI 8
F HENG+
Sbjct: 149 FIMHENGV 156


>sp|CDC6_PYRHO|ORC1-TYPE DNA replication protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 RHENGIE 9
+HE GIE
Sbjct: 121 KHETGIE 127


>sp|ADHS1_ARCFU|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TRHENGIEK 10
T+ E GIEK
Sbjct: 30 TKPEKGIEK 38


>sp|ILVC_METBU|KETOL-ACID reductoisomerase (NADP(+))|Methanococcoides burtonii (strain DSM

Query: 4 HENGIEK 10
HE G+EK
Sbjct: 240 HEGGLEK 246


>sp|SYFB_PYRAB|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 RHENGIE 9
+HE GIE
Sbjct: 182 KHEKGIE 188




21|Sequence|101|110|NGIEKCHDCS

>sp|ASPG_PYRFU|L-ASPARAGINASE furiosus (strain ATCC 43587

Query: 2 GIEKCHDC 9
GI+ C DC
Sbjct: 35 GIKDCEDC 42


>sp|ARGB_METBF|ACETYLGLUTAMATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 1 NGIEKCH 7
NG+EK H
Sbjct: 284 NGVEKAH 290


>sp|RGYR_SACSH|REVERSE gyrase|Saccharolobus shibatae (strain ATCC 51178

Query: 3 IEKCHDCS 10
I+KC DC+
Sbjct: 662 IKKCLDCN 669


>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 IEKCHDCS 10
I+KC DC+
Sbjct: 662 IKKCLDCN 669


>sp|TRPG_ARCFU|ANTHRANILATE synthase component 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NGIEKCHD 8
N +E CHD
Sbjct: 170 NFVEMCHD 177


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 IEKCHDC 9
I++C DC
Sbjct: 720 IKRCRDC 726


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 IEKCHDC 9
I++C DC
Sbjct: 719 IKRCRDC 725


>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 3 IEKCHDC 9
I++C DC
Sbjct: 719 IKRCRDC 725


>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 IEKCHDC 9
I++C DC
Sbjct: 581 IKRCRDC 587


>sp|RGYRA_NANEQ|REVERSE gyrase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 IEKCHDC 9
I+KC DC
Sbjct: 117 IKKCLDC 123


>sp|RL37A_PICTO|LARGE ribosomal subunit protein eL43|Picrophilus torridus (strain ATCC

Query: 1 NGIEKCHDCS 10
NGI +C CS
Sbjct: 52 NGIWECRHCS 61


>sp|DNAJ_HALWD|CHAPERONE protein DnaJ|Haloquadratum walsbyi (strain DSM 16790

Query: 4 EKCHDCS 10
EKC DC+
Sbjct: 159 EKCPDCN 165


>sp|ILVE_METTH|PUTATIVE branched-chain-amino-acid aminotransferase|Methanothermobacter

Query: 1 NGIEKCH 7
NG+E+C+
Sbjct: 90 NGLEECY 96


>sp|TRPC_METTH|INDOLE-3-GLYCEROL phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 2 GIEKCHDCS 10
GI+KC + S
Sbjct: 144 GIQKCRELS 152


>sp|ACDA2_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 1 NGIEKCHDC 9
N + KC DC
Sbjct: 412 NWVAKCADC 420


>sp|Y1650_METJA|UNCHARACTERIZED protein MJ1650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IEKCHDC 9
IE CH C
Sbjct: 55 IEVCHMC 61


>sp|PRIL_ARCFU|DNA primase large subunit PriL|Archaeoglobus fulgidus (strain ATCC

Query: 4 EKCHDC 9
E C+DC
Sbjct: 71 ENCYDC 76


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 2 GIEKCHDC 9
G KC DC
Sbjct: 638 GRRKCPDC 645


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 IEKCHDC 9
++KC DC
Sbjct: 414 VDKCADC 420


>sp|TRM1_HALLT|TRNA (guanine(26)-N(2))-dimethyltransferase|Halorubrum lacusprofundi

Query: 3 IEKCHDC 9
I+ C DC
Sbjct: 234 IDNCEDC 240


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 3 IEKCHDC 9
++KC DC
Sbjct: 414 VDKCADC 420


>sp|Y1684_METTH|UNCHARACTERIZED protein MTH_1684|Methanothermobacter thermautotrophicus (strain

Query: 4 EKCHDCS 10
E+C DC+
Sbjct: 343 ERCTDCA 349


>sp|ACDA1_METBF|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina barkeri

Query: 1 NGIEKCHDC 9
N + KC DC
Sbjct: 412 NWVMKCADC 420




22|Sequence|106|115|CHDCSQPCPW

>sp|Y090_METJA|UNCHARACTERIZED protease MJ0090|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CHDCSQPC 8
C DC QPC
Sbjct: 192 CGDCLQPC 199


>sp|IF2B_METTH|TRANSLATION initiation factor 2 subunit|Methanothermobacter thermautotrophicus

Query: 1 CHDCSQP 7
CH+C++P
Sbjct: 102 CHECNRP 108


>sp|IF2B_METST|TRANSLATION initiation factor 2 subunit|Methanosphaera stadtmanae (strain ATCC

Query: 1 CHDCSQP 7
CH+C++P
Sbjct: 109 CHECNRP 115


>sp|HDRA_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina mazei (strain

Query: 1 CHDCSQPCP 9
C DCS CP
Sbjct: 612 CGDCSAACP 620


>sp|HDRA2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 1 CHDCSQPCP 9
C DCS CP
Sbjct: 612 CGDCSAACP 620


>sp|Y1185_METJA|UNCHARACTERIZED protein MJ1185|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DCSQPCP 9
+C +PCP
Sbjct: 301 NCGEPCP 307


>sp|IF2B_METS3|TRANSLATION initiation factor 2 subunit|Methanobrevibacter smithii (strain ATCC

Query: 1 CHDCSQP 7
CH+C++P
Sbjct: 102 CHECNRP 108


>sp|IORA_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus horikoshii (strain ATCC

Query: 1 CHDCSQPCPW 10
C C+Q CP+
Sbjct: 628 CGGCAQVCPF 637


>sp|IORA_PYRAB|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus abyssi (strain GE5 /

Query: 1 CHDCSQPCPW 10
C C+Q CP+
Sbjct: 628 CGGCAQVCPF 637


>sp|SYE_SULTO|GLUTAMATE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 DCSQPCP 9
D S+PCP
Sbjct: 207 DASKPCP 213


>sp|GAPOR_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE:FERREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 CSQPCP 9
C +PCP
Sbjct: 333 CGEPCP 338


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 CHDCSQPCP 9
C C Q CP
Sbjct: 447 CMKCEQACP 455


>sp|IORA_THEKO|INDOLEPYRUVATE oxidoreductase subunit IorA|Thermococcus kodakarensis (strain ATCC

Query: 1 CHDCSQPCPW 10
C C+Q CP+
Sbjct: 628 CGGCAQVCPF 637


>sp|RNP2_METVS|RIBONUCLEASE P protein component 2|Methanococcus vannielii (strain ATCC 35089

Query: 2 HDCSQPCPW 10
H CS+ PW
Sbjct: 46 HGCSKVNPW 54


>sp|RPO3_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo3|Archaeoglobus fulgidus (strain ATCC

Query: 1 CHDCSQPCP 9
C DC + CP
Sbjct: 176 CGDCIEACP 184


>sp|VHUB_METVO|POLYFERREDOXIN protein VhuB|Methanococcus voltae

Query: 1 CHDCSQPCPW 10
C C+Q CPW
Sbjct: 164 CSVCAQTCPW 173


Query: 1 CHDCSQPCP 9
CH C Q CP
Sbjct: 232 CHLCEQNCP 240


>sp|ACDA1_METKA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanopyrus kandleri

Query: 1 CHDCSQPCP 9
C DC + CP
Sbjct: 393 CGDCERVCP 401


>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 1 CHDCSQPCP 9
C C Q CP
Sbjct: 444 CQRCEQTCP 452


>sp|FDHB_METTF|F420-DEPENDENT formate dehydrogenase subunit beta|Methanothermobacter

Query: 1 CHDCSQPCP 9
C+ C + CP
Sbjct: 298 CYSCREACP 306


>sp|SYE_METST|GLUTAMATE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 DCSQPCP 9
D QPCP
Sbjct: 204 DNCQPCP 210


>sp|AGLUS_METJA|ARCHAEAL glutamate synthase [NADPH]|Methanocaldococcus jannaschii (strain

Query: 1 CHDCSQPCP 9
CH C CP
Sbjct: 51 CHRCVVMCP 59


>sp|HDRC_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit

Query: 1 CHDCSQPCP 9
C+ C + CP
Sbjct: 82 CYSCQERCP 90


>sp|HDRC_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit

Query: 1 CHDCSQPCP 9
C+ C + CP
Sbjct: 82 CYSCQERCP 90


>sp|CAPPA_THEPD|PHOSPHOENOLPYRUVATE carboxylase|Thermofilum pendens (strain DSM 2475

Query: 1 CHDCSQPC 8
C + QPC
Sbjct: 140 CEEVGQPC 147


>sp|HDRC1_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 1 CHDCSQPCP 9
C++C + CP
Sbjct: 82 CYECYERCP 90


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 CHDCSQPCP 9
C C Q CP
Sbjct: 446 CGRCEQVCP 454


Query: 1 CHDCSQPCP 9
C +C+ CP
Sbjct: 408 CGNCTIACP 416


>sp|Y1691_METAC|UPF0210 protein MA_1691|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 DCSQPCP 9
DCS P P
Sbjct: 44 DCSHPDP 50


>sp|HMED_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 1 CHDCSQPCPW 10
C CS CP+
Sbjct: 163 CRRCSLFCPY 172


>sp|PUS10_CENSY|TRNA pseudouridine synthase Pus10|Cenarchaeum symbiosum (strain A)

Query: 1 CHDCSQPCP 9
CH C CP
Sbjct: 44 CHICKGLCP 52


>sp|HDRC1_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit C1|Methanococcus

Query: 1 CHDCSQPCP 9
C++C + CP
Sbjct: 80 CYECYEKCP 88


>sp|SYM_METKA|METHIONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 CHDCSQPCP 9
C +C +P P
Sbjct: 130 CPECERPLP 138


>sp|HDLC_ARCPA|HETERODISULFIDE reductase subunit C-like protein|Archaeoglobus profundus (strain

Query: 1 CHDCSQPCP 9
C+ C++ CP
Sbjct: 92 CNRCTEICP 100


>sp|HDRA1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina acetivorans

Query: 1 CHDCSQPCP 9
C CS+ CP
Sbjct: 251 CGRCSRVCP 259


>sp|HMED_ARCPA|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 1 CHDCSQPCPW 10
C CS CP+
Sbjct: 167 CRRCSLFCPY 176


>sp|HDRA1_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 1 CHDCSQPCPW 10
C C+Q CP+
Sbjct: 596 CGACAQVCPF 605


>sp|IORA_METTH|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter thermautotrophicus

Query: 1 CHDCSQPCP 9
C C Q CP
Sbjct: 600 CSVCLQICP 608


>sp|ACDG2_METMA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina mazei

Query: 1 CHDCSQP 7
C +C QP
Sbjct: 18 CGECGQP 24


>sp|ACDG1_METMA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina mazei

Query: 1 CHDCSQP 7
C +C QP
Sbjct: 18 CGECGQP 24


>sp|VHUB_METJA|POLYFERREDOXIN protein VhuB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CHDCSQPCPW 10
C C+Q CPW
Sbjct: 174 CSICAQTCPW 183


>sp|RAD50_HALVD|DNA double-strand break repair Rad50|Haloferax volcanii (strain ATCC

Query: 1 CHDCSQP 7
C +C QP
Sbjct: 454 CPECGQP 460


>sp|RAD50_HALSA|DNA double-strand break repair Rad50|Halobacterium salinarum (strain

Query: 1 CHDCSQP 7
C +C QP
Sbjct: 454 CPECGQP 460


>sp|IF2G_HALSA|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 1 CHDCSQP 7
C DC +P
Sbjct: 59 CPDCDEP 65


>sp|IF2G_HALS3|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 1 CHDCSQP 7
C DC +P
Sbjct: 59 CPDCDEP 65


>sp|FPOF_METMA|F(420)H(2) dehydrogenase subunit F|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 CHDCSQPCP 9
C CS+ CP
Sbjct: 58 CLTCSRICP 66


>sp|HDRC2_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit C2|Methanococcus

Query: 1 CHDCSQPCP 9
C+ C + CP
Sbjct: 80 CYTCYERCP 88


>sp|HDRC1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit C|Methanosarcina acetivorans

Query: 1 CHDCSQPCP 9
C+ C+ CP
Sbjct: 87 CYSCNLRCP 95


>sp|HDRA_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 1 CHDCSQPCPW 10
C C++ CP+
Sbjct: 586 CQVCAKMCPY 595


>sp|RPO3_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus shibatae (strain ATCC

Query: 1 CHDCSQPC 8
C DC++ C
Sbjct: 82 CIDCTENC 89


>sp|TFRB_METTM|FUMARATE reductase (CoM/CoB) subunit B|Methanothermobacter marburgensis

Query: 1 CHDCSQPCP 9
C C++ CP
Sbjct: 192 CGKCAEVCP 200


>sp|ACDA2_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 CHDCSQPCP 9
C +C+ CP
Sbjct: 417 CGECALACP 425


>sp|RNFC_METAC|ION-TRANSLOCATING oxidoreductase complex subunit C|Methanosarcina acetivorans (strain

Query: 1 CHDCSQPCP 9
C +C+ CP
Sbjct: 411 CGECAVVCP 419


>sp|GLNB4_METBA|NITROGEN fixation nifHD2 region GlnB-like|Methanosarcina barkeri

Query: 1 CHDCSQPCP 9
CH+ + P P
Sbjct: 43 CHEFNPPLP 51


>sp|MVHB_METFE|POLYFERREDOXIN protein MvhB|Methanothermus fervidus

Query: 1 CHDCSQPCPW 10
C C+Q CPW
Sbjct: 180 CGICAQTCPW 189


>sp|MVHB_METTM|POLYFERREDOXIN protein MvhB|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 CHDCSQPCPW 10
C C+Q CPW
Sbjct: 180 CGVCAQTCPW 189


>sp|MVHB_METTH|POLYFERREDOXIN protein MvhB|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 CHDCSQPCPW 10
C C+Q CPW
Sbjct: 180 CGVCAQTCPW 189


>sp|DMRX_METMA|DIHYDROMETHANOPTERIN reductase (acceptor)|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 CHDCSQPCPW 10
C C + CP+
Sbjct: 188 CGICKELCPY 197


>sp|SYV_HALMA|VALINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 CHDCSQP 7
C DC +P
Sbjct: 448 CDDCGEP 454


>sp|HDRC2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 1 CHDCSQPCP 9
C+ C + CP
Sbjct: 65 CYTCQERCP 73


>sp|HDRC_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit C|Methanosarcina mazei (strain

Query: 1 CHDCSQPCP 9
C+ C + CP
Sbjct: 65 CYTCQERCP 73


>sp|ASSTI_METJA|L-ASPARTATE semialdehyde sulfurtransferase iron-sulfur

Query: 1 CHDCSQPCPW 10
C +C + CP+
Sbjct: 115 CKNCLKACPF 124




23|Sequence|111|120|QPCPWPMIEK

>sp|IF2P_CALMQ|PROBABLE translation initiation factor IF-2|Caldivirga maquilingensis

Query: 4 PWPMIEK 10
PWP+IEK
Sbjct: 50 PWPIIEK 56


>sp|IF2P_PYRCJ|PROBABLE translation initiation factor IF-2|Pyrobaculum calidifontis

Query: 4 PWPMIEK 10
PWP +EK
Sbjct: 50 PWPAVEK 56


>sp|GCSPB_SACS2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 4 PWPMIEK 10
P+PM+EK
Sbjct: 304 PYPMVEK 310


>sp|GCSPB_SACI7|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 4 PWPMIEK 10
P+PM+EK
Sbjct: 305 PYPMVEK 311


>sp|GCSPB_SACI6|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 4 PWPMIEK 10
P+PM+EK
Sbjct: 305 PYPMVEK 311


>sp|GCSPB_SACI4|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 4 PWPMIEK 10
P+PM+EK
Sbjct: 305 PYPMVEK 311


>sp|GCSPB_SACI3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 4 PWPMIEK 10
P+PM+EK
Sbjct: 305 PYPMVEK 311


>sp|GCSPB_SACI2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 4 PWPMIEK 10
P+PM+EK
Sbjct: 305 PYPMVEK 311


>sp|GCSPB_SACI1|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 4 PWPMIEK 10
P+PM+EK
Sbjct: 305 PYPMVEK 311


>sp|LON_METBF|LON protease|Methanosarcina barkeri (strain Fusaro /

Query: 4 PWPMIEK 10
PWP++++
Sbjct: 486 PWPLLDR 492


>sp|SELD_METMP|SELENIDE, water dikinase|Methanococcus maripaludis (strain DSM 14266

Query: 4 PWPMI 8
PWP+I
Sbjct: 132 PWPLI 136


>sp|SELD_METJA|SELENIDE, water dikinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PWPMI 8
PWP+I
Sbjct: 146 PWPLI 150


>sp|ACD2_ARCFU|ACETATE--COA ligase [ADP-forming] II|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 WPMIE 9
WPM+E
Sbjct: 568 WPMVE 572


>sp|GCSPB_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 4 PWPMIEK 10
P+P++EK
Sbjct: 301 PYPLVEK 307


>sp|TRPA_HALVD|TRYPTOPHAN synthase alpha chain|Haloferax volcanii (strain ATCC 29605

Query: 1 QPCPWPMIEK 10
+P P P +EK
Sbjct: 103 EPGPRPFVEK 112


>sp|PUS10_METV3|TRNA pseudouridine synthase Pus10|Methanococcus voltae (strain ATCC

Query: 1 QPCPW 5
Q CPW
Sbjct: 159 QKCPW 163


>sp|CBIHC_ARCFU|COBALAMIN biosynthesis protein CbiHC|Archaeoglobus fulgidus (strain ATCC

Query: 4 PWPMIEK 10
PW ++EK
Sbjct: 145 PWSVVEK 151


>sp|IF2G_METJA|TRANSLATION initiation factor 2 subunit|Methanocaldococcus jannaschii (strain

Query: 1 QPCPWPMIEK 10
+PCP P ++
Sbjct: 119 EPCPQPQTKE 128


>sp|IF2G_METTH|TRANSLATION initiation factor 2 subunit|Methanothermobacter thermautotrophicus

Query: 1 QPCPWPMIEK 10
+PCP P ++
Sbjct: 117 EPCPQPQTKE 126


>sp|PORB_METBF|PYRUVATE synthase subunit PorB|Methanosarcina barkeri (strain Fusaro /

Query: 1 QPCPWPMIE 9
+ C WPM E
Sbjct: 230 ETCLWPMYE 238


>sp|COFC_HALUD|2-PHOSPHO-L-LACTATE guanylyltransferase|Halorhabdus utahensis (strain DSM 12940

Query: 3 CPWPMI 8
C WP++
Sbjct: 57 CEWPVV 62


>sp|AROD_METHJ|3-DEHYDROQUINATE dehydratase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 CPWPMI 8
CP+P+I
Sbjct: 168 CPYPII 173


>sp|IF2G_METKA|TRANSLATION initiation factor 2 subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 QPCPWP 6
+PCP P
Sbjct: 118 EPCPQP 123


>sp|IF2G_AERPE|TRANSLATION initiation factor 2 subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 QPCPWPMIEK 10
+PCP P ++
Sbjct: 122 EPCPQPQTKE 131


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 CPWPMIE 9
C WP+++
Sbjct: 839 CDWPVVD 845


>sp|CCA_METKA|CCA-ADDING enzyme|Methanopyrus kandleri (strain AV19 /

Query: 5 WPMIEK 10
WP +EK
Sbjct: 321 WPQLEK 326




24|Sequence|116|125|PMIEKLPCAA

>sp|PYRB_METLZ|ASPARTATE carbamoyltransferase catalytic subunit|Methanocorpusculum labreanum

Query: 1 PMIEKLPCA 9
P ++ LPCA
Sbjct: 273 PAVDSLPCA 281


>sp|GSA_METTH|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 MIEKLPCA 9
+IE++PCA
Sbjct: 95 IIERVPCA 102


>sp|GSA_META3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 MIEKLPCA 9
+I+++PCA
Sbjct: 105 IIKRMPCA 112


>sp|GLMM_METVS|PHOSPHOGLUCOSAMINE mutase|Methanococcus vannielii (strain ATCC 35089

Query: 4 EKLPC 8
EKLPC
Sbjct: 363 EKLPC 367


>sp|GLMM_META3|PHOSPHOGLUCOSAMINE mutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 EKLPC 8
EKLPC
Sbjct: 367 EKLPC 371


>sp|ACSA_METSH|ACETYL-COENZYME A synthetase|Methanothrix soehngenii (Methanosaeta concilii)

Query: 1 PMIEKLPCA 9
PMI +LP A
Sbjct: 166 PMIPQLPIA 174




25|Sequence|121|130|LPCAALTDRE

>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 2 PCAALTDRE 10
PC LTD+E
Sbjct: 252 PCQTLTDQE 260


>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 2 PCAALTDRE 10
PC LTD E
Sbjct: 248 PCLTLTDEE 256


>sp|OTCC_HALSA|ORNITHINE carbamoyltransferase, catabolic|Halobacterium salinarum (strain

Query: 2 PCAALTD 8
PC ALTD
Sbjct: 128 PCQALTD 134


>sp|KAE1_NANEQ|TRNA N6-adenosine threonylcarbamoyltransferase|Nanoarchaeum equitans

Query: 1 LPCAALTD 8
LPC LTD
Sbjct: 276 LPCQYLTD 283


>sp|OTC_METKA|ORNITHINE carbamoyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 PCAALTD 8
PC ALTD
Sbjct: 138 PCQALTD 144


>sp|MBHLA_PYRFU|MEMBRANE-BOUND hydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PCAALTDR 9
PC + TDR
Sbjct: 373 PCLSCTDR 380


>sp|MTD_METPE|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosphaerula

Query: 1 LPCAALTD 8
+PC +TD
Sbjct: 87 IPCVVITD 94


>sp|MTD_METHJ|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanospirillum

Query: 1 LPCAALTD 8
+PC +TD
Sbjct: 87 IPCVVITD 94


>sp|HEM1_METLZ|GLUTAMYL-TRNA reductase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 PCAALTD 8
PC AL+D
Sbjct: 228 PCIALSD 234




26|Sequence|126|135|LTDRECTCPP

>sp|SYE_PYRFU|GLUTAMATE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 6 CTCPP 10
CTCPP
Sbjct: 197 CTCPP 201


>sp|SYE_THEON|GLUTAMATE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 6 CTCPP 10
CTCPP
Sbjct: 196 CTCPP 200


>sp|SYE_PYRHO|GLUTAMATE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 6 CTCPP 10
CTCPP
Sbjct: 195 CTCPP 199


>sp|SYE_THEKO|GLUTAMATE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 6 CTCPP 10
CTCPP
Sbjct: 197 CTCPP 201


>sp|SYE_IGNH4|GLUTAMATE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 6 CTCPP 10
CTCPP
Sbjct: 194 CTCPP 198


>sp|PMDHL_METMA|PHOSPHOMEVALONATE dehydratase large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 ECTCPP 10
ECTC P
Sbjct: 113 ECTCTP 118


>sp|ADEC_METTH|ADENINE deaminase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 TDRECTCP 9
TD EC P
Sbjct: 192 TDHECVSP 199


>sp|CDC6_METST|ORC1-TYPE DNA replication protein|Methanosphaera stadtmanae (strain ATCC

Query: 1 LTDRECTCPP 10
L DRE PP
Sbjct: 196 LRDREIVFPP 205


>sp|CDC61_METTH|ORC1-TYPE DNA replication protein 1|Methanothermobacter thermautotrophicus

Query: 1 LTDRECTCPP 10
L DRE PP
Sbjct: 195 LRDREIVFPP 204


>sp|PYCA_METTH|PYRUVATE carboxylase subunit A|Methanothermobacter thermautotrophicus

Query: 1 LTDRECT 7
L DREC+
Sbjct: 224 LADRECS 230


>sp|RTCB_METMP|TRNA-SPLICING ligase RtcB|Methanococcus maripaludis (strain DSM 14266

Query: 1 LTDRECTCPP 10
L DR+ C P
Sbjct: 263 LPDRQLACAP 272


>sp|RTCB_METJA|TRNA-SPLICING ligase RtcB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LTDRECTCPP 10
L DR+ C P
Sbjct: 751 LPDRQLACAP 760


>sp|RTCB_ARCFU|TRNA-SPLICING ligase RtcB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LTDRECTCPP 10
L DR+ C P
Sbjct: 265 LPDRQLACAP 274


>sp|PYRC_AERPE|DIHYDROOROTASE pernix (strain ATCC 700893

Query: 4 RECTCPP 10
REC C P
Sbjct: 212 RECGCKP 218


>sp|Y1109_ARCFU|UNCHARACTERIZED protein AF_1109|Archaeoglobus fulgidus (strain ATCC 49558

Query: 6 CTCP 9
CTCP
Sbjct: 65 CTCP 68


>sp|SYE_THEAC|GLUTAMATE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 6 CTCP 9
CTCP
Sbjct: 190 CTCP 193


>sp|ILVD_METM7|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C7 /

Query: 5 ECTCP 9
EC CP
Sbjct: 182 ECACP 186


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 1 LTDRECTC 8
+T+R C C
Sbjct: 339 VTERTCAC 346


>sp|ILVD_METM5|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C5 /

Query: 5 ECTCP 9
EC CP
Sbjct: 182 ECACP 186


>sp|MTAP_CENSY|S-METHYL-5'-THIOADENOSINE phosphorylase|Cenarchaeum symbiosum (strain A)

Query: 3 DRECTC 8
DR+CTC
Sbjct: 226 DRKCTC 231


>sp|GATB_META3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus aeolicus (strain ATCC

Query: 6 CTCP 9
CTCP
Sbjct: 25 CTCP 28


>sp|PORB_PYRFU|PYRUVATE synthase subunit PorB|Pyrococcus furiosus (strain ATCC 43587

Query: 6 CTCP 9
CTCP
Sbjct: 220 CTCP 223


>sp|SYE_KORCO|GLUTAMATE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 6 CTCP 9
CTCP
Sbjct: 198 CTCP 201


>sp|PORB_PYRHO|PYRUVATE synthase subunit PorB|Pyrococcus horikoshii (strain ATCC 700860

Query: 6 CTCP 9
CTCP
Sbjct: 220 CTCP 223


>sp|PYRK_METBU|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanococcoides burtonii

Query: 3 DRECTCPP 10
DR C C P
Sbjct: 174 DRICVCGP 181


>sp|ADEC_METMJ|ADENINE deaminase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 TDRECTCPP 10
+D ECT P
Sbjct: 177 SDHECTALP 185


>sp|PORB_PYRAB|PYRUVATE synthase subunit PorB|Pyrococcus abyssi (strain GE5 /

Query: 6 CTCP 9
CTCP
Sbjct: 220 CTCP 223


>sp|SYFB_METPE|PHENYLALANINE--TRNA ligase beta subunit|Methanosphaerula palustris (strain ATCC

Query: 3 DRECTCPP 10
DR C+ PP
Sbjct: 200 DRVCSFPP 207




27|Sequence|131|140|CTCPPGMFQS

>sp|SYE_PYRFU|GLUTAMATE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 CTCPPGMFQ 9
CTCPP F+
Sbjct: 197 CTCPPDEFR 205


>sp|SYE_THEON|GLUTAMATE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 CTCPPGMFQ 9
CTCPP F+
Sbjct: 196 CTCPPEKFR 204


>sp|SYE_THEKO|GLUTAMATE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 CTCPPGMFQ 9
CTCPP F+
Sbjct: 197 CTCPPEKFR 205


>sp|SYE_PYRHO|GLUTAMATE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 CTCPPGMFQ 9
CTCPP F+
Sbjct: 195 CTCPPEKFR 203


>sp|SYE_IGNH4|GLUTAMATE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 CTCPP 5
CTCPP
Sbjct: 194 CTCPP 198


>sp|SYE_HALMA|GLUTAMATE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 CTCPPGMF 8
C+CP G F
Sbjct: 204 CSCPQGEF 211


>sp|PORB_PYRFU|PYRUVATE synthase subunit PorB|Pyrococcus furiosus (strain ATCC 43587

Query: 1 CTCPPG 6
CTCP G
Sbjct: 220 CTCPTG 225


>sp|RPO1N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanococcus vannielii (strain ATCC

Query: 1 CTCPP 5
C CPP
Sbjct: 458 CVCPP 462


>sp|RPO1N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 1 CTCPP 5
C CPP
Sbjct: 443 CVCPP 447


>sp|RPO1N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 1 CTCPP 5
C CPP
Sbjct: 443 CVCPP 447


>sp|KPTA_METKA|PROBABLE RNA 2'-phosphotransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 TCPPGMFQ 9
TCP G F+
Sbjct: 98 TCPKGRFE 105


>sp|PORB_PYRHO|PYRUVATE synthase subunit PorB|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 CTCPPG 6
CTCP G
Sbjct: 220 CTCPTG 225


>sp|PORB_PYRAB|PYRUVATE synthase subunit PorB|Pyrococcus abyssi (strain GE5 /

Query: 1 CTCPPG 6
CTCP G
Sbjct: 220 CTCPTG 225


>sp|GLCDH_THETK|GLUCOSE 1-dehydrogenase|Thermoproteus tenax (strain ATCC 35583

Query: 3 CPPGMF 8
CPPG +
Sbjct: 103 CPPGKY 108


>sp|GLMM_METST|PROBABLE phosphoglucosamine mutase|Methanosphaera stadtmanae (strain ATCC

Query: 1 CTCPPGMF 8
C CP G+
Sbjct: 331 CMCPDGLL 338


>sp|GLMM_METTH|PROBABLE phosphoglucosamine mutase|Methanothermobacter thermautotrophicus

Query: 1 CTCPPGMFQS 10
C CP G+ +
Sbjct: 327 CMCPDGILSA 336


>sp|BRIX_METTH|PROBABLE Brix domain-containing ribosomal biogenesis|Methanothermobacter

Query: 2 TCPPG 6
+CPPG
Sbjct: 95 SCPPG 99


>sp|GATE_PYRNV|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum neutrophilum (strain DSM

Query: 1 CTCPP 5
C CPP
Sbjct: 26 CHCPP 30


>sp|GATE_PYRIL|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum islandicum (strain DSM

Query: 1 CTCPP 5
C CPP
Sbjct: 26 CHCPP 30


>sp|GATE_PYRCJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum calidifontis (strain DSM

Query: 1 CTCPP 5
C CPP
Sbjct: 26 CHCPP 30


>sp|GATE_PYRAR|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum arsenaticum (strain DSM

Query: 1 CTCPP 5
C CPP
Sbjct: 26 CHCPP 30


>sp|GATE_PYRAE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum aerophilum (strain ATCC

Query: 1 CTCPP 5
C CPP
Sbjct: 26 CHCPP 30


>sp|GLMM_METBU|PROBABLE phosphoglucosamine mutase|Methanococcoides burtonii (strain DSM

Query: 3 CPPGMFQS 10
CP G+F S
Sbjct: 321 CPDGIFAS 328


>sp|PYRC_SULTO|DIHYDROOROTASE tokodaii (strain DSM 16993

Query: 3 CPPGM 7
CPPG+
Sbjct: 270 CPPGI 274


>sp|PYRC_SULAC|DIHYDROOROTASE acidocaldarius (strain ATCC 33909

Query: 3 CPPGM 7
CPPG+
Sbjct: 272 CPPGI 276


>sp|PYRC_SACS2|DIHYDROOROTASE solfataricus (strain ATCC 35092

Query: 3 CPPGM 7
CPPG+
Sbjct: 275 CPPGI 279


>sp|GLMM_METS3|PROBABLE phosphoglucosamine mutase|Methanobrevibacter smithii (strain ATCC

Query: 1 CTCPPGMF 8
C CP G+
Sbjct: 324 CMCPDGIL 331


>sp|RPO3_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus shibatae (strain ATCC

Query: 3 CPPGMFQ 9
CP G+F+
Sbjct: 183 CPEGVFE 189


>sp|RPO3_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain M.16.4

Query: 3 CPPGMFQ 9
CP G+F+
Sbjct: 183 CPEGVFE 189


>sp|RPO3_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 3 CPPGMFQ 9
CP G+F+
Sbjct: 183 CPEGVFE 189


>sp|RPO3_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 3 CPPGMFQ 9
CP G+F+
Sbjct: 183 CPEGVFE 189


>sp|RPO3_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 3 CPPGMFQ 9
CP G+F+
Sbjct: 183 CPEGVFE 189


>sp|RPO3_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 3 CPPGMFQ 9
CP G+F+
Sbjct: 183 CPEGVFE 189


>sp|RPO3_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 3 CPPGMFQ 9
CP G+F+
Sbjct: 183 CPEGVFE 189


>sp|RPO3_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus solfataricus (strain ATCC

Query: 3 CPPGMFQ 9
CP G+F+
Sbjct: 183 CPEGVFE 189




28|Sequence|136|145|GMFQSNATCA

>sp|TRM1_METB6|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanoregula boonei (strain

Query: 1 GMFQSNATC 9
GMF ATC
Sbjct: 248 GMFPPAATC 256




29|Sequence|141|150|NATCAPHTVC

>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 3 TCAPHTVC 10
T APHT C
Sbjct: 953 TLAPHTSC 960


>sp|AHBD_METBF|ADOMET-DEPENDENT heme synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 ATCAPH 7
ATCAPH
Sbjct: 221 ATCAPH 226


>sp|PANB_NATPD|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 CAPHTV 9
C PHTV
Sbjct: 113 CGPHTV 118


>sp|ACDB2_METTE|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 5 APHTVC 10
APHT C
Sbjct: 273 APHTSC 278


>sp|ACDB2_METAC|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 5 APHTVC 10
APHT C
Sbjct: 273 APHTSC 278


>sp|HEM1_METKA|GLUTAMYL-TRNA reductase|Methanopyrus kandleri (strain AV19 /

Query: 1 NATCAPHTV 9
+AT APH V
Sbjct: 233 SATAAPHPV 241


>sp|HBCL2_METS5|4-HYDROXYBUTYRATE--COA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 3 TCAPHTVC 10
T PH++C
Sbjct: 337 TYGPHSIC 344


>sp|SPEH_SACS2|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Saccharolobus solfataricus (strain ATCC

Query: 3 TCAPHT 8
+C PHT
Sbjct: 90 SCGPHT 95


>sp|SPEH_SACI7|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Saccharolobus islandicus (strain

Query: 3 TCAPHT 8
+C PHT
Sbjct: 88 SCGPHT 93


>sp|SPEH_SACI6|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Saccharolobus islandicus (strain M.16.4 /

Query: 3 TCAPHT 8
+C PHT
Sbjct: 88 SCGPHT 93


>sp|SPEH_SACI4|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Saccharolobus islandicus (strain M.14.25

Query: 3 TCAPHT 8
+C PHT
Sbjct: 88 SCGPHT 93


>sp|SPEH_SACI3|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Saccharolobus islandicus (strain M.16.27)

Query: 3 TCAPHT 8
+C PHT
Sbjct: 88 SCGPHT 93


>sp|SPEH_SACI2|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Saccharolobus islandicus (strain L.S.2.15

Query: 3 TCAPHT 8
+C PHT
Sbjct: 88 SCGPHT 93


>sp|SPEH_SACI1|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Saccharolobus islandicus (strain

Query: 3 TCAPHT 8
+C PHT
Sbjct: 88 SCGPHT 93


>sp|COFG_METJA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NATCAPHTVC 10
N + PHT C
Sbjct: 126 NTSLLPHTNC 135


>sp|Y694_ARCFU|UNCHARACTERIZED protein AF_0694|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NATCAPHTVC 10
NA AP VC
Sbjct: 36 NAVAAPLEVC 45


>sp|MVHA_METFE|F420-NON-REDUCING hydrogenase subunit A|Methanothermus fervidus

Query: 3 TCAPHTV 9
+CA HTV
Sbjct: 444 SCATHTV 450


>sp|Y1051_ARCFU|UNCHARACTERIZED protein AF_1051|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 CAPHTVC 10
C P+ VC
Sbjct: 148 CTPNAVC 154


>sp|FLAB2_ARCFU|PROBABLE flagellin 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NATCAPHTVC 10
N +C P T C
Sbjct: 126 NDSCTPGTDC 135


>sp|COFG_METMP|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 NATCAPHTVC 10
N PHT C
Sbjct: 104 NTNLIPHTNC 113


>sp|COFG_METVS|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 NATCAPHTVC 10
N PHT C
Sbjct: 126 NTNILPHTNC 135


>sp|COFG_METM6|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C6 /

Query: 1 NATCAPHTVC 10
N PHT C
Sbjct: 126 NTNLLPHTNC 135


>sp|COFG_METM5|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C5 /

Query: 1 NATCAPHTVC 10
N PHT C
Sbjct: 126 NTNLLPHTNC 135


>sp|TIAS_HALWD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Haloquadratum walsbyi (strain

Query: 3 TCAPHTVC 10
TC PH+V
Sbjct: 97 TCTPHSVA 104


>sp|HEM1_METBF|GLUTAMYL-TRNA reductase|Methanosarcina barkeri (strain Fusaro /

Query: 1 NATCAPHTV 9
N CA HT+
Sbjct: 356 NRLCAYHTI 364




30|Sequence|146|155|PHTVCPVGWG

>sp|TIAS_METV3|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanococcus voltae (strain

Query: 1 PHTVCPVGWG 10
P+T CPV +G
Sbjct: 294 PNTKCPVLYG 303


>sp|TIAS_ARCFU|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Archaeoglobus fulgidus (strain

Query: 1 PHTVCPVGWG 10
P+T CPV +G
Sbjct: 206 PNTPCPVLYG 215


>sp|Y2160_ARCFU|UNCHARACTERIZED protein AF_2160|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 CPVGWG 10
C VGWG
Sbjct: 5 CSVGWG 10


>sp|TIAS_METJA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanocaldococcus jannaschii

Query: 1 PHTVCPVGWG 10
P+T CPV +G
Sbjct: 213 PNTPCPVLFG 222


>sp|PORB_PYRHO|PYRUVATE synthase subunit PorB|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 HTVCPVGW 9
H CP GW
Sbjct: 219 HCTCPTGW 226


>sp|TIAS_METKA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanopyrus kandleri (strain

Query: 1 PHTVCPVGWG 10
P+T CPV +G
Sbjct: 206 PNTPCPVLYG 215


>sp|PORB_METBF|PYRUVATE synthase subunit PorB|Methanosarcina barkeri (strain Fusaro /

Query: 5 CPVGWG 10
CP GWG
Sbjct: 210 CPTGWG 215


>sp|PYRB_METMJ|ASPARTATE carbamoyltransferase catalytic subunit|Methanoculleus marisnigri

Query: 2 HTVCPVG 8
HT+ PVG
Sbjct: 177 HTIAPVG 183


>sp|Y006_METJA|UNCHARACTERIZED oxidoreductase MJ0006|Methanocaldococcus jannaschii (strain

Query: 2 HTVCP 6
HT+CP
Sbjct: 5 HTICP 9


>sp|FDHA2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 2 HTVCP 6
HT+CP
Sbjct: 8 HTICP 12


>sp|PORB_PYRAB|PYRUVATE synthase subunit PorB|Pyrococcus abyssi (strain GE5 /

Query: 2 HTVCPVGW 9
H CP GW
Sbjct: 219 HCTCPTGW 226


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 1 PHTVCPVG 8
PH++ P+G
Sbjct: 613 PHSLFPIG 620


>sp|DCDA_THEAC|DIAMINOPIMELATE decarboxylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 HTVCPVG 8
HT+ PVG
Sbjct: 312 HTIIPVG 318


>sp|COBD_METTH|PROBABLE cobalamin biosynthesis protein CobD|Methanothermobacter

Query: 1 PHTVCPVGW 9
PH + PV W
Sbjct: 21 PHRLHPVVW 29


>sp|CMR4_PYRFU|CRISPR system Cmr endoribonuclease Cmr4|Pyrococcus furiosus (strain ATCC

Query: 2 HTVCPVGWG 10
HT PV WG
Sbjct: 34 HTGFPVIWG 42


>sp|ILVC_ARCFU|KETOL-ACID reductoisomerase (NAD(P)(+))|Archaeoglobus fulgidus (strain ATCC

Query: 3 TVCPVGWG 10
TVC +G+G
Sbjct: 19 TVCIIGYG 26


>sp|PYRC_SACS2|DIHYDROOROTASE solfataricus (strain ATCC 35092

Query: 1 PHTVCPVG 8
P+ +CP G
Sbjct: 271 PYEICPPG 278


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 PHTVCPVG 8
PH + PVG
Sbjct: 588 PHVLFPVG 595


>sp|DNLI_PYRIL|DNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 HTVCPVGWG 10
+TVC VG G
Sbjct: 469 YTVCKVGSG 477


>sp|DNLI_PYRCJ|DNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 HTVCPVGWG 10
+TVC VG G
Sbjct: 469 YTVCKVGSG 477


>sp|DNLI_PYRAR|DNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 HTVCPVGWG 10
+TVC VG G
Sbjct: 469 YTVCKVGSG 477


>sp|DNLI_PYRAE|DNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 HTVCPVGWG 10
+TVC VG G
Sbjct: 469 YTVCKVGSG 477


>sp|DNLI_CALMQ|DNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 HTVCPVGWG 10
+TVC VG G
Sbjct: 485 YTVCKVGSG 493


>sp|VORB_PYRAB|KETOISOVALERATE oxidoreductase subunit VorB|Pyrococcus abyssi (strain GE5 /

Query: 5 CPVGW 9
CP GW
Sbjct: 223 CPTGW 227


>sp|DNLI_PYRNV|DNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 HTVCPVGWG 10
+TVC VG G
Sbjct: 469 YTVCKVGSG 477


>sp|VORB_PYRFU|KETOISOVALERATE oxidoreductase subunit VorB|Pyrococcus furiosus (strain ATCC 43587

Query: 5 CPVGW 9
CP GW
Sbjct: 223 CPTGW 227


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 1 PHTVCPVG 8
PH++ P+G
Sbjct: 586 PHSLFPIG 593


>sp|VORB_PYRHO|KETOISOVALERATE oxidoreductase subunit VorB|Pyrococcus horikoshii (strain ATCC

Query: 5 CPVGW 9
CP GW
Sbjct: 223 CPTGW 227


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 PHTVCPVG 8
PH + PVG
Sbjct: 609 PHILFPVG 616


>sp|FDHA1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 2 HTVCP 6
HT+CP
Sbjct: 7 HTICP 11


>sp|Y749_METJA|UNCHARACTERIZED protein MJ0749|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VCPVG 8
VCPVG
Sbjct: 169 VCPVG 173


>sp|Y094_METJA|UNCHARACTERIZED protein MJ0094|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PHTVCPV 7
PHT C +
Sbjct: 90 PHTACDI 96


>sp|FILI_METH6|METHANOGENESIS regulatory histidine kinase FilI|Methanothrix harundinacea (strain

Query: 1 PHTVCPVGW 9
PH VGW
Sbjct: 801 PHPEIEVGW 809


>sp|SYT_METBU|THREONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 HTVCP 6
HT+CP
Sbjct: 359 HTLCP 363


>sp|PYRB_METHJ|ASPARTATE carbamoyltransferase catalytic subunit|Methanospirillum hungatei

Query: 2 HTVCPVGWG 10
HT+ P G G
Sbjct: 177 HTIAPKGLG 185


>sp|Y750_METJA|UNCHARACTERIZED protein MJ0750|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VCPVGW 9
VCP+G+
Sbjct: 127 VCPIGF 132


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 1 PHTVCPVG 8
PH + P+G
Sbjct: 591 PHVLFPIG 598


>sp|RL14_METKA|LARGE ribosomal subunit protein uL14|Methanopyrus kandleri (strain AV19

Query: 1 PHTVCPVG 8
PH PVG
Sbjct: 9 PHAALPVG 16


>sp|PYRB_METPE|ASPARTATE carbamoyltransferase catalytic subunit|Methanosphaerula palustris

Query: 2 HTVCPVG 8
HTV P G
Sbjct: 177 HTVAPAG 183


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 PHTVCPVG 8
PH + P+G
Sbjct: 708 PHVLFPIG 715


>sp|Y2319_HALLT|UPF0179 protein Hlac_2319|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 PHTVCP 6
PHT CP
Sbjct: 98 PHTECP 103


>sp|Y3004_HALWD|UPF0179 protein HQ_3004A|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PHTVCP 6
PHT CP
Sbjct: 98 PHTECP 103


>sp|Y1064_HALMA|UPF0179 protein rrnAC1064|Haloarcula marismortui (strain ATCC 43049

Query: 1 PHTVCP 6
PHT CP
Sbjct: 98 PHTECP 103


>sp|PORB_PYRFU|PYRUVATE synthase subunit PorB|Pyrococcus furiosus (strain ATCC 43587

Query: 5 CPVGW 9
CP GW
Sbjct: 222 CPTGW 226


>sp|GATD_METKA|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanopyrus kandleri (strain AV19 /

Query: 3 TVCPVGW 9
TVC GW
Sbjct: 242 TVCMHGW 248


>sp|Y574_METJA|UNCHARACTERIZED protein MJ0574|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 CPVGWG 10
CP+G+G
Sbjct: 4 CPIGFG 9


>sp|Y3004_HALS3|UPF0179 protein OE_3004R|Halobacterium salinarum (strain ATCC 29341

Query: 1 PHTVCP 6
PHT CP
Sbjct: 97 PHTECP 102


>sp|Y1401_HALSA|UPF0179 protein VNG_1401C|Halobacterium salinarum (strain ATCC 700922

Query: 1 PHTVCP 6
PHT CP
Sbjct: 97 PHTECP 102


>sp|TIAS_IGNH4|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignicoccus hospitalis (strain

Query: 1 PHTVCPVG 8
P VCP G
Sbjct: 177 PEVVCPKG 184




31|Sequence|151|160|PVGWGVRKKG

>sp|FAU1_THEPD|PROBABLE ribonuclease FAU-1|Thermofilum pendens (strain DSM 2475

Query: 1 PVGWGV 6
P GWGV
Sbjct: 186 PTGWGV 191


>sp|SYP_METHJ|PROLINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PVGWGVRKK 9
P G+G+RK+
Sbjct: 42 PFGFGIRKR 50


>sp|AMPPA_META3|AMP phosphorylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PVGWGVRKK 9
PVG+GV+ K
Sbjct: 283 PVGYGVKIK 291


>sp|T1SH_METJA|TYPE I restriction enzyme MjaIX|Methanocaldococcus jannaschii (strain

Query: 1 PVGWGVRKKG 10
P GW V++ G
Sbjct: 234 PKGWEVKRLG 243


>sp|FAU1_HALWD|PROBABLE ribonuclease FAU-1|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PVGWGV 6
P GWG+
Sbjct: 229 PTGWGI 234


>sp|SYP_METMJ|PROLINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PVGWGVRKKG 10
P G+G+RK+
Sbjct: 42 PHGFGIRKRA 51


>sp|Y1562_ARCFU|UNCHARACTERIZED protein AF_1562|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PVGWG 5
P GWG
Sbjct: 71 PTGWG 75


>sp|SYP_METAR|PROLINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 PVGWGVRKK 9
P G+ +RKK
Sbjct: 42 PFGFSIRKK 50


>sp|MDH_PYRAB|MALATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 1 PVGWGVRKKG 10
P GW + KG
Sbjct: 206 PEGWAINSKG 215


>sp|MFNA_METMJ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanoculleus marisnigri

Query: 1 PVGWGV 6
PVGW V
Sbjct: 327 PVGWRV 332


>sp|Y516_AERPE|UPF0113 protein APE_0516.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 PVGWGV 6
P+GWGV
Sbjct: 145 PLGWGV 150


>sp|RS9_PICTO|SMALL ribosomal subunit protein uS9|Picrophilus torridus (strain ATCC

Query: 1 PVGWGVRKK 9
P+G+G R K
Sbjct: 119 PMGYGARAK 127


>sp|MDH_PYRHO|MALATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PVGWGVRKKG 10
P GW + ++G
Sbjct: 206 PEGWAINREG 215


>sp|CCA_THEGJ|CCA-ADDING enzyme|Thermococcus gammatolerans (strain DSM 15229

Query: 2 VGWGVRKKG 10
+GW V +KG
Sbjct: 336 LGWDVGRKG 344


>sp|AATB_PYRFU|A-TYPE ATP synthase subunit B|Pyrococcus furiosus (strain ATCC 43587

Query: 4 WGVRKKG 10
WG ++KG
Sbjct: 36 WGEKRKG 42


>sp|DEOC_AERPE|DEOXYRIBOSE-PHOSPHATE aldolase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PVGWGVRKKG 10
P+G GV+ G
Sbjct: 191 PLGMGVKASG 200




32|Sequence|156|165|VRKKGTETED

>sp|AGLB1_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VRKKGTETED 10
VRK G + ED
Sbjct: 873 VRKSGKDNED 882


>sp|GATE_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina barkeri (strain Fusaro /

Query: 1 VRKKGTETED 10
+R+ G ETE+
Sbjct: 511 IRRNGVETEN 520


>sp|MCM_SACS2|MINICHROMOSOME maintenance protein MCM|Saccharolobus solfataricus (strain ATCC

Query: 1 VRKKGTETED 10
+RKK +ET D
Sbjct: 543 MRKKSSETPD 552


>sp|MCM_SACI5|MINICHROMOSOME maintenance protein MCM|Saccharolobus islandicus (strain REY15A)

Query: 1 VRKKGTETED 10
+RKK +ET D
Sbjct: 543 MRKKSSETPD 552


>sp|SYR_METMA|ARGININE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VRKKGTETED 10
+RK G E ED
Sbjct: 17 IRKAGFEVED 26




33|Sequence|161|170|TETEDVRCKQ

>sp|ASPD_METTH|L-ASPARTATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 TETEDVRC 8
T TE+VRC
Sbjct: 221 TITENVRC 228


>sp|PTAS_METTE|PHOSPHATE acetyltransferase|Methanosarcina thermophila

Query: 2 ETEDVRCKQ 10
ETED+R Q
Sbjct: 23 ETEDIRTLQ 31


>sp|XPD_SULAC|ATP-DEPENDENT DNA helicase XPD|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 ETEDVRCK 9
E+ED+ CK
Sbjct: 96 ESEDIPCK 103


>sp|MPGS_PYRAB|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 TETEDV 6
TETEDV
Sbjct: 28 TETEDV 33


>sp|MPGS_PYRFU|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TETEDV 6
TETEDV
Sbjct: 28 TETEDV 33




34|Sequence|166|175|VRCKQCARGT

>sp|Y021_METJA|PUTATIVE glycyl-radical enzyme activating enzyme|Methanocaldococcus

Query: 3 CKQCARG 9
CKQC +G
Sbjct: 21 CKQCVKG 27


>sp|SYA_METAR|ALANINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 CKQCARG 9
CK+C RG
Sbjct: 37 CKKCGRG 43


>sp|SYK_METBA|LYSINE--TRNA ligase|Methanosarcina barkeri

Query: 2 RCKQCARGT 10
RC QC R T
Sbjct: 172 RCDQCGRIT 180


>sp|SYM_METAR|METHIONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 CKQCARG 9
C QC RG
Sbjct: 138 CPQCQRG 144


>sp|SYG_AERPE|GLYCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 VRCKQCAR 8
VRC C R
Sbjct: 90 VRCTSCGR 97


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 1 VRCKQCAR 8
VRC +C R
Sbjct: 1010 VRCTKCNR 1017


>sp|SYK_METBF|LYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 RCKQCARGT 10
RC QC + T
Sbjct: 172 RCNQCGKIT 180


>sp|PURP_METAR|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanocella arvoryzae (strain DSM

Query: 2 RCKQCARG 9
RC CA+G
Sbjct: 47 RCAICAKG 54


>sp|SUCC_STAMF|SUCCINATE--COA ligase [ADP-forming] subunit beta|Staphylothermus marinus (strain

Query: 2 RCKQCARG 9
RC + ARG
Sbjct: 315 RCNEVARG 322


>sp|CPGS_METST|CYCLIC 2,3-diphosphoglycerate synthetase|Methanosphaera stadtmanae (strain

Query: 1 VRCKQCARG 9
V C++CA G
Sbjct: 223 VGCRRCAGG 231


>sp|CPGS_METKA|CYCLIC 2,3-diphosphoglycerate synthetase|Methanopyrus kandleri (strain

Query: 1 VRCKQCARG 9
V C++CA G
Sbjct: 219 VGCRRCAGG 227


>sp|RL37_SULTO|LARGE ribosomal subunit protein eL37|Sulfurisphaera tokodaii (strain

Query: 1 VRCKQCARGT 10
VRC++C R +
Sbjct: 17 VRCRRCGRNS 26


>sp|RL37_SULAC|LARGE ribosomal subunit protein eL37|Sulfolobus acidocaldarius (strain

Query: 1 VRCKQCARGT 10
VRC++C R +
Sbjct: 17 VRCRRCGRNS 26


>sp|AGLUS_ARCFU|ARCHAEAL glutamate synthase [NADPH]|Archaeoglobus fulgidus (strain ATCC

Query: 1 VRCKQCAR 8
+RC+ C R
Sbjct: 25 IRCRVCER 32


>sp|FDHB2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 3 CKQCARG 9
CK+CA G
Sbjct: 295 CKECALG 301


>sp|RL37_METS5|LARGE ribosomal subunit protein eL37|Metallosphaera sedula (strain ATCC

Query: 1 VRCKQCARGT 10
+RC++C R +
Sbjct: 17 IRCRRCGRNS 26




35|Sequence|171|180|CARGTFSDVP

>sp|REG1_PYRHO|UNCHARACTERIZED HTH-type transcriptional regulator PH0045|Pyrococcus horikoshii

Query: 3 RGTFSDV 9
RGTF DV
Sbjct: 110 RGTFRDV 116


>sp|REG1_PYRAB|UNCHARACTERIZED HTH-type transcriptional regulator PYRAB00550|Pyrococcus abyssi

Query: 3 RGTFSDV 9
RGTF DV
Sbjct: 110 RGTFRDV 116


>sp|ATGT_THEON|TRNA-GUANINE(15) transglycosylase|Thermococcus onnurineus (strain NA1)

Query: 4 GTFSDVP 10
GTF D+P
Sbjct: 122 GTFLDIP 128


>sp|ATGT_THEKO|TRNA-GUANINE(15) transglycosylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 GTFSDVP 10
GTF D+P
Sbjct: 122 GTFLDIP 128


>sp|ATGT_PYRHO|TRNA-GUANINE(15) transglycosylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 GTFSDVP 10
GTF D+P
Sbjct: 126 GTFLDIP 132


>sp|ATGT_PYRFU|TRNA-GUANINE(15) transglycosylase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 GTFSDVP 10
GTF D+P
Sbjct: 126 GTFLDIP 132


>sp|ATGT_PYRAB|TRNA-GUANINE(15) transglycosylase|Pyrococcus abyssi (strain GE5 /

Query: 4 GTFSDVP 10
GTF D+P
Sbjct: 126 GTFLDIP 132


>sp|NOP10_IGNH4|RIBOSOME biogenesis protein Nop10|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 CARGTFSDV 9
C R TF DV
Sbjct: 11 CGRYTFKDV 19


>sp|GLCD1_VULM7|GLUCOSE 1-dehydrogenase 1|Vulcanisaeta moutnovskia (strain 768-28)

Query: 1 CARGTFSD 8
C RGT+++
Sbjct: 106 CPRGTYAE 113


>sp|SYE_HALMA|GLUTAMATE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 CARGTFSDV 9
C +G FSD+
Sbjct: 206 CPQGEFSDL 214


>sp|ADEC_METMJ|ADENINE deaminase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 GTFSDVP 10
G F+DVP
Sbjct: 508 GAFTDVP 514




36|Sequence|176|185|FSDVPSSVMK

>sp|GCSPA_THEAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 FSDVPSSVMK 10
FSD+P SV K
Sbjct: 20 FSDIPKSVRK 29


>sp|GCSPA_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 FSDVPSSVMK 10
FSDVP ++K
Sbjct: 28 FSDVPEGMLK 37


>sp|GCSPA_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 FSDVPSSVMK 10
FSDVP ++K
Sbjct: 28 FSDVPKGMVK 37


>sp|GCSPA_THEKO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 FSDVPSSVMK 10
FSDVP ++K
Sbjct: 28 FSDVPKGMVK 37


>sp|ALF_HALVD|FRUCTOSE-BISPHOSPHATE aldolase class 2|Haloferax volcanii (strain ATCC 29605

Query: 3 DVPSSVM 9
D+PSS+M
Sbjct: 107 DIPSSIM 113


>sp|PRIS_METBU|DNA primase small subunit PriS|Methanococcoides burtonii (strain DSM

Query: 1 FSDVPSSVMK 10
F D+P +VM+
Sbjct: 38 FDDMPETVMR 47


>sp|NADE_THEAC|NH(3)-DEPENDENT NAD(+) synthetase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 DVPSSVMK 10
D+P S+MK
Sbjct: 169 DIPESIMK 176


>sp|PYRC_METKA|DIHYDROOROTASE kandleri (strain AV19 /

Query: 1 FSDVPSSV 8
F DVPS V
Sbjct: 307 FEDVPSGV 314


>sp|PCKG_SACS2|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FSDVPSSVM 9
F D+PS V+
Sbjct: 566 FEDIPSEVI 574




37|Sequence|181|190|SSVMKCKAYT

>sp|SAT_ARCFU|SULFATE adenylyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VMKCKAYT 10
+MKC AYT
Sbjct: 231 LMKCAAYT 238


>sp|IDI2_METBU|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanococcoides burtonii (strain DSM 6242

Query: 1 SSVMKCKAY 9
SSV++C+++
Sbjct: 253 SSVLECRSF 261


>sp|TRPD_METKA|ANTHRANILATE phosphoribosyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 4 MKCKAYT 10
++CK YT
Sbjct: 42 LRCKGYT 48




38|Sequence|186|195|CKAYTDCLSQ

>sp|TMCA_HALVD|TRNA(MET) cytidine acetyltransferase TmcA|Haloferax volcanii (strain ATCC

Query: 2 KAYTDCLS 9
+AY DCL+
Sbjct: 202 RAYEDCLT 209


>sp|Y1859_ARCFU|UNCHARACTERIZED protein AF_1859|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CKAYTDCL 8
CK+ DCL
Sbjct: 52 CKSVDDCL 59


>sp|Y1252_METJA|UNCHARACTERIZED protein MJ1252|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CKAYTDCLS 9
CKA+ C S
Sbjct: 2 CKAFCSCYS 10


>sp|MCH_META3|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 CKAYTDCLSQ 10
CKA C SQ
Sbjct: 254 CKALPSCSSQ 263


>sp|Y663_METJA|UNCHARACTERIZED protein MJ0663|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KAYTDCL 8
KA+ DCL
Sbjct: 138 KAFADCL 144


>sp|MTNA_METST|PUTATIVE methylthioribose-1-phosphate isomerase|Methanosphaera stadtmanae

Query: 1 CKAYTDCL 8
C+ YTD +
Sbjct: 29 CRTYTDVI 36


>sp|AGL14_HALVD|PROBABLE low-salt glycan biosynthesis reductase|Haloferax volcanii (strain

Query: 1 CKAYTD 6
C AYTD
Sbjct: 68 CAAYTD 73




39|Sequence|191|200|DCLSQNLVVI

>sp|CDC61_THEAC|PUTATIVE ORC1-type DNA replication protein|Thermoplasma acidophilum (strain

Query: 1 DCLSQNLVVI 10
DC+S+NL VI
Sbjct: 277 DCISRNLSVI 286


>sp|FAU1_SULAC|PROBABLE ribonuclease FAU-1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 CLSQNLVV 9
CLS+ LV+
Sbjct: 103 CLSEGLVI 110


>sp|FAU1_SACI7|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 DCLSQNLVV 9
DC+ QN ++
Sbjct: 416 DCIQQNKLI 424


>sp|FAU1_SACI6|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.16.4 /

Query: 1 DCLSQNLVV 9
DC+ QN ++
Sbjct: 416 DCIQQNKLI 424


>sp|FAU1_SACI4|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.14.25 /

Query: 1 DCLSQNLVV 9
DC+ QN ++
Sbjct: 416 DCIQQNKLI 424


>sp|FAU1_SACI3|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.16.27)

Query: 1 DCLSQNLVV 9
DC+ QN ++
Sbjct: 416 DCIQQNKLI 424


>sp|FAU1_SACI2|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 DCLSQNLVV 9
DC+ QN ++
Sbjct: 416 DCIQQNKLI 424




40|Sequence|196|205|NLVVIKPGTK

>sp|TIAS_IGNH4|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignicoccus hospitalis (strain

Query: 3 VVIKPGTK 10
VV+KPG+K
Sbjct: 287 VVVKPGSK 294


>sp|FLPA_METMJ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanoculleus marisnigri (strain

Query: 1 NLVVIKPG 8
NLV +KPG
Sbjct: 136 NLVFLKPG 143


>sp|KGSDH_SACS2|2,5-DIOXOPENTANOATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NLVVIKPGTK 10
N VIKP TK
Sbjct: 167 NTAVIKPATK 176


>sp|MAP2_THEON|METHIONINE aminopeptidase|Thermococcus onnurineus (strain NA1)

Query: 4 VIKPGTK 10
+IKPGTK
Sbjct: 24 LIKPGTK 30


>sp|SYM_METMJ|METHIONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 IKPGTK 10
+KPGTK
Sbjct: 657 VKPGTK 662


>sp|Y916_METST|UPF0425 pyridoxal phosphate-dependent protein Msp_0916|Methanosphaera

Query: 2 LVVIKPGTK 10
+ ++KPGTK
Sbjct: 91 IALVKPGTK 99


>sp|ACSA_PYRAE|ACETYL-COENZYME A synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LVVIKPGT 9
LV +KPGT
Sbjct: 446 LVPMKPGT 453


>sp|ACSA_PYRAR|ACETYL-COENZYME A synthetase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 LVVIKPGT 9
LV +KPGT
Sbjct: 446 LVPMKPGT 453


>sp|RL10E_ARCFU|LARGE ribosomal subunit protein uL16|Archaeoglobus fulgidus (strain ATCC

Query: 5 IKPGTK 10
+KPGTK
Sbjct: 125 VKPGTK 130




41|Sequence|201|210|KPGTKETDNV

>sp|TRM1_METBF|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina barkeri

Query: 2 PGTKETD 8
PGTK+TD
Sbjct: 233 PGTKQTD 239


>sp|Y462_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 2 PGTKETDNV 10
PG +E DN+
Sbjct: 284 PGVREGDNL 292


>sp|VHUG_METVO|F420-NON-REDUCING hydrogenase vhu subunit G|Methanococcus voltae

Query: 3 GTKETDNV 10
GT+ TDNV
Sbjct: 111 GTETTDNV 118




42|Sequence|206|215|ETDNVCGTLP

>sp|SUI1_SULTO|PROTEIN translation factor SUI1 homolog|Sulfurisphaera tokodaii (strain

Query: 2 TDNVCGTLP 10
+DN+CG LP
Sbjct: 2 SDNLCGGLP 10


>sp|SUI1_METS5|PROTEIN translation factor SUI1 homolog|Metallosphaera sedula (strain

Query: 3 DNVCGTLP 10
DN+CG LP
Sbjct: 3 DNLCGGLP 10


>sp|AMT2_METJA|AMMONIUM transporter Amt2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DNVCGTLP 10
D+VCG +P
Sbjct: 325 DDVCGVVP 332


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 3 DNVCGTL 9
+N+CGTL
Sbjct: 806 ENLCGTL 812


>sp|Y528_METMP|PROBABLE minor pilin MMP0528|Methanococcus maripaludis (strain DSM 14266

Query: 2 TDNVCGTL 9
T+NVCG +
Sbjct: 60 TENVCGNI 67


>sp|SYS_METS5|SERINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 ETDNVCGTLP 10
E DN+ TLP
Sbjct: 96 ERDNILRTLP 105


>sp|GGR2_METBU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanococcoides burtonii (strain DSM 6242

Query: 1 ETDNVCG 7
E D VCG
Sbjct: 129 ENDTVCG 135




43|Sequence|211|220|CGTLPSFSSS

>sp|PUS10_IGNAA|TRNA pseudouridine synthase Pus10|Ignisphaera aggregans (strain DSM

Query: 3 TLPSFSS 9
T+PSFSS
Sbjct: 404 TVPSFSS 410


>sp|HCP_METVS|HYDROXYLAMINE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 1 CGTLPSF 7
CG LP F
Sbjct: 102 CGELPDF 108


>sp|XACC_HALVD|PENTONOLACTONASE XacC|Haloferax volcanii (strain ATCC 29605

Query: 1 CGTLPS 6
CGT+PS
Sbjct: 109 CGTMPS 114


>sp|OGT_ARCFU|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 TLPSFSSS 10
T PSFSSS
Sbjct: 27 TYPSFSSS 34


>sp|Y3936_METAC|UPF0060 membrane protein MA_3936|Methanosarcina acetivorans (strain ATCC

Query: 1 CGTLPSFSSS 10
CG +P+F S
Sbjct: 48 CGIIPTFQPS 57


>sp|FLUC_IGNH4|FLUORIDE-SPECIFIC ion channel FluC|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 CGTLPSFSS 9
CG L +FS+
Sbjct: 71 CGALSTFST 79


>sp|Y606_METJA|UNCHARACTERIZED protein MJ0606|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CGTLPSF 7
CG LP F
Sbjct: 70 CGVLPFF 76


>sp|FLUC_THEKO|FLUORIDE-SPECIFIC ion channel FluC|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 CGTLPSFSS 9
CG L +FS+
Sbjct: 74 CGALSTFST 82




44|Sequence|216|225|SFSSSTSPSP

***** No hits found ******


45|Sequence|221|230|TSPSPGTAIF

>sp|RL18_HALMA|LARGE ribosomal subunit protein uL18|Haloarcula marismortui (strain ATCC

Query: 2 SPSPGTAIF 10
SP+PG+ +F
Sbjct: 109 SPTPGSKVF 117


>sp|SYW_METKA|TRYPTOPHAN--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 TSPSPGTAIF 10
+S P TAIF
Sbjct: 249 SSSKPNTAIF 258


>sp|MJK1_METJA|POTASSIUM channel protein 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TSPSPGTAI 9
TSP P T I
Sbjct: 299 TSPPPDTVI 307


>sp|RASEA_THEKO|ARCHAEOSINE synthase subunit beta|Thermococcus kodakarensis (strain ATCC

Query: 5 PGTAIF 10
PGTA+F
Sbjct: 14 PGTALF 19


>sp|Y2001_PYRHO|UNCHARACTERIZED protein PH2001|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 TSPSPGTAIF 10
T+PS TAIF
Sbjct: 73 TAPSAMTAIF 82




46|Sequence|226|235|GTAIFPRPEH

>sp|Y665_METJA|UNCHARACTERIZED protein MJ0665|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 IFPRPEH 10
+FPR EH
Sbjct: 225 VFPRDEH 231


>sp|PANB_CENSY|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Cenarchaeum symbiosum (strain A)

Query: 5 FPRPEH 10
FPRPE+
Sbjct: 243 FPRPEN 248


>sp|Y812_ARCFU|UNCHARACTERIZED protein AF_0812|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 IFPRPEH 10
IFP+PE+
Sbjct: 60 IFPKPEY 66


>sp|EHAA_METTH|PROBABLE [NiFe]-hydrogenase-type-3 Eha complex

Query: 4 IFPRPE 9
IFPRPE
Sbjct: 90 IFPRPE 95


>sp|EHAA_METTM|PROBABLE [NiFe]-hydrogenase-type-3 Eha complex

Query: 4 IFPRPE 9
IFPRPE
Sbjct: 91 IFPRPE 96


>sp|UPPS_THEVO|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Thermoplasma

Query: 5 FPRPEH 10
+PRP H
Sbjct: 26 YPRPRH 31


>sp|UPPS_THEAC|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Thermoplasma

Query: 5 FPRPEH 10
+PRP H
Sbjct: 26 YPRPRH 31


>sp|PPSA_AERPE|PHOSPHOENOLPYRUVATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GTAIFPRP 8
+AI+PRP
Sbjct: 576 ASAIYPRP 583


>sp|PORB_PYRFU|PYRUVATE synthase subunit PorB|Pyrococcus furiosus (strain ATCC 43587

Query: 3 AIFPRPEH 10
AI PRPE
Sbjct: 324 AILPRPEE 331


>sp|PORB_PYRHO|PYRUVATE synthase subunit PorB|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 AIFPRPEH 10
AI PRPE
Sbjct: 324 AILPRPEE 331


>sp|PPSA_STAMF|PROBABLE phosphoenolpyruvate synthase|Staphylothermus marinus (strain ATCC

Query: 3 AIFPRP 8
AI+PRP
Sbjct: 589 AIYPRP 594


>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 3 AIFPRPEH 10
+I P PEH
Sbjct: 651 SIIPYPEH 658


>sp|ADHS_METJA|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GTAIFPRP 8
GTAI P P
Sbjct: 89 GTAISPNP 96


>sp|EHAA_METKA|PROBABLE [NiFe]-hydrogenase-type-3 Eha complex membrane|Methanopyrus

Query: 4 IFPRPE 9
+FPRPE
Sbjct: 90 VFPRPE 95


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 3 AIFPRPEH 10
+I P PEH
Sbjct: 653 SIIPYPEH 660


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 3 AIFPRPEH 10
+I P PEH
Sbjct: 653 SIIPYPEH 660


>sp|SYL_AERPE|LEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 TAIFPR 7
TAIFPR
Sbjct: 613 TAIFPR 618


>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 3 AIFPRPEH 10
+I P PEH
Sbjct: 727 SIIPYPEH 734


>sp|SYV_AERPE|VALINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 5 FPRPE 9
FPRPE
Sbjct: 608 FPRPE 612


>sp|PANB_PYRCJ|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 FPRPEH 10
FP PEH
Sbjct: 257 FPTPEH 262


>sp|AROC_KORCO|CHORISMATE synthase|Korarchaeum cryptofilum (strain OPF8)

Query: 5 FPRPEH 10
FPRP H
Sbjct: 101 FPRPGH 106


>sp|THPR_AERPE|RNA 2',3'-cyclic phosphodiesterase|Aeropyrum pernix (strain ATCC

Query: 1 GTAIFPRPEH 10
G FPRP+
Sbjct: 63 GLGAFPRPDR 72


>sp|SYDND_METMA|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GTAIFP 6
GTA+FP
Sbjct: 178 GTALFP 183


>sp|SYDND_METAC|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GTAIFP 6
GTA+FP
Sbjct: 178 GTALFP 183


>sp|SYDND_METBF|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GTAIFP 6
GTA+FP
Sbjct: 178 GTALFP 183




47|Sequence|231|240|PRPEHMETHE

>sp|DAPA_NATPD|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PRPEHMETH 9
P PE METH
Sbjct: 113 PEPEGMETH 121


>sp|Y351_METJA|UNCHARACTERIZED protein MJ0351|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RPEHME 7
+PEHME
Sbjct: 132 KPEHME 137


>sp|CSM4_METJA|CRISPR system Cms protein Csm4|Methanocaldococcus jannaschii (strain

Query: 1 PRPEHMETHE 10
P+PEH E ++
Sbjct: 76 PKPEHPEFYK 85


>sp|Y1560_ARCFU|UNCHARACTERIZED protein AF_1560|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PEHMETH 9
PEH+E++
Sbjct: 102 PEHLESY 108


>sp|RL21_METTH|LARGE ribosomal subunit protein eL21|Methanothermobacter

Query: 2 RPEHMETHE 10
RPEH++ E
Sbjct: 88 RPEHLQMQE 96


>sp|TIAS_THEVO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermoplasma volcanium (strain

Query: 1 PRPEHMETHE 10
P PE +ET +
Sbjct: 182 PHPEEIETEK 191




48|Sequence|236|245|METHEVPSST

>sp|CISY_SACS2|CITRATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 HEVPSST 10
HEVP+ST
Sbjct: 183 HEVPAST 189


>sp|SAT_STAMF|SULFATE adenylyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 2 ETHEVPS 8
ETHE+PS
Sbjct: 26 ETHELPS 32


>sp|CISY_THEAC|CITRATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 HEVPSST 10
HEVP+ST
Sbjct: 188 HEVPAST 194


>sp|GRPE_METBF|PROTEIN GrpE|Methanosarcina barkeri (strain Fusaro /

Query: 1 METHEVPSST 10
+ET EVP +T
Sbjct: 168 IETSEVPDNT 177


>sp|SURE_THEKO|5'-NUCLEOTIDASE SurE|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 THEVPS 8
THEVPS
Sbjct: 116 THEVPS 121


>sp|GRPE_METAC|PROTEIN GrpE|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 METHEVPSST 10
+ET EVP +T
Sbjct: 168 IETSEVPDNT 177


>sp|GRPE_METMZ|PROTEIN GrpE|Methanosarcina mazei (Methanosarcina frisia)

Query: 1 METHEVPSST 10
+ET EVP +T
Sbjct: 168 IETSEVPDNT 177


>sp|GRPE_METMA|PROTEIN GrpE|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 METHEVPSST 10
+ET EVP +T
Sbjct: 168 IETSEVPDNT 177


>sp|MALQ_THELN|4-ALPHA-GLUCANOTRANSFERASE litoralis (strain ATCC 51850

Query: 4 HEVPSST 10
HEVP +T
Sbjct: 444 HEVPEAT 450


>sp|SYS2_METBF|TYPE-2 serine--tRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 THEVPS 8
THEVP+
Sbjct: 282 THEVPT 287


>sp|QUEC_HALSA|7-CYANO-7-DEAZAGUANINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 METHEVPSS 9
ME+ E+P+S
Sbjct: 89 MESDEIPTS 97


>sp|QUEC_HALS3|7-CYANO-7-DEAZAGUANINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 METHEVPSS 9
ME+ E+P+S
Sbjct: 89 MESDEIPTS 97




49|Sequence|241|250|VPSSTYVPKG

>sp|DNLI_METTP|DNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 PSSTYVP 8
PSSTY P
Sbjct: 399 PSSTYTP 405


>sp|DNLI_ARCFU|DNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VPSSTYVP 8
+PSS Y+P
Sbjct: 401 LPSSPYIP 408


>sp|KAE1B_PICTO|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 SSTYVPK 9
SSTYVP+
Sbjct: 28 SSTYVPE 34


>sp|BACR_HALSR|CRUXRHODOPSIN-2 sp. (strain arg-2 /

Query: 4 STYVPKG 10
STYVP G
Sbjct: 7 STYVPGG 13


>sp|AROE_SULAC|SHIKIMATE dehydrogenase (NADP(+))|Sulfolobus acidocaldarius (strain ATCC

Query: 2 PSSTYVP 8
P+S+YVP
Sbjct: 186 PNSSYVP 192


>sp|RNZ_NATPD|RIBONUCLEASE Z|Natronomonas pharaonis (strain ATCC 35678

Query: 2 PSSTYVPKG 10
P S YVP G
Sbjct: 85 PLSVYVPSG 93


>sp|DNLI_NATPD|DNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 PSSTYVP 8
P STY P
Sbjct: 405 PDSTYTP 411


>sp|TREZ_SACSO|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (Sulfolobus

Query: 2 PSSTYVPKG 10
P+S Y P+G
Sbjct: 70 PASRYQPEG 78


>sp|TREZ_SACS2|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PSSTYVPKG 10
P+S Y P+G
Sbjct: 70 PASRYQPEG 78


>sp|RPO5_NITMS|DNA-DIRECTED RNA polymerase subunit Rpo5|Nitrosopumilus maritimus (strain

Query: 1 VPSSTYVPK 9
VP YVPK
Sbjct: 10 VPDHIYVPK 18




50|Sequence|246|255|YVPKGMNSTE

>sp|RNP3_METBU|RIBONUCLEASE P protein component 3|Methanococcoides burtonii (strain DSM 6242

Query: 1 YVPKGMNSTE 10
YVP G N+ E
Sbjct: 13 YVPDGKNTAE 22


>sp|IXTPA_PYRAE|DITP/XTP pyrophosphatase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 YVPKGMNST 9
++P+GM +T
Sbjct: 146 FIPEGMTAT 154


>sp|SRP54_METAR|SIGNAL recognition particle 54 kDa|Methanocella arvoryzae (strain DSM

Query: 3 PKGMNSTE 10
P GMNS E
Sbjct: 66 PAGMNSKE 73


>sp|PURA_THEAC|ADENYLOSUCCINATE synthetase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YVPKGMNSTE 10
YVP+ MN+ +
Sbjct: 361 YVPRDMNTIK 370


>sp|AATA_METVS|A-TYPE ATP synthase subunit A|Methanococcus vannielii (strain ATCC 35089

Query: 1 YVPKGMN 7
Y+P+G+N
Sbjct: 102 YIPRGVN 108


>sp|MCRD_METVA|METHYL-COENZYME M reductase operon protein|Methanococcus vannielii

Query: 2 VPKGMNSTE 10
+PK NSTE
Sbjct: 152 IPKSENSTE 160


>sp|SRP54_METLZ|SIGNAL recognition particle 54 kDa|Methanocorpusculum labreanum (strain

Query: 2 VPKGMNSTE 10
+PKG+N+ E
Sbjct: 65 LPKGINARE 73


>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 3 PKGMNSTE 10
P G+N+TE
Sbjct: 305 PNGVNTTE 312


>sp|RBLL_ARCFU|RIBULOSE bisphosphate carboxylase-like protein|Archaeoglobus fulgidus

Query: 3 PKGMNSTE 10
PKGMN E
Sbjct: 41 PKGMNPFE 48


>sp|PYRG_PYRAE|CTP synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 KGMNSTE 10
KG NSTE
Sbjct: 396 KGANSTE 402


>sp|HIS8_METM7|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain C7 /

Query: 2 VPKGMNSTE 10
V GMNS+E
Sbjct: 315 VKNGMNSSE 323


>sp|HIS8_METM6|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain C6 /

Query: 2 VPKGMNSTE 10
V GMNS+E
Sbjct: 315 VKNGMNSSE 323


>sp|HIS8_METM5|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain C5 /

Query: 2 VPKGMNSTE 10
V GMNS+E
Sbjct: 315 VKNGMNSSE 323


>sp|HIS8_METMP|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain DSM 14266

Query: 2 VPKGMNSTE 10
V GMNS+E
Sbjct: 315 VKNGMNSSE 323


>sp|GSA_METST|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 YVPKGMNS 8
Y+P G+NS
Sbjct: 16 YLPGGVNS 23




51|Sequence|251|260|MNSTESNSSA

***** No hits found ******


52|Sequence|256|265|SNSSASVRPK

>sp|RIBL_THEVO|FAD synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 NSSASVRPK 10
NSS+SVR K
Sbjct: 125 NSSSSVRKK 133




53|Sequence|261|270|SVRPKVLSSI

>sp|SYFA_SACS2|PHENYLALANINE--TRNA ligase alpha subunit|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VRPKVLSSI 10
+RP++LSS+
Sbjct: 415 LRPEILSSV 423


>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 1 SVRPKVLS 8
S+RP VLS
Sbjct: 396 SIRPDVLS 403


>sp|AATE_THEPD|A-TYPE ATP synthase subunit E|Thermofilum pendens (strain DSM 2475

Query: 1 SVRPKVLS 8
SV+PKVL
Sbjct: 201 SVKPKVLE 208




54|Sequence|266|275|VLSSIQEGTV

>sp|ILVC_METS3|KETOL-ACID reductoisomerase (NADP(+))|Methanobrevibacter smithii (strain ATCC

Query: 1 VLSSIQEGT 9
VLS IQ+GT
Sbjct: 277 VLSEIQDGT 285


>sp|PYRG_SULTO|CTP synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VLSSIQEGTV 10
VLSS+ +GTV
Sbjct: 11 VLSSVGKGTV 20


>sp|COOS_METKA|CARBON monoxide dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 VLSSIQEGTV 10
VL I+EGT+
Sbjct: 434 VLKLIEEGTI 443


>sp|PYRG_SULAC|CTP synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VLSSIQEGTV 10
VLSS+ +GT+
Sbjct: 11 VLSSVGKGTI 20




55|Sequence|271|280|QEGTVPDNTS

>sp|LHRC_METJA|ATP-DEPENDENT helicase Lhr-Core|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GTVPDNTS 10
GT+PD T+
Sbjct: 497 GTIPDETA 504


>sp|ATRMA_PYRFU|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus furiosus (strain

Query: 1 QEGTVPDNTS 10
+EG +PD TS
Sbjct: 194 KEGELPDPTS 203


>sp|QUEC_METBF|7-CYANO-7-DEAZAGUANINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 QEGTVPDNT 9
+ GT PDN+
Sbjct: 137 EAGTFPDNS 145


>sp|RPO2C_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 1 QEGTVPD 7
QEG VPD
Sbjct: 390 QEGVVPD 396


>sp|RPO2C_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 1 QEGTVPD 7
QEG VPD
Sbjct: 390 QEGVVPD 396


>sp|CSG_METBF|MAJOR S-layer protein|Methanosarcina barkeri (strain Fusaro /

Query: 4 TVPDNTS 10
T+PDNTS
Sbjct: 604 TMPDNTS 610


>sp|RIFK_CALMQ|RIBOFLAVIN kinase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 QEGTVPDNTS 10
Q GT P N S
Sbjct: 43 QMGTTPQNIS 52


>sp|SUI1_METJA|PROTEIN translation factor SUI1 homolog|Methanocaldococcus jannaschii

Query: 3 GTVPDNT 9
GTV DNT
Sbjct: 69 GTVKDNT 75


>sp|ATRMA_PYRAB|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 QEGTVPDNTS 10
+EG +PD T+
Sbjct: 193 KEGNLPDPTN 202


>sp|QUEC_METAC|7-CYANO-7-DEAZAGUANINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QEGTVPDNT 9
+ GT PDN+
Sbjct: 137 EAGTFPDNS 145


>sp|QUEC_METMA|7-CYANO-7-DEAZAGUANINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QEGTVPDNT 9
+ GT PDN+
Sbjct: 137 EAGTFPDNS 145


>sp|TRPB1_THEKO|TRYPTOPHAN synthase beta chain 1|Thermococcus kodakarensis (strain ATCC

Query: 2 EGTVPD 7
EGT+PD
Sbjct: 218 EGTLPD 223


>sp|HISX_METTH|HISTIDINOL dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 QEGTVPD 7
Q+G+VPD
Sbjct: 160 QDGSVPD 166


>sp|GLPK2_SULAC|GLYCEROL kinase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GTVPDN 8
G+VPDN
Sbjct: 329 GSVPDN 334


>sp|SURE_NATPD|5'-NUCLEOTIDASE SurE|Natronomonas pharaonis (strain ATCC 35678

Query: 2 EGTVPD 7
EGT+PD
Sbjct: 213 EGTIPD 218


>sp|LYSZ_IGNH4|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Ignicoccus hospitalis

Query: 2 EGTVPD 7
+GTVPD
Sbjct: 244 DGTVPD 249


>sp|RF1_METBU|PEPTIDE chain release factor subunit|Methanococcoides burtonii (strain

Query: 3 GTVPDN 8
GTVP+N
Sbjct: 80 GTVPEN 85




56|Sequence|276|285|PDNTSSARGK

>sp|TRPE2_HALSA|ANTHRANILATE synthase component 1 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 PDNTSSARG 9
PD T+ ARG
Sbjct: 122 PDTTTDARG 130


>sp|Y1513_METJA|UNCHARACTERIZED protein MJ1513|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PDNTSSARGK 10
P N S RGK
Sbjct: 45 PGNNDSKRGK 54


>sp|CSG_METBF|MAJOR S-layer protein|Methanosarcina barkeri (strain Fusaro /

Query: 1 PDNTSS 6
PDNTSS
Sbjct: 606 PDNTSS 611


>sp|GCSPB_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 1 PDNTSSAR 8
P NT+SAR
Sbjct: 482 PRNTTSAR 489




57|Sequence|281|290|SARGKEDVNK

>sp|PYRI_METAC|ASPARTATE carbamoyltransferase regulatory chain|Methanosarcina acetivorans

Query: 2 ARGKEDVNK 10
ARGK+DV K
Sbjct: 52 ARGKKDVVK 60


>sp|PORB_METTH|PYRUVATE synthase subunit PorB|Methanothermobacter thermautotrophicus

Query: 2 ARGKEDVN 9
A+G++DVN
Sbjct: 82 AKGRDDVN 89


>sp|DNLI_PICTO|DNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 SARGKEDVNK 10
S R +ED+N+
Sbjct: 72 SGRSEEDINR 81




58|Sequence|286|295|EDVNKTLPNL

>sp|AGL9_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl9|Haloferax volcanii

Query: 1 EDVNKTLPN 9
EDV+KT+P+
Sbjct: 240 EDVSKTIPD 248


>sp|PPS_METJA|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EDVNKTLPNL 10
+D NK +PNL
Sbjct: 142 DDANKQIPNL 151


>sp|Y1524_METJA|UPF0166 protein MJ1524|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EDVNKTLPNL 10
E++N+ LP L
Sbjct: 75 ENINRVLPKL 84


>sp|DNLI1_METMA|DNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EDVNKTLP 8
EDV KT+P
Sbjct: 280 EDVRKTVP 287


>sp|GATB_SULTO|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Sulfurisphaera tokodaii (strain DSM

Query: 1 EDVNKTLPNL 10
E++ KTLP L
Sbjct: 285 EEIRKTLPEL 294


>sp|DNLI_METMJ|DNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 EDVNKTLPNL 10
EDV ++LP++
Sbjct: 269 EDVTESLPDI 278


>sp|METK_PYRFU|S-ADENOSYLMETHIONINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EDVNKTLP 8
ED+ KTLP
Sbjct: 327 EDIAKTLP 334


>sp|TIAS_PYRNV|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrobaculum neutrophilum

Query: 2 DVNKTLPNL 10
DV+ T+PN
Sbjct: 397 DVDPTIPNF 405


>sp|AMTAB_METJA|PROBABLE threonylcarbamoyladenosine tRNA

Query: 1 EDVNKTL 7
ED+NKTL
Sbjct: 128 EDINKTL 134


>sp|DNLI_METB6|DNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 EDVNKTLPNL 10
EDV++ LP++
Sbjct: 269 EDVSEALPDV 278


>sp|COOS_ARCFU|CARBON monoxide dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DVNKTLPNL 10
D+N TLP+L
Sbjct: 331 DMNCTLPSL 339


>sp|PSTS_METJA|PHOSPHATE-BINDING protein PstS|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EDVNKTLPNL 10
ED KT PN+
Sbjct: 71 EDYQKTHPNV 80


>sp|Y1954_ARCFU|PUTATIVE amidase AF_1954|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EDVNKTLPNL 10
E+V +LPNL
Sbjct: 282 EEVKLSLPNL 291


>sp|CFBD_METJA|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanocaldococcus

Query: 2 DVNKTLPNL 10
D+NK LP +
Sbjct: 232 DINKGLPKI 240


>sp|GLMS_METJA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanocaldococcus jannaschii

Query: 3 VNKTLPNL 10
+NK PNL
Sbjct: 667 INKNFPNL 674


>sp|TRM56_METMP|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanococcus maripaludis

Query: 1 EDVNKTLPNL 10
ED++KT NL
Sbjct: 98 EDISKTNKNL 107




59|Sequence|291|300|TLPNLQVVNH

>sp|RL15E_HALMA|LARGE ribosomal subunit protein eL15|Haloarcula marismortui (strain ATCC

Query: 1 TLPNLQVVN 9
T PNL+V+N
Sbjct: 109 TFPNLRVLN 117


>sp|TRPE1_HALMA|ANTHRANILATE synthase component 1 1|Haloarcula marismortui (strain ATCC 43049

Query: 2 LPNLQVVNH 10
LPNLQV +
Sbjct: 131 LPNLQVARY 139


>sp|BIOD_METVS|ATP-DEPENDENT dethiobiotin synthetase BioD|Methanococcus vannielii (strain ATCC

Query: 3 PNLQVVNH 10
PNL +NH
Sbjct: 137 PNLGTINH 144


>sp|IF2B_METS5|TRANSLATION initiation factor 2 subunit|Metallosphaera sedula (strain ATCC

Query: 1 TLPNLQVVN 9
TLP L ++N
Sbjct: 30 TLPTLSIIN 38


>sp|HELS_NATPD|ATP-DEPENDENT DNA helicase Hel308|Natronomonas pharaonis (strain ATCC 35678

Query: 3 PNLQVV 8
PNLQVV
Sbjct: 171 PNLQVV 176


>sp|RL15E_THEON|LARGE ribosomal subunit protein eL15|Thermococcus onnurineus (strain NA1)

Query: 2 LPNLQVVN 9
PNL+V+N
Sbjct: 108 FPNLEVLN 115


>sp|RL15E_THEKO|LARGE ribosomal subunit protein eL15|Thermococcus kodakarensis (strain

Query: 2 LPNLQVVN 9
PNL+V+N
Sbjct: 108 FPNLEVLN 115


>sp|RL15E_THEGJ|LARGE ribosomal subunit protein eL15|Thermococcus gammatolerans (strain

Query: 2 LPNLQVVN 9
PNL+V+N
Sbjct: 108 FPNLEVLN 115


>sp|RL15E_PYRHO|LARGE ribosomal subunit protein eL15|Pyrococcus horikoshii (strain ATCC

Query: 2 LPNLQVVN 9
PNL+V+N
Sbjct: 108 FPNLEVLN 115


>sp|RL15E_PYRFU|LARGE ribosomal subunit protein eL15|Pyrococcus furiosus (strain ATCC

Query: 2 LPNLQVVN 9
PNL+V+N
Sbjct: 108 FPNLEVLN 115


>sp|RL15E_PYRAB|LARGE ribosomal subunit protein eL15|Pyrococcus abyssi (strain GE5 /

Query: 2 LPNLQVVN 9
PNL+V+N
Sbjct: 108 FPNLEVLN 115


>sp|RL15E_THEVO|LARGE ribosomal subunit protein eL15|Thermoplasma volcanium (strain ATCC

Query: 3 PNLQVVN 9
PNL+V+N
Sbjct: 112 PNLEVLN 118


>sp|RL15E_STAMF|LARGE ribosomal subunit protein eL15|Staphylothermus marinus (strain ATCC

Query: 3 PNLQVVN 9
PNL+V+N
Sbjct: 111 PNLEVLN 117


>sp|RL15E_PYRAE|LARGE ribosomal subunit protein eL15|Pyrobaculum aerophilum (strain ATCC

Query: 3 PNLQVVN 9
PNL+V+N
Sbjct: 111 PNLEVLN 117


>sp|RL15E_METST|LARGE ribosomal subunit protein eL15|Methanosphaera stadtmanae (strain

Query: 3 PNLQVVN 9
PNL+V+N
Sbjct: 112 PNLEVLN 118


>sp|RL15E_METMA|LARGE ribosomal subunit protein eL15|Methanosarcina mazei (strain ATCC

Query: 3 PNLQVVN 9
PNL+V+N
Sbjct: 111 PNLEVLN 117


>sp|RL15E_METM7|LARGE ribosomal subunit protein eL15|Methanococcus maripaludis (strain C7

Query: 3 PNLQVVN 9
PNL+V+N
Sbjct: 109 PNLEVLN 115


>sp|RL15E_METM6|LARGE ribosomal subunit protein eL15|Methanococcus maripaludis (strain C6

Query: 3 PNLQVVN 9
PNL+V+N
Sbjct: 109 PNLEVLN 115


>sp|RL15E_METKA|LARGE ribosomal subunit protein eL15|Methanopyrus kandleri (strain AV19 /

Query: 3 PNLQVVN 9
PNL+V+N
Sbjct: 112 PNLEVLN 118


>sp|RL15E_METAC|LARGE ribosomal subunit protein eL15|Methanosarcina acetivorans (strain

Query: 3 PNLQVVN 9
PNL+V+N
Sbjct: 111 PNLEVLN 117


>sp|RL15E_META3|LARGE ribosomal subunit protein eL15|Methanococcus aeolicus (strain ATCC

Query: 3 PNLQVVN 9
PNL+V+N
Sbjct: 109 PNLEVLN 115


>sp|VHUG_METVO|F420-NON-REDUCING hydrogenase vhu subunit G|Methanococcus voltae

Query: 2 LPNLQVV 8
LPNL++V
Sbjct: 33 LPNLEIV 39


>sp|VHUG_METJA|F420-NON-REDUCING hydrogenase vhu subunit G|Methanocaldococcus jannaschii (strain

Query: 2 LPNLQVV 8
LPNL++V
Sbjct: 34 LPNLEIV 40


>sp|ATGT_SACS2|TRNA-GUANINE(15) transglycosylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LPNLQVVNH 10
+ NLQ+VN+
Sbjct: 100 ITNLQIVNY 108


>sp|RS4E_METBF|SMALL ribosomal subunit protein eS4|Methanosarcina barkeri (strain Fusaro

Query: 1 TLPNLQVVNH 10
+LP+ Q+V H
Sbjct: 156 SLPDKQIVKH 165


>sp|BIOD_METJA|ATP-DEPENDENT dethiobiotin synthetase BioD|Methanocaldococcus jannaschii (strain

Query: 3 PNLQVVNH 10
PNL +NH
Sbjct: 141 PNLGTINH 148


>sp|DPCKG_METTP|GTP-DEPENDENT dephospho-CoA kinase|Methanothrix thermoacetophila (strain DSM

Query: 2 LPNLQVVNH 10
+P+L +V+H
Sbjct: 60 IPDLMIVDH 68




60|Sequence|296|305|QVVNHQQGPH

>sp|CMR3_SACS2|CRISPR system CMR subunit Cmr3|Saccharolobus solfataricus (strain ATCC

Query: 1 QVVNHQ 6
Q++NHQ
Sbjct: 131 QIINHQ 136


>sp|GYRA_HALWD|DNA gyrase subunit A|Haloquadratum walsbyi (strain DSM 16790

Query: 2 VVNHQQGP 9
++NH QGP
Sbjct: 219 LMNHVQGP 226




61|Sequence|301|310|QQGPHHRHIL

>sp|GATD_METKA|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanopyrus kandleri (strain AV19 /

Query: 3 GPHHR 7
GPHHR
Sbjct: 453 GPHHR 457


>sp|VHCG_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit G|Archaeoglobus profundus (strain

Query: 4 PHHRHI 9
PHH H+
Sbjct: 168 PHHDHV 173


>sp|CDC6Q_HALMA|ORC1-TYPE DNA replication protein 17|Haloarcula marismortui (strain ATCC

Query: 4 PHHRHIL 10
PH +H+L
Sbjct: 311 PHSKHVL 317


>sp|LYSY_PYRNV|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 5 HHRHI 9
HHRHI
Sbjct: 209 HHRHI 213


>sp|LYSY_PYRCJ|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 5 HHRHI 9
HHRHI
Sbjct: 208 HHRHI 212


>sp|LYSY_PYRIL|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 5 HHRHI 9
HHRHI
Sbjct: 209 HHRHI 213


>sp|LYSY_PYRAE|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 5 HHRHI 9
HHRHI
Sbjct: 208 HHRHI 212


>sp|GLYA_THEVO|SERINE hydroxymethyltransferase|Thermoplasma volcanium (strain ATCC

Query: 4 PHHRH 8
PHHR+
Sbjct: 54 PHHRY 58


>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 HHRHIL 10
HH HIL
Sbjct: 389 HHEHIL 394


>sp|DTDA_HALLT|D-AMINOACYL-TRNA deacylase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 4 PHHRHIL 10
PH RH++
Sbjct: 216 PHPRHVV 222


>sp|GLYA_THEAC|SERINE hydroxymethyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 4 PHHRH 8
PHHR+
Sbjct: 54 PHHRY 58


>sp|GLYA_PICTO|SERINE hydroxymethyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 4 PHHRH 8
PHHR+
Sbjct: 60 PHHRY 64


>sp|TRPB1_METTH|TRYPTOPHAN synthase beta chain 1|Methanothermobacter thermautotrophicus

Query: 3 GPHHRHIL 10
GP H H++
Sbjct: 307 GPEHAHLM 314


>sp|MFNA_METLZ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanocorpusculum labreanum

Query: 5 HHRHIL 10
HH HIL
Sbjct: 24 HHDHIL 29


>sp|HIS7_METHJ|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 QQGPHH 6
++GPHH
Sbjct: 60 EKGPHH 65




62|Sequence|306|315|HRHILKLLPS

>sp|PURL_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanopyrus kandleri (strain AV19 /

Query: 2 RHILKLLPS 10
RH+L+ LPS
Sbjct: 41 RHLLRQLPS 49


>sp|NARC_HALMT|PROBABLE respiratory nitrate reductase subunit|Haloferax mediterranei

Query: 4 ILKLLPS 10
+LKLLPS
Sbjct: 344 LLKLLPS 350


>sp|PELO_METMP|PROTEIN pelota homolog|Methanococcus maripaludis (strain DSM 14266

Query: 2 RHILKLLP 9
R+I+KL+P
Sbjct: 10 RNIIKLIP 17


>sp|PYRG_METPE|CTP synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 RHILKLLP 9
RH++ +LP
Sbjct: 404 RHVIAILP 411


>sp|PELO_METM6|PROTEIN pelota homolog|Methanococcus maripaludis (strain C6 /

Query: 2 RHILKLLP 9
R+I+KL+P
Sbjct: 10 RNIIKLIP 17




63|Sequence|311|320|KLLPSMEATG

>sp|NADA_HALMA|QUINOLINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 LLPSMEAT 9
+LPSMEA+
Sbjct: 108 ILPSMEAS 115


>sp|NADA_HALSA|QUINOLINATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 LLPSMEAT 9
+LPSMEA+
Sbjct: 108 ILPSMEAS 115


>sp|NADA_HALS3|QUINOLINATE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 LLPSMEAT 9
+LPSMEA+
Sbjct: 108 ILPSMEAS 115


>sp|CETZ_THEKO|TUBULIN-LIKE protein CetZ|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 PSMEATG 10
PS+EATG
Sbjct: 359 PSLEATG 365


>sp|NADA_PYRHO|QUINOLINATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LLPSMEAT 9
L+PS EAT
Sbjct: 75 LIPSREAT 82


>sp|PORA_METBF|PYRUVATE synthase subunit PorA|Methanosarcina barkeri (strain Fusaro /

Query: 1 KLLPSMEATG 10
K LP +EAT
Sbjct: 237 KALPKIEATA 246


>sp|MUTL_METMJ|DNA mismatch repair protein MutL|Methanoculleus marisnigri (strain ATCC

Query: 2 LLPSMEATG 10
LLP+ME G
Sbjct: 394 LLPAMEPIG 402




64|Sequence|316|325|MEATGGEKSS

>sp|CHEB_NATPD|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Natronomonas pharaonis

Query: 2 EATGGEK 8
EATGGE+
Sbjct: 223 EATGGER 229


>sp|PUS10_METTM|TRNA pseudouridine synthase Pus10|Methanothermobacter marburgensis

Query: 1 MEATGGEKS 9
+EATGG S
Sbjct: 211 LEATGGSDS 219


>sp|CYAS_METPE|CYSTEATE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 MEATGGE 7
+EATGGE
Sbjct: 321 LEATGGE 327




65|Sequence|321|330|GEKSSTPIKG

>sp|IORA_METTM|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter marburgensis

Query: 1 GEKSSTPIKG 10
GE+ + P+KG
Sbjct: 187 GERRAEPVKG 196


>sp|SYA_METS3|ALANINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 GEKSSTPIK 9
GEK PIK
Sbjct: 216 GEKEEIPIK 224


>sp|DHYS1_METMA|PROBABLE deoxyhypusine synthase 1|Methanosarcina mazei (strain ATCC

Query: 5 STPIKG 10
STP+KG
Sbjct: 11 STPVKG 16


>sp|Y138_METJA|PUTATIVE glutamine amidotransferase-like protein MJ0138|Methanocaldococcus

Query: 1 GEKSSTPI 8
G KSS PI
Sbjct: 85 GRKSSVPI 92




66|Sequence|326|335|TPIKGPKRGH

>sp|MCRG_METVO|METHYL-COENZYME M reductase subunit gamma|Methanococcus voltae

Query: 2 PIKGPKRGH 10
PI G K GH
Sbjct: 75 PINGAKEGH 83


>sp|DHYS_THEGJ|PROBABLE deoxyhypusine synthase|Thermococcus gammatolerans (strain DSM

Query: 1 TPIKGP 6
TPI+GP
Sbjct: 18 TPIEGP 23


>sp|IF2A_ARCFU|TRANSLATION initiation factor 2 subunit|Archaeoglobus fulgidus (strain ATCC

Query: 6 PKRGH 10
PKRGH
Sbjct: 78 PKRGH 82


>sp|DHYS_THEON|PROBABLE deoxyhypusine synthase|Thermococcus onnurineus (strain NA1)

Query: 1 TPIKGP 6
TPI+GP
Sbjct: 18 TPIEGP 23


>sp|CMR1A_PYRFU|CRISPR system Cmr subunit Cmr1-1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TPIKGPKR 8
TP+ PKR
Sbjct: 77 TPLSSPKR 84


>sp|RS10_ARCFU|SMALL ribosomal subunit protein uS10|Archaeoglobus fulgidus (strain

Query: 2 PIKGPK 7
PIKGPK
Sbjct: 2 PIKGPK 7


>sp|NADK_HALSA|NAD kinase|Halobacterium salinarum (strain ATCC 700922

Query: 3 IKGPKRGH 10
I+G +RGH
Sbjct: 144 IQGEQRGH 151


>sp|NADK_HALS3|NAD kinase|Halobacterium salinarum (strain ATCC 29341

Query: 3 IKGPKRGH 10
I+G +RGH
Sbjct: 144 IQGEQRGH 151




67|Sequence|331|340|PKRGHPRQNL

>sp|PYRDB_METMA|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanosarcina mazei (strain

Query: 1 PKRGHPRQNL 10
PK GHP ++
Sbjct: 61 PKTGHPNPSM 70


>sp|HEM1_METB6|GLUTAMYL-TRNA reductase|Methanoregula boonei (strain DSM 21154

Query: 1 PKRGHPR 7
P GHPR
Sbjct: 261 PVEGHPR 267


>sp|IF2A_ARCFU|TRANSLATION initiation factor 2 subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 PKRGH 5
PKRGH
Sbjct: 78 PKRGH 82


>sp|PSLS_METTH|PHOSPHOSULFOLACTATE synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 PKRGHPRQN 9
P+ G PR+N
Sbjct: 10 PRSGKPRKN 18


>sp|ILVB_METAO|PROBABLE acetolactate synthase large subunit|Methanococcus aeolicus

Query: 4 GHPRQ 8
GHPRQ
Sbjct: 188 GHPRQ 192


>sp|PYRDA_AERPE|PUTATIVE dihydroorotate dehydrogenase A (fumarate)|Aeropyrum pernix

Query: 1 PKRGHPRQNL 10
P++G+P+ +L
Sbjct: 54 PRKGYPQPHL 63


>sp|FWDB_METMP|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanococcus

Query: 3 RGHPRQN 9
RG+PR N
Sbjct: 317 RGYPRYN 323


>sp|FWDB_METJA|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanocaldococcus

Query: 3 RGHPRQN 9
RG+PR N
Sbjct: 318 RGYPRYN 324


>sp|COFG_ARCFU|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PKRGHPRQN 9
PK+G P +N
Sbjct: 200 PKKGTPMEN 208


>sp|RNP3_METKA|RIBONUCLEASE P protein component 3|Methanopyrus kandleri (strain AV19 /

Query: 1 PKRGHPRQNL 10
P+RG+P L
Sbjct: 121 PERGNPHAGL 130




68|Sequence|336|345|PRQNLHKHFD

>sp|ADEC_METTP|ADENINE deaminase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PRQNLHKHFD 10
PR +H+H D
Sbjct: 271 PRDIVHRHID 280


>sp|SYM_METMA|METHIONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 6 HKHFD 10
HKHFD
Sbjct: 83 HKHFD 87


>sp|SYM_METAC|METHIONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 6 HKHFD 10
HKHFD
Sbjct: 83 HKHFD 87


>sp|SYG_THESM|GLYCINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 1 PRQNLHKHFD 10
P+Q H HF+
Sbjct: 223 PKQKEHPHFE 232


>sp|SYM_METBF|METHIONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 6 HKHFD 10
HKHFD
Sbjct: 79 HKHFD 83


>sp|FPOL_METMA|F(420)H(2) dehydrogenase subunit L|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PRQNLHKH 8
PR N H H
Sbjct: 473 PRSNYHGH 480


>sp|SYM_METBU|METHIONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 6 HKHFD 10
HKHFD
Sbjct: 80 HKHFD 84


>sp|GLMS_HALSA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Halobacterium salinarum (strain

Query: 2 RQNLHKHFD 10
R+N H H D
Sbjct: 79 RENAHPHTD 87


>sp|RSMA_METKA|PROBABLE ribosomal RNA small subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 PRQNLHKHF 9
PR+ L +HF
Sbjct: 18 PRRRLGQHF 26


>sp|GLMS_METMP|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanococcus maripaludis (strain

Query: 2 RQNLHKHFD 10
+ N H H+D
Sbjct: 81 KNNAHPHYD 89


>sp|TOP1_METTH|DNA topoisomerase 1|Methanothermobacter thermautotrophicus (strain

Query: 1 PRQNLHKHF 9
PRQ+ +HF
Sbjct: 65 PRQSNEEHF 73


>sp|LIVG_ARCFU|PROBABLE branched-chain amino acid transport|Archaeoglobus fulgidus

Query: 3 QNLHKHFD 10
QNL K FD
Sbjct: 7 QNLSKFFD 14


>sp|RFCL_NATPD|REPLICATION factor C large subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 4 NLHKHFD 10
NLH+H D
Sbjct: 106 NLHQHKD 112


>sp|GLMS_METKA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanopyrus kandleri (strain AV19

Query: 2 RQNLHKHFD 10
R+N H H D
Sbjct: 86 RRNAHPHTD 94


>sp|Y888_METJA|PROBABLE metallo-hydrolase MJ0888|Methanocaldococcus jannaschii (strain

Query: 4 NLHKHFD 10
N H HFD
Sbjct: 53 NTHCHFD 59




69|Sequence|341|350|HKHFDINEHL

>sp|Y993_METJA|PUTATIVE hydrogenase expression/formation protein MJ0993|Methanocaldococcus

Query: 1 HKHFDINEH 9
+K FDI EH
Sbjct: 288 YKKFDIYEH 296


>sp|MBD_THEAC|MEVALONATE 3,5-bisphosphate decarboxylase|Thermoplasma acidophilum (strain

Query: 3 HFDINEHL 10
HFDIN+ L
Sbjct: 287 HFDINDLL 294


>sp|Y1334_METJA|PUTATIVE UTP--glucose-1-phosphate uridylyltransferase|Methanocaldococcus

Query: 3 HFDINEHL 10
HFD+N L
Sbjct: 65 HFDVNYEL 72


>sp|GCH3_NATPD|GTP cyclohydrolase III|Natronomonas pharaonis (strain ATCC 35678

Query: 3 HFDINE 8
HFD+N+
Sbjct: 141 HFDVND 146


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 1 HKHFDINEHL 10
H FD NE L
Sbjct: 4 HSLFDYNERL 13


>sp|TRPB2_METAC|TRYPTOPHAN synthase beta chain 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 HKHFDINEH 9
H HFD++ +
Sbjct: 425 HGHFDMSSY 433


>sp|MCH_METTM|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanothermobacter marburgensis (strain ATCC

Query: 3 HFDINE 8
HFD+N+
Sbjct: 199 HFDVNK 204


>sp|MCH_METTH|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 HFDINE 8
HFD+N+
Sbjct: 199 HFDVNK 204


>sp|MCH_META3|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 HFDINE 8
HFD+N+
Sbjct: 199 HFDVNK 204




70|Sequence|346|355|INEHLPWMIV

>sp|AATI_THEKO|A-TYPE ATP synthase subunit I|Thermococcus kodakarensis (strain ATCC

Query: 3 EHLPWMIV 10
E LPWMI+
Sbjct: 501 EQLPWMII 508


>sp|URAD_HALVD|2-OXO-4-HYDROXY-4-CARBOXY-5-UREIDOIMIDAZOLINE decarboxylase|Haloferax volcanii (strain ATCC 29605

Query: 1 INEHLPWM 8
I EH PW+
Sbjct: 24 IYEHSPWV 31


>sp|RFCL_STAMF|REPLICATION factor C large subunit|Staphylothermus marinus (strain ATCC 43588

Query: 1 INEHLP 6
INEH+P
Sbjct: 268 INEHIP 273


>sp|THIN_METTH|THIAMINE-PHOSPHATE synthase ThiN|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 INEHLP 6
+NEHLP
Sbjct: 81 LNEHLP 86


>sp|ATGT_AERPE|TRNA-GUANINE(15) transglycosylase|Aeropyrum pernix (strain ATCC 700893

Query: 3 EHLPW 7
+HLPW
Sbjct: 211 KHLPW 215


>sp|MVK_THEON|MEVALONATE kinase|Thermococcus onnurineus (strain NA1)

Query: 3 EHLPWM 8
EHLP+M
Sbjct: 179 EHLPFM 184


>sp|MVK_THEKO|MEVALONATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 EHLPWM 8
EHLP+M
Sbjct: 182 EHLPFM 187


>sp|MVK_PYRFU|MEVALONATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 EHLPWM 8
EHLP+M
Sbjct: 179 EHLPFM 184


>sp|SYI_PICTO|ISOLEUCINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 NEHLPW 7
NE LPW
Sbjct: 352 NEKLPW 357


>sp|AATI_PYRAB|A-TYPE ATP synthase subunit I|Pyrococcus abyssi (strain GE5 /

Query: 1 INEHLPWMIV 10
I E LPW+ +
Sbjct: 491 ILEQLPWVFI 500


>sp|RPO5_METS5|DNA-DIRECTED RNA polymerase subunit Rpo5|Metallosphaera sedula (strain ATCC

Query: 3 EHLPWM 8
E LPWM
Sbjct: 39 EQLPWM 44


>sp|NIKR3_METMA|PUTATIVE nickel-responsive regulator 3|Methanosarcina mazei (strain ATCC

Query: 2 NEHLPWM 8
N+H WM
Sbjct: 44 NQHYEWM 50


>sp|NIKR2_METAC|PUTATIVE nickel-responsive regulator 2|Methanosarcina acetivorans (strain

Query: 2 NEHLPWM 8
N+H WM
Sbjct: 44 NQHYEWM 50


>sp|CYAS_METMJ|CYSTEATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 NEHLPWMI 9
N H PW +
Sbjct: 305 NRHPPWEV 312


>sp|SYFB_METST|PHENYLALANINE--TRNA ligase beta subunit|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 EHLPWMI 9
EHL W+I
Sbjct: 122 EHLHWVI 128


>sp|SYFB_METKA|PHENYLALANINE--TRNA ligase beta subunit|Methanopyrus kandleri (strain AV19 /

Query: 3 EHLPWMI 9
EHL W+I
Sbjct: 126 EHLHWVI 132




71|Sequence|351|360|PWMIVLFLLL

>sp|RL15E_STAMF|LARGE ribosomal subunit protein eL15|Staphylothermus marinus (strain ATCC

Query: 1 PWMIVL 6
PW IVL
Sbjct: 210 PWQIVL 215




72|Sequence|356|365|LFLLLVLVVI

***** No hits found ******


73|Sequence|361|370|VLVVIVVCSI

>sp|Y226_ARCFU|PUTATIVE NADH dehydrogenase/NAD(P)H nitroreductase AF_0226|Archaeoglobus

Query: 3 VVIVVCS 9
VVIVVC+
Sbjct: 74 VVIVVCA 80




74|Sequence|366|375|VVCSIRKSSR

***** No hits found ******


75|Sequence|371|380|RKSSRTLKKG

>sp|MDH_METAC|MALATE dehydrogenase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 RKSSRTLKKG 10
RKSS T+K+G
Sbjct: 292 RKSSETIKRG 301


>sp|MDH_METMA|MALATE dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RKSSRTLKKG 10
+KSS T++KG
Sbjct: 292 KKSSETIRKG 301


>sp|Y1808_PYRHO|PUTATIVE HTH-type transcriptional regulatory protein|Pyrococcus horikoshii

Query: 1 RKSSRTLKKG 10
RK+ RTLK+
Sbjct: 249 RKTGRTLKRA 258




76|Sequence|376|385|TLKKGPRQDP

>sp|MCRA_METBF|METHYL-COENZYME M reductase subunit alpha|Methanosarcina barkeri (strain Fusaro /

Query: 2 LKKGPRQDP 10
L+ GP QDP
Sbjct: 39 LRLGPEQDP 47


>sp|DNLI_CENSY|DNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 TLKKGPRQD 9
TLK+ PR D
Sbjct: 496 TLKRNPRID 504




77|Sequence|381|390|PRQDPSAIVE

>sp|PXPA_THEKO|5-OXOPROLINASE subunit A|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PRQDPSAIVE 10
PR P A++E
Sbjct: 178 PRSKPGAVIE 187


>sp|PXPA_PYRFU|5-OXOPROLINASE subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PRQDPSAIVE 10
PR P A++E
Sbjct: 178 PRSRPGAVIE 187


>sp|RS2_METTH|SMALL ribosomal subunit protein uS2|Methanothermobacter

Query: 1 PRQDPSAIVE 10
PR D AI+E
Sbjct: 119 PRSDSQAIIE 128


>sp|PXPA_PYRAB|5-OXOPROLINASE subunit A|Pyrococcus abyssi (strain GE5 /

Query: 1 PRQDPSAIVE 10
PR P A++E
Sbjct: 178 PRGKPGAVIE 187


>sp|PYRH_METBU|URIDYLATE kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PRQDPSA 7
PR+DP+A
Sbjct: 149 PREDPNA 155


>sp|DNLI2_HALWD|DNA ligase 2|Haloquadratum walsbyi (strain DSM 16790

Query: 4 DPSAIVE 10
DPSA+VE
Sbjct: 248 DPSAVVE 254


>sp|PYRH_METHJ|URIDYLATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PRQDPSA 7
PR+DP+A
Sbjct: 150 PRKDPAA 156


>sp|RS2_AERPE|SMALL ribosomal subunit protein uS2|Aeropyrum pernix (strain ATCC 700893

Query: 1 PRQDPSAIVE 10
PR D A+VE
Sbjct: 123 PRMDRQAVVE 132


>sp|RS2_METST|SMALL ribosomal subunit protein uS2|Methanosphaera stadtmanae (strain

Query: 1 PRQDPSAIVE 10
PR D A++E
Sbjct: 119 PRSDSQAVIE 128


>sp|PXPA_PYRHO|5-OXOPROLINASE subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PRQDPSAIVE 10
PR P A++E
Sbjct: 178 PRGRPGAVIE 187


>sp|FTTA_METMP|TRANSCRIPTION termination factor FttA|Methanococcus maripaludis (strain DSM

Query: 2 RQDPSAIVE 10
R DPS +VE
Sbjct: 63 RPDPSVLVE 71


>sp|GGGPS_METMP|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 QDPSAIVE 10
+DP A+VE
Sbjct: 230 KDPQAVVE 237


>sp|BAT_HALSA|BACTERIOOPSIN transcriptional activator|Halobacterium salinarum (strain ATCC

Query: 1 PRQDPSAIVE 10
P DP A+V+
Sbjct: 504 PHDDPQAVVD 513


>sp|FTTA_METJA|TRANSCRIPTION termination factor FttA|Methanocaldococcus jannaschii (strain

Query: 2 RQDPSAIVE 10
R DPS +VE
Sbjct: 63 RPDPSVLVE 71


>sp|UBIX_AERPE|FLAVIN prenyltransferase UbiX|Aeropyrum pernix (strain ATCC 700893

Query: 1 PRQDPSAIVE 10
PR+ P +VE
Sbjct: 128 PRETPLGVVE 137




78|Sequence|386|395|SAIVEKAGLK

>sp|PURL_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 AIVEKAGLK 10
+IV+KAGLK
Sbjct: 186 SIVDKAGLK 194


>sp|PURL_SACI7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 AIVEKAGLK 10
+IV+KAGLK
Sbjct: 186 SIVDKAGLK 194


>sp|PURL_SACI6|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.4 /

Query: 2 AIVEKAGLK 10
+IV+KAGLK
Sbjct: 186 SIVDKAGLK 194


>sp|PURL_SACI4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.14.25 /

Query: 2 AIVEKAGLK 10
+IV+KAGLK
Sbjct: 186 SIVDKAGLK 194


>sp|PURL_SACI3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.27)

Query: 2 AIVEKAGLK 10
+IV+KAGLK
Sbjct: 186 SIVDKAGLK 194


>sp|PURL_SACI2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 AIVEKAGLK 10
+IV+KAGLK
Sbjct: 186 SIVDKAGLK 194


>sp|PURL_SACI1|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 AIVEKAGLK 10
+IV+KAGLK
Sbjct: 186 SIVDKAGLK 194


>sp|HIS1_METM5|ATP phosphoribosyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 SAIVEKAGLK 10
+ I+EKAGLK
Sbjct: 17 NEILEKAGLK 26


>sp|HIS1_METM7|ATP phosphoribosyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 SAIVEKAGLK 10
+ I+EKAGLK
Sbjct: 17 NEILEKAGLK 26


>sp|HIS1_METJA|ATP phosphoribosyltransferase|Methanocaldococcus jannaschii (strain

Query: 3 IVEKAGLK 10
++EKAGLK
Sbjct: 19 VLEKAGLK 26


>sp|CAPPA_PYRAB|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus abyssi (strain GE5 /

Query: 3 IVEKAGLK 10
+ EKAGLK
Sbjct: 420 VAEKAGLK 427


>sp|IF2P_METBU|PROBABLE translation initiation factor IF-2|Methanococcoides burtonii

Query: 1 SAIVEKAG 8
SAIVEK G
Sbjct: 54 SAIVEKCG 61


>sp|DTDA_METAC|D-AMINOACYL-TRNA deacylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SAIVEKAGLK 10
S I+EK GLK
Sbjct: 273 SQILEKLGLK 282


>sp|CAS6L_PYRFU|PUTATIVE CRISPR-associated endoribonuclease-like protein Cas6|Pyrococcus

Query: 1 SAIVEKAG 8
S IVEKAG
Sbjct: 26 SQIVEKAG 33


>sp|THII_METJA|PROBABLE tRNA sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 SAIVEKAGL 9
AIVEK GL
Sbjct: 142 EAIVEKLGL 150


>sp|HIS1_METM6|ATP phosphoribosyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 SAIVEKAGLK 10
+ I+EK+GLK
Sbjct: 17 NEILEKSGLK 26


>sp|HIS1_METMP|ATP phosphoribosyltransferase|Methanococcus maripaludis (strain DSM

Query: 1 SAIVEKAGLK 10
+ I+EK+GLK
Sbjct: 17 NEILEKSGLK 26


>sp|G3P_THEON|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus onnurineus (strain NA1)

Query: 2 AIVEKAGLK 10
A+ EKAG+K
Sbjct: 97 AVYEKAGVK 105


>sp|GUAAB_THEKO|GMP synthase [glutamine-hydrolyzing] subunit B|Thermococcus

Query: 4 VEKAGLK 10
+EKAGLK
Sbjct: 219 IEKAGLK 225


>sp|HIS1_META3|ATP phosphoribosyltransferase|Methanococcus aeolicus (strain ATCC

Query: 3 IVEKAGLK 10
I++KAGLK
Sbjct: 19 ILDKAGLK 26


>sp|TTDB_METJA|PUTATIVE L(+)-tartrate dehydratase subunit beta|Methanocaldococcus

Query: 1 SAIVEKAGLK 10
SAIV K G+K
Sbjct: 99 SAIVGKGGMK 108


>sp|SYP_METVS|PROLINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 SAIVEKAGL 9
S I+EKAG+
Sbjct: 8 SEILEKAGI 16


>sp|HUTH_THEAC|PROBABLE histidine ammonia-lyase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 VEKAGLK 10
+EKAGLK
Sbjct: 174 LEKAGLK 180


>sp|G3P_THEKO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 AIVEKAGLK 10
A+ EKAG+K
Sbjct: 97 ALYEKAGVK 105




79|Sequence|391|400|KAGLKKSMTP

>sp|XERA_METTH|TYROSINE recombinase XerA|Methanothermobacter thermautotrophicus (strain

Query: 1 KAGLKKSMTP 10
KAG+KK +TP
Sbjct: 248 KAGIKKKVTP 257


>sp|SYH_METS5|HISTIDINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 KAGLKKSMTP 10
KAG K++MTP
Sbjct: 34 KAGYKEAMTP 43


>sp|RL30_META3|LARGE ribosomal subunit protein uL30|Methanococcus aeolicus (strain ATCC

Query: 1 KAGLKKSMT 9
KAG+KKS T
Sbjct: 126 KAGIKKSFT 134


>sp|CAS1_NANEQ|CRISPR-ASSOCIATED endonuclease Cas1|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 KAGLKKSM 8
K+GLK+SM
Sbjct: 298 KSGLKRSM 305


>sp|LONB_ARCFU|ARCHAEAL Lon protease|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KAGLKKSMTP 10
+AGLKK + P
Sbjct: 558 QAGLKKVIIP 567




80|Sequence|396|405|KSMTPTQNRE

>sp|Y1143_METST|PUTATIVE HTH-type transcriptional regulatory protein|Methanosphaera

Query: 2 SMTPTQNRE 10
S+TPTQ E
Sbjct: 56 SLTPTQAEE 64




81|Sequence|401|410|TQNREKWIYY

>sp|RNP3_METKA|RIBONUCLEASE P protein component 3|Methanopyrus kandleri (strain AV19 /

Query: 4 REKWIY 9
REKW Y
Sbjct: 139 REKWTY 144


>sp|TIAS_CALMQ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Caldivirga maquilingensis

Query: 3 NREKWIYY 10
N E WIY+
Sbjct: 101 NNEHWIYW 108


>sp|PHSG_THELN|MALTODEXTRIN phosphorylase|Thermococcus litoralis (strain ATCC 51850

Query: 2 QNREKWIY 9
+NR +WIY
Sbjct: 654 ENRARWIY 661


>sp|Y1553_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ1553|Methanocaldococcus

Query: 2 QNREKWIYY 10
+N KW+YY
Sbjct: 53 ENYSKWVYY 61


>sp|Y249_METTH|UNCHARACTERIZED protein MTH_249|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 TQNREKWIYY 10
++ +E W YY
Sbjct: 135 SKTKEPWKYY 144


>sp|SYK_ARCFU|LYSINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 EKWIYY 10
E WIYY
Sbjct: 185 ENWIYY 190


>sp|Y1561_METJA|UNCHARACTERIZED protein MJ1561|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TQNREKWIYY 10
T+ +EK IYY
Sbjct: 204 TKTQEKTIYY 213


>sp|Y22A_METJA|UNCHARACTERIZED protein MJ0226.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QNREKWIY 9
NR +WI+
Sbjct: 57 MNRSRWIF 64




82|Sequence|406|415|KWIYYCNGHG

>sp|Y665_METJA|UNCHARACTERIZED protein MJ0665|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 YCNGH 9
YCNGH
Sbjct: 200 YCNGH 204


>sp|GSA_NITMS|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 KWIYYCNGHG 10
K I +CNG+G
Sbjct: 47 KLIDFCNGYG 56


>sp|VAPC1_THEAC|RIBONUCLEASE VapC1|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 WIYYCNG 8
WIY C G
Sbjct: 155 WIYRCTG 161


>sp|PUS10_ARCFU|TRNA pseudouridine synthase Pus10|Archaeoglobus fulgidus (strain ATCC

Query: 1 KWIY-YCNGHG 10
+W+ YCNG G
Sbjct: 136 RWLCGYCNGEG 146


>sp|GSA_THEVO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KWIYYCNGHG 10
K+I YC G+G
Sbjct: 47 KYIDYCLGYG 56


>sp|Y961_METJA|MCM-LIKE protein MJ0961|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KWIYYCN 7
K +YYCN
Sbjct: 132 KAVYYCN 138


>sp|AHBC_METBF|FE-COPROPORPHYRIN III synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 KWIYYCNGH 9
KW+ CNG+
Sbjct: 360 KWLDVCNGN 368


>sp|NOB1_PYRAB|ENDORIBONUCLEASE Nob1|Pyrococcus abyssi (strain GE5 /

Query: 1 KWIYYCNGHG 10
KW Y C G G
Sbjct: 124 KWQYVCIGCG 133


>sp|NOB1_PYRHO|ENDORIBONUCLEASE Nob1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KWIYYCNGHG 10
KW Y C G G
Sbjct: 126 KWRYVCIGCG 135


>sp|NOB1_ARCFU|ENDORIBONUCLEASE Nob1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KWIYYCNGHG 10
KW+ C G G
Sbjct: 128 KWVKVCRGCG 137


>sp|NIKR_METM7|PUTATIVE nickel-responsive regulator|Methanococcus maripaludis (strain C7

Query: 1 KWIYYCNGH 9
KWI+ GH
Sbjct: 47 KWIHSLEGH 55


>sp|KTHY_METST|PROBABLE thymidylate kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 KWIYYCNGH 9
+WIY N H
Sbjct: 111 EWIYKINKH 119


>sp|Y1553_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ1553|Methanocaldococcus

Query: 1 KWIYY 5
KW+YY
Sbjct: 57 KWVYY 61


>sp|KCY_THEAC|CYTIDYLATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 WIYYCNG 8
WI Y NG
Sbjct: 86 WISYLNG 92


>sp|DNLI_NITMS|DNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 IYYCNG 8
I YCNG
Sbjct: 344 ILYCNG 349


>sp|Y3503_METJA|UNCHARACTERIZED protein MJECL03|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KWIYYCN 7
KWI CN
Sbjct: 95 KWIIKCN 101


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 IYYCN 7
+YYCN
Sbjct: 703 LYYCN 707


>sp|CYNS_SULTO|CYANATE hydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KWIYY 5
KW+YY
Sbjct: 141 KWLYY 145


>sp|GSA1_CENSY|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase 1|Cenarchaeum symbiosum (strain A)

Query: 1 KWIYYCNGHG 10
K+ CNG+G
Sbjct: 47 KYTDLCNGYG 56


>sp|RF1_METTH|PEPTIDE chain release factor subunit|Methanothermobacter thermautotrophicus

Query: 2 WIYYCN 7
+IY+CN
Sbjct: 119 YIYHCN 124


>sp|GSA_METST|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 KWIYYCNGHG 10
++I YC G+G
Sbjct: 50 EYIDYCLGYG 59


>sp|RUBY_METJA|PUTATIVE rubrerythrin|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KWIYY 5
KW+YY
Sbjct: 62 KWLYY 66


>sp|SPEH_AERPE|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Aeropyrum pernix (strain ATCC 700893

Query: 3 IYYCNGH 9
+Y C GH
Sbjct: 95 VYSCGGH 101


>sp|METE_THEVO|METHIONINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KWIYYCNG 8
KW Y NG
Sbjct: 164 KWPYISNG 171


>sp|MTIP_METKA|PROBABLE S-methyl-5'-thioinosine phosphorylase|Methanopyrus kandleri

Query: 3 IYYCNGHG 10
+Y+ N HG
Sbjct: 42 VYFINRHG 49


>sp|Y878_METJA|UNCHARACTERIZED lipoprotein MJ0878|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IYYCNGH 9
++YCNG
Sbjct: 294 MFYCNGD 300


>sp|Y1403_METJA|UNCHARACTERIZED protein MJ1403|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WIYYCNGHG 10
W+ Y NG+G
Sbjct: 102 WLGYPNGNG 110


>sp|AGLU_SACS9|ALPHA-GLUCOSIDASE solfataricus (strain 98/2) (Sulfolobus

Query: 1 KWIYYCNG 8
KW Y NG
Sbjct: 576 KWYNYWNG 583


>sp|AGLU_SACS2|ALPHA-GLUCOSIDASE solfataricus (strain ATCC 35092

Query: 1 KWIYYCNG 8
KW Y NG
Sbjct: 576 KWYNYWNG 583


>sp|OFOB2_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit beta|Aeropyrum pernix (strain ATCC

Query: 2 WIYYCNGHG 10
W+ +C G G
Sbjct: 13 WVQWCPGCG 21




83|Sequence|411|420|CNGHGIDILK

>sp|RPO3_PICTO|DNA-DIRECTED RNA polymerase subunit Rpo3|Picrophilus torridus (strain ATCC

Query: 1 CNGHGIDI 8
CNG G D+
Sbjct: 92 CNGEGCDL 99


>sp|DNAK_HALLT|CHAPERONE protein DnaK|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 NGHGIDI 8
N HGID+
Sbjct: 220 NNHGIDL 226


>sp|PSB_METMS|PROTEASOME subunit beta|Methanohalophilus mahii (strain ATCC 35705

Query: 2 NGHGIDILK 10
+G+GID++K
Sbjct: 180 SGNGIDVVK 188


>sp|RF1_METM7|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C7 /

Query: 1 CNGHGIDIL 9
CN H DI+
Sbjct: 384 CNVHNTDII 392


>sp|RF1_METM6|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C6 /

Query: 1 CNGHGIDIL 9
CN H DI+
Sbjct: 384 CNVHNTDII 392


>sp|ILVD_METS5|DIHYDROXY-ACID dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 2 NGHGID 7
NGHG D
Sbjct: 110 NGHGYD 115


>sp|DNAK_HALMT|CHAPERONE protein DnaK|Haloferax mediterranei (strain ATCC 33500

Query: 2 NGHGIDI 8
N HGID+
Sbjct: 220 NDHGIDL 226


>sp|ILVD_PYRIL|DIHYDROXY-ACID dehydratase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 NGHGID 7
N HGID
Sbjct: 111 NAHGID 116


>sp|Y1607_METJA|UNCHARACTERIZED glycosyltransferase MJ1607|Methanocaldococcus jannaschii (strain

Query: 2 NGHGIDIL 9
NGH +D++
Sbjct: 32 NGHEVDVI 39


>sp|PRIS_METMP|DNA primase small subunit PriS|Methanococcus maripaludis (strain DSM

Query: 3 GHGID 7
GHGID
Sbjct: 348 GHGID 352


>sp|PRIS_METM7|DNA primase small subunit PriS|Methanococcus maripaludis (strain C7 /

Query: 3 GHGID 7
GHGID
Sbjct: 354 GHGID 358


>sp|PRIS_METM6|DNA primase small subunit PriS|Methanococcus maripaludis (strain C6 /

Query: 3 GHGID 7
GHGID
Sbjct: 348 GHGID 352


>sp|PRIS_METM5|DNA primase small subunit PriS|Methanococcus maripaludis (strain C5 /

Query: 3 GHGID 7
GHGID
Sbjct: 348 GHGID 352


>sp|DPOL1_METTH|DNA polymerase PolB subunit 1|Methanothermobacter thermautotrophicus

Query: 3 GHGIDIL 9
HG+DIL
Sbjct: 166 AHGLDIL 172


>sp|PSB_FERPA|PROTEASOME subunit beta|Ferroglobus placidus (strain DSM 10642

Query: 2 NGHGIDILK 10
+G GID++K
Sbjct: 180 SGDGIDVVK 188


>sp|PSB_ARCPA|PROTEASOME subunit beta|Archaeoglobus profundus (strain DSM 5631

Query: 2 NGHGIDILK 10
+G GID++K
Sbjct: 183 SGDGIDVVK 191


>sp|PSB_ARCFU|PROTEASOME subunit beta|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NGHGIDILK 10
+G GID++K
Sbjct: 182 SGDGIDVVK 190


>sp|PSB2_METS5|PROTEASOME subunit beta 2|Metallosphaera sedula (strain ATCC 51363

Query: 2 NGHGIDIL 9
+G GIDIL
Sbjct: 174 SGDGIDIL 181


>sp|PSB1_SULTO|PROTEASOME subunit beta 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 NGHGIDIL 9
+G GIDIL
Sbjct: 174 SGDGIDIL 181


>sp|PSB1_SULAC|PROTEASOME subunit beta 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 NGHGIDIL 9
+G GIDIL
Sbjct: 174 SGDGIDIL 181


>sp|PGP_METS3|PHOSPHOGLYCOLATE phosphatase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 CNGHGIDI 8
CN +GID+
Sbjct: 170 CNENGIDM 177


>sp|GGGPS_METHJ|GERANYLGERANYLGLYCERYL phosphate synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 HGIDIL 9
HGID+L
Sbjct: 76 HGIDLL 81


>sp|TFE_METBF|TRANSCRIPTION factor E|Methanosarcina barkeri (strain Fusaro /

Query: 2 NGHGIDILK 10
N H ID+L+
Sbjct: 147 NSHFIDVLR 155


>sp|AROE_HALMA|SHIKIMATE dehydrogenase (NADP(+))|Haloarcula marismortui (strain ATCC 43049

Query: 2 NGHGIDIL 9
+GHG+D L
Sbjct: 163 SGHGLDSL 170


>sp|DNAK_HALSA|CHAPERONE protein DnaK|Halobacterium salinarum (strain ATCC 700922

Query: 2 NGHGIDI 8
N HGID+
Sbjct: 219 NEHGIDL 225


>sp|DNAK_HALS3|CHAPERONE protein DnaK|Halobacterium salinarum (strain ATCC 29341

Query: 2 NGHGIDI 8
N HGID+
Sbjct: 219 NEHGIDL 225


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 NGHGIDIL 9
N HG+D++
Sbjct: 285 NRHGLDVI 292


>sp|PSB1_STAMF|PROTEASOME subunit beta 1|Staphylothermus marinus (strain ATCC 43588

Query: 2 NGHGIDILK 10
+G G+D+L+
Sbjct: 187 SGDGVDVLR 195


>sp|FSR_METJA|COENZYME F420-dependent sulfite reductase|Methanocaldococcus jannaschii

Query: 4 HGIDILK 10
HGIDI K
Sbjct: 217 HGIDIEK 223




84|Sequence|416|425|IDILKLVAAQ

>sp|Y1534_PYRCJ|UPF0284 protein Pcal_1534|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 DILKLVAAQ 10
D+LKLV A+
Sbjct: 316 DVLKLVEAE 324




85|Sequence|421|430|LVAAQVGSQW

>sp|IF2G_THEON|TRANSLATION initiation factor 2 subunit|Thermococcus onnurineus (strain NA1)

Query: 2 VAAQVGSQW 10
++ QVGS+W
Sbjct: 392 ISRQVGSRW 400


>sp|IF2G_THEKO|TRANSLATION initiation factor 2 subunit|Thermococcus kodakarensis (strain ATCC

Query: 2 VAAQVGSQW 10
++ QVGS+W
Sbjct: 392 ISRQVGSRW 400


>sp|IF2G_PYRHO|TRANSLATION initiation factor 2 subunit|Pyrococcus horikoshii (strain ATCC

Query: 2 VAAQVGSQW 10
++ Q+GS+W
Sbjct: 393 ISRQIGSRW 401


>sp|IF2G_PYRFU|TRANSLATION initiation factor 2 subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VAAQVGSQW 10
++ Q+GS+W
Sbjct: 393 ISRQIGSRW 401


>sp|IF2G_PYRAB|TRANSLATION initiation factor 2 subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 VAAQVGSQW 10
++ Q+GS+W
Sbjct: 393 ISRQIGSRW 401


>sp|SYM_METAC|METHIONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 AAQVGSQW 10
AAQ G W
Sbjct: 274 AAQAGDSW 281


>sp|SYM_METMA|METHIONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 AAQVGSQW 10
AAQ G W
Sbjct: 274 AAQAGDSW 281


>sp|IF2G_METJA|TRANSLATION initiation factor 2 subunit|Methanocaldococcus jannaschii (strain

Query: 2 VAAQVGSQW 10
++ +VGS+W
Sbjct: 393 ISRRVGSRW 401


>sp|IF2G_ARCFU|TRANSLATION initiation factor 2 subunit|Archaeoglobus fulgidus (strain ATCC

Query: 2 VAAQVGSQW 10
++ +VGS+W
Sbjct: 407 ISRRVGSRW 415


>sp|KORA_METJA|2-OXOGLUTARATE synthase subunit KorA|Methanocaldococcus jannaschii (strain ATCC

Query: 2 VAAQVGSQW 10
+AA +G+ W
Sbjct: 60 IAAVIGASW 68


>sp|LYSW_SULAC|ALPHA-AMINOADIPATE/GLUTAMATE carrier protein LysW|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 VAAQVGSQW 10
+A QVG W
Sbjct: 46 LAEQVGEDW 54


>sp|LYSW_SULTO|ALPHA-AMINOADIPATE/GLUTAMATE carrier protein LysW|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VAAQVGSQW 10
+A QVG W
Sbjct: 46 LAEQVGEDW 54


>sp|AATA_METST|A-TYPE ATP synthase subunit A|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 AQVGSQW 10
+Q+GS W
Sbjct: 447 SQIGSDW 453


>sp|DABA_NATPD|PROBABLE inorganic carbon transporter subunit|Natronomonas pharaonis

Query: 2 VAAQVGSQW 10
VA +VGS W
Sbjct: 19 VADRVGSVW 27




86|Sequence|426|435|VGSQWKDIYQ

>sp|G3P_SACI7|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 VGSQWKDIYQ 10
VG+Q+K IYQ
Sbjct: 89 VGAQYKPIYQ 98


>sp|G3P_SACI6|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 VGSQWKDIYQ 10
VG+Q+K IYQ
Sbjct: 89 VGAQYKPIYQ 98


>sp|G3P_SACI4|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 VGSQWKDIYQ 10
VG+Q+K IYQ
Sbjct: 89 VGAQYKPIYQ 98


>sp|G3P_SACI3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus islandicus (strain M.16.27)

Query: 1 VGSQWKDIYQ 10
VG+Q+K IYQ
Sbjct: 89 VGAQYKPIYQ 98


>sp|G3P_SACI2|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 VGSQWKDIYQ 10
VG+Q+K IYQ
Sbjct: 89 VGAQYKPIYQ 98


>sp|G3P_SACI1|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 VGSQWKDIYQ 10
VG+Q+K IYQ
Sbjct: 89 VGAQYKPIYQ 98


>sp|Y1451_METJA|UNCHARACTERIZED protein MJ1451|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VGSQWKDI 8
VGS+W D+
Sbjct: 216 VGSKWTDV 223


>sp|G3P_SULAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VGSQWKDIYQ 10
VG+ +K IYQ
Sbjct: 91 VGANYKKIYQ 100


>sp|G3P_SACS2|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VGSQWKDIY 9
VG+Q+K IY
Sbjct: 89 VGAQYKPIY 97


>sp|G3P_METS5|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Metallosphaera sedula (strain ATCC 51363

Query: 1 VGSQWKDIY 9
VG+Q+K +Y
Sbjct: 89 VGAQYKQVY 97


>sp|ADEC_STAMF|ADENINE deaminase|Staphylothermus marinus (strain ATCC 43588

Query: 2 GSQWKDI 8
GS WKD+
Sbjct: 265 GSAWKDL 271


>sp|MRE11_HALVD|DNA double-strand break repair protein|Haloferax volcanii (strain

Query: 2 GSQWKDIYQ 10
G QW D+++
Sbjct: 91 GGQWLDLFE 99


>sp|TOP1_ARCFU|DNA topoisomerase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VGSQWKDIY 9
V + W+DIY
Sbjct: 417 VEAGWRDIY 425


>sp|AATA_METST|A-TYPE ATP synthase subunit A|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 VGSQWKDI 8
+GS W+D+
Sbjct: 449 IGSDWRDL 456


>sp|PRIS_METMP|DNA primase small subunit PriS|Methanococcus maripaludis (strain DSM

Query: 1 VGSQWKDI 8
+GS+WK+I
Sbjct: 202 MGSRWKNI 209


>sp|PRIS_METM5|DNA primase small subunit PriS|Methanococcus maripaludis (strain C5 /

Query: 1 VGSQWKDI 8
+GS+WK+I
Sbjct: 202 MGSRWKNI 209


>sp|PRIS_METM6|DNA primase small subunit PriS|Methanococcus maripaludis (strain C6 /

Query: 1 VGSQWKDI 8
+GS+WK+I
Sbjct: 202 MGSRWKNI 209


>sp|AROE_IGNH4|SHIKIMATE dehydrogenase (NADP(+))|Ignicoccus hospitalis (strain KIN4/I /

Query: 5 WKDIYQ 10
W+D+Y+
Sbjct: 250 WRDVYE 255


>sp|PRIS_METM7|DNA primase small subunit PriS|Methanococcus maripaludis (strain C7 /

Query: 1 VGSQWKDI 8
+GS+WK+I
Sbjct: 208 MGSRWKNI 215


>sp|Y070_ARCFU|UNCHARACTERIZED protein AF_0070|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VGSQWKDIYQ 10
V ++WKDI++
Sbjct: 281 VLNKWKDIFE 290


>sp|PURA_THESM|ADENYLOSUCCINATE synthetase|Thermococcus sibiricus (strain DSM 12597

Query: 1 VGSQWKD 7
VG QW D
Sbjct: 7 VGGQWGD 13


>sp|PURA_THEON|ADENYLOSUCCINATE synthetase|Thermococcus onnurineus (strain NA1)

Query: 1 VGSQWKD 7
VG QW D
Sbjct: 7 VGGQWGD 13


>sp|PURA_THEKO|ADENYLOSUCCINATE synthetase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VGSQWKD 7
VG QW D
Sbjct: 7 VGGQWGD 13


>sp|PURA_THEGJ|ADENYLOSUCCINATE synthetase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 VGSQWKD 7
VG QW D
Sbjct: 7 VGGQWGD 13


>sp|PURA_PYRSS|ADENYLOSUCCINATE synthetase|Pyrococcus sp. (strain ST700)

Query: 1 VGSQWKD 7
VG QW D
Sbjct: 7 VGGQWGD 13


>sp|PURA_PYRFU|ADENYLOSUCCINATE synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VGSQWKD 7
VG QW D
Sbjct: 7 VGGQWGD 13


>sp|PURA_PYRAB|ADENYLOSUCCINATE synthetase|Pyrococcus abyssi (strain GE5 /

Query: 1 VGSQWKD 7
VG QW D
Sbjct: 7 VGGQWGD 13


>sp|PURA_METVS|ADENYLOSUCCINATE synthetase|Methanococcus vannielii (strain ATCC 35089

Query: 1 VGSQWKD 7
VG QW D
Sbjct: 7 VGGQWGD 13


>sp|PURA_METST|ADENYLOSUCCINATE synthetase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 VGSQWKD 7
VG QW D
Sbjct: 7 VGGQWGD 13


>sp|PURA_METMP|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VGSQWKD 7
VG QW D
Sbjct: 7 VGGQWGD 13


>sp|PURA_METM7|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain C7 /

Query: 1 VGSQWKD 7
VG QW D
Sbjct: 7 VGGQWGD 13


>sp|PURA_METM6|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain C6 /

Query: 1 VGSQWKD 7
VG QW D
Sbjct: 7 VGGQWGD 13


>sp|PURA_METM5|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain C5 /

Query: 1 VGSQWKD 7
VG QW D
Sbjct: 7 VGGQWGD 13


>sp|PURA_METJA|ADENYLOSUCCINATE synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VGSQWKD 7
VG QW D
Sbjct: 13 VGGQWGD 19


>sp|PURA_META3|ADENYLOSUCCINATE synthetase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 VGSQWKD 7
VG QW D
Sbjct: 7 VGGQWGD 13


>sp|PURA_PYRHO|ADENYLOSUCCINATE synthetase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VGSQWKD 7
VG QW D
Sbjct: 7 VGGQWGD 13


>sp|BTUCA_HALSA|COBALAMIN import system permease protein|Halobacterium salinarum (strain ATCC

Query: 2 GSQWKDI 8
GS+W D+
Sbjct: 226 GSRWHDV 232


>sp|BTUCA_HALS3|COBALAMIN import system permease protein|Halobacterium salinarum (strain ATCC

Query: 2 GSQWKDI 8
GS+W D+
Sbjct: 226 GSRWHDV 232


>sp|RAD50_PYRFU|DNA double-strand break repair Rad50|Pyrococcus furiosus (strain ATCC

Query: 1 VGSQWKDIYQ 10
VG++WK + +
Sbjct: 104 VGNEWKHVTE 113


>sp|RS12_METMA|SMALL ribosomal subunit protein uS12|Methanosarcina mazei (strain ATCC

Query: 3 SQWKDIY 9
++WKD Y
Sbjct: 18 ARWKDTY 24


>sp|G3P_SULTO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VGSQWKDIYQ 10
VG+ +K +YQ
Sbjct: 91 VGATYKPLYQ 100


>sp|SYA_METAR|ALANINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 VGSQWKDI 8
VGS W D+
Sbjct: 311 VGSAWNDV 318


>sp|RS12_METAC|SMALL ribosomal subunit protein uS12|Methanosarcina acetivorans (strain

Query: 3 SQWKDIY 9
++WKD Y
Sbjct: 18 ARWKDTY 24


>sp|ILVC_SACI2|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 1 VGSQWKDIYQ 10
+G+Q KD+ Q
Sbjct: 320 IGNQLKDLIQ 329


>sp|ILVC_SACI6|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain M.16.4

Query: 1 VGSQWKDIYQ 10
+G+Q KD+ Q
Sbjct: 320 IGNQLKDLIQ 329


>sp|ILVC_SACI4|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain M.14.25

Query: 1 VGSQWKDIYQ 10
+G+Q KD+ Q
Sbjct: 320 IGNQLKDLIQ 329


>sp|ILVC_SACI3|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 1 VGSQWKDIYQ 10
+G+Q KD+ Q
Sbjct: 320 IGNQLKDLIQ 329


>sp|ILVC_SACI7|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 1 VGSQWKDIYQ 10
+G+Q KD+ Q
Sbjct: 320 IGNQLKDLIQ 329


>sp|ILVC_SACI1|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 1 VGSQWKDIYQ 10
+G+Q KD+ Q
Sbjct: 320 IGNQLKDLIQ 329


>sp|Y1397_METJA|UNCHARACTERIZED protein MJ1397|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 WKDIYQ 10
W+D+Y+
Sbjct: 260 WRDVYE 265


>sp|ILVC_METS3|KETOL-ACID reductoisomerase (NADP(+))|Methanobrevibacter smithii (strain ATCC

Query: 2 GSQWKDI 8
G WKD+
Sbjct: 244 GGMWKDV 250


>sp|BACR1_HALSS|ARCHAERHODOPSIN-1 sp. (strain SG1)

Query: 1 VGSQWKDIY 9
VGS+ DIY
Sbjct: 83 VGSEMLDIY 91


>sp|BACR1_HALEZ|ARCHAERHODOPSIN-1 ezzemoulense (Halorubrum chaoviator)

Query: 1 VGSQWKDIY 9
VGS+ DIY
Sbjct: 83 VGSEMLDIY 91




87|Sequence|431|440|KDIYQFLCNA

>sp|RFCL_HALSA|REPLICATION factor C large subunit|Halobacterium salinarum (strain ATCC 700922

Query: 2 DIYQFLCNA 10
D Y+FL NA
Sbjct: 277 DAYEFLSNA 285


>sp|RFCL_HALS3|REPLICATION factor C large subunit|Halobacterium salinarum (strain ATCC 29341

Query: 2 DIYQFLCNA 10
D Y+FL NA
Sbjct: 277 DAYEFLSNA 285


>sp|SYDND_METHJ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 KDIYQFL 7
+DIYQF+
Sbjct: 247 RDIYQFV 253


>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 KDIYQFL 7
+DIYQ+L
Sbjct: 15 EDIYQYL 21


>sp|Y857_METTH|PROTEIN MTH_857|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 DIYQFLCN 9
D +FLCN
Sbjct: 154 DAEEFLCN 161


>sp|Y175_METJA|UNCHARACTERIZED protein MJ0175|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KDIYQFLCN 9
+D+Y+FL N
Sbjct: 163 EDLYEFLMN 171


>sp|Y129_METJA|UNCHARACTERIZED protein MJ0129|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DIYQFLC 8
D Y+FLC
Sbjct: 94 DKYKFLC 100




88|Sequence|436|445|FLCNASEREV

>sp|DNLI_SULZI|DNA ligase|Sulfophobococcus zilligii

Query: 3 CNASEREV 10
CN SEREV
Sbjct: 77 CNISEREV 84


>sp|DCD_PYRAB|DCTP deaminase|Pyrococcus abyssi (strain GE5 /

Query: 2 LCNASEREV 10
L NASE+EV
Sbjct: 106 LYNASEKEV 114


>sp|TRUD_NATPD|PROBABLE tRNA pseudouridine synthase D|Natronomonas pharaonis (strain ATCC

Query: 1 FLCNASERE 9
++C +SERE
Sbjct: 206 YVCESSERE 214




89|Sequence|441|450|SEREVAAFSN

>sp|TNAA_HALSA|PROBABLE tryptophanase|Halobacterium salinarum (strain ATCC 700922

Query: 3 REVAAFSN 10
REVAAF++
Sbjct: 194 REVAAFAD 201


>sp|TNAA_HALS3|PROBABLE tryptophanase|Halobacterium salinarum (strain ATCC 29341

Query: 3 REVAAFSN 10
REVAAF++
Sbjct: 194 REVAAFAD 201




90|Sequence|446|455|AAFSNGYTAD

>sp|UBIX_METJA|FLAVIN prenyltransferase UbiX|Methanocaldococcus jannaschii (strain ATCC

Query: 1 AAFSNGYTAD 10
+A +NGY+A+
Sbjct: 90 SAIANGYSAN 99


>sp|FAEHP_METTH|BIFUNCTIONAL enzyme Fae/Hps|Methanothermobacter thermautotrophicus (strain

Query: 1 AAFSNGYT 8
AAF+NG T
Sbjct: 31 AAFANGLT 38


>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 FSNGYT 8
F NGYT
Sbjct: 190 FGNGYT 195


>sp|MTRC_METM7|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus maripaludis (strain C7

Query: 1 AAFSNGYTAD 10
+AF+ G++AD
Sbjct: 153 SAFAGGFSAD 162


>sp|KAE1B_METLZ|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 AAFSNGYTA 9
+AF NGY A
Sbjct: 495 SAFINGYCA 503


>sp|SYM_METMJ|METHIONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 AAFSNGY 7
A+F NGY
Sbjct: 443 ASFGNGY 449


>sp|MTRC_METMP|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus maripaludis (strain DSM

Query: 2 AFSNGYTAD 10
AF+ G++AD
Sbjct: 154 AFAGGFSAD 162


>sp|MTRC_METVS|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus vannielii (strain ATCC

Query: 2 AFSNGYTAD 10
AF+ G++AD
Sbjct: 161 AFAGGFSAD 169


>sp|TTH_ACIAM|TETRATHIONATE hydrolase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 AAFSNGY 7
A FSNGY
Sbjct: 373 ANFSNGY 379




91|Sequence|451|460|GYTADHERAY

>sp|NASD_HALMT|ASSIMILATORY ferredoxin-dependent nitrite reductase|Haloferax mediterranei

Query: 2 YTADHERAY 10
+ AD ERAY
Sbjct: 242 FVADEERAY 250


>sp|XACC_HALVD|PENTONOLACTONASE XacC|Haloferax volcanii (strain ATCC 29605

Query: 1 GYTADHERAY 10
G+T D ER Y
Sbjct: 144 GFTRDRERFY 153


>sp|PUR2_METBF|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina barkeri (strain Fusaro /

Query: 5 DHERAY 10
DH+RAY
Sbjct: 212 DHKRAY 217


>sp|PUR2_METMA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 DHERAY 10
DH+RAY
Sbjct: 214 DHKRAY 219


>sp|PUR2_METAC|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 DHERAY 10
DH+RAY
Sbjct: 214 DHKRAY 219


>sp|Y1085_PICTO|PUTATIVE adenine deaminase PTO1085|Picrophilus torridus (strain ATCC 700027

Query: 1 GYTADHE 7
G T+DHE
Sbjct: 238 GITSDHE 244


>sp|SYFB_THEAC|PHENYLALANINE--TRNA ligase beta subunit|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GYTADHE 7
GY+ DH+
Sbjct: 31 GYSVDHD 37


>sp|PUR2_ARCFU|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GYTADH 6
GY ADH
Sbjct: 388 GYPADH 393


>sp|PUR2_METMJ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 DHERAY 10
DH+RAY
Sbjct: 211 DHKRAY 216


>sp|GCSH_THEGJ|PROBABLE glycine cleavage system H|Thermococcus gammatolerans (strain DSM

Query: 2 YTADHERA 9
YT DHE A
Sbjct: 15 YTKDHEWA 22




92|Sequence|456|465|HERAYAALQH

>sp|Y989_METJA|UNCHARACTERIZED protein MJ0989|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ERAYAALQ 9
ERAY+AL+
Sbjct: 15 ERAYSALR 22


>sp|Y008_METKA|UNCHARACTERIZED protein MK0008|Methanopyrus kandleri (strain AV19 /

Query: 1 HERAYAALQ 9
ERAY AL+
Sbjct: 21 QERAYTALR 29




93|Sequence|461|470|AALQHWTIRG

>sp|DHAS_METJA|ASPARTATE-SEMIALDEHYDE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ALQHWTIRG 10
AL+H TIRG
Sbjct: 329 ALEHNTIRG 337


>sp|PROB_METBU|GLUTAMATE 5-kinase|Methanococcoides burtonii (strain DSM 6242

Query: 3 LQHWT 7
+QHWT
Sbjct: 91 MQHWT 95


>sp|AATA_METBU|A-TYPE ATP synthase subunit A|Methanococcoides burtonii (strain DSM 6242

Query: 1 AALQHWTIRG 10
+ +Q W +RG
Sbjct: 182 SMMQKWPVRG 191


>sp|RL15_METS3|LARGE ribosomal subunit protein uL15|Methanobrevibacter smithii (strain

Query: 1 AALQHWT 7
A+ QHWT
Sbjct: 39 ASKQHWT 45


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 2 ALQHWTIRG 10
+L++W +RG
Sbjct: 505 SLRNWILRG 513


>sp|SRP19_METJA|SIGNAL recognition particle 19 kDa|Methanocaldococcus jannaschii (strain

Query: 4 QHWTIRG 10
QHW I G
Sbjct: 56 QHWEICG 62


>sp|SYP_METMJ|PROLINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 AALQHWTIRG 10
A HW +RG
Sbjct: 334 AKYYHWEMRG 343


>sp|SRP19_STAMF|SIGNAL recognition particle 19 kDa|Staphylothermus marinus (strain ATCC

Query: 4 QHWTIRG 10
+HW I+G
Sbjct: 63 KHWWIKG 69




94|Sequence|466|475|WTIRGPEASL

>sp|CPS_METS3|CARBAMOYL-PHOSPHATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 WTIRGPEA 8
W + GPE
Sbjct: 338 WVVHGPEG 345


>sp|HIS1_METTH|ATP phosphoribosyltransferase|Methanothermobacter thermautotrophicus

Query: 2 TIRGPE 7
TIRGPE
Sbjct: 103 TIRGPE 108


>sp|ACYP_AERPE|ACYLPHOSPHATASE pernix (strain ATCC 700893

Query: 1 WTIRGPEAS 9
W +RGP A+
Sbjct: 70 WCLRGPPAA 78


>sp|RL5_PYRFU|LARGE ribosomal subunit protein uL5|Pyrococcus furiosus (strain ATCC

Query: 2 TIRGPEA 8
T+RGP+A
Sbjct: 81 TLRGPKA 87


>sp|RL5_PYRAB|LARGE ribosomal subunit protein uL5|Pyrococcus abyssi (strain GE5 /

Query: 2 TIRGPEA 8
T+RGP+A
Sbjct: 81 TLRGPKA 87


>sp|PURL_PYRAR|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 WTIRGP 6
W +RGP
Sbjct: 53 WVVRGP 58


>sp|PURL_PYRAE|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 WTIRGP 6
W +RGP
Sbjct: 53 WVVRGP 58


>sp|RL5_PYRHO|LARGE ribosomal subunit protein uL5|Pyrococcus horikoshii (strain ATCC

Query: 2 TIRGPEA 8
T+RGP+A
Sbjct: 81 TLRGPKA 87


>sp|SYE_METBF|GLUTAMATE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 IRGPEASL 10
+RGPE L
Sbjct: 523 VRGPEGDL 530


>sp|SYE_METAC|GLUTAMATE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 IRGPEASL 10
+RGPE L
Sbjct: 523 VRGPEGDL 530


>sp|RNP3_THEGJ|RIBONUCLEASE P protein component 3|Thermococcus gammatolerans (strain DSM 15229

Query: 1 WTIRGP 6
W +RGP
Sbjct: 177 WEVRGP 182


>sp|RNP3_THEKO|RIBONUCLEASE P protein component 3|Thermococcus kodakarensis (strain ATCC

Query: 1 WTIRGP 6
W +RGP
Sbjct: 183 WEVRGP 188


>sp|AATA_METBU|A-TYPE ATP synthase subunit A|Methanococcoides burtonii (strain DSM 6242

Query: 1 WTIRGP 6
W +RGP
Sbjct: 187 WPVRGP 192




95|Sequence|471|480|PEASLAQLIS

>sp|RL1_METTP|LARGE ribosomal subunit protein uL1|Methanothrix thermoacetophila (strain

Query: 1 PEASLAQLIS 10
P A +AQ+IS
Sbjct: 135 PNADVAQMIS 144




96|Sequence|476|485|AQLISALRQH

>sp|PAN2_HALVD|PROTEASOME-ACTIVATING nucleotidase 2|Haloferax volcanii (strain ATCC 29605

Query: 1 AQLISALRQH 10
A+ +SALRQH
Sbjct: 22 AERLSALRQH 31


>sp|CAS1D_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 4|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 QLISALRQH 10
++ISALRQ+
Sbjct: 223 EVISALRQY 231




97|Sequence|481|490|ALRQHRRNDV

>sp|FEN_PYRCJ|FLAP endonuclease 1|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 ALRQHRRNDV 10
A+R+ RR DV
Sbjct: 112 AIREGRREDV 121


>sp|SRP54_META3|SIGNAL recognition particle 54 kDa|Methanococcus aeolicus (strain ATCC

Query: 1 ALRQHRRNDV 10
L+Q ++NDV
Sbjct: 175 GLKQFKKNDV 184


>sp|THI4_AERPE|THIAMINE thiazole synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 ALRQHRRNDV 10
+L++H R+DV
Sbjct: 22 SLKKHLRSDV 31


>sp|CDC68_HALSA|ORC1-TYPE DNA replication protein 8|Halobacterium salinarum (strain ATCC

Query: 2 LRQHRRN 8
LRQH RN
Sbjct: 359 LRQHDRN 365


>sp|SYE_IGNH4|GLUTAMATE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 RQHRRNDV 10
R+HR+N V
Sbjct: 302 REHRQNTV 309




98|Sequence|486|495|RRNDVVEKIR

>sp|RNH2_METBU|RIBONUCLEASE HII|Methanococcoides burtonii (strain DSM 6242

Query: 1 RRNDVVEKIR 10
RR++++EKI+
Sbjct: 157 RRDELIEKIK 166


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RRNDVVEKIR 10
R+ND+ EK++
Sbjct: 490 RQNDIPEKLK 499


>sp|VORB_METTH|KETOISOVALERATE oxidoreductase subunit VorB|Methanothermobacter thermautotrophicus

Query: 4 DVVEKIR 10
DV+EKIR
Sbjct: 338 DVLEKIR 344


>sp|NCPP_CALMQ|PROBABLE inosine/xanthosine triphosphatase|Caldivirga maquilingensis (strain

Query: 3 NDVVEK 8
NDVVEK
Sbjct: 125 NDVVEK 130


>sp|UVRB_METMP|UVRABC system protein B|Methanococcus maripaludis (strain DSM 14266

Query: 1 RRNDVVEKI 9
+R+D++EK+
Sbjct: 171 KRSDIIEKL 179


>sp|T1RH_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 RRNDVVEKIR 10
R N+V+EK R
Sbjct: 910 RLNEVIEKYR 919


>sp|RS3_IGNH4|SMALL ribosomal subunit protein uS3|Ignicoccus hospitalis (strain KIN4/I

Query: 3 NDVVEKIR 10
N++V+KIR
Sbjct: 209 NEIVQKIR 216




99|Sequence|491|500|VEKIRGLMED

>sp|PHR_METTH|DEOXYRIBODIPYRIMIDINE photo-lyase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 VEKIRGLMED 10
V++IRGLM++
Sbjct: 436 VDRIRGLMDE 445


>sp|GLYA_METTH|SERINE hydroxymethyltransferase|Methanothermobacter thermautotrophicus

Query: 1 VEKIRGLMED 10
EKIR LM+D
Sbjct: 8 TEKIRQLMKD 17


>sp|CMR2_PYRFU|CRISPR system Cmr subunit Cmr2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VEKIRGLM 8
VEK+RGL
Sbjct: 851 VEKVRGLF 858


>sp|COME_METTH|SULFOPYRUVATE decarboxylase subunit beta|Methanothermobacter thermautotrophicus

Query: 1 VEKIRGLMED 10
+E+I G++ED
Sbjct: 9 IERITGVLED 18


>sp|EF2_METVS|ELONGATION factor 2|Methanococcus vannielii (strain ATCC 35089

Query: 1 VEKIRGLME 9
VEK++ LME
Sbjct: 8 VEKVKSLME 16


>sp|HDRC1_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 1 VEKIRGLMED 10
+E +RG+M+D
Sbjct: 159 LEVVRGIMKD 168


>sp|PELO_CALMQ|PROTEIN pelota homolog|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 VEKIRGLMED 10
V +IRG++ED
Sbjct: 73 VLRIRGIIED 82


>sp|DNLI1_KORCO|DNA ligase 1|Korarchaeum cryptofilum (strain OPF8)

Query: 2 EKIRGLMED 10
EK+ GL+ED
Sbjct: 345 EKLEGLIED 353


>sp|GLYA_METTM|SERINE hydroxymethyltransferase|Methanothermobacter marburgensis (strain

Query: 1 VEKIRGLMED 10
E+IR LM+D
Sbjct: 8 TERIRDLMKD 17


>sp|RL4_PYRAE|LARGE ribosomal subunit protein uL4|Pyrobaculum aerophilum (strain ATCC

Query: 1 VEKIRGL 7
VEK+RGL
Sbjct: 275 VEKLRGL 281


>sp|GPMPP_METBU|GLUCOSYL-3-PHOSPHOGLYCERATE/MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Methanococcoides burtonii (strain DSM 6242

Query: 3 KIRGLMED 10
+IRG++ED
Sbjct: 101 RIRGVLED 108


>sp|SYP_PYRHO|PROLINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VEKIRGLMED 10
V+K+R L ED
Sbjct: 377 VDKVRELFED 386


>sp|EF2_METM7|ELONGATION factor 2|Methanococcus maripaludis (strain C7 /

Query: 1 VEKIRGLME 9
VEK++ LME
Sbjct: 8 VEKVKTLME 16


>sp|EF2_METM6|ELONGATION factor 2|Methanococcus maripaludis (strain C6 /

Query: 1 VEKIRGLME 9
VEK++ LME
Sbjct: 8 VEKVKTLME 16


>sp|EF2_METMP|ELONGATION factor 2|Methanococcus maripaludis (strain DSM 14266

Query: 1 VEKIRGLME 9
VEK++ LME
Sbjct: 8 VEKVKTLME 16


>sp|EF2_METM5|ELONGATION factor 2|Methanococcus maripaludis (strain C5 /

Query: 1 VEKIRGLME 9
VEK++ LME
Sbjct: 8 VEKVKTLME 16


>sp|MDH_METKA|MALATE dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 VEKIRGLMED 10
V+K+RGL D
Sbjct: 39 VDKLRGLRRD 48


>sp|KAE1_THEPD|TRNA N6-adenosine threonylcarbamoyltransferase|Thermofilum pendens

Query: 1 VEKIRGLMED 10
+EK+R ++ED
Sbjct: 270 LEKLRRMVED 279


>sp|HCP_METTH|HYDROXYLAMINE reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 EKIRGLMED 10
+KIR L+ED
Sbjct: 263 DKIRELVED 271


>sp|GATE_PYRFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VEKIRGLME 9
VEK+R L+E
Sbjct: 360 VEKVRKLLE 368


>sp|Y447_METJA|UNCHARACTERIZED protein MJ0447|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EKIRGLMED 10
EKI+ L+ED
Sbjct: 57 EKIKQLIED 65


>sp|SRP54_PYRIL|SIGNAL recognition particle 54 kDa|Pyrobaculum islandicum (strain DSM

Query: 1 VEKIRGL 7
VEKIRG+
Sbjct: 12 VEKIRGV 18


>sp|SRP54_PYRNV|SIGNAL recognition particle 54 kDa|Pyrobaculum neutrophilum (strain DSM

Query: 1 VEKIRGL 7
VEKIRG+
Sbjct: 12 VEKIRGV 18




100|Sequence|496|505|GLMEDTTQLE

>sp|APGM_METM5|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain C5 /

Query: 1 GLMEDTTQLE 10
G +EDT++LE
Sbjct: 111 GRIEDTSELE 120


>sp|PMDHS_METTH|PHOSPHOMEVALONATE dehydratase small subunit|Methanothermobacter thermautotrophicus

Query: 1 GLMEDTTQLE 10
GL+ED+ ++E
Sbjct: 112 GLLEDSMEVE 121




101|Sequence|501|510|TTQLETDKLA

>sp|HTR2_HALSA|SENSORY rhodopsin II transducer|Halobacterium salinarum (strain ATCC

Query: 1 TTQLETD 7
TTQLETD
Sbjct: 40 TTQLETD 46


>sp|HTR2_HALS3|SENSORY rhodopsin II transducer|Halobacterium salinarum (strain ATCC

Query: 1 TTQLETD 7
TTQLETD
Sbjct: 40 TTQLETD 46


>sp|CAH_METTT|CARBONIC anhydrase|Methanosarcina thermophila (strain ATCC 43570

Query: 1 TTQLETDKL 9
T+Q E DKL
Sbjct: 208 TSQAEADKL 216


>sp|CCA_METM5|CCA-ADDING enzyme|Methanococcus maripaludis (strain C5 /

Query: 2 TQLETDKL 9
T+LE DKL
Sbjct: 23 TELEKDKL 30




102|Sequence|506|515|TDKLALPMSP

>sp|MANB_METJA|PHOSPHOMANNOMUTASE jannaschii (strain ATCC 43067

Query: 2 DKLALPMSP 10
DK A+P+SP
Sbjct: 110 DKEAIPLSP 118


>sp|CAPPA_METKA|PHOSPHOENOLPYRUVATE carboxylase|Methanopyrus kandleri (strain AV19 /

Query: 1 TDKLALPMSP 10
+D+L +PM+P
Sbjct: 228 SDELGVPMAP 237


>sp|FLA2_PYRHO|PROBABLE flagellin PH0548|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DKLALPMSP 10
DKLA+ +SP
Sbjct: 71 DKLAIYVSP 79


>sp|RS6E_THESM|SMALL ribosomal subunit protein eS6|Thermococcus sibiricus (strain DSM

Query: 1 TDKLALPMSP 10
TDK PM P
Sbjct: 67 TDKDGFPMRP 76


>sp|RS6E_THEON|SMALL ribosomal subunit protein eS6|Thermococcus onnurineus (strain

Query: 1 TDKLALPMSP 10
TDK PM P
Sbjct: 67 TDKDGFPMRP 76


>sp|RS6E_THEGJ|SMALL ribosomal subunit protein eS6|Thermococcus gammatolerans (strain

Query: 1 TDKLALPMSP 10
TDK PM P
Sbjct: 67 TDKDGFPMRP 76


>sp|RS6E_PYRFU|SMALL ribosomal subunit protein eS6|Pyrococcus furiosus (strain ATCC

Query: 1 TDKLALPMSP 10
TDK PM P
Sbjct: 67 TDKDGFPMRP 76


>sp|RS6E_METKA|SMALL ribosomal subunit protein eS6|Methanopyrus kandleri (strain AV19

Query: 1 TDKLALPMSP 10
TDK PM P
Sbjct: 56 TDKDGFPMRP 65


>sp|RS6E_THEKO|SMALL ribosomal subunit protein eS6|Thermococcus kodakarensis (strain

Query: 1 TDKLALPMSP 10
TDK PM P
Sbjct: 67 TDKDGFPMRP 76


>sp|RS6E_PYRAB|SMALL ribosomal subunit protein eS6|Pyrococcus abyssi (strain GE5 /

Query: 1 TDKLALPMSP 10
TDK PM P
Sbjct: 67 TDKDGFPMRP 76


>sp|RS6E_PYRHO|SMALL ribosomal subunit protein eS6|Pyrococcus horikoshii (strain ATCC

Query: 1 TDKLALPMSP 10
TDK PM P
Sbjct: 67 TDKDGFPMRP 76




103|Sequence|511|520|LPMSPSPLSP

>sp|RL10_THESM|LARGE ribosomal subunit protein uL10|Thermococcus sibiricus (strain DSM

Query: 1 LPMSPSPLSP 10
+P P+PLSP
Sbjct: 123 VPAGPTPLSP 132


>sp|PYRG_SULAC|CTP synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PMSPSPL 8
P+SPSP+
Sbjct: 513 PLSPSPV 519


>sp|SYT_ARCFU|THREONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LPMSPSPLSP 10
LPM P LSP
Sbjct: 491 LPMLPVWLSP 500


>sp|LEU1_SULAC|2-ISOPROPYLMALATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PMSPSPLSP 10
PM+ P+SP
Sbjct: 306 PMTYEPISP 314


>sp|SYT_METTP|THREONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 LPMSPSPLSP 10
LPM P+ LSP
Sbjct: 496 LPMLPTWLSP 505


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PMSPSPL 8
P+SP PL
Sbjct: 516 PLSPGPL 522


>sp|SYV_SULAC|VALINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LPMSPSPLSP 10
LP+ PS ++P
Sbjct: 461 LPIDPSKVNP 470


>sp|COFD_METAC|2-PHOSPHO-L-LACTATE transferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LPMSPSPLS 9
LPMS P+S
Sbjct: 127 LPMSDDPVS 135


>sp|CCA_HALLT|CCA-ADDING enzyme|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 PMSPSPLSP 10
P+ P+PL P
Sbjct: 265 PVDPAPLDP 273


>sp|AROD_METS5|3-DEHYDROQUINATE dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 1 LPMSPSPLS 9
+PMSP PL
Sbjct: 158 MPMSPDPLE 166


>sp|TRPB_PYRHO|TRYPTOPHAN synthase beta chain|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LPMSPSPLSP 10
LP P PLSP
Sbjct: 29 LPDLPEPLSP 38


>sp|RL10_PYRAB|LARGE ribosomal subunit protein uL10|Pyrococcus abyssi (strain GE5 /

Query: 1 LPMSPSPLSP 10
+P P+PL+P
Sbjct: 124 IPAGPTPLAP 133


>sp|COFD_METMA|2-PHOSPHO-L-LACTATE transferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LPMSPSPLS 9
LPMS P+S
Sbjct: 127 LPMSDDPVS 135


>sp|RL10_PYRHO|LARGE ribosomal subunit protein uL10|Pyrococcus horikoshii (strain ATCC

Query: 1 LPMSPSPLSP 10
+P P+PL+P
Sbjct: 124 VPAGPTPLAP 133




104|Sequence|516|525|SPLSPSPIPS

>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PLSPSPIPS 10
PLSP P+P+
Sbjct: 516 PLSPGPLPA 524


>sp|Y1136_SULTO|PUTATIVE ABC transporter ATP-binding protein|Sulfurisphaera tokodaii (strain

Query: 2 PLSPSPIP 9
PL PSP+P
Sbjct: 240 PLRPSPLP 247


>sp|PYRG_SULAC|CTP synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PLSPSPI 8
PLSPSP+
Sbjct: 513 PLSPSPV 519


>sp|DHQS_METBU|3-DEHYDROQUINATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 PLSPSPIPS 10
PLSP P+ S
Sbjct: 77 PLSPDPVGS 85


>sp|PYRG_SULTO|CTP synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PLSPSPI 8
PL+PSP+
Sbjct: 514 PLAPSPV 520


>sp|HIS8_METTH|HISTIDINOL-PHOSPHATE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 SPLSPSP 7
+PL PSP
Sbjct: 49 NPLGPSP 55


>sp|PYRG_AERPE|CTP synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 PLSPSPI 8
PL+P+P+
Sbjct: 519 PLNPAPV 525


>sp|RL10_THESM|LARGE ribosomal subunit protein uL10|Thermococcus sibiricus (strain DSM

Query: 1 SPLSPSPI 8
+PLSP P+
Sbjct: 128 TPLSPGPL 135


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 2 PLSPSP 7
PL+PSP
Sbjct: 429 PLAPSP 434


>sp|MEND_HALMA|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 PLSPSPIP 9
PL P+P+P
Sbjct: 177 PLEPTPMP 184


>sp|GATD_PYRAE|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Pyrobaculum aerophilum (strain ATCC

Query: 1 SPLSPSPIP 9
+PLS P+P
Sbjct: 60 APLSAKPMP 68


>sp|Y030_SACI7|UPF0284 protein YG5714_0030|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 PLSPSPIPS 10
P+SP+ IP+
Sbjct: 67 PVSPTGIPT 75


>sp|Y030_SACI2|UPF0284 protein LS215_0030|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 PLSPSPIPS 10
P+SP+ IP+
Sbjct: 67 PVSPTGIPT 75




105|Sequence|521|530|SPIPSPNAKL

>sp|COBS_SULAC|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 IPSPNAKL 10
IPSP+A L
Sbjct: 18 IPSPSASL 25


>sp|SECY_HALSA|PROTEIN translocase subunit SecY|Halobacterium salinarum (strain ATCC

Query: 1 SPIPSPNA 8
+PI SPNA
Sbjct: 341 APIYSPNA 348


>sp|GCH3_PYRNV|GTP cyclohydrolase III|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 IPSPNA 8
+PSPNA
Sbjct: 168 LPSPNA 173


>sp|RS10_SACS2|SMALL ribosomal subunit protein uS10|Saccharolobus solfataricus (strain

Query: 2 PIPSPNAKL 10
PIP P +KL
Sbjct: 38 PIPLPTSKL 46


>sp|RS10_SACI7|SMALL ribosomal subunit protein uS10|Saccharolobus islandicus (strain

Query: 2 PIPSPNAKL 10
PIP P +KL
Sbjct: 38 PIPLPTSKL 46


>sp|RS10_SACI6|SMALL ribosomal subunit protein uS10|Saccharolobus islandicus (strain

Query: 2 PIPSPNAKL 10
PIP P +KL
Sbjct: 38 PIPLPTSKL 46


>sp|RS10_SACI4|SMALL ribosomal subunit protein uS10|Saccharolobus islandicus (strain

Query: 2 PIPSPNAKL 10
PIP P +KL
Sbjct: 38 PIPLPTSKL 46


>sp|RS10_SACI3|SMALL ribosomal subunit protein uS10|Saccharolobus islandicus (strain

Query: 2 PIPSPNAKL 10
PIP P +KL
Sbjct: 38 PIPLPTSKL 46


>sp|RS10_SACI2|SMALL ribosomal subunit protein uS10|Saccharolobus islandicus (strain

Query: 2 PIPSPNAKL 10
PIP P +KL
Sbjct: 38 PIPLPTSKL 46


>sp|RS10_SACI1|SMALL ribosomal subunit protein uS10|Saccharolobus islandicus (strain

Query: 2 PIPSPNAKL 10
PIP P +KL
Sbjct: 38 PIPLPTSKL 46


>sp|RS10_METMJ|SMALL ribosomal subunit protein uS10|Methanoculleus marisnigri (strain

Query: 2 PIPSPNAKL 10
PIP P KL
Sbjct: 37 PIPLPTKKL 45


>sp|RS10_METHJ|SMALL ribosomal subunit protein uS10|Methanospirillum hungatei JF-1

Query: 2 PIPSPNAKL 10
PIP P KL
Sbjct: 37 PIPLPTRKL 45


>sp|RS4_METST|SMALL ribosomal subunit protein uS4|Methanosphaera stadtmanae (strain

Query: 5 SPNAKL 10
SPNAKL
Sbjct: 84 SPNAKL 89




106|Sequence|526|535|PNAKLENSAL

>sp|PURQ_METBF|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanosarcina barkeri (strain Fusaro /

Query: 1 PNAKLENSA 9
PN LEN A
Sbjct: 180 PNGSLENIA 188


>sp|PURQ_METAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PNAKLENSA 9
PN LEN A
Sbjct: 180 PNGSLENIA 188


>sp|PURQ_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PNAKLENSA 9
PN LEN A
Sbjct: 180 PNGSLENIA 188


>sp|RS4_METST|SMALL ribosomal subunit protein uS4|Methanosphaera stadtmanae (strain

Query: 1 PNAKLE 6
PNAKLE
Sbjct: 85 PNAKLE 90




107|Sequence|531|540|ENSALLTVEP

***** No hits found ******


108|Sequence|536|545|LTVEPSPQDK

>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 LTVEPSPQ 8
LT+EPSPQ
Sbjct: 101 LTLEPSPQ 108


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 3 VEPSPQD 9
+EP+PQD
Sbjct: 676 IEPAPQD 682


>sp|Y1725_METS5|PUTATIVE HTH-type transcriptional regulatory protein|Metallosphaera sedula

Query: 1 LTVEPSPQDK 10
+TVEP QD+
Sbjct: 234 VTVEPKNQDQ 243


>sp|PYLC_METMA|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 PSPQDK 10
P+PQDK
Sbjct: 125 PTPQDK 130


>sp|PYLC_METAC|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 PSPQDK 10
P+PQDK
Sbjct: 117 PTPQDK 122


>sp|DCHI_THEKO|DIACETYLCHITOBIOSE deacetylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LTVEPSPQD 9
L +EP P D
Sbjct: 35 LCIEPHPDD 43


>sp|LEU1_IGNH4|PROBABLE 2-isopropylmalate synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 LTVEPSPQD 9
+TVE SP+D
Sbjct: 145 VTVEFSPED 153


>sp|AMPK_PYRFU|LYSYL aminopeptidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LTVEPSPQ 8
L VEPSP+
Sbjct: 278 LQVEPSPR 285


>sp|AROE_HALLT|SHIKIMATE dehydrogenase (NADP(+))|Halorubrum lacusprofundi (strain ATCC

Query: 1 LTVEPSPQD 9
+T EP+P D
Sbjct: 34 VTFEPAPDD 42


>sp|TRPB2_AERPE|TRYPTOPHAN synthase beta chain 2|Aeropyrum pernix (strain ATCC 700893

Query: 3 VEPSPQDK 10
V PSP DK
Sbjct: 185 VYPSPSDK 192




109|Sequence|541|550|SPQDKNKGFF

>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PQDKNKG 8
P+D+NKG
Sbjct: 59 PEDENKG 65


>sp|PELO_METPE|PROTEIN pelota homolog|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 SPQDKNKGFF 10
+P D +GFF
Sbjct: 167 APVDSREGFF 176


>sp|MTM6_METJA|TYPE II methyltransferase M.MjaVI|Methanocaldococcus jannaschii

Query: 2 PQDKNKG 8
P DKNKG
Sbjct: 85 PLDKNKG 91


>sp|SYE_METAR|GLUTAMATE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 PQDKNKGF 9
PQD +GF
Sbjct: 443 PQDHKRGF 450


>sp|SPSS_METVS|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus vannielii (strain ATCC 35089

Query: 3 QDKNKGFF 10
+DK +GFF
Sbjct: 325 KDKRRGFF 332


>sp|SPSS_METM7|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus maripaludis (strain C7 /

Query: 3 QDKNKGFF 10
+DK +GFF
Sbjct: 325 KDKRRGFF 332


>sp|SPSS_METM5|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus maripaludis (strain C5 /

Query: 3 QDKNKGFF 10
+DK +GFF
Sbjct: 325 KDKRRGFF 332


>sp|SPSS_METJA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SPQDKNKGFF 10
+ +DK +GFF
Sbjct: 320 AKKDKRRGFF 329


>sp|AMPPA_META3|AMP phosphorylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 PQDKNKGFF 10
P+DK G F
Sbjct: 444 PKDKKAGIF 452


>sp|SPSS_METMP|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 QDKNKGFF 10
+DK +GFF
Sbjct: 325 KDKRRGFF 332


>sp|SPSS_METM6|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus maripaludis (strain C6 /

Query: 3 QDKNKGFF 10
+DK +GFF
Sbjct: 325 KDKRRGFF 332


>sp|PGK_SULAC|PHOSPHOGLYCERATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SPQDKNKG 8
SP DKN G
Sbjct: 30 SPVDKNTG 37


>sp|Y779_METJA|UNCHARACTERIZED protein MJ0779|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PQDKNKGF 9
P+D +KGF
Sbjct: 239 PEDISKGF 246


>sp|Y1625_ARCFU|UNCHARACTERIZED protein AF_1625|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SPQDKNKGFF 10
SPQ KG F
Sbjct: 328 SPQTDEKGVF 337


>sp|Y1054_METJA|UNCHARACTERIZED protein MJ1054|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DKNKGFF 10
DK+KGF+
Sbjct: 820 DKSKGFY 826


>sp|Y665_METMP|UPF0305 protein MMP0665|Methanococcus maripaludis (strain DSM 14266

Query: 2 PQDKNKGFF 10
PQD KG+
Sbjct: 37 PQDYKKGYI 45




110|Sequence|546|555|NKGFFVDESE

>sp|Y663_METJA|UNCHARACTERIZED protein MJ0663|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KGFFVDESE 10
KG+FVD++E
Sbjct: 124 KGYFVDKAE 132


>sp|G6PI_THELI|GLUCOSE-6-PHOSPHATE isomerase|Thermococcus litoralis

Query: 2 KGFFVDE 8
KG+F+DE
Sbjct: 32 KGYFIDE 38


>sp|GPI_THEON|GLUCOSE-6-PHOSPHATE isomerase|Thermococcus onnurineus (strain NA1)

Query: 2 KGFFVDE 8
KG+F+DE
Sbjct: 32 KGYFIDE 38


>sp|Y1649_METJA|PUTATIVE ribosomal RNA large subunit|Methanocaldococcus jannaschii (strain

Query: 3 GFFVDESE 10
GFF+D+ E
Sbjct: 195 GFFLDQRE 202


>sp|GPI_THEGJ|GLUCOSE-6-PHOSPHATE isomerase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 KGFFVDE 8
+G+FVDE
Sbjct: 32 RGYFVDE 38


>sp|GLMS_PYRFU|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus furiosus (strain ATCC

Query: 1 NKGFFVDESE 10
NK F+D+ E
Sbjct: 203 NKAVFLDDGE 212


>sp|G6PI_PYRAB|GLUCOSE-6-PHOSPHATE isomerase|Pyrococcus abyssi (strain GE5 /

Query: 2 KGFFVDE 8
KG+F+DE
Sbjct: 31 KGYFLDE 37


>sp|G6PI_PYRHO|GLUCOSE-6-PHOSPHATE isomerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KGFFVDE 8
KG+F+DE
Sbjct: 31 KGYFLDE 37


>sp|Y1653_METJA|PUTATIVE ribosomal RNA large subunit|Methanocaldococcus jannaschii (strain

Query: 3 GFFVDESE 10
GFF+D+ E
Sbjct: 194 GFFLDQRE 201


>sp|MRE11_PYRFU|DNA double-strand break repair protein|Pyrococcus furiosus (strain ATCC

Query: 1 NKGFFVDE 8
NKGF++ E
Sbjct: 252 NKGFYIVE 259


>sp|SMC_PYRFU|CHROMOSOME partition protein Smc|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NKGFFVDESE 10
++GF +DE E
Sbjct: 90 DRGFPIDEDE 99




111|Sequence|551|560|VDESEPLLRC

>sp|ACD1_ARCFU|ACETATE--COA ligase [ADP-forming] I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VDESEPLLR 9
VDESE +LR
Sbjct: 404 VDESERILR 412


>sp|KTHY_METST|PROBABLE thymidylate kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 VDESEPLLRC 10
+DE E L RC
Sbjct: 131 IDEDEALKRC 140


>sp|SYA_METJA|ALANINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VDESEPLLRC 10
++ES +LRC
Sbjct: 747 LEESAEILRC 756




112|Sequence|556|565|PLLRCDSTSS

>sp|Y2656_METAC|UPF0228 protein MA_2656|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LLRCDST 8
LLRC ST
Sbjct: 339 LLRCGST 345




113|Sequence|561|570|DSTSSGSSAL

***** No hits found ******


114|Sequence|566|575|GSSALSRNGS

>sp|HEM2_ARCFU|DELTA-AMINOLEVULINIC acid dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GSSALSRNG 9
GSSA +NG
Sbjct: 89 GSSAYDQNG 97




115|Sequence|571|580|SRNGSFITKE

>sp|THIC2_METST|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 SRNGSFIT 8
SR GSFI+
Sbjct: 184 SRGGSFIS 191


>sp|Y835_METJA|UNCHARACTERIZED protein MJ0835|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SRNGSFIT 8
S++GSFIT
Sbjct: 248 SKDGSFIT 255


>sp|NTPTH_ARCFU|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GSFITKE 10
G FITKE
Sbjct: 31 GGFITKE 37


>sp|MFNF_METJA|(4- jannaschii (strain ATCC 43067

Query: 3 NGSFITKE 10
NG+F+T E
Sbjct: 95 NGNFLTSE 102


>sp|NTPTH_METJA|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GSFITKE 10
G FITKE
Sbjct: 32 GGFITKE 38


>sp|Y650_METJA|UNCHARACTERIZED protein MJ0650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NGSFIT 8
NGSFIT
Sbjct: 488 NGSFIT 493


>sp|Y1654_ARCFU|UNCHARACTERIZED protein AF_1654|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 NGSFIT 8
NGSF+T
Sbjct: 69 NGSFVT 74




116|Sequence|576|585|FITKEKKDTV

>sp|GCS2_HALLT|GLUTAMATE--CYSTEINE ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 FITKEKKDTV 10
FIT++ +DTV
Sbjct: 299 FITRDGEDTV 308


>sp|MTRB_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit B|Methanosarcina barkeri (strain

Query: 2 ITKEKKDTV 10
IT+E+KD++
Sbjct: 21 ITQERKDSI 29


>sp|ARGD_METAC|ACETYLORNITHINE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 ITKEKKDTV 10
ITKE+ DTV
Sbjct: 380 ITKEQIDTV 388


>sp|MTRB_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit B|Methanosarcina mazei (strain ATCC

Query: 2 ITKEKKDTV 10
+T+E+KD++
Sbjct: 21 VTQERKDSI 29


>sp|SYDND_SACS2|ASPARTATE--TRNA(ASP/ASN) ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FITKEKKD 8
F TK+KKD
Sbjct: 329 FYTKQKKD 336




117|Sequence|581|590|KKDTVLRQVR

>sp|RTCB_PYRHO|TRNA-SPLICING ligase RtcB|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KDTVLRQVR 10
K+ VLR+VR
Sbjct: 269 KEEVLREVR 277


>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KDTVLRQVR 10
KDT+LR R
Sbjct: 60 KDTILRYKR 68




118|Sequence|586|595|LRQVRLDPCD

>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii (strain

Query: 1 LRQVRLDPC 9
+R+V L+PC
Sbjct: 1043 MREVGLEPC 1051


>sp|CG121_PYRAB|KEOPS complex subunit Cgi121|Pyrococcus abyssi (strain GE5 /

Query: 1 LRQVRLDPCD 10
LR+ L PCD
Sbjct: 145 LREEPLKPCD 154


>sp|NADE_THEAC|NH(3)-DEPENDENT NAD(+) synthetase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 RQVRLDP 8
R+VR+DP
Sbjct: 80 REVRIDP 86


>sp|NFI_METKA|ENDONUCLEASE V|Methanopyrus kandleri (strain AV19 /

Query: 2 RQVRLDPCD 10
R+VRL+P D
Sbjct: 24 RKVRLEPLD 32


>sp|HEM2_METTH|DELTA-AMINOLEVULINIC acid dehydratase|Methanothermobacter thermautotrophicus (strain

Query: 1 LRQVRLDPCD 10
LR+ RL P D
Sbjct: 25 LRETRLHPSD 34


>sp|CAS1D_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 4|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LRQVRLDP 8
LRQ LDP
Sbjct: 228 LRQYNLDP 235




119|Sequence|591|600|LDPCDLQPIF

>sp|SYT_META3|THREONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 CDLQPIF 10
C LQPIF
Sbjct: 623 CSLQPIF 629


>sp|SYT_METMP|THREONINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 4 CDLQPIF 10
C +QPIF
Sbjct: 615 CSMQPIF 621


>sp|PYRC_METAC|DIHYDROOROTASE acetivorans (strain ATCC 35395

Query: 1 LDPCDLQPI 9
+DP +LQPI
Sbjct: 390 VDPRNLQPI 398


>sp|TRPB2_ARCFU|TRYPTOPHAN synthase beta chain 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LDPCDLQPIF 10
+ P DL+PIF
Sbjct: 43 VKPEDLEPIF 52


>sp|NADE_PICTO|NH(3)-DEPENDENT NAD(+) synthetase|Picrophilus torridus (strain ATCC 700027

Query: 4 CDLQPI 9
CDL+PI
Sbjct: 149 CDLEPI 154


>sp|GLNA2_HALMT|GAMMA-GLUTAMYLPUTRESCINE synthetase|Haloferax mediterranei (strain ATCC 33500

Query: 1 LDPCDL 6
+DPCDL
Sbjct: 372 VDPCDL 377


>sp|PYRC_METMA|DIHYDROOROTASE mazei (strain ATCC BAA-159

Query: 1 LDPCDLQPI 9
+DP +LQP+
Sbjct: 390 VDPRNLQPV 398


>sp|EF2_METRM|ELONGATION factor 2|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 2 DPCDLQPI 9
+PC L+PI
Sbjct: 620 NPCLLEPI 627


>sp|LONB_METJA|ARCHAEAL Lon protease|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LDPCDLQPIF 10
L+P DL+P+
Sbjct: 174 LNPMDLKPVL 183


>sp|AGAL_SACS2|ALPHA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 3 PCDLQPIF 10
PC L P+F
Sbjct: 120 PCWLYPVF 127


>sp|DCD_CALMQ|DCTP deaminase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 LDPCDLQ 7
+DPC+L+
Sbjct: 50 IDPCELE 56


>sp|GLMS_AERPE|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Aeropyrum pernix (strain ATCC 700893

Query: 1 LDPCDLQPIF 10
LDP L P F
Sbjct: 580 LDPYSLTPYF 589


>sp|NAH2_METJA|PROBABLE Na(+)/H(+) antiporter 2|Methanocaldococcus jannaschii (strain ATCC

Query: 2 DPCDLQPIF 10
DP L PIF
Sbjct: 131 DPATLIPIF 139




120|Sequence|596|605|LQPIFDDMLH

>sp|PYRC_METAC|DIHYDROOROTASE acetivorans (strain ATCC 35395

Query: 1 LQPIFDDMLH 10
LQPI DMLH
Sbjct: 395 LQPIRADMLH 404


>sp|PYRC_METMA|DIHYDROOROTASE mazei (strain ATCC BAA-159

Query: 1 LQPIFDDMLH 10
LQP+ DMLH
Sbjct: 395 LQPVRADMLH 404


>sp|HIS7_METS5|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 3 PIFDDMLH 10
P FD MLH
Sbjct: 35 PFFDHMLH 42


>sp|MTRE_METFE|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanothermus fervidus

Query: 2 QPIFDDML 9
QP+F DML
Sbjct: 121 QPVFLDML 128


>sp|PHS_SULAC|PUTATIVE pterin-4-alpha-carbinolamine dehydratase|Sulfolobus

Query: 1 LQPIFDDMLH 10
+QPI D+M H
Sbjct: 44 IQPIADEMDH 53


>sp|NDK_PICTO|NUCLEOSIDE diphosphate kinase|Picrophilus torridus (strain ATCC 700027

Query: 1 LQPIFDDML 9
L+P FDD++
Sbjct: 54 LKPFFDDLV 62


>sp|Y584_THEVO|PROTEIN TV0584|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LQPIFDDM 8
L P FDDM
Sbjct: 70 LGPTFDDM 77


>sp|Y487_THEAC|PROTEIN Ta0487|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LQPIFDDM 8
L P FDDM
Sbjct: 70 LGPTFDDM 77


>sp|MTRE_METTM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanothermobacter marburgensis

Query: 2 QPIFDDML 9
QP+F DML
Sbjct: 122 QPLFMDML 129


>sp|HIS7_METKA|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanopyrus kandleri (strain AV19 /

Query: 3 PIFDDMLH 10
P FD +LH
Sbjct: 37 PFFDHLLH 44


>sp|MTRE_METTH|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanothermobacter

Query: 2 QPIFDDML 9
QP+F DML
Sbjct: 122 QPLFMDML 129


>sp|DSRA_ARCFU|SULFITE reductase, dissimilatory-type subunit alpha|Archaeoglobus fulgidus

Query: 1 LQPIFDDM 8
LQP F+D+
Sbjct: 147 LQPCFEDL 154


>sp|DSRB_ARCFU|SULFITE reductase, dissimilatory-type subunit beta|Archaeoglobus fulgidus

Query: 3 PIFDDMLH 10
P F D+LH
Sbjct: 13 PYFRDLLH 20


>sp|DNAG_METM7|DNA primase DnaG|Methanococcus maripaludis (strain C7 /

Query: 2 QPIFDD 7
+P+FDD
Sbjct: 309 EPVFDD 314


>sp|NDK_IGNH4|NUCLEOSIDE diphosphate kinase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 QPIFDDML 9
+P FDD++
Sbjct: 55 KPFFDDLI 62


>sp|PHS_SULTO|PUTATIVE pterin-4-alpha-carbinolamine dehydratase|Sulfurisphaera tokodaii

Query: 1 LQPIFDDMLH 10
+QPI D M H
Sbjct: 45 VQPIADSMNH 54




121|Sequence|601|610|DDMLHFLNPE

>sp|RNJ_METJA|RIBONUCLEASE J|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DMLHFLNPE 10
DML +LNPE
Sbjct: 395 DMLRWLNPE 403


>sp|HMD_METVO|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus voltae

Query: 4 LHFLNPE 10
+HF+NPE
Sbjct: 119 IHFVNPE 125


>sp|VHUA_METJA|F420-NON-REDUCING hydrogenase vhu subunit A|Methanocaldococcus jannaschii (strain

Query: 1 DDMLHFLNPE 10
DD L FL+P+
Sbjct: 236 DDTLRFLSPD 245


>sp|PHSG_THELN|MALTODEXTRIN phosphorylase|Thermococcus litoralis (strain ATCC 51850

Query: 1 DDMLHFLNPE 10
D H++NPE
Sbjct: 82 DQFRHYMNPE 91


>sp|PURL_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DDMLHFLNPE 10
+D L+F NPE
Sbjct: 532 NDCLNFGNPE 541


>sp|LONB_THEVO|ARCHAEAL Lon protease|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DDMLHFLNPE 10
+D+L F NPE
Sbjct: 80 EDILVFPNPE 89


>sp|LONB_THEKO|ARCHAEAL Lon protease|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DDMLHFLNPE 10
+D+L F NPE
Sbjct: 88 EDILVFPNPE 97


>sp|LONB_THEAC|ARCHAEAL Lon protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DDMLHFLNPE 10
+D+L F NPE
Sbjct: 80 EDILVFPNPE 89


>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DDMLHFLNPE 10
+D+L F NPE
Sbjct: 82 EDILVFPNPE 91


>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 1 DDMLHFLNPE 10
+D+L F NPE
Sbjct: 92 EDILVFPNPE 101


>sp|PURL_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DMLHFLNPE 10
D L+F NPE
Sbjct: 520 DALNFGNPE 528


>sp|HIS7_ARCFU|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DDMLHFLN 8
+D LHFL+
Sbjct: 118 EDFLHFLD 125


>sp|METK_METBU|S-ADENOSYLMETHIONINE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DDMLHFLN 8
DDM H++N
Sbjct: 221 DDMDHYIN 228


>sp|PURL_METTP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothrix thermoacetophila (strain DSM

Query: 2 DMLHFLNPE 10
D L+F NPE
Sbjct: 516 DCLNFGNPE 524


>sp|GLMS_METJA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanocaldococcus jannaschii

Query: 2 DMLHFLNP 9
D LH+ NP
Sbjct: 257 DNLHYTNP 264


>sp|T1R1_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 DDMLHFLNP 9
DD+ + LNP
Sbjct: 141 DDIFYILNP 149


>sp|PURL_METTM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter marburgensis (strain ATCC

Query: 2 DMLHFLNPE 10
D L+F NPE
Sbjct: 474 DCLNFGNPE 482


>sp|HMD_METVS|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 4 LHFLNPE 10
+HF++PE
Sbjct: 119 IHFVHPE 125


>sp|HMD_METM7|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus maripaludis (strain C7 /

Query: 4 LHFLNPE 10
+HF++PE
Sbjct: 119 IHFVHPE 125


>sp|HMD_METM5|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus maripaludis (strain C5 /

Query: 4 LHFLNPE 10
+HF++PE
Sbjct: 119 IHFVHPE 125


>sp|HMD_METMP|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 4 LHFLNPE 10
+HF++PE
Sbjct: 119 IHFVHPE 125


>sp|PURL_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter thermautotrophicus

Query: 2 DMLHFLNPE 10
D L+F NPE
Sbjct: 474 DCLNFGNPE 482


>sp|HMD_METTL|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanothermococcus thermolithotrophicus

Query: 4 LHFLNPE 10
+HF++PE
Sbjct: 119 IHFVHPE 125


>sp|HMD_METKA|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 4 LHFLNPE 10
+HFL+PE
Sbjct: 126 IHFLSPE 132


>sp|PCKG_THEAC|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DDMLHFLNPE 10
D ML+ NPE
Sbjct: 295 DGMLYATNPE 304


>sp|Y817_ARCFU|UNCHARACTERIZED protein AF_0817|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DDMLHFLNPE 10
DD L+ + PE
Sbjct: 591 DDYLYIIGPE 600


>sp|PURL_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma volcanium (strain ATCC 51530

Query: 2 DMLHFLNPE 10
D L+F NPE
Sbjct: 520 DALNFGNPE 528


>sp|Y524_METJA|UNCHARACTERIZED protein MJ0524|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 MLHFLNP 9
M H+LNP
Sbjct: 40 MPHYLNP 46


>sp|PURL_PICTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Picrophilus torridus (strain ATCC 700027

Query: 2 DMLHFLNPE 10
D L+F NPE
Sbjct: 510 DSLNFGNPE 518


>sp|MALQ_THEKO|4-ALPHA-GLUCANOTRANSFERASE kodakarensis (strain ATCC BAA-918

Query: 5 HFLNPE 10
HFL PE
Sbjct: 490 HFLEPE 495


>sp|Y329_METJA|UNCHARACTERIZED protein MJ0329|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LHFLNP 9
LH++NP
Sbjct: 83 LHYINP 88


>sp|PURL_METST|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 DMLHFLNPE 10
D L+F NPE
Sbjct: 474 DCLNFGNPE 482


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 HFLNPE 10
HF+NP+
Sbjct: 122 HFVNPD 127


>sp|PURL_METS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 DMLHFLNPE 10
D L+F NPE
Sbjct: 474 DCLNFGNPE 482




122|Sequence|606|615|FLNPEELRVI

>sp|GCH1L_METTH|GTP cyclohydrolase 1 type 2|Methanothermobacter thermautotrophicus

Query: 2 LNPEELRVI 10
LNPE LRV+
Sbjct: 128 LNPETLRVV 136


>sp|COFH_ARCFU|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Archaeoglobus fulgidus (strain ATCC

Query: 1 FLNPEELR 8
F++PEELR
Sbjct: 315 FMHPEELR 322


>sp|DAPF_METJA|DIAMINOPIMELATE epimerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LNPEELRVI 10
LNP E+R++
Sbjct: 217 LNPNEIRIV 225


>sp|NNR_METHJ|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanospirillum hungatei JF-1

Query: 1 FLNPEELRVI 10
L+PEE+R I
Sbjct: 25 LLSPEEMRRI 34


>sp|AMPPA_METM5|AMP phosphorylase|Methanococcus maripaludis (strain C5 /

Query: 2 LNPEELRVI 10
LNP E+R I
Sbjct: 102 LNPHEIRTI 110


>sp|HYPA_METKA|HYDROGENASE maturation factor HypA|Methanopyrus kandleri (strain AV19 /

Query: 1 FLNPEELR 8
LNPE+LR
Sbjct: 38 LLNPEQLR 45


>sp|AMPPA_METMP|AMP phosphorylase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LNPEELRVI 10
LNP E+R I
Sbjct: 102 LNPHEIRTI 110


>sp|AMPPA_METM7|AMP phosphorylase|Methanococcus maripaludis (strain C7 /

Query: 2 LNPEELRVI 10
LNP E+R I
Sbjct: 102 LNPHEIRTI 110


>sp|AMPPA_METM6|AMP phosphorylase|Methanococcus maripaludis (strain C6 /

Query: 2 LNPEELRVI 10
LNP E+R I
Sbjct: 102 LNPHEIRTI 110


>sp|Y1653_METJA|PUTATIVE ribosomal RNA large subunit|Methanocaldococcus jannaschii (strain

Query: 1 FLNPEELRVI 10
F NP+E+R++
Sbjct: 56 FKNPKEVRIM 65


>sp|PUR2_METTH|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 FLNPEELR 8
F +PEELR
Sbjct: 123 FSDPEELR 130


>sp|SYD_THEVO|ASPARTATE--TRNA(ASP) ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LNPEELRVI 10
+PEELR+I
Sbjct: 300 FSPEELRII 308


>sp|OTC_METMJ|ORNITHINE carbamoyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 FLNPEELRV 9
FLNP+++++
Sbjct: 72 FLNPQDMQL 80


>sp|COFH_METM7|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus maripaludis (strain C7

Query: 1 FLNPEEL 7
FLNP+E+
Sbjct: 79 FLNPDEV 85


>sp|GAPOR_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE:FERREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FLNPEEL 7
FL PEEL
Sbjct: 523 FLEPEEL 529


>sp|TRPF_METMP|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus maripaludis (strain DSM 14266

Query: 4 PEELRVI 10
PEELR++
Sbjct: 11 PEELRIV 17


>sp|HYPA_METST|HYDROGENASE maturation factor HypA|Methanosphaera stadtmanae (strain ATCC

Query: 2 LNPEELRVI 10
LNPE+LR +
Sbjct: 39 LNPEQLRFM 47


>sp|PNCB_METBU|NICOTINATE phosphoribosyltransferase|Methanococcoides burtonii (strain DSM

Query: 2 LNPEELRVI 10
NPEE++++
Sbjct: 89 FNPEEVKIV 97


>sp|COFH_METM5|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus maripaludis (strain C5

Query: 1 FLNPEEL 7
FLNP+E+
Sbjct: 79 FLNPDEV 85


>sp|Y1556_METMJ|UPF0200 protein Memar_1556|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LNPEELR 8
L PEELR
Sbjct: 130 LTPEELR 136


>sp|RL18_AERPE|LARGE ribosomal subunit protein uL18|Aeropyrum pernix (strain ATCC 700893

Query: 2 LNPEEL 7
LNPEEL
Sbjct: 176 LNPEEL 181


>sp|Y551_METJA|UNCHARACTERIZED protein MJ0551|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FLNPEELRVI 10
F+N E+L+ I
Sbjct: 32 FINAEQLKAI 41


>sp|Y1551_METVS|UPF0285 protein Mevan_1551|Methanococcus vannielii (strain ATCC 35089

Query: 1 FLNPEELRVI 10
FLNPE VI
Sbjct: 259 FLNPENNVVI 268


>sp|AROA_THEVO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 FLNPEELRVI 10
+N EE+RVI
Sbjct: 268 LINGEEIRVI 277


>sp|HMD_METKA|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 FLNPEEL 7
FL+PEE+
Sbjct: 128 FLSPEEM 134


>sp|Y304_SULTO|UPF0215 protein STK_03040|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FLNPEELR 8
F+NP EL+
Sbjct: 74 FVNPSELK 81


>sp|RFCS_AERPE|REPLICATION factor C small subunit|Aeropyrum pernix (strain ATCC 700893

Query: 4 PEELRVI 10
PEELRV+
Sbjct: 281 PEELRVL 287


>sp|RFCL_PYRFU|REPLICATION factor C large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FLNPEEL 7
+LNPEE+
Sbjct: 267 YLNPEEI 273


>sp|Y3016_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 FLNPEEL 7
FL+PEEL
Sbjct: 538 FLSPEEL 544


>sp|Y157_METMP|DNA-BINDING protein MMP0157|Methanococcus maripaludis (strain DSM 14266

Query: 2 LNPEELR 8
+NPEE+R
Sbjct: 1 MNPEEIR 7


>sp|RL22_PYRAB|LARGE ribosomal subunit protein uL22|Pyrococcus abyssi (strain GE5 /

Query: 2 LNPEELRVI 10
L+P++LR+I
Sbjct: 107 LDPDKLRII 115


>sp|KDPA_THEAC|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Thermoplasma acidophilum (strain

Query: 1 FLNPEELRV 9
F+NPE R+
Sbjct: 463 FVNPESSRI 471


>sp|CARB_METMJ|CARBAMOYL phosphate synthase large chain|Methanoculleus marisnigri (strain

Query: 3 NPEELRVI 10
NP E+R+I
Sbjct: 405 NPSEIRMI 412


>sp|Y886_METJA|PUTATIVE molybdopterin biosynthesis protein MJ0886|Methanocaldococcus

Query: 3 NPEELRVI 10
NP EL+VI
Sbjct: 76 NPVELKVI 83


>sp|METK_CALMQ|S-ADENOSYLMETHIONINE synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 FLNPEELRVI 10
FLNP++ VI
Sbjct: 126 FLNPDQHLVI 135


>sp|HYPA_METS3|HYDROGENASE maturation factor HypA|Methanobrevibacter smithii (strain ATCC

Query: 2 LNPEELRVI 10
+NPE+LR +
Sbjct: 39 INPEQLRFM 47


>sp|TRM10_THEKO|TRNA (guanine(9)-/adenine(9)-N1)-methyltransferase|Thermococcus

Query: 2 LNPEELR 8
L PEELR
Sbjct: 86 LTPEELR 92


>sp|PYRB_METKA|ASPARTATE carbamoyltransferase catalytic subunit|Methanopyrus kandleri

Query: 1 FLNPEELRV 9
++PEELR+
Sbjct: 186 LISPEELRM 194


>sp|PUS10_IGNAA|TRNA pseudouridine synthase Pus10|Ignisphaera aggregans (strain DSM

Query: 1 FLNPEEL 7
FLNPE +
Sbjct: 174 FLNPEAM 180


>sp|TRMY_PYRHO|TRNA (pseudouridine(54)-N(1))-methyltransferase|Pyrococcus horikoshii

Query: 2 LNPEELRV 9
LNP+EL +
Sbjct: 78 LNPDELSI 85




123|Sequence|611|620|ELRVIEEIPQ

>sp|PELO_METJA|PROTEIN pelota homolog|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LRVIEEIPQ 10
+++IEEIPQ
Sbjct: 1 MKIIEEIPQ 9


>sp|Y1236_ARCFU|UNCHARACTERIZED protein AF_1236|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LRVIEEIP 9
L V+EE+P
Sbjct: 147 LEVVEEVP 154


>sp|Y1628_METJA|UNCHARACTERIZED protein MJ1628|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RVIEEIPQ 10
RVIEEI Q
Sbjct: 69 RVIEEIKQ 76


>sp|CDC62_AERPE|ORC1-TYPE DNA replication protein 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 LRVIEEIPQ 10
LRV EEIP
Sbjct: 163 LRVHEEIPS 171


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LRVIEEIPQ 10
+RV++EIP+
Sbjct: 1559 IRVLDEIPE 1567


>sp|URIC_HALJB|URICASE jeotgali (strain DSM 18796

Query: 2 LRVIEEIPQ 10
LRV+E PQ
Sbjct: 249 LRVLERYPQ 257


>sp|AATB_METKA|A-TYPE ATP synthase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 1 ELRVIEEIP 9
ELRV E++P
Sbjct: 381 ELRVSEKVP 389


>sp|URIC_HALVD|URICASE volcanii (strain ATCC 29605

Query: 2 LRVIEEIPQ 10
LRV+E PQ
Sbjct: 251 LRVLERYPQ 259


>sp|FAEHP_METMJ|BIFUNCTIONAL enzyme Fae/Hps|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 RVIEEIPQ 10
RV++E+PQ
Sbjct: 189 RVLDELPQ 196


>sp|RRP4_PYRAB|EXOSOME complex component Rrp4|Pyrococcus abyssi (strain GE5 /

Query: 1 ELRVIEEIPQ 10
E VIEEIP+
Sbjct: 235 EKGVIEEIPK 244


>sp|DP2S_PYRFU|DNA polymerase II small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ELRVIEEIPQ 10
+L VIEE+P
Sbjct: 539 DLLVIEEVPD 548


>sp|TOP6A_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LRVIEEIPQ 10
L++IEE P+
Sbjct: 152 LKIIEETPE 160


>sp|PELO_METVS|PROTEIN pelota homolog|Methanococcus vannielii (strain ATCC 35089

Query: 2 LRVIEEIPQ 10
+++I+EIP+
Sbjct: 1 MKIIQEIPE 9


>sp|PELO_METM5|PROTEIN pelota homolog|Methanococcus maripaludis (strain C5 /

Query: 2 LRVIEEIPQ 10
+++I+EIP+
Sbjct: 1 MKIIQEIPE 9




124|Sequence|616|625|EEIPQAEDKL

>sp|RS4E_KORCO|SMALL ribosomal subunit protein eS4|Korarchaeum cryptofilum (strain OPF8)

Query: 2 EIPQAEDKL 10
EIPQ+E K+
Sbjct: 114 EIPQSESKM 122


>sp|FEN_NITMS|FLAP endonuclease 1|Nitrosopumilus maritimus (strain SCM1)

Query: 1 EEIPQAEDKL 10
EEIPQ +++L
Sbjct: 261 EEIPQIQEQL 270


>sp|RRP4_PYRAB|EXOSOME complex component Rrp4|Pyrococcus abyssi (strain GE5 /

Query: 1 EEIPQAEDKL 10
EE PQ ED++
Sbjct: 246 EEEPQGEDEV 255


>sp|EF1A_METJA|ELONGATION factor 1-alpha|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EEIPQAE 7
E+IPQAE
Sbjct: 280 EQIPQAE 286


>sp|SYDND_ARCFU|ASPARTATE--TRNA(ASP/ASN) ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EEIPQAED 8
EEIP ED
Sbjct: 294 EEIPWGED 301


>sp|EF1A_METBF|ELONGATION factor 1-alpha|Methanosarcina barkeri (strain Fusaro /

Query: 1 EEIPQA 6
EEIPQA
Sbjct: 276 EEIPQA 281




125|Sequence|621|630|AEDKLDRLFE

>sp|CHEA_HALS3|CHEMOTAXIS protein CheA|Halobacterium salinarum (strain ATCC 29341

Query: 3 DKLDRLFE 10
D++DR+FE
Sbjct: 82 DRMDRIFE 89


>sp|CMR1_SACS2|CRISPR system CMR subunit Cmr1|Saccharolobus solfataricus (strain ATCC

Query: 3 DKLDRLFE 10
D +DRLFE
Sbjct: 65 DSIDRLFE 72


>sp|TRM56_HALMA|TRNA (cytidine(56)-2'-O)-methyltransferase|Haloarcula marismortui

Query: 5 LDRLFE 10
LDRLFE
Sbjct: 145 LDRLFE 150


>sp|SYE_STAMF|GLUTAMATE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 3 DKLDRLFE 10
++LDR+FE
Sbjct: 212 EELDRIFE 219


>sp|SYFB_HALLT|PHENYLALANINE--TRNA ligase beta subunit|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 AEDKLDRL 8
A D+LDRL
Sbjct: 50 APDRLDRL 57


>sp|SYFB_NATPD|PHENYLALANINE--TRNA ligase beta subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 1 AEDKLDRL 8
A D+LDRL
Sbjct: 50 APDRLDRL 57


>sp|SYFB_HALMA|PHENYLALANINE--TRNA ligase beta subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 AEDKLDRL 8
A D+LDRL
Sbjct: 50 APDRLDRL 57


>sp|TRM56_META3|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanococcus aeolicus

Query: 5 LDRLFE 10
LDRLFE
Sbjct: 148 LDRLFE 153




126|Sequence|626|635|DRLFEIIGVK

>sp|THRC_METAC|THREONINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DRLFEIIGVK 10
DRL E IG+K
Sbjct: 79 DRLAEKIGIK 88


>sp|CAPPA_PYRAE|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DRLFEIIGVK 10
D F+I+G+K
Sbjct: 420 DNAFDILGIK 429


>sp|Y1421_ARCFU|UPF0182 protein AF_1421|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DRLFEIIGV 9
+R+F+I+GV
Sbjct: 266 ERVFQIVGV 274


>sp|CDPAS_METAC|CDP-ARCHAEOL synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 RLFEIIGVK 10
R FEI+G+K
Sbjct: 62 RGFEIMGIK 70


>sp|Y372_PYRAE|UPF0284 protein PAE0372|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 LFEIIGVK 10
L EI+GVK
Sbjct: 265 LMEIVGVK 272


>sp|IF2P_HALWD|PROBABLE translation initiation factor IF-2|Haloquadratum walsbyi (strain

Query: 1 DRLFEIIG 8
+RL+E+IG
Sbjct: 191 ERLYELIG 198


>sp|Y946_ARCFU|UNCHARACTERIZED protein AF_0946|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DRLFEIIGV 9
D+L EI+G+
Sbjct: 838 DKLIEILGL 846


>sp|D89S1_ARCFU|DAMAGE-CONTROL phosphatase AF_1104|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RLFEIIGVK 10
R++EI+GV+
Sbjct: 60 RVYEILGVE 68


>sp|Y875_PYRAE|PROTEIN PAE0875|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DRLFEIIGVK 10
DRL E+I +K
Sbjct: 247 DRLIELIKLK 256


>sp|IF2A_THEVO|TRANSLATION initiation factor 2 subunit|Thermoplasma volcanium (strain ATCC

Query: 1 DRLFEIIGVK 10
D+LFEI+ K
Sbjct: 102 DKLFEIVCSK 111


>sp|GATD_PYRAE|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Pyrobaculum aerophilum (strain ATCC

Query: 1 DRLFEIIG 8
D LFE++G
Sbjct: 102 DYLFEVLG 109


>sp|IF2A_THEAC|TRANSLATION initiation factor 2 subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 DRLFEII 7
D+LFEI+
Sbjct: 102 DKLFEIV 108


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 1 DRLFEIIGVK 10
DR+ +IGVK
Sbjct: 52 DRVENLIGVK 61


>sp|Y1626_METJA|UNCHARACTERIZED protein MJ1626|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RLFEIIGVK 10
R E+IGVK
Sbjct: 508 RTMELIGVK 516


>sp|IF2P_HALMA|PROBABLE translation initiation factor IF-2|Haloarcula marismortui (strain

Query: 1 DRLFEIIG 8
++L+EIIG
Sbjct: 172 EKLYEIIG 179




127|Sequence|631|640|IIGVKSQEAS

>sp|KAD6_SACS2|PUTATIVE adenylate kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IIGVKSQEA 9
I+GV SQEA
Sbjct: 119 ILGVISQEA 127


>sp|KAD6_SACI7|PUTATIVE adenylate kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 IIGVKSQEA 9
I+GV SQEA
Sbjct: 119 ILGVISQEA 127


>sp|KAD6_SACI6|PUTATIVE adenylate kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 IIGVKSQEA 9
I+GV SQEA
Sbjct: 119 ILGVISQEA 127


>sp|KAD6_SACI4|PUTATIVE adenylate kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 IIGVKSQEA 9
I+GV SQEA
Sbjct: 119 ILGVISQEA 127


>sp|KAD6_SACI1|PUTATIVE adenylate kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 IIGVKSQEA 9
I+GV SQEA
Sbjct: 119 ILGVISQEA 127


>sp|KAD6_SACI3|PUTATIVE adenylate kinase|Saccharolobus islandicus (strain M.16.27)

Query: 1 IIGVKSQEA 9
I+GV SQEA
Sbjct: 119 ILGVISQEA 127


>sp|KAD6_SACI2|PUTATIVE adenylate kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 IIGVKSQEA 9
I+GV SQEA
Sbjct: 119 ILGVISQEA 127


>sp|AATB_PYRCJ|A-TYPE ATP synthase subunit B|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 IGVKSQEA 9
IG+K++EA
Sbjct: 187 IGIKTEEA 194




128|Sequence|636|645|SQEASQTLLD

>sp|PYRB_METLZ|ASPARTATE carbamoyltransferase catalytic subunit|Methanocorpusculum labreanum

Query: 2 QEASQTLLD 10
Q SQTLLD
Sbjct: 131 QHPSQTLLD 139


>sp|PYRB_HALLT|ASPARTATE carbamoyltransferase catalytic subunit|Halorubrum lacusprofundi

Query: 1 SQEASQTLLD 10
Q SQTLLD
Sbjct: 129 GQHPSQTLLD 138


>sp|PYRB_META3|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcus aeolicus

Query: 1 SQEASQTLLD 10
+Q SQT+LD
Sbjct: 129 NQHPSQTMLD 138


>sp|PYRB_METMJ|ASPARTATE carbamoyltransferase catalytic subunit|Methanoculleus marisnigri

Query: 2 QEASQTLLD 10
Q SQTLLD
Sbjct: 127 QHPSQTLLD 135


>sp|DNAG_NATPD|DNA primase DnaG|Natronomonas pharaonis (strain ATCC 35678

Query: 3 EASQTLLD 10
EASQ LLD
Sbjct: 463 EASQRLLD 470


>sp|PYRB_METPE|ASPARTATE carbamoyltransferase catalytic subunit|Methanosphaerula palustris

Query: 2 QEASQTLLD 10
Q SQTLLD
Sbjct: 127 QHPSQTLLD 135


>sp|PYRB_METMP|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcus maripaludis

Query: 1 SQEASQTLLD 10
+Q +QTLLD
Sbjct: 129 NQHPTQTLLD 138


>sp|PYRB_METM7|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcus maripaludis

Query: 1 SQEASQTLLD 10
+Q +QTLLD
Sbjct: 129 NQHPTQTLLD 138


>sp|PYRB_METJA|ASPARTATE carbamoyltransferase catalytic subunit|Methanocaldococcus

Query: 1 SQEASQTLLD 10
+Q +QTLLD
Sbjct: 129 NQHPTQTLLD 138


>sp|PYRB_METM6|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcus maripaludis

Query: 1 SQEASQTLLD 10
+Q +QTLLD
Sbjct: 129 NQHPTQTLLD 138


>sp|PYRB_METM5|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcus maripaludis

Query: 1 SQEASQTLLD 10
+Q +QTLLD
Sbjct: 129 NQHPTQTLLD 138


>sp|PYRB_THEON|ASPARTATE carbamoyltransferase catalytic subunit|Thermococcus onnurineus

Query: 1 SQEASQTLLD 10
+Q +QTLLD
Sbjct: 133 NQHPTQTLLD 142


>sp|PYRB_THEGJ|ASPARTATE carbamoyltransferase catalytic subunit|Thermococcus gammatolerans

Query: 1 SQEASQTLLD 10
+Q +QTLLD
Sbjct: 133 NQHPTQTLLD 142


>sp|PYRB_METHJ|ASPARTATE carbamoyltransferase catalytic subunit|Methanospirillum hungatei

Query: 2 QEASQTLLD 10
Q SQTL+D
Sbjct: 127 QHPSQTLID 135


>sp|PYRB_PYRAB|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus abyssi (strain

Query: 1 SQEASQTLLD 10
+Q +QTLLD
Sbjct: 133 NQHPTQTLLD 142


>sp|PYRB_THEKO|ASPARTATE carbamoyltransferase catalytic subunit|Thermococcus kodakarensis

Query: 1 SQEASQTLLD 10
+Q +QTLLD
Sbjct: 133 NQHPTQTLLD 142




129|Sequence|641|655|QTLLDSVYSHLPDLL

>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 1 QTLLDSVYSHLPD 13
Q +LD V HLPD
Sbjct: 768 QVVLDMVVKHLPD 780


>sp|EF2_METPE|ELONGATION factor 2|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 LLDSVYSHLPD 13
LLD V HLPD
Sbjct: 248 LLDMVVKHLPD 258


>sp|IF2B_METST|TRANSLATION initiation factor 2 subunit|Methanosphaera stadtmanae (strain

Query: 1 QTLLDSVYSHLPD 13
+ LLD Y LPD
Sbjct: 12 EKLLDQAYEQLPD 24


>sp|IF2B_SULAC|TRANSLATION initiation factor 2 subunit|Sulfolobus acidocaldarius (strain

Query: 1 QTLLDSVYSHLPD 13
+ LLD +Y LPD
Sbjct: 10 EQLLDRLYDRLPD 22


>sp|AMASY_HALMA|APPARENT malate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 TLLDSVYSHLPD 13
TL VY H PD
Sbjct: 402 TLFQDVYEHRPD 413


>sp|IF2B_SULTO|TRANSLATION initiation factor 2 subunit|Sulfurisphaera tokodaii (strain DSM

Query: 3 LLDSVYSHLPD 13
LLD +YS LP+
Sbjct: 10 LLDRLYSKLPE 20


>sp|EF2_META3|ELONGATION factor 2|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 LLDSVYSHLPD 13
LLD V +HLP+
Sbjct: 248 LLDMVVTHLPN 258


>sp|EF2_METMJ|ELONGATION factor 2|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 LLDSVYSHLPDLL 15
LLD V HLP+ L
Sbjct: 248 LLDMVVKHLPNPL 260


>sp|HELS_SACS2|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 LDSVYSHLPDLL 15
LDS++ H PD L
Sbjct: 125 LDSLWRHRPDWL 136


>sp|HELS_SACI5|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus islandicus (strain REY15A)

Query: 4 LDSVYSHLPDLL 15
LDS++ H PD L
Sbjct: 132 LDSLWRHRPDWL 143


>sp|EF2_KORCO|ELONGATION factor 2|Korarchaeum cryptofilum (strain OPF8)

Query: 1 QTLLDSVYSHLPD 13
+ LLD V H+PD
Sbjct: 247 EALLDMVALHVPD 259


>sp|EF2_ARCFU|ELONGATION factor 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QTLLDSVYSHLP 12
Q +LD V HLP
Sbjct: 244 QVVLDMVIRHLP 255


>sp|TDXH2_THEAC|PEROXIREDOXIN 2|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 LDSVYSHL 11
+DSVYSH+
Sbjct: 66 IDSVYSHI 73


>sp|Y863_ARCFU|UNCHARACTERIZED protein AF_0863|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TLLDSVYSHLPDL 14
TLL ++Y+ +P+L
Sbjct: 40 TLLSAIYAIMPEL 52


>sp|HEM1_METAC|GLUTAMYL-TRNA reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 LDSVYSHLPD 13
LD + HLPD
Sbjct: 224 LDDIRGHLPD 233


>sp|IF2B_SACS2|TRANSLATION initiation factor 2 subunit|Saccharolobus solfataricus (strain

Query: 3 LLDSVYSHLPD 13
+LD +YS LP+
Sbjct: 10 MLDRLYSKLPE 20


>sp|IF2B_SACI7|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 3 LLDSVYSHLPD 13
+LD +YS LP+
Sbjct: 10 MLDRLYSKLPE 20


>sp|IF2B_SACI6|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 3 LLDSVYSHLPD 13
+LD +YS LP+
Sbjct: 10 MLDRLYSKLPE 20


>sp|IF2B_SACI4|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 3 LLDSVYSHLPD 13
+LD +YS LP+
Sbjct: 10 MLDRLYSKLPE 20


>sp|IF2B_SACI3|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 3 LLDSVYSHLPD 13
+LD +YS LP+
Sbjct: 10 MLDRLYSKLPE 20


>sp|IF2B_SACI2|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 3 LLDSVYSHLPD 13
+LD +YS LP+
Sbjct: 10 MLDRLYSKLPE 20


>sp|IF2B_SACI1|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 3 LLDSVYSHLPD 13
+LD +YS LP+
Sbjct: 10 MLDRLYSKLPE 20


>sp|SIHH_METKA|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanopyrus kandleri (strain AV19 /

Query: 4 LDSVYSHLPDLL 15
+D V SH PD++
Sbjct: 116 IDRVLSHEPDII 127


>sp|AATE_METMJ|A-TYPE ATP synthase subunit E|Methanoculleus marisnigri (strain ATCC

Query: 1 QTLLDSVYS 9
+TLLD VYS
Sbjct: 79 KTLLDQVYS 87


>sp|EF2_METB6|ELONGATION factor 2|Methanoregula boonei (strain DSM 21154

Query: 1 QTLLDSVYSHLPDLL 15
+ +LD V HLP+ L
Sbjct: 246 EVVLDMVVHHLPNPL 260


>sp|IF2B_THEKO|TRANSLATION initiation factor 2 subunit|Thermococcus kodakarensis (strain

Query: 1 QTLLDSVYSHLPD 13
+ LLD Y LP+
Sbjct: 11 EKLLDKAYEELPE 23


>sp|RAD50_SULTO|DNA double-strand break repair Rad50|Sulfurisphaera tokodaii (strain

Query: 1 QTLLDSVYSHLPDL 14
Q ++SV+ +LPD+
Sbjct: 139 QGKIESVFENLPDV 152


>sp|IF2B_THEGJ|TRANSLATION initiation factor 2 subunit|Thermococcus gammatolerans (strain

Query: 1 QTLLDSVYSHLPD 13
+ LLD Y LP+
Sbjct: 11 ERLLDKAYEELPE 23


>sp|TDXH2_SULME|PEROXIREDOXIN 2|Sulfuracidifex metallicus (Sulfolobus metallicus)

Query: 4 LDSVYSHL 11
+DSVYSH+
Sbjct: 71 VDSVYSHI 78


>sp|EF2_THEKO|ELONGATION factor 2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 LLDSVYSHLPDLL 15
+LD V HLP+ L
Sbjct: 248 VLDMVVKHLPNPL 260


>sp|EF2_METM6|ELONGATION factor 2|Methanococcus maripaludis (strain C6 /

Query: 1 QTLLDSVYSHLPDLL 15
+ +LD +HLP+ L
Sbjct: 246 EVILDMAITHLPNPL 260


>sp|TRPE_HALVD|ANTHRANILATE synthase component 1|Haloferax volcanii (strain ATCC 29605

Query: 3 LLDSVYSHLPDL 14
+LDS+ LPDL
Sbjct: 119 VLDSLRGALPDL 130


>sp|EF2_METJA|ELONGATION factor 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QTLLDSVYSHLP 12
+ +LD V HLP
Sbjct: 246 EVVLDMVIKHLP 257


>sp|EF2_THEON|ELONGATION factor 2|Thermococcus onnurineus (strain NA1)

Query: 3 LLDSVYSHLPDLL 15
+LD V HLP+ L
Sbjct: 248 VLDMVVRHLPNPL 260


>sp|EF2_THEGJ|ELONGATION factor 2|Thermococcus gammatolerans (strain DSM 15229

Query: 3 LLDSVYSHLPDLL 15
+LD V HLP+ L
Sbjct: 248 VLDMVVRHLPNPL 260


>sp|MPTA_METTH|GTP cyclohydrolase MptA|Methanothermobacter thermautotrophicus (strain

Query: 6 SVYSHLPD 13
S Y HLPD
Sbjct: 269 SEYPHLPD 276


>sp|TDXH1_SULTO|PEROXIREDOXIN 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 LDSVYSHLPDLL 15
+DS+YSH+ L+
Sbjct: 72 VDSIYSHIQWLM 83


>sp|EF2_PYRAB|ELONGATION factor 2|Pyrococcus abyssi (strain GE5 /

Query: 3 LLDSVYSHLPD 13
+LD V HLP+
Sbjct: 248 VLDMVVKHLPN 258


>sp|TDXH1_SULME|PEROXIREDOXIN 1|Sulfuracidifex metallicus (Sulfolobus metallicus)

Query: 4 LDSVYSHL 11
+DS+YSH+
Sbjct: 71 VDSIYSHI 78


>sp|MVHG_METTM|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter marburgensis (strain

Query: 3 LLDSVYSHLPDL 14
L+D+ Y +P+L
Sbjct: 44 LMDTKYDEIPEL 55


>sp|MVHG_METTH|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter thermautotrophicus

Query: 3 LLDSVYSHLPDL 14
L+D+ Y +P+L
Sbjct: 44 LMDTKYDEIPEL 55


>sp|GLGB_PICTO|1,4-ALPHA-GLUCAN branching enzyme GlgB|Picrophilus torridus (strain ATCC 700027

Query: 3 LLDSVYSHLPD 13
+LD V +H PD
Sbjct: 321 ILDFVPAHFPD 331


>sp|NEP1_THEON|RIBOSOMAL RNA small subunit methyltransferase|Thermococcus onnurineus

Query: 1 QTLLDSVYSH 10
+ LLDS Y H
Sbjct: 37 EVLLDSTYHH 46


>sp|HELS_SACS9|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain 98/2)

Query: 4 LDSVYSHLPDLL 15
LDS++ H P+ L
Sbjct: 132 LDSLWRHRPEWL 143


>sp|RL6_THEON|LARGE ribosomal subunit protein uL6|Thermococcus onnurineus (strain

Query: 4 LDSVYSHLP 12
L VYSH P
Sbjct: 90 LKVVYSHFP 98


>sp|RL6_THEKO|LARGE ribosomal subunit protein uL6|Thermococcus kodakarensis (strain

Query: 4 LDSVYSHLP 12
L VYSH P
Sbjct: 90 LKVVYSHFP 98


>sp|RL6_THEGJ|LARGE ribosomal subunit protein uL6|Thermococcus gammatolerans (strain

Query: 4 LDSVYSHLP 12
L VYSH P
Sbjct: 90 LKVVYSHFP 98


>sp|RL6_PYRHO|LARGE ribosomal subunit protein uL6|Pyrococcus horikoshii (strain ATCC

Query: 4 LDSVYSHLP 12
L VYSH P
Sbjct: 90 LKVVYSHFP 98


>sp|RL6_PYRFU|LARGE ribosomal subunit protein uL6|Pyrococcus furiosus (strain ATCC

Query: 4 LDSVYSHLP 12
L VYSH P
Sbjct: 90 LKVVYSHFP 98


>sp|RL6_PYRAB|LARGE ribosomal subunit protein uL6|Pyrococcus abyssi (strain GE5 /

Query: 4 LDSVYSHLP 12
L VYSH P
Sbjct: 90 LKVVYSHFP 98


>sp|DAPF_METTH|DIAMINOPIMELATE epimerase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 QTLLDSVYSHLP 12
+ L DSV HLP
Sbjct: 240 EKLDDSVLVHLP 251


>sp|TDXH_THEVO|PEROXIREDOXIN volcanium (strain ATCC 51530

Query: 4 LDSVYSHL 11
+DSV+SH+
Sbjct: 70 IDSVFSHI 77


>sp|TDXH_METMA|PEROXIREDOXIN mazei (strain ATCC BAA-159

Query: 4 LDSVYSHL 11
+DSV+SH+
Sbjct: 70 IDSVFSHI 77


>sp|SYC_AERPE|CYSTEINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 TLLDSVYSHLPDLL 15
T +SVY+ PD++
Sbjct: 400 TGFNSVYAFAPDIV 413


>sp|EF2_THESM|ELONGATION factor 2|Thermococcus sibiricus (strain DSM 12597

Query: 3 LLDSVYSHLPD 13
+LD V HLP+
Sbjct: 248 VLDMVVRHLPN 258


>sp|EF2_METVS|ELONGATION factor 2|Methanococcus vannielii (strain ATCC 35089

Query: 1 QTLLDSVYSHLPDLL 15
+ +LD HLP+ L
Sbjct: 246 EVILDMAIKHLPNPL 260


>sp|EF2_METM7|ELONGATION factor 2|Methanococcus maripaludis (strain C7 /

Query: 1 QTLLDSVYSHLPDLL 15
+ +LD HLP+ L
Sbjct: 246 EVILDMAIKHLPNPL 260


>sp|EF2_NANEQ|ELONGATION factor 2|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 QTLLDSVYSHLP 12
+ +LD V HLP
Sbjct: 251 RVVLDMVVRHLP 262


>sp|RL6_HYPBU|LARGE ribosomal subunit protein uL6|Hyperthermus butylicus (strain DSM

Query: 4 LDSVYSHLP 12
L VYSH P
Sbjct: 95 LKIVYSHFP 103


>sp|TRI_SACS2|TRICORN protease homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 8 YSHLPDLL 15
Y H+PD++
Sbjct: 890 YIHIPDMM 897


>sp|EF2_DESA1|ELONGATION factor 2|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 QTLLDSVYSHLPD 13
+ +LD V H+P+
Sbjct: 247 EAILDMVVKHIPN 259


>sp|TRM1_METPE|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaerula palustris

Query: 3 LLDSVYSHLPDL 14
LLD + LPDL
Sbjct: 279 LLDQMKERLPDL 290


>sp|RL6_METKA|LARGE ribosomal subunit protein uL6|Methanopyrus kandleri (strain AV19 /

Query: 4 LDSVYSHLP 12
L VYSH P
Sbjct: 107 LKLVYSHFP 115


>sp|XYLG_SULAC|XYLOSE/ARABINOSE import ATP-binding protein XylG|Sulfolobus acidocaldarius (strain

Query: 3 LLDSVYSHLPDL 14
LLDS+ +PD+
Sbjct: 124 LLDSLQIRIPDI 135


>sp|AROD_PYRFU|3-DEHYDROQUINATE dehydratase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QTLLDSVYSHLPDLL 15
Q++LDS+ PD++
Sbjct: 126 QSILDSMIELEPDII 140


>sp|RS17_AERPE|SMALL ribosomal subunit protein uS17|Aeropyrum pernix (strain ATCC

Query: 7 VYSHLPDLL 15
+++HLPD +
Sbjct: 76 IHAHLPDCI 84


>sp|NEP1_THEKO|RIBOSOMAL RNA small subunit methyltransferase|Thermococcus kodakarensis

Query: 1 QTLLDSVYSH-----LPD 13
+ +LDS Y H LPD
Sbjct: 37 EAILDSTYHHAALKKLPD 54


>sp|SYA_PYRIL|ALANINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 TLLDSVYSH 10
T+ D+V+SH
Sbjct: 247 TIYDAVFSH 255


>sp|IF6_THEPD|TRANSLATION initiation factor 6|Thermofilum pendens (strain DSM 2475

Query: 1 QTLLDSVYSHLPDLL 15
+ +LDS HL LL
Sbjct: 74 RVILDSELEHLKSLL 88


>sp|SYDND_METBF|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina barkeri (strain Fusaro /

Query: 10 HLPDLL 15
H+PDLL
Sbjct: 376 HIPDLL 381


>sp|COFH_METKA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanopyrus kandleri (strain AV19 /

Query: 3 LLDSVYSHLPDL 14
+LD + S PD+
Sbjct: 129 MLDEIKSQAPDI 140


>sp|ENO_PICTO|ENOLASE torridus (strain ATCC 700027

Query: 1 QTLLDSVYSHL 11
+T+LDS+Y ++
Sbjct: 163 KTVLDSIYYNI 173


>sp|GUAAB_METJA|GMP synthase [glutamine-hydrolyzing] subunit B|Methanocaldococcus

Query: 4 LDSVYSHLPDL 14
LD++ +H+P++
Sbjct: 263 LDAMTAHVPEI 273


>sp|Y352_METJA|UNCHARACTERIZED protein MJ0352|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LLDSVYSHLP 12
LLD HLP
Sbjct: 112 LLDEANEHLP 121


>sp|TDXH_AERPE|PEROXIREDOXIN pernix (strain ATCC 700893

Query: 4 LDSVYSHL 11
+DSV+SH+
Sbjct: 76 VDSVFSHI 83


>sp|EF2_PYRWO|ELONGATION factor 2|Pyrococcus woesei

Query: 3 LLDSVYSHLP 12
+LD V HLP
Sbjct: 248 VLDMVVRHLP 257


>sp|EF2_PYRHO|ELONGATION factor 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 LLDSVYSHLP 12
+LD V HLP
Sbjct: 248 VLDMVVRHLP 257


>sp|EF2_PYRFU|ELONGATION factor 2|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LLDSVYSHLP 12
+LD V HLP
Sbjct: 248 VLDMVVRHLP 257


>sp|NEP1_THESM|RIBOSOMAL RNA small subunit methyltransferase|Thermococcus sibiricus

Query: 1 QTLLDSVYSH 10
+ LLDS Y H
Sbjct: 37 EILLDSTYHH 46


>sp|TRIC_SULTO|PUTATIVE Tricorn-like protease C-terminal subunit|Sulfurisphaera tokodaii

Query: 8 YSHLPDLL 15
Y H+PD++
Sbjct: 672 YVHIPDMM 679


>sp|TDXH_METJA|PEROXIREDOXIN jannaschii (strain ATCC 43067

Query: 4 LDSVYSHL 11
+D V+SHL
Sbjct: 72 IDQVFSHL 79


>sp|RL7A_METKA|LARGE ribosomal subunit protein eL8|Methanopyrus kandleri (strain AV19

Query: 5 DSVYSHLPDL 14
+ V +HLP+L
Sbjct: 60 EEVVAHLPEL 69


>sp|UREG_HALMA|UREASE accessory protein UreG|Haloarcula marismortui (strain ATCC 43049

Query: 1 QTLLDSVYSHLPD 13
+T +D+V SH+ D
Sbjct: 190 ETNIDTVLSHVRD 202


>sp|TREZ_SACSO|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (Sulfolobus

Query: 3 LLDSVYSHL 11
+LD VY+H+
Sbjct: 186 ILDVVYNHV 194


>sp|TREZ_SACS2|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LLDSVYSHL 11
+LD VY+H+
Sbjct: 188 ILDVVYNHV 196


>sp|HUTI_HALMA|IMIDAZOLONEPROPIONASE marismortui (strain ATCC 43049

Query: 1 QTLLDSVYSHLPDLL 15
+TLL ++ +HL +L
Sbjct: 122 ETLLSNLLAHLDTML 136


>sp|IORB_METTM|INDOLEPYRUVATE oxidoreductase subunit IorB|Methanothermobacter marburgensis

Query: 1 QTLLDSVYSHLP 12
+TL++S+ ++LP
Sbjct: 164 ETLIESMKNNLP 175


>sp|NADB_PYRFU|L-ASPARTATE oxidase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 DSVYSHLPDLL 15
DS+ SH+ D +
Sbjct: 53 DSIISHVTDTI 63




130|Sequence|646|655|SVYSHLPDLL

>sp|MPTA_METTH|GTP cyclohydrolase MptA|Methanothermobacter thermautotrophicus (strain

Query: 1 SVYSHLPD 8
S Y HLPD
Sbjct: 269 SEYPHLPD 276


>sp|RS17_AERPE|SMALL ribosomal subunit protein uS17|Aeropyrum pernix (strain ATCC

Query: 2 VYSHLPDLL 10
+++HLPD +
Sbjct: 76 IHAHLPDCI 84


>sp|TRI_SACS2|TRICORN protease homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 YSHLPDLL 10
Y H+PD++
Sbjct: 890 YIHIPDMM 897


>sp|SYDND_METBF|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina barkeri (strain Fusaro /

Query: 5 HLPDLL 10
H+PDLL
Sbjct: 376 HIPDLL 381


>sp|RL6_THEON|LARGE ribosomal subunit protein uL6|Thermococcus onnurineus (strain

Query: 2 VYSHLP 7
VYSH P
Sbjct: 93 VYSHFP 98


>sp|RL6_THEKO|LARGE ribosomal subunit protein uL6|Thermococcus kodakarensis (strain

Query: 2 VYSHLP 7
VYSH P
Sbjct: 93 VYSHFP 98


>sp|RL6_THEGJ|LARGE ribosomal subunit protein uL6|Thermococcus gammatolerans (strain

Query: 2 VYSHLP 7
VYSH P
Sbjct: 93 VYSHFP 98


>sp|RL6_PYRHO|LARGE ribosomal subunit protein uL6|Pyrococcus horikoshii (strain ATCC

Query: 2 VYSHLP 7
VYSH P
Sbjct: 93 VYSHFP 98


>sp|RL6_PYRFU|LARGE ribosomal subunit protein uL6|Pyrococcus furiosus (strain ATCC

Query: 2 VYSHLP 7
VYSH P
Sbjct: 93 VYSHFP 98


>sp|RL6_PYRAB|LARGE ribosomal subunit protein uL6|Pyrococcus abyssi (strain GE5 /

Query: 2 VYSHLP 7
VYSH P
Sbjct: 93 VYSHFP 98


>sp|RL6_METTP|LARGE ribosomal subunit protein uL6|Methanothrix thermoacetophila

Query: 2 VYSHLP 7
VYSH P
Sbjct: 91 VYSHFP 96


>sp|RL6_METKA|LARGE ribosomal subunit protein uL6|Methanopyrus kandleri (strain AV19 /

Query: 2 VYSHLP 7
VYSH P
Sbjct: 110 VYSHFP 115


>sp|RL6_METHJ|LARGE ribosomal subunit protein uL6|Methanospirillum hungatei JF-1

Query: 2 VYSHLP 7
VYSH P
Sbjct: 89 VYSHFP 94


>sp|RL6_METBU|LARGE ribosomal subunit protein uL6|Methanococcoides burtonii (strain

Query: 2 VYSHLP 7
VYSH P
Sbjct: 91 VYSHFP 96


>sp|RL6_HYPBU|LARGE ribosomal subunit protein uL6|Hyperthermus butylicus (strain DSM

Query: 2 VYSHLP 7
VYSH P
Sbjct: 98 VYSHFP 103


>sp|TRIC_SULTO|PUTATIVE Tricorn-like protease C-terminal subunit|Sulfurisphaera tokodaii

Query: 3 YSHLPDLL 10
Y H+PD++
Sbjct: 672 YVHIPDMM 679


>sp|RAD50_SULTO|DNA double-strand break repair Rad50|Sulfurisphaera tokodaii (strain

Query: 1 SVYSHLPDL 9
SV+ +LPD+
Sbjct: 144 SVFENLPDV 152


>sp|AMASY_HALMA|APPARENT malate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 VYSHLPD 8
VY H PD
Sbjct: 407 VYEHRPD 413


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 YSHLPDL 9
Y H+PD+
Sbjct: 881 YIHIPDM 887


>sp|GVPE_HALMT|TRANSCRIPTIONAL activator GvpE|Haloferax mediterranei (strain ATCC 33500

Query: 1 SVYSHLPDL 9
+VY HL DL
Sbjct: 119 TVYPHLNDL 127


>sp|SYC_AERPE|CYSTEINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 SVYSHLPDLL 10
SVY+ PD++
Sbjct: 404 SVYAFAPDIV 413


>sp|TRI_THEVO|TRICORN protease|Thermoplasma volcanium (strain ATCC 51530

Query: 3 YSHLPDL 9
Y H+PD+
Sbjct: 842 YIHIPDM 848


>sp|PYRB_THEVO|ASPARTATE carbamoyltransferase catalytic subunit|Thermoplasma volcanium

Query: 2 VYSHLPD 8
VYS LPD
Sbjct: 197 VYSMLPD 203


>sp|GVPE1_HALSA|TRANSCRIPTIONAL activator GvpE1|Halobacterium salinarum (strain ATCC 700922

Query: 1 SVYSHLPDL 9
+VY HL DL
Sbjct: 119 TVYPHLNDL 127






THE END