1|SequenceR|10|1|ATDEPPQSAM
>sp|1104L_ASFPP|PROTEIN MGF 110-4L|African swine fever virus (isolate
Query: 1 ATDEPPQSAM 10
+TD PPQ +
Sbjct: 29 STDNPPQEEL 38
>sp|1104L_ASFM2|PROTEIN MGF 110-4L|African swine fever virus (isolate
Query: 1 ATDEPPQSAM 10
+TD PPQ +
Sbjct: 29 STDNPPQEEL 38
>sp|1104L_ASFL5|PROTEIN MGF 110-4L|African swine fever virus (isolate
Query: 1 ATDEPPQSAM 10
+TD PPQ +
Sbjct: 29 STDNPPQEEL 38
>sp|1104L_ASFB7|PROTEIN MGF 110-4L|African swine fever virus (strain
Query: 1 ATDEPPQSAM 10
+TD PPQ +
Sbjct: 29 STDNPPQEEL 38
>sp|1104L_ASFWA|PROTEIN MGF 110-4L|African swine fever virus (isolate
Query: 1 ATDEPPQSAM 10
+TD PPQ +
Sbjct: 30 STDNPPQEEL 39
>sp|1104B_ASFL5|PROTEIN MGF 110-4L-B|African swine fever virus (isolate
Query: 1 ATDEPPQSAM 10
+TD PPQ +
Sbjct: 29 STDNPPQEEL 38
>sp|1104L_ASFP4|PROTEIN MGF 110-4L|African swine fever virus (isolate
Query: 1 ATDEPPQSAM 10
+TD PPQ +
Sbjct: 29 STDNPPQEEL 38
>sp|1105L_ASFPP|PROTEIN MGF 110-5L|African swine fever virus (isolate
Query: 1 ATDEPPQSAM 10
+TD PPQ +
Sbjct: 29 STDNPPQEEL 38
2|SequenceR|15|6|SAQSEATDEP
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 AQSEATDEP 10
AQ+E DEP
Sbjct: 1668 AQAEVEDEP 1676
>sp|RDRP_PMV|RNA replication protein|Papaya mosaic potexvirus (PMV)
Query: 1 SAQSEATDEP 10
+ ++EATDEP
Sbjct: 477 AKEAEATDEP 486
3|SequenceR|20|11|CELEDSAQSE
>sp|Y021_NPVOP|UNCHARACTERIZED 34.7 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis
Query: 2 ELEDSAQS 9
ELEDSA S
Sbjct: 42 ELEDSAHS 49
>sp|HMUDK_BPS10|5-HMDU DNA kinase|Bacillus phage SP10 (Bacillus phage
Query: 1 CELEDSAQSE 10
C LEDS +S+
Sbjct: 371 CNLEDSYESK 380
4|SequenceR|25|16|NYCIKCELED
>sp|P20_BYVU|20 kDa protein|Beet yellows virus (isolate Ukraine)
Query: 2 YCIKCELE 9
YC+ CEL+
Sbjct: 152 YCLNCELD 159
>sp|Y057_NPVOP|UNCHARACTERIZED 18.9 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis
Query: 1 NYCIKCEL 8
N+C++C++
Sbjct: 46 NFCVECDM 53
>sp|L_MOBVC|RNA-DIRECTED RNA polymerase L|Mobala mammarenavirus (isolate Rat/Central African
Query: 1 NYCIKCELE 9
NYCI C E
Sbjct: 1313 NYCISCLYE 1321
>sp|VNBP_ICRSV|23KDA protein|Indian citrus ringspot virus (isolate
Query: 1 NYCIKC 6
NYC KC
Sbjct: 159 NYCYKC 164
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 CIKCELED 10
C+ C LED
Sbjct: 226 CVPCVLED 233
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 5 KCELED 10
+CELED
Sbjct: 649 RCELED 654
>sp|VG90_GAHVM|UNCHARACTERIZED gene 90 protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 2 YCIKCELED 10
+CI C +E+
Sbjct: 261 HCISCNIEN 269
>sp|U1053_GAHVG|UNCHARACTERIZED 40.6 kDa protein|Gallid herpesvirus 2 (strain GA)
Query: 2 YCIKCELED 10
+CI C +E+
Sbjct: 261 HCISCNIEN 269
>sp|YR212_MIMIV|UNCHARACTERIZED protein R212|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 NYCIKCELED 10
NY +K ELED
Sbjct: 240 NYFLKEELED 249
>sp|R1A_BEV|REPLICASE polyprotein 1a|Berne virus (BEV)
Query: 1 NYCIKCELED 10
++ I C+LED
Sbjct: 4532 DFAISCKLED 4541
>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)
Query: 1 NYCIKCELED 10
++ I C+LED
Sbjct: 4532 DFAISCKLED 4541
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 CIKCEL 8
CIKC+L
Sbjct: 1151 CIKCDL 1156
>sp|R1A_CVBQ|REPLICASE polyprotein 1a|Bovine coronavirus (strain Quebec) (BCoV)
Query: 3 CIKCEL 8
CIKC+L
Sbjct: 1151 CIKCDL 1156
>sp|R1A_CVBM|REPLICASE polyprotein 1a|Bovine coronavirus (strain Mebus) (BCoV)
Query: 3 CIKCEL 8
CIKC+L
Sbjct: 1151 CIKCDL 1156
>sp|R1A_CVBLU|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)
Query: 3 CIKCEL 8
CIKC+L
Sbjct: 1151 CIKCDL 1156
>sp|R1A_CVBEN|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)
Query: 3 CIKCEL 8
CIKC+L
Sbjct: 1151 CIKCDL 1156
>sp|GP_HAZVJ|ENVELOPMENT polyprotein|Hazara virus (isolate JC280)
Query: 1 NYCIKCE 7
++C+KCE
Sbjct: 523 DFCLKCE 529
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 CIKCEL 8
CIKC+L
Sbjct: 1151 CIKCDL 1156
>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)
Query: 3 CIKCEL 8
CIKC+L
Sbjct: 1151 CIKCDL 1156
>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)
Query: 3 CIKCEL 8
CIKC+L
Sbjct: 1151 CIKCDL 1156
>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)
Query: 3 CIKCEL 8
CIKC+L
Sbjct: 1151 CIKCDL 1156
>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)
Query: 3 CIKCEL 8
CIKC+L
Sbjct: 1151 CIKCDL 1156
>sp|LT_POVMA|LARGE T antigen|Murine polyomavirus (strain A2) (MPyV)
Query: 3 CIKCELED 10
CIKC E+
Sbjct: 452 CIKCSKEE 459
>sp|LT_POVM3|LARGE T antigen|Murine polyomavirus (strain A3) (MPyV)
Query: 3 CIKCELED 10
CIKC E+
Sbjct: 453 CIKCSKEE 460
>sp|LT_POVM1|LARGE T antigen|Mus musculus polyomavirus 1 (MPyV)
Query: 3 CIKCELED 10
CIKC E+
Sbjct: 453 CIKCSKEE 460
>sp|LT_POVBG|LARGE T antigen|Murine polyomavirus (strain BG) (MPyV)
Query: 3 CIKCELED 10
CIKC E+
Sbjct: 453 CIKCSKEE 460
5|SequenceR|30|21|KLNYRNYCIK
>sp|RDRP_SBWMN|REPLICASE large subunit|Soil-borne wheat mosaic virus (strain
Query: 2 LNYRNYCIK 10
L Y NYCIK
Sbjct: 1498 LCYYNYCIK 1506
>sp|HEMA_CDVO|HEMAGGLUTININ glycoprotein|Canine distemper virus (strain Onderstepoort)
Query: 1 KLNYRNYC 8
K+N+ NYC
Sbjct: 147 KVNFTNYC 154
>sp|HEMA_CDVC|HEMAGGLUTININ glycoprotein|Canine distemper virus (strain Convac
Query: 1 KLNYRNYC 8
K+N+ NYC
Sbjct: 147 KVNFTNYC 154
>sp|HEMA_CDVA6|HEMAGGLUTININ glycoprotein|Canine distemper virus (strain A92-6)
Query: 1 KLNYRNYC 8
K+N+ NYC
Sbjct: 147 KVNFTNYC 154
>sp|HEMA_CDVA4|HEMAGGLUTININ glycoprotein|Canine distemper virus (strain A92-27/4)
Query: 1 KLNYRNYC 8
K+N+ NYC
Sbjct: 147 KVNFTNYC 154
>sp|MATRX_RABVN|MATRIX protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 KLNYRNYCI 9
K N RN+CI
Sbjct: 47 KKNMRNFCI 55
>sp|MATRX_RABVH|MATRIX protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 KLNYRNYCI 9
K N RN+CI
Sbjct: 47 KKNMRNFCI 55
>sp|MATRX_RABVD|MATRIX protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 KLNYRNYCI 9
K N RN+CI
Sbjct: 47 KKNMRNFCI 55
>sp|MATRX_KHUV|MATRIX protein|Khujand virus (KHUV)
Query: 1 KLNYRNYCI 9
K N RN+CI
Sbjct: 47 KKNMRNFCI 55
>sp|MATRX_EBLV1|MATRIX protein|European bat lyssavirus 1 (strain
Query: 1 KLNYRNYCI 9
K N RN+CI
Sbjct: 47 KKNMRNFCI 55
>sp|MATRX_RABVI|MATRIX protein|Rabies virus (strain India) (RABV)
Query: 1 KLNYRNYCI 9
K N RN+CI
Sbjct: 47 KKNMRNFCI 55
>sp|MATRX_ABLVH|MATRIX protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 1 KLNYRNYCI 9
K N RN+CI
Sbjct: 47 KRNMRNFCI 55
>sp|MATRX_RABVS|MATRIX protein|Rabies virus (strain SAD B19)
Query: 1 KLNYRNYCI 9
K N RN+CI
Sbjct: 47 KKNMRNFCI 55
>sp|MATRX_RABVE|MATRIX protein|Rabies virus (strain ERA) (RABV)
Query: 1 KLNYRNYCI 9
K N RN+CI
Sbjct: 47 KKNMRNFCI 55
>sp|DPOL_ASHV|PROTEIN P|Arctic squirrel hepatitis virus (ASHV)
Query: 2 LNYRNYC 8
LNY N+C
Sbjct: 94 LNYNNFC 100
>sp|MATRX_IRKV|MATRIX protein|Irkut virus (IRKV)
Query: 1 KLNYRNYCI 9
K N RN+CI
Sbjct: 47 KKNMRNFCI 55
>sp|MATRX_RABVP|MATRIX protein|Rabies virus (strain Pasteur vaccins
Query: 1 KLNYRNYCI 9
K N RN+CI
Sbjct: 47 KKNRRNFCI 55
>sp|MATRX_LBV|MATRIX protein|Lagos bat virus (LBV)
Query: 1 KLNYRNYCI 9
K N RN+CI
Sbjct: 47 KENVRNFCI 55
>sp|MATRX_RABVB|MATRIX protein|Rabies virus (strain silver-haired bat-associated)
Query: 1 KLNYRNYCI 9
K N RN+C+
Sbjct: 47 KKNMRNFCV 55
>sp|PURZ_BPSHA|N6-SUCCINO-2-AMINO-2'-DEOXYADENYLATE synthase|Acinetobacter phage SH-Ab 15497
Query: 2 LNYRNYC 8
LN+ NYC
Sbjct: 323 LNFANYC 329
>sp|HEMA_RINDL|HEMAGGLUTININ glycoprotein|Rinderpest virus (strain L) (RDV)
Query: 1 KLNYRNYC 8
K+NY YC
Sbjct: 147 KINYDQYC 154
>sp|MATRX_ARAV|MATRIX protein|Aravan virus (ARAV)
Query: 1 KLNYRNYCI 9
K N RN+C+
Sbjct: 47 KKNMRNFCV 55
>sp|MATRX_RABVA|MATRIX protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 KLNYRNYCI 9
K N RN+C+
Sbjct: 47 KKNMRNFCV 55
>sp|MATRX_RABVC|MATRIX protein|Rabies virus (strain CVS-11) (RABV)
Query: 1 KLNYRNYCI 9
K N RN+C+
Sbjct: 47 KKNMRNFCV 55
>sp|MATRX_RABVR|MATRIX protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 KLNYRNYCI 9
K N RN+C+
Sbjct: 47 KKNMRNFCV 55
>sp|MATRX_WCBV|MATRIX protein|West Caucasian bat virus (WCBV)
Query: 1 KLNYRNYCI 9
K N RN+CI
Sbjct: 47 KGNTRNFCI 55
>sp|MATRX_EBLV2|MATRIX protein|European bat lyssavirus 2 (strain
Query: 3 NYRNYCI 9
N RN+C+
Sbjct: 49 NMRNFCV 55
>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)
Query: 1 KLNYRNYC 8
KL+Y YC
Sbjct: 147 KLDYDQYC 154
>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)
Query: 1 KLNYRNYC 8
KL+Y YC
Sbjct: 147 KLDYDQYC 154
>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)
Query: 1 KLNYRNYC 8
KL+Y YC
Sbjct: 147 KLDYDQYC 154
>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 KLNYRNYC 8
KL+Y YC
Sbjct: 147 KLDYDQYC 154
>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 KLNYRNYC 8
KL+Y YC
Sbjct: 147 KLDYDQYC 154
>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)
Query: 1 KLNYRNYC 8
KL+Y YC
Sbjct: 147 KLDYDQYC 154
>sp|PG136_VARV|MAJOR core protein OPG136 precursor|Variola virus
Query: 4 YRNYC 8
YRNYC
Sbjct: 604 YRNYC 608
>sp|PG136_VAR67|MAJOR core protein OPG136 precursor|Variola virus (isolate
Query: 4 YRNYC 8
YRNYC
Sbjct: 604 YRNYC 608
>sp|Y057_NPVOP|UNCHARACTERIZED 18.9 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis
Query: 4 YRNYCIK 10
Y+N+C++
Sbjct: 44 YKNFCVE 50
>sp|MATRX_MOKV|MATRIX protein|Mokola virus (MOKV)
Query: 1 KLNYRNYCI 9
K + RN+CI
Sbjct: 47 KASVRNFCI 55
>sp|S3_DPIRV|UNCHARACTERIZED protein S3|Diadromus pulchellus idnoreovirus 1 (DpIRV-1)
Query: 3 NYRNYCIK 10
N +N+C+K
Sbjct: 558 NRKNFCVK 565
>sp|RDRP_I61A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLNYRNYCIK 10
KLN R+Y I+
Sbjct: 211 KLNKRSYIIR 220
>sp|RDRP_I77AD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLNYRNYCIK 10
KLN R+Y I+
Sbjct: 211 KLNKRSYIIR 220
>sp|PG136_VACCW|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Western
Query: 4 YRNYC 8
YRNYC
Sbjct: 603 YRNYC 607
>sp|PG136_MONPV|MAJOR core protein OPG136 precursor|Monkeypox virus (MPXV)
Query: 4 YRNYC 8
YRNYC
Sbjct: 603 YRNYC 607
>sp|RDRP_I66A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLNYRNYCIK 10
KLN R+Y I+
Sbjct: 211 KLNKRSYLIR 220
>sp|PG136_VACCC|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Copenhagen)
Query: 4 YRNYC 8
YRNYC
Sbjct: 603 YRNYC 607
>sp|RDRP_I35A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 KLNYRNYCIK 10
KLN R+Y I+
Sbjct: 211 KLNKRSYLIR 220
>sp|130R_IIV6|UNCHARACTERIZED protein 130R|Invertebrate iridescent virus 6 (IIV-6)
Query: 5 RNYCIK 10
RNYC+K
Sbjct: 165 RNYCMK 170
>sp|YL581_MIMIV|UNCHARACTERIZED protein L581|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 KLNYRNYCIK 10
++NY+ +C K
Sbjct: 432 EINYKTFCTK 441
6|SequenceR|35|26|KPKRQKLNYR
>sp|POLG_LMV0|GENOME polyprotein|Lettuce mosaic virus (strain 0
Query: 1 KPKRQKLNYR 10
K +RQKL YR
Sbjct: 2025 KRQRQKLRYR 2034
>sp|POLG_LMVE|GENOME polyprotein|Lettuce mosaic virus (strain E)
Query: 1 KPKRQKLNYR 10
K +RQKL YR
Sbjct: 2025 KRQRQKLRYR 2034
>sp|TLP20_NPVOP|TELOKIN-LIKE protein 20 homolog|Orgyia pseudotsugata multicapsid polyhedrosis
Query: 2 PKRQKLNYR 10
PK+QKL+ R
Sbjct: 144 PKKQKLDER 152
>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2
Query: 1 KPKRQKLNY 9
KP RQ L Y
Sbjct: 87 KPNRQGLGY 95
>sp|POLG_RGMVD|GENOME polyprotein|Ryegrass mosaic virus (isolate Denmark/Danish)
Query: 1 KPKRQKLNYR 10
K +R+KL YR
Sbjct: 1810 KRQREKLQYR 1819
>sp|V_SV41|NON-STRUCTURAL protein V|Simian virus 41 (SV41)
Query: 1 KPKRQKLNY 9
KPKR+K+ +
Sbjct: 67 KPKRKKIQH 75
>sp|PHOSP_SV41|PHOSPHOPROTEIN virus 41 (SV41)
Query: 1 KPKRQKLNY 9
KPKR+K+ +
Sbjct: 67 KPKRKKIQH 75
7|SequenceR|40|31|CCELVKPKRQ
>sp|Y017_HVAVE|UNCHARACTERIZED protein ORF17|Heliothis virescens ascovirus 3e (HvAV-3e)
Query: 2 CELVKPKRQ 10
CE +KP R+
Sbjct: 122 CEPIKPNRK 130
8|SequenceR|45|36|ACVRHCCELV
>sp|POL_SIVVT|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate
Query: 1 ACVRHCCELV 10
A VR CC LV
Sbjct: 102 AIVRQCCHLV 111
>sp|POL_SIVVG|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate
Query: 1 ACVRHCCELV 10
A VR CC LV
Sbjct: 102 AIVRQCCHLV 111
>sp|POL_SIVV1|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate
Query: 1 ACVRHCCELV 10
A VR CC LV
Sbjct: 102 AIVRQCCHLV 111
>sp|GAG_SIVV1|GAG polyprotein|Simian immunodeficiency virus agm.vervet (isolate
Query: 1 ACVRHCCELV 10
A VR CC LV
Sbjct: 102 AIVRQCCHLV 111
>sp|GAG_SIVVG|GAG polyprotein|Simian immunodeficiency virus agm.vervet (isolate
Query: 1 ACVRHCCELV 10
A VR CC LV
Sbjct: 102 AIVRQCCHLV 111
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 ACVRHCCEL 9
A VR CC++
Sbjct: 2641 AAVRRCCQM 2649
Query: 2 CVRHCCEL 9
CV CC L
Sbjct: 3363 CVDDCCPL 3370
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 ACVRHCCEL 9
CVR CC +
Sbjct: 2709 GCVRKCCSI 2717
>sp|PG129_VARV|MAJOR core protein OPG129|Variola virus
Query: 4 RHCCELV 10
RHCC L+
Sbjct: 620 RHCCILI 626
>sp|PG129_VAR67|MAJOR core protein OPG129|Variola virus (isolate Human/India/Ind3/1967)
Query: 4 RHCCELV 10
RHCC L+
Sbjct: 620 RHCCILI 626
>sp|PG129_VACCW|MAJOR core protein OPG129|Vaccinia virus (strain Western Reserve)
Query: 4 RHCCELV 10
RHCC L+
Sbjct: 619 RHCCILI 625
>sp|PG129_VACCC|MAJOR core protein OPG129|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 RHCCELV 10
RHCC L+
Sbjct: 620 RHCCILI 626
>sp|PG129_MONPV|MAJOR core protein OPG129|Monkeypox virus (MPXV)
Query: 4 RHCCELV 10
RHCC L+
Sbjct: 620 RHCCILI 626
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 ACVRHCCEL 9
CVR CC +
Sbjct: 2679 GCVRKCCSI 2687
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 ACVRHCCEL 9
CVR CC +
Sbjct: 2659 GCVRKCCSI 2667
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 ACVRHCCEL 9
CVR CC +
Sbjct: 2709 GCVRKCCSI 2717
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 ACVRHCCEL 9
CVR CC +
Sbjct: 2679 GCVRKCCSI 2687
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 ACVRHCCEL 9
CVR CC +
Sbjct: 2659 GCVRKCCSI 2667
>sp|RPOA_PRRSB|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 2 CVRHCCE 8
CV+ CCE
Sbjct: 524 CVQGCCE 530
>sp|RPOA_PRRS1|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 2 CVRHCCE 8
CV+ CCE
Sbjct: 524 CVQGCCE 530
>sp|RPOA_PRRSV|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome
Query: 2 CVRHCCE 8
CV+ CCE
Sbjct: 524 CVQGCCE 530
>sp|CEP3_HCMVM|CYTOPLASMIC envelopment protein 3|Human cytomegalovirus (strain Merlin)
Query: 2 CVRHCCEL 9
C R CCE
Sbjct: 6 CKRICCEF 13
>sp|CEP3_HCMVA|CYTOPLASMIC envelopment protein 3|Human cytomegalovirus (strain AD169)
Query: 2 CVRHCCEL 9
C R CCE
Sbjct: 6 CKRICCEF 13
>sp|VE1_CRPVK|REPLICATION protein E1|Cottontail rabbit papillomavirus (strain Kansas)
Query: 3 VRHCCELV 10
VR CC +V
Sbjct: 356 VRDCCNMV 363
>sp|RDRP_CMVMB|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain MB-8)
Query: 4 RHCCELV 10
RH CEL+
Sbjct: 750 RHQCELI 756
>sp|DPOL_OSHVF|DNA polymerase|Ostreid herpesvirus 1 (isolate France)
Query: 3 VRHCCE 8
VRH CE
Sbjct: 965 VRHACE 970
>sp|POLG_PSBMV|GENOME polyprotein|Pea seed-borne mosaic virus (strain
Query: 3 VRHCCE 8
V HCC+
Sbjct: 48 VNHCCD 53
>sp|MVP_PSBMV|P3N-PIPO polyprotein|Pea seed-borne mosaic virus (strain
Query: 3 VRHCCE 8
V HCC+
Sbjct: 48 VNHCCD 53
>sp|R1A_IBVBC|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain
Query: 5 HCCELV 10
HCCE V
Sbjct: 363 HCCERV 368
>sp|R1A_IBVB|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain
Query: 5 HCCELV 10
HCCE V
Sbjct: 363 HCCERV 368
>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 5 HCCELV 10
HCCE V
Sbjct: 363 HCCERV 368
>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 5 HCCELV 10
HCCE V
Sbjct: 363 HCCERV 368
>sp|R1A_IBVM|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain
Query: 5 HCCELV 10
HCCE V
Sbjct: 363 HCCERV 368
>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 5 HCCELV 10
HCCE V
Sbjct: 363 HCCERV 368
>sp|NCAP_BDVV|NUCLEOPROTEIN disease virus (strain V)
Query: 5 HCCELV 10
HCC L+
Sbjct: 139 HCCSLL 144
>sp|NCAP_BDV1|NUCLEOPROTEIN disease virus 1 (BoDV-1)
Query: 5 HCCELV 10
HCC L+
Sbjct: 139 HCCSLL 144
>sp|GAG_CAEVC|GAG polyprotein|Caprine arthritis encephalitis virus (strain
Query: 2 CVRHCCEL 9
C++H C++
Sbjct: 18 CIKHACKI 25
>sp|1101B_ASFP4|PROTEIN MGF 360-1L|African swine fever virus (isolate
Query: 3 VRHCC 7
+RHCC
Sbjct: 76 IRHCC 80
9|SequenceR|50|41|KYLCKACVRH
>sp|L_TUPVT|RNA-DIRECTED RNA polymerase L|Tupaia virus (isolate Tupaia/Thailand/-/1986) (TUPV)
Query: 2 YLCKACVRH 10
YLCK+ VRH
Sbjct: 1567 YLCKSEVRH 1575
>sp|POLN_TYMVC|NON-STRUCTURAL replication polyprotein|Turnip yellow mosaic virus (isolate
Query: 2 YLCKACVRH 10
+ C+ C RH
Sbjct: 1768 FFCRRCPRH 1776
>sp|POLN_TYMV|NON-STRUCTURAL replication polyprotein|Turnip yellow mosaic virus
Query: 2 YLCKACVRH 10
+ C+ C RH
Sbjct: 1768 FFCRRCPRH 1776
>sp|POL2_SDVS5|RNA2 polyprotein|Satsuma dwarf virus (isolate Satsuma
Query: 1 KYLCKACVR 9
KY+ + CVR
Sbjct: 296 KYIARKCVR 304
>sp|ICP27_HHV2H|MRNA export factor|Human herpesvirus 2 (strain HG52)
Query: 4 CKACVRH 10
CK C+ H
Sbjct: 363 CKMCIHH 369
>sp|ICP27_HHV1E|MRNA export factor|Human herpesvirus 1 (strain HFEM)
Query: 4 CKACVRH 10
CK C+ H
Sbjct: 362 CKMCIHH 368
>sp|ICP27_HHV11|MRNA export factor|Human herpesvirus 1 (strain 17)
Query: 4 CKACVRH 10
CK C+ H
Sbjct: 363 CKMCIHH 369
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 4 CKACVR 9
CK C+R
Sbjct: 1299 CKGCIR 1304
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 4 CKACVR 9
CK C+R
Sbjct: 1299 CKGCIR 1304
>sp|R1A_CVPPU|REPLICASE polyprotein 1a|Porcine transmissible gastroenteritis coronavirus
Query: 3 LCKACV 8
LCKAC+
Sbjct: 1944 LCKACL 1949
>sp|M1249_ASFWA|MINOR capsid protein M1249L|African swine fever virus (isolate
Query: 3 LCKAC 7
LCKAC
Sbjct: 441 LCKAC 445
>sp|M1249_ASFP4|MINOR capsid protein M1249L|African swine fever virus (isolate
Query: 3 LCKAC 7
LCKAC
Sbjct: 441 LCKAC 445
>sp|M1249_ASFM2|MINOR capsid protein M1249L|African swine fever virus (isolate
Query: 3 LCKAC 7
LCKAC
Sbjct: 441 LCKAC 445
>sp|M1249_ASFK5|MINOR capsid protein M1249L|African swine fever virus (isolate
Query: 3 LCKAC 7
LCKAC
Sbjct: 442 LCKAC 446
>sp|M1249_ASFB7|MINOR capsid protein M1249L|African swine fever virus (strain
Query: 3 LCKAC 7
LCKAC
Sbjct: 441 LCKAC 445
>sp|THYX_PBCV1|PROBABLE flavin-dependent thymidylate synthase|Paramecium bursaria
Query: 3 LCKACVRH 10
L K C+RH
Sbjct: 44 LLKYCIRH 51
>sp|YL208_MIMIV|UNCHARACTERIZED protein L208|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 YLCKACVRH 10
Y+C AC H
Sbjct: 179 YVCTACTTH 187
>sp|RDRP_ACLSA|RNA-DIRECTED RNA polymerase|Apple chlorotic leaf spot virus
Query: 1 KYLCKACVRH 10
KYL K +RH
Sbjct: 1501 KYLAKVFLRH 1510
>sp|VIF_OMVVS|VIRION infectivity factor|Ovine maedi visna related virus
Query: 3 LCKACVR 9
LCK+C++
Sbjct: 156 LCKSCIQ 162
>sp|Y121_OSHVF|PUTATIVE zinc finger protein ORF121|Ostreid herpesvirus 1 (isolate France)
Query: 2 YLCKACVRH 10
Y+C C+R
Sbjct: 87 YICDNCIRQ 95
>sp|PG072_VACCW|PROBABLE FAD-linked sulfhydryl oxidase OPG072|Vaccinia virus (strain
Query: 4 CKACVRH 10
C AC RH
Sbjct: 43 CPACRRH 49
>sp|YR472_MIMIV|UNCHARACTERIZED protein R472|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 YLCKAC 7
Y+CK C
Sbjct: 774 YVCKVC 779
>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)
Query: 3 LCKACV 8
LCKAC+
Sbjct: 1969 LCKACL 1974
>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus
Query: 3 LCKACV 8
LCKAC+
Sbjct: 1944 LCKACL 1949
>sp|PG072_VACCC|PROBABLE FAD-linked sulfhydryl oxidase OPG072|Vaccinia virus (strain
Query: 4 CKACVRH 10
C AC RH
Sbjct: 43 CPACRRH 49
>sp|PG072_MONPV|PROBABLE FAD-linked sulfhydryl oxidase OPG072|Monkeypox virus (MPXV)
Query: 4 CKACVRH 10
C AC RH
Sbjct: 43 CPACRRH 49
>sp|PG072_VARV|PROBABLE FAD-linked sulfhydryl oxidase OPG072|Variola virus
Query: 4 CKACVRH 10
C AC RH
Sbjct: 43 CPACRRH 49
>sp|PG072_VAR67|PROBABLE FAD-linked sulfhydryl oxidase OPG072|Variola virus (isolate
Query: 4 CKACVRH 10
C AC RH
Sbjct: 43 CPACRRH 49
>sp|YR260_MIMIV|DNAJ-LIKE protein R260|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 KYLCKAC 7
K++CK C
Sbjct: 144 KHVCKVC 150
>sp|VIF_VILV1|VIRION infectivity factor|Maedi visna virus (strain 1514
Query: 3 LCKACVR 9
LCK+C++
Sbjct: 156 LCKSCIQ 162
>sp|VIF_VILVK|VIRION infectivity factor|Maedi visna virus (strain KV1772)
Query: 3 LCKACVR 9
LCK+C++
Sbjct: 156 LCKSCIQ 162
>sp|VIF_VILV2|VIRION infectivity factor|Maedi visna virus (strain 1514
Query: 3 LCKACVR 9
LCK+C++
Sbjct: 156 LCKSCIQ 162
>sp|VIF_VILV|VIRION infectivity factor|Maedi visna virus (strain 1514)
Query: 3 LCKACVR 9
LCK+C++
Sbjct: 156 LCKSCIQ 162
>sp|Y012_OSHVF|UNCHARACTERIZED protein ORF12|Ostreid herpesvirus 1 (isolate France)
Query: 1 KYLCKACVRH 10
+Y+ K C+R+
Sbjct: 119 RYIRKTCIRY 128
10|SequenceR|55|46|GFDIIKYLCK
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 GFDIIKYLCK 10
G D ++YLCK
Sbjct: 680 GVDPVEYLCK 689
>sp|RDRP_YOMV|REPLICASE large subunit|Youcai mosaic virus (YoMV)
Query: 3 DIIKYLCK 10
+IIKY+CK
Sbjct: 275 NIIKYVCK 282
>sp|VF306_IIV3|PUTATIVE SWIB domain-containing protein 070L|Invertebrate iridescent virus 3
Query: 2 FDIIKYLC 9
+D+ KYLC
Sbjct: 124 YDVTKYLC 131
>sp|RDRP_TVCV|REPLICASE large subunit|Turnip vein-clearing virus (TVCV)
Query: 3 DIIKYLCK 10
+IIKY+CK
Sbjct: 275 NIIKYVCK 282
>sp|YR911_MIMIV|PUTATIVE ankyrin repeat protein R911|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 FDIIKYL 8
FD+IKYL
Sbjct: 393 FDVIKYL 399
>sp|YR784_MIMIV|PUTATIVE ankyrin repeat protein R784|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 GFDIIKYLCK 10
FD++K LCK
Sbjct: 219 NFDLVKLLCK 228
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GFDIIKYL 8
G+DI+KYL
Sbjct: 786 GWDILKYL 793
>sp|RDRP_ORSVS|REPLICASE large subunit|Odontoglossum ringspot virus (isolate Singapore
Query: 3 DIIKYLCK 10
++IKY+CK
Sbjct: 275 NVIKYVCK 282
>sp|YR787_MIMIV|PUTATIVE ankyrin repeat protein R787|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 FDIIKYLCK 10
F+++KYLC+
Sbjct: 169 FEMVKYLCE 177
>sp|RDRP_ORSVC|REPLICASE large subunit|Odontoglossum ringspot virus (isolate Korean
Query: 3 DIIKYLCK 10
++IKY+CK
Sbjct: 275 NVIKYVCK 282
>sp|YL022_MIMIV|PUTATIVE ankyrin repeat protein L22|Acanthamoeba polyphaga mimivirus
Query: 2 FDIIKYL 8
FD++KYL
Sbjct: 77 FDVVKYL 83
>sp|RDRP_TOMS1|REPLICASE large subunit|Tomato mosaic virus (strain S-1)
Query: 3 DIIKYLCK 10
+I+KY+CK
Sbjct: 276 NILKYVCK 283
>sp|RDRP_TOML|REPLICASE large subunit|Tomato mosaic virus (strain L)
Query: 3 DIIKYLCK 10
+I+KY+CK
Sbjct: 276 NILKYVCK 283
>sp|RDRP_TOMK2|REPLICASE large subunit|Tomato mosaic virus (strain Kazakh
Query: 3 DIIKYLCK 10
+I+KY+CK
Sbjct: 276 NILKYVCK 283
>sp|RDRP_TOMK1|REPLICASE large subunit|Tomato mosaic virus (strain Kazakh
Query: 3 DIIKYLCK 10
+I+KY+CK
Sbjct: 276 NILKYVCK 283
>sp|RDRP_TMVRA|REPLICASE large subunit|Tobacco mosaic virus (strain Rakkyo)
Query: 3 DIIKYLCK 10
+I+KY+CK
Sbjct: 276 NILKYVCK 283
>sp|RDRP_TMVOM|REPLICASE large subunit|Tobacco mosaic virus (strain OM)
Query: 3 DIIKYLCK 10
+I+KY+CK
Sbjct: 276 NILKYVCK 283
>sp|RDRP_TMVKR|REPLICASE large subunit|Tobacco mosaic virus (strain Korean
Query: 3 DIIKYLCK 10
+I+KY+CK
Sbjct: 276 NILKYVCK 283
>sp|RDRP_TMVB|REPLICASE large subunit|Tobacco mosaic virus (strain B935A)
Query: 3 DIIKYLCK 10
+I+KY+CK
Sbjct: 276 NILKYVCK 283
>sp|RDRP_TMV|REPLICASE large subunit|Tobacco mosaic virus (strain vulgare)
Query: 3 DIIKYLCK 10
+I+KY+CK
Sbjct: 276 NILKYVCK 283
>sp|RDRP_TBRFV|REPLICASE large subunit|Tomato brown rugose fruit virus
Query: 3 DIIKYLCK 10
+I+KY+CK
Sbjct: 276 NILKYVCK 283
>sp|Y057_HVAVE|UNCHARACTERIZED protein ORF57|Heliothis virescens ascovirus 3e (HvAV-3e)
Query: 2 FDIIKYLC 9
F +IKYLC
Sbjct: 185 FRLIKYLC 192
>sp|YL177_MIMIV|UNCHARACTERIZED protein L177|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 FDIIKYLCK 10
+DIIK+ CK
Sbjct: 98 YDIIKFFCK 106
>sp|PG025_VACCC|ANKYRIN repeat protein OPG025|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 FDIIKYLC 9
FDI +YLC
Sbjct: 72 FDIFEYLC 79
>sp|PG025_VACCW|ANKYRIN repeat protein OPG025|Vaccinia virus (strain Western Reserve)
Query: 2 FDIIKYLC 9
FDI +YLC
Sbjct: 72 FDIFEYLC 79
>sp|PG025_MONPV|ANKYRIN repeat protein OPG025|Monkeypox virus (MPXV)
Query: 1 GFDIIKYLC 9
FDI +YLC
Sbjct: 71 DFDIFEYLC 79
>sp|VP03_SHV21|PROBABLE membrane antigen 3|Saimiriine herpesvirus 2 (strain 11)
Query: 1 GFDIIKYLC 9
G D IK+LC
Sbjct: 856 GEDAIKFLC 864
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 FDIIKYLCK 10
F +IK++C+
Sbjct: 660 FSMIKFICR 668
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 FDIIKYLCK 10
F +IK++C+
Sbjct: 660 FSMIKFICR 668
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 FDIIKYLCK 10
F +IK++C+
Sbjct: 660 FSMIKFICR 668
>sp|YONO_BPSPB|DNA-DIRECTED RNA polymerase YonO|Bacillus phage SPbeta (Bacillus phage
Query: 1 GFDIIKYLC 9
D+IK+LC
Sbjct: 609 NLDVIKWLC 617
>sp|RDRP_PMMVS|REPLICASE large subunit|Pepper mild mottle virus (strain
Query: 3 DIIKYLCK 10
+++KY+CK
Sbjct: 275 NVLKYVCK 282
>sp|RDRP_PMMVJ|REPLICASE large subunit|Pepper mild mottle virus (strain
Query: 3 DIIKYLCK 10
+++KY+CK
Sbjct: 275 NVLKYVCK 282
>sp|RPB2_IIV6|PROBABLE DNA-directed RNA polymerase II|Invertebrate iridescent virus 6
Query: 1 GFDIIKYLC 9
G DI+K+ C
Sbjct: 1160 GIDIVKFNC 1168
>sp|YL091_MIMIV|PUTATIVE ankyrin repeat protein L91|Acanthamoeba polyphaga mimivirus (APMV)
Query: 3 DIIKYLCK 10
DI+KYL K
Sbjct: 274 DIVKYLLK 281
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 FDIIKYL 8
FDI KYL
Sbjct: 886 FDITKYL 892
>sp|YL179_MIMIV|UNCHARACTERIZED protein L179|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 FDIIKYLCK 10
+DIIK+ CK
Sbjct: 86 YDIIKFYCK 94
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 3 DIIKYLC 9
D +KYLC
Sbjct: 166 DTMKYLC 172
>sp|VP12_CTFVL|UNCHARACTERIZED protein VP12|Colorado tick fever virus (strain
Query: 2 FDIIKYLC 9
FDI+ +LC
Sbjct: 60 FDILFFLC 67
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 5 IKYLCK 10
I+YLCK
Sbjct: 1149 IRYLCK 1154
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 IKYLCK 10
I+YLCK
Sbjct: 1058 IRYLCK 1063
>sp|REP_BPIKE|REPLICATION-ASSOCIATED protein G2P|Salmonella phage IKe (Bacteriophage IKe)
Query: 2 FDIIKY 7
FDI+KY
Sbjct: 264 FDIVKY 269
>sp|YR789_MIMIV|PUTATIVE ankyrin repeat protein R789|Acanthamoeba polyphaga mimivirus
Query: 2 FDIIKYLCK 10
FDI+K+L K
Sbjct: 82 FDIVKHLIK 90
Query: 3 DIIKYLCK 10
D +KYLC
Sbjct: 282 DTVKYLCN 289
>sp|RDRP_TMOB|REPLICASE large subunit|Tobamovirus Ob
Query: 3 DIIKYLCK 10
+++KY+CK
Sbjct: 276 NLLKYVCK 283
>sp|PG153_VAR67|ENVELOP protein OPG153|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 DIIKYLCK 10
D IKY CK
Sbjct: 156 DRIKYACK 163
>sp|PG153_MONPV|ENVELOP protein OPG153|Monkeypox virus (MPXV)
Query: 3 DIIKYLCK 10
D IKY CK
Sbjct: 156 DRIKYACK 163
>sp|YL099_MIMIV|PUTATIVE ankyrin repeat protein L99|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 FDIIKYLCK 10
F+++KYL K
Sbjct: 95 FEVVKYLIK 103
>sp|YL178_MIMIV|UNCHARACTERIZED protein L178|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 FDIIKYLCK 10
+DI+K+ CK
Sbjct: 97 YDIVKFYCK 105
>sp|YR886_MIMIV|PUTATIVE ankyrin repeat protein R886|Acanthamoeba polyphaga mimivirus
Query: 2 FDIIKYL 8
F+I+KYL
Sbjct: 35 FEIVKYL 41
>sp|YR840_MIMIV|PUTATIVE ankyrin repeat protein R840|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 FDIIKYL 8
F+I+KYL
Sbjct: 452 FEIVKYL 458
>sp|YR578_MIMIV|PUTATIVE ankyrin repeat protein R578|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 GFDIIKYL 8
FDI KYL
Sbjct: 370 NFDITKYL 377
>sp|ARBH_MHV68|APOPTOSIS regulator Bcl-2 homolog|Murid herpesvirus 4 (MuHV-4) (Murine
Query: 2 FDIIKYLCK 10
FD+ +Y+C+
Sbjct: 92 FDVGRYVCE 100
11|SequenceR|60|51|GQPSDGFDII
>sp|CAPSH_ADE08|HEXON protein|Human adenovirus D serotype 8
Query: 1 GQPSDGFDI 9
GQP++ FDI
Sbjct: 173 GQPTENFDI 181
>sp|YL786_MIMIV|PUTATIVE BTB/POZ domain and WD-repeat|Acanthamoeba polyphaga mimivirus
Query: 3 PSDGFDII 10
PS+GFD++
Sbjct: 118 PSEGFDLL 125
>sp|HEMA_ISAV8|HEMAGGLUTININ-ESTERASE salmon anemia virus (isolate
Query: 3 PSDGFD 8
PSDGFD
Sbjct: 256 PSDGFD 261
>sp|VP4_ROTGA|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 2 QPSDGFDI 9
QP DGF +
Sbjct: 308 QPGDGFSV 315
>sp|Y042_SFAVA|UNCHARACTERIZED protein ORF42|Spodoptera frugiperda ascovirus 1a (SfAV-1a)
Query: 2 QPSDGFDI 9
+PSD FD+
Sbjct: 73 RPSDRFDV 80
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 3 PSDGFDI 9
P DGF+I
Sbjct: 655 PDDGFEI 661
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 3 PSDGFDI 9
P DGF+I
Sbjct: 655 PDDGFEI 661
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 3 PSDGFDI 9
P DGF+I
Sbjct: 655 PDDGFEI 661
>sp|YR154_MIMIV|PUTATIVE BTB/POZ domain and WD-repeat|Acanthamoeba polyphaga mimivirus
Query: 3 PSDGFDII 10
PS+GF+++
Sbjct: 117 PSEGFELL 124
>sp|YR691_MIMIV|UNCHARACTERIZED protein R691|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 QPSDGFDII 10
PSD +DI+
Sbjct: 138 HPSDWYDIV 146
12|SequenceR|65|56|PCVIVGQPSD
>sp|D3_CNPV|27 kDa core protein|Canarypox virus (CNPV)
Query: 3 VIVGQPSD 10
VI+G+PSD
Sbjct: 183 VILGKPSD 190
>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)
Query: 1 PCVIVGQPSD 10
P V+V QPS+
Sbjct: 2066 PQVVVSQPSE 2075
>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)
Query: 1 PCVIVGQPSD 10
P V+V QPS+
Sbjct: 2066 PQVVVSQPSE 2075
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 1 PCVIVGQPSD 10
PC G+P+D
Sbjct: 598 PCKTDGRPTD 607
>sp|LTP_EHV1B|LARGE tegument protein deneddylase|Equine herpesvirus 1 (strain Ab4p)
Query: 1 PCVIVGQPS 9
PC+IV PS
Sbjct: 2319 PCLIVLDPS 2327
>sp|YR346_MIMIV|UNCHARACTERIZED protein R346|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 PCVIVGQPS 9
PCV G PS
Sbjct: 152 PCVTYGTPS 160
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 VIVGQPSD 10
++VGQP++
Sbjct: 1116 IVVGQPTE 1123
13|SequenceR|70|61|EFRCFPCVIV
>sp|YL268_MIMIV|PUTATIVE serine/threonine-protein kinase L268|Acanthamoeba polyphaga
Query: 1 EFRCFPC 7
+++CFPC
Sbjct: 147 KYKCFPC 153
>sp|YR190_MIMIV|PUTATIVE ankyrin repeat protein R190|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 EFRCFPCVIV 10
+FRC CVI+
Sbjct: 100 DFRCDDCVIL 109
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 2 FRCFPCVI 9
FRCF C +
Sbjct: 775 FRCFSCCM 782
>sp|YL884_MIMIV|PUTATIVE CDC123-like protein L884|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 EFRCF 5
EFRCF
Sbjct: 207 EFRCF 211
>sp|PRIM_ASFM2|PUTATIVE helicase/primase complex protein|African swine fever virus (isolate
Query: 1 EFRCFPCVI 9
E C PC++
Sbjct: 237 ETTCLPCIL 245
>sp|PRIM_ASFK5|PUTATIVE helicase/primase complex protein|African swine fever virus (isolate
Query: 1 EFRCFPCVI 9
E C PC++
Sbjct: 233 ETTCLPCIL 241
>sp|KBTB2_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 4 CFPCVIV 10
C PC++V
Sbjct: 260 CNPCIVV 266
>sp|IL18B_VACCW|INTERLEUKIN-18-BINDING protein|Vaccinia virus (strain Western Reserve)
Query: 1 EFRCFPCV 8
EFRC CV
Sbjct: 36 EFRCTGCV 43
>sp|VP5_RRSVT|PUTATIVE minor structural protein VP5|Rice ragged stunt virus (isolate
Query: 1 EFRCFPC 7
E +C PC
Sbjct: 254 EIKCLPC 260
>sp|KBTB2_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 4 CFPCVIV 10
C PC++V
Sbjct: 270 CNPCILV 276
>sp|KBTB2_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 4 CFPCVIV 10
C PC++V
Sbjct: 270 CNPCILV 276
>sp|PE38_NPVAC|MAJOR immediate early protein|Autographa californica nuclear polyhedrosis
Query: 4 CFPCVI 9
CF CVI
Sbjct: 114 CFKCVI 119
>sp|YR047_MIMIV|UNCHARACTERIZED protein R47|Acanthamoeba polyphaga mimivirus (APMV)
Query: 3 RCFPC 7
+CFPC
Sbjct: 63 KCFPC 67
14|SequenceR|75|66|DPLCTEFRCF
>sp|POL_SIVG1|GAG-POL polyprotein|Simian immunodeficiency virus agm.grivet (isolate
Query: 2 PLCTEFR 8
PLC EFR
Sbjct: 728 PLCKEFR 734
>sp|GT300_AFV1Y|PUTATIVE glycosyltransferase ORF300|Acidianus filamentous virus 1 (isolate
Query: 2 PLCTEFR 8
P CTEFR
Sbjct: 115 PRCTEFR 121
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 2 PLCTEF 7
P+CTEF
Sbjct: 315 PMCTEF 320
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 2 PLCTEF 7
P+CTEF
Sbjct: 315 PMCTEF 320
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 2 PLCTEF 7
P+CTEF
Sbjct: 324 PMCTEF 329
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 PLCTEFRC 9
PLC RC
Sbjct: 108 PLCVAMRC 115
>sp|ENV_SIVS4|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate
Query: 2 PLCTEFRC 9
PLC RC
Sbjct: 106 PLCIAMRC 113
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 PLCTEFRC 9
PLC RC
Sbjct: 105 PLCVAMRC 112
>sp|ENV_SIVML|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate K78)
Query: 2 PLCTEFRC 9
PLC RC
Sbjct: 106 PLCITMRC 113
>sp|RIR2_SWPVK|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Swinepox virus (strain Kasza) (SWPV)
Query: 1 DPLCTEFRCF 10
D C+E RCF
Sbjct: 84 DVQCSEARCF 93
>sp|ENV_SIVSP|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate
Query: 2 PLCTEFRC 9
PLC RC
Sbjct: 106 PLCITMRC 113
>sp|ENV_SIVMK|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate K6W)
Query: 2 PLCTEFRC 9
PLC RC
Sbjct: 106 PLCITMRC 113
>sp|ENV_SIVM2|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate Mm251)
Query: 2 PLCTEFRC 9
PLC RC
Sbjct: 106 PLCITMRC 113
>sp|POLG_PEMVC|GENOME polyprotein|Pepper mottle virus (isolate California)
Query: 2 PLCTEFRC 9
PLCT C
Sbjct: 20 PLCTTVHC 27
>sp|ENV_SIVM1|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate Mm142-83)
Query: 2 PLCTEFRC 9
PLC RC
Sbjct: 106 PLCITMRC 113
>sp|MVP_PEMVC|P3N-PIPO polyprotein|Pepper mottle virus (isolate California)
Query: 2 PLCTEFRC 9
PLCT C
Sbjct: 20 PLCTTVHC 27
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PLCTEFRC 9
PLC +C
Sbjct: 124 PLCVSLKC 131
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PLCTEFRC 9
PLC +C
Sbjct: 124 PLCVSLKC 131
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PLCTEFRC 9
PLC +C
Sbjct: 124 PLCVSLKC 131
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PLCTEFRC 9
PLC +C
Sbjct: 124 PLCVSLKC 131
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PLCTEFRC 9
PLC +C
Sbjct: 124 PLCVSLKC 131
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PLCTEFRC 9
PLC +C
Sbjct: 124 PLCVSLKC 131
>sp|CFLA_EHV2|VIRAL CASP8 and FADD-like apoptosis|Equine herpesvirus 2 (strain 86/87)
Query: 2 PLCTEFRCF 10
P+C+ FRC
Sbjct: 88 PICSPFRCL 96
>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 PLCTEFRC 9
PLC RC
Sbjct: 105 PLCVAMRC 112
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PLCTEFRC 9
PLC +C
Sbjct: 124 PLCVNLKC 131
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 DPLCTE 6
DPLC E
Sbjct: 560 DPLCVE 565
>sp|ENV_MPMV|ENVELOPE glycoprotein|Mason-Pfizer monkey virus (MPMV) (Simian
Query: 1 DPLCTEFRCF 10
D LC+ F C
Sbjct: 265 DTLCSNFACL 274
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 3 LCTEFRCF 10
LC F+CF
Sbjct: 675 LCKGFQCF 682
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 3 LCTEFRCF 10
LC F+CF
Sbjct: 679 LCKGFQCF 686
>sp|SEMA_ALHV1|SEMAPHORIN-LIKE protein A3|Alcelaphine herpesvirus 1 (strain C500)
Query: 1 DPLCTEF 7
DPLCT +
Sbjct: 530 DPLCTWY 536
>sp|VG36_ALHV1|PUTATIVE tyrosine kinase 36|Alcelaphine herpesvirus 1 (strain C500)
Query: 2 PLCTEFRCF 10
PLC RC+
Sbjct: 262 PLCVLRRCY 270
15|SequenceR|80|71|SSVEDDPLCT
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 SSVEDDPLCT 10
S +EDD LCT
Sbjct: 1723 SCIEDDSLCT 1732
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 SSVEDDPLCT 10
S +EDD LCT
Sbjct: 1723 SCIEDDSLCT 1732
>sp|SEMA_ALHV1|SEMAPHORIN-LIKE protein A3|Alcelaphine herpesvirus 1 (strain C500)
Query: 6 DPLCT 10
DPLCT
Sbjct: 530 DPLCT 534
>sp|CAPSD_AQRVA|INNER capsid protein VP3|Aquareovirus A (isolate Chum
Query: 3 VEDDPLCT 10
VED+ LCT
Sbjct: 191 VEDEGLCT 198
16|SequenceR|85|76|NDDPLSSVED
>sp|NCAP_INCJH|NUCLEOPROTEIN C virus (strain C/Johannesburg/1/1966)
Query: 1 NDDPLSSVED 10
NDD + S+ED
Sbjct: 330 NDDEIESIED 339
>sp|NCAP_INCAA|NUCLEOPROTEIN C virus (strain C/Ann
Query: 1 NDDPLSSVED 10
NDD + S+ED
Sbjct: 330 NDDEIESIED 339
>sp|NCAP_INCCA|NUCLEOPROTEIN C virus (strain C/California/1978)
Query: 1 NDDPLSSVED 10
NDD + S+ED
Sbjct: 330 NDDEIESIED 339
>sp|POL_JSRV|GAG-PRO-POL polyprotein|Sheep pulmonary adenomatosis virus (Jaagsiekte
Query: 1 NDDPLSSVED 10
NDD LSS ++
Sbjct: 136 NDDSLSSTDE 145
>sp|US02_HHV2H|PROTEIN US2|Human herpesvirus 2 (strain HG52)
Query: 2 DDPLSSVE 9
DDPL S+E
Sbjct: 93 DDPLESIE 100
>sp|VP5_APRVF|OUTER capsid protein VP5|Aedes pseudoscutellaris reovirus (isolate
Query: 1 NDDPLSSV 8
ND+PL+S+
Sbjct: 128 NDNPLASI 135
>sp|PRO_JSRV|GAG-PRO polyprotein|Sheep pulmonary adenomatosis virus (Jaagsiekte
Query: 1 NDDPLSSVED 10
NDD LSS ++
Sbjct: 136 NDDSLSSTDE 145
>sp|GAG_JSRV|GAG polyprotein|Sheep pulmonary adenomatosis virus (Jaagsiekte
Query: 1 NDDPLSSVED 10
NDD LSS ++
Sbjct: 136 NDDSLSSTDE 145
17|SequenceR|90|81|NVLINNDDPL
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 NVLINNDDPL 10
N L NNDDP+
Sbjct: 564 NELQNNDDPV 573
>sp|YL112_MIMIV|PUTATIVE ankyrin repeat protein L112|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 NVLINNDDPL 10
N+++NN++P+
Sbjct: 396 NIIVNNNEPI 405
>sp|UB222_WSSVS|RING finger containing E3 ubiquitin-protein|White spot syndrome virus
Query: 3 LINNDDP 9
+INND+P
Sbjct: 512 IINNDNP 518
>sp|VIE2_NPVBM|E3 ubiquitin-protein ligase IE2|Bombyx mori nuclear polyhedrosis virus
Query: 2 VLINNDDPL 10
V I+NDDPL
Sbjct: 110 VNISNDDPL 118
>sp|UL97_ELHVK|PHOSPHOTRANSFERASE UL97 homolog|Elephantid herpesvirus 1 (isolate Asian
Query: 1 NVLINNDD 8
N+LIN D+
Sbjct: 279 NILINTDE 286
>sp|IE2_NPVAC|E3 ubiquitin-protein ligase IE2|Autographa californica nuclear
Query: 2 VLINNDDPL 10
V I+NDDPL
Sbjct: 93 VNISNDDPL 101
>sp|PCNA_MIMIV|PROBABLE DNA polymerase sliding clamp|Acanthamoeba polyphaga mimivirus
Query: 3 LINNDDPL 10
+IN+DDP+
Sbjct: 290 MINDDDPI 297
>sp|VL1_OVPVD|MAJOR capsid protein L1|Odocoileus virginianus papillomavirus 1 (DPV)
Query: 5 NNDDPL 10
NND+PL
Sbjct: 345 NNDEPL 350
18|SequenceR|95|86|GGCTLNVLIN
>sp|VHR2_SHEVK|PROBABLE host range protein 2|Sheeppox virus (strain KS-1) (SPPV)
Query: 2 GCTLNVLIN 10
GCT+N+ +N
Sbjct: 30 GCTINIKVN 38
>sp|VHR2_LSDV|PROBABLE host range protein 2|Lumpy skin disease virus (LSDV)
Query: 2 GCTLNVLIN 10
GCT+N+ +N
Sbjct: 30 GCTINIKVN 38
>sp|POL1_TORVR|RNA1 polyprotein|Tomato ringspot virus (isolate raspberry)
Query: 2 GCTLNVLIN 10
GC L V+IN
Sbjct: 1831 GCALTVIIN 1839
>sp|POL1_BRAV|RNA1 polyprotein|Blackcurrant reversion association virus (BRAV)
Query: 2 GCTLNVLIN 10
GC L VL+N
Sbjct: 1723 GCALTVLLN 1731
>sp|POL1_ARMVN|RNA1 polyprotein|Arabis mosaic virus (isolate NW)
Query: 2 GCTLNVLIN 10
GC L V+IN
Sbjct: 1794 GCALTVVIN 1802
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GCTLNVLIN 10
GCTLN+ I+
Sbjct: 583 GCTLNLPIS 591
>sp|U20_HHV6U|GLYCOPROTEIN U20|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 GGCTLN 6
GGC+LN
Sbjct: 351 GGCSLN 356
>sp|PG143_VACCW|VIRION membrane protein OPG143|Vaccinia virus (strain Western Reserve)
Query: 2 GCTLNV 7
GCT+NV
Sbjct: 295 GCTINV 300
>sp|PG143_VACCC|VIRION membrane protein OPG143|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 GCTLNV 7
GCT+NV
Sbjct: 295 GCTINV 300
>sp|A16_VACCT|VIRION membrane protein A16|Vaccinia virus (strain Tian Tan)
Query: 2 GCTLNV 7
GCT+NV
Sbjct: 295 GCTINV 300
>sp|A16_RABPU|VIRION membrane protein A16|Rabbitpox virus (strain Utrecht) (RPV)
Query: 2 GCTLNV 7
GCT+NV
Sbjct: 295 GCTINV 300
>sp|A16_VACCA|VIRION membrane protein A16|Vaccinia virus (strain Ankara) (VACV)
Query: 2 GCTLNV 7
GCT+NV
Sbjct: 295 GCTINV 300
>sp|PG143_MONPV|VIRION membrane protein OPG143|Monkeypox virus (MPXV)
Query: 2 GCTLNV 7
GCT+NV
Sbjct: 295 GCTINV 300
>sp|PG143_VAR67|VIRION membrane protein OPG143|Variola virus (isolate
Query: 2 GCTLNV 7
GCT+NV
Sbjct: 295 GCTINV 300
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 GGCTLNVL 8
G CT N+L
Sbjct: 149 GNCTTNIL 156
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 GGCTLNVL 8
G CT N+L
Sbjct: 149 GNCTTNIL 156
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 GGCTLNVL 8
G CT N+L
Sbjct: 149 GNCTTNIL 156
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 GGCTLNVL 8
G CT N+L
Sbjct: 149 GNCTTNIL 156
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 GGCTLNVL 8
G CT N+L
Sbjct: 149 GNCTTNIL 156
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 GGCTLNVL 8
G CT N+L
Sbjct: 149 GNCTTNIL 156
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 GGCTLNVL 8
G CT N+L
Sbjct: 149 GNCTTNIL 156
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 GGCTLNVL 8
G CT N+L
Sbjct: 149 GNCTTNIL 156
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 GGCTLNVL 8
G CT N+L
Sbjct: 149 GNCTTNIL 156
>sp|POL_SIVTN|GAG-POL polyprotein|Simian immunodeficiency virus (isolate TAN1)
Query: 2 GCTLNVLIN 10
GCTLN I+
Sbjct: 609 GCTLNFPIS 617
>sp|POL_SIVMB|GAG-POL polyprotein|Simian immunodeficiency virus (isolate MB66)
Query: 2 GCTLNVLIN 10
GCTLN I+
Sbjct: 581 GCTLNFPIS 589
>sp|POL_SIVEK|GAG-POL polyprotein|Simian immunodeficiency virus (isolate EK505)
Query: 2 GCTLNVLIN 10
GCTLN I+
Sbjct: 591 GCTLNFPIS 599
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GCTLNVLIN 10
GCTLN I+
Sbjct: 583 GCTLNFPIS 591
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GCTLNVLIN 10
GCTLN I+
Sbjct: 592 GCTLNFPIS 600
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GCTLNVLIN 10
GCTLN I+
Sbjct: 592 GCTLNFPIS 600
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GCTLNVLIN 10
GCTLN I+
Sbjct: 582 GCTLNFPIS 590
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GCTLNVLIN 10
GCTLN I+
Sbjct: 575 GCTLNFPIS 583
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GCTLNVLIN 10
GCTLN I+
Sbjct: 580 GCTLNFPIS 588
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GCTLNVLIN 10
GCTLN I+
Sbjct: 579 GCTLNFPIS 587
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GCTLNVLIN 10
GCTLN I+
Sbjct: 579 GCTLNFPIS 587
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GCTLNVLIN 10
GCTLN I+
Sbjct: 583 GCTLNFPIS 591
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GCTLNVLIN 10
GCTLN I+
Sbjct: 581 GCTLNFPIS 589
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GCTLNVLIN 10
GCTLN I+
Sbjct: 579 GCTLNFPIS 587
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GCTLNVLIN 10
GCTLN I+
Sbjct: 582 GCTLNFPIS 590
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GCTLNVLIN 10
GCTLN I+
Sbjct: 583 GCTLNFPIS 591
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GCTLNVLIN 10
GCTLN I+
Sbjct: 577 GCTLNFPIS 585
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GCTLNVLIN 10
GCTLN I+
Sbjct: 588 GCTLNFPIS 596
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GCTLNVLIN 10
GCTLN I+
Sbjct: 587 GCTLNFPIS 595
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GCTLNVLIN 10
GCTLN I+
Sbjct: 581 GCTLNFPIS 589
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GCTLNVLIN 10
GCTLN I+
Sbjct: 582 GCTLNFPIS 590
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GCTLNVLIN 10
GCTLN I+
Sbjct: 586 GCTLNFPIS 594
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GCTLNVLIN 10
GCTLN I+
Sbjct: 582 GCTLNFPIS 590
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GCTLNVLIN 10
GCTLN I+
Sbjct: 582 GCTLNFPIS 590
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GCTLNVLIN 10
GCTLN I+
Sbjct: 594 GCTLNFPIS 602
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GCTLNVLIN 10
GCTLN I+
Sbjct: 582 GCTLNFPIS 590
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GCTLNVLIN 10
GCTLN I+
Sbjct: 594 GCTLNFPIS 602
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GCTLNVLIN 10
GCTLN I+
Sbjct: 594 GCTLNFPIS 602
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GCTLNVLIN 10
GCTLN I+
Sbjct: 581 GCTLNFPIS 589
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GCTLNVLIN 10
GCTLN I+
Sbjct: 584 GCTLNFPIS 592
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GCTLNVLIN 10
GCTLN I+
Sbjct: 582 GCTLNFPIS 590
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GCTLNVLIN 10
GCTLN I+
Sbjct: 577 GCTLNFPIS 585
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GCTLNVLIN 10
GCTLN I+
Sbjct: 577 GCTLNFPIS 585
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GCTLNVLIN 10
GCTLN I+
Sbjct: 578 GCTLNFPIS 586
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GCTLNVLIN 10
GCTLN I+
Sbjct: 582 GCTLNFPIS 590
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 1 GGCTLNVL 8
G CT N+L
Sbjct: 149 GNCTTNIL 156
>sp|GH_SHV21|ENVELOPE glycoprotein H|Saimiriine herpesvirus 2 (strain 11)
Query: 2 GCTLNVLIN 10
GC +N ++N
Sbjct: 287 GCNINNIVN 295
19|SequenceR|100|91|CKKGKGGCTL
>sp|VPP_BPP2|TERMINASE, ATPase subunit|Escherichia phage P2 (Bacteriophage P2)
Query: 5 KGGCTL 10
KGGCTL
Sbjct: 343 KGGCTL 348
>sp|Y091_OSHVF|UNCHARACTERIZED protein ORF91|Ostreid herpesvirus 1 (isolate France)
Query: 4 GKGGC 8
GKGGC
Sbjct: 330 GKGGC 334
>sp|RDRP_PMV|RNA replication protein|Papaya mosaic potexvirus (PMV)
Query: 1 CKKGKGGCTL 10
C+KGK T+
Sbjct: 645 CQKGKASITM 654
>sp|RDRP_CGMVS|REPLICASE large subunit|Cucumber green mottle mosaic virus
Query: 3 KGKGGC 8
KG GGC
Sbjct: 153 KGSGGC 158
>sp|RDRP_BPGA|RNA-DIRECTED RNA polymerase beta chain|Enterobacteria phage GA (Bacteriophage
Query: 3 KGKGGCTL 10
K KGGC L
Sbjct: 441 KFKGGCNL 448
>sp|ENV_OMVVS|ENVELOPE glycoprotein gp160|Ovine maedi visna related virus
Query: 1 CKKGKGGC 8
CK GGC
Sbjct: 305 CKTSPGGC 312
>sp|ENV_CAEVG|ENVELOPE glycoprotein|Caprine arthritis encephalitis virus (strain
Query: 1 CKKGKGGC 8
C+K GGC
Sbjct: 273 CQKRPGGC 280
>sp|Y166_ABVP|PUTATIVE transmembrane protein ORF166|Acidianus bottle-shaped virus (isolate
Query: 1 CKKGKGGC 8
C+ GKG C
Sbjct: 93 CQSGKGEC 100
>sp|GLYCO_ARAV|GLYCOPROTEIN virus (ARAV)
Query: 1 CKKGKGGC 8
C K GGC
Sbjct: 363 CLKAGGGC 370
>sp|ENV_CAEVC|ENVELOPE glycoprotein|Caprine arthritis encephalitis virus (strain
Query: 1 CKKGKGGC 8
C+K GGC
Sbjct: 276 CQKRPGGC 283
20|SequenceR|105|96|PNEPLCKKGK
>sp|CVC2_HHV8P|CAPSID vertex component 2|Human herpesvirus 8 type P
Query: 1 PNEPLCKKGK 10
PN P+ K+G+
Sbjct: 405 PNAPMLKRGQ 414
>sp|GT313_AFV1Y|PUTATIVE glycosyltransferase ORF313|Acidianus filamentous virus 1 (isolate
Query: 2 NEPLCKK 8
NEP C K
Sbjct: 176 NEPFCHK 182
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 NEPLCKKGK 10
++P CK+G+
Sbjct: 2523 DKPACKRGR 2531
>sp|ETFL_ASFB7|EARLY transcription factor large subunit|African swine fever virus (strain
Query: 2 NEPLCKKGK 10
N+P CKK +
Sbjct: 1277 NQPQCKKKR 1285
>sp|DPOL_BPKVM|DNA-DIRECTED DNA polymerase|Vibrio phage KVP40 (isolate Vibrio
Query: 4 PLCKKG 9
PLC+KG
Sbjct: 689 PLCQKG 694
>sp|HEMA_CVMDV|HEMAGGLUTININ-ESTERASE coronavirus (strain DVIM) (MHV-DVIM)
Query: 2 NEPLCKKGK 10
N LCK GK
Sbjct: 65 NPELCKSGK 73
>sp|GO_HCMVM|ENVELOPE glycoprotein O|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 NEPLCK 7
NEP CK
Sbjct: 347 NEPFCK 352
>sp|POL_JSRV|GAG-PRO-POL polyprotein|Sheep pulmonary adenomatosis virus (Jaagsiekte
Query: 4 PLCKKGK 10
P CKKGK
Sbjct: 537 PRCKKGK 543
>sp|VF439_IIV3|PROBABLE kinase 098L|Invertebrate iridescent virus 3 (IIV-3)
Query: 2 NEPLCKKG 9
N PL KKG
Sbjct: 384 NSPLLKKG 391
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 PNEPLC 6
P+EPLC
Sbjct: 2852 PSEPLC 2857
>sp|L_LNYV3|RNA-DIRECTED RNA polymerase L|Lettuce necrotic yellows virus (isolate
Query: 1 PNEPLCKKG 9
PN +C KG
Sbjct: 1561 PNSIICPKG 1569
>sp|RDRP_THOGV|RNA-DIRECTED RNA polymerase catalytic subunit|Thogoto virus (isolate SiAr 126)
Query: 1 PNEPLCKKG 9
PN P+ +KG
Sbjct: 597 PNNPVTQKG 605
>sp|PRO_JSRV|GAG-PRO polyprotein|Sheep pulmonary adenomatosis virus (Jaagsiekte
Query: 4 PLCKKGK 10
P CKKGK
Sbjct: 537 PRCKKGK 543
>sp|CAPSD_RRSVT|INNER capsid protein VP3|Rice ragged stunt virus (isolate
Query: 2 NEPLCK 7
N+P+CK
Sbjct: 766 NDPICK 771
>sp|RPOA_SHFV|REPLICASE polyprotein 1ab|Simian hemorrhagic fever virus (SHFV)
Query: 1 PNEPLC 6
PN P+C
Sbjct: 715 PNRPMC 720
>sp|GAG_JSRV|GAG polyprotein|Sheep pulmonary adenomatosis virus (Jaagsiekte
Query: 4 PLCKKGK 10
P CKKGK
Sbjct: 537 PRCKKGK 543
21|SequenceR|110|101|LLLETPNEPL
>sp|YL007_MIMIV|UNCHARACTERIZED protein L7|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 LLETPNEP 9
L+ETP EP
Sbjct: 103 LVETPQEP 110
>sp|YR337_MIMIV|UNCHARACTERIZED cullin-like protein R337|Acanthamoeba polyphaga mimivirus (APMV)
Query: 3 LETPNEP 9
LE PNEP
Sbjct: 257 LEDPNEP 263
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 LLLETPNEP 9
++ETPN P
Sbjct: 3870 FMVETPNGP 3878
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 LLLETPNEP 9
++ETPN P
Sbjct: 3870 FMVETPNGP 3878
>sp|SPIKE_IBVM|SPIKE glycoprotein|Avian infectious bronchitis virus (strain
Query: 1 LLLETPNEP 9
LLL TP+ P
Sbjct: 679 LLLTTPSSP 687
>sp|GO_HHV6Z|130 kDa Glycoprotein O|Human herpesvirus 6B (strain Z29)
Query: 2 LLETPNEPL 10
LL TP EPL
Sbjct: 619 LLTTPKEPL 627
>sp|GO_HHV6U|120 kDa Glycoprotein O|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LLLETPNEPL 10
LL TP EPL
Sbjct: 592 LLTTTPKEPL 601
>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41
Query: 2 LLETPNEP 9
L TPNEP
Sbjct: 249 LPSTPNEP 256
22|SequenceR|115|106|LRKPTLLLET
>sp|YR008_MIMIV|UNCHARACTERIZED putative helicase R8|Acanthamoeba polyphaga mimivirus (APMV)
Query: 3 KPTLLLET 10
KPT+LLET
Sbjct: 251 KPTILLET 258
>sp|V51K_BPL79|51.5 kDa protein|Lactococcus phage (isolate 7-9) (Lactococcus
Query: 1 LRKPTLLL 8
LRKPTL++
Sbjct: 70 LRKPTLII 77
>sp|HEMA_I71A2|HEMAGGLUTININ A virus (strain A/Turkey/Oregon/1971
Query: 1 LRKPTLLLET 10
+R+P+LLL T
Sbjct: 318 VRQPSLLLAT 327
>sp|GP_PHV|ENVELOPMENT polyprotein|Prospect Hill virus (PHV)
Query: 4 PTLLLET 10
PTL+LET
Sbjct: 117 PTLVLET 123
>sp|RDRP_AMV|RNA-DIRECTED RNA polymerase 2a|Alfalfa mosaic virus (AMV)
Query: 1 LRKPTLLLE 9
LR+P+L LE
Sbjct: 732 LRRPSLYLE 740
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 4 PTLLLET 10
PTL+LET
Sbjct: 115 PTLVLET 121
23|SequenceR|120|111|SVLSALRKPT
***** No hits found ******
24|SequenceR|125|116|STHSPSVLSA
>sp|Y097_OSHVF|PUTATIVE RING finger protein ORF97|Ostreid herpesvirus 1 (isolate France)
Query: 1 STHSPSVLSA 10
STH P++ SA
Sbjct: 57 STHVPAIPSA 66
>sp|VOLD_BPP2|OLD nuclease|Escherichia phage P2 (Bacteriophage P2)
Query: 1 STHSPSVLSA 10
STHS S+LSA
Sbjct: 330 STHSASMLSA 339
>sp|VG66_BPML5|GENE 66 protein|Mycobacterium phage L5 (Mycobacteriophage L5)
Query: 2 THSPSVLS 9
THSP +LS
Sbjct: 161 THSPMILS 168
25|SequenceR|130|121|VLCNSSTHSP
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 CNSSTHSP 10
CN ++HSP
Sbjct: 363 CNQASHSP 370
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 CNSSTHSP 10
CN ++HSP
Sbjct: 363 CNQASHSP 370
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 CNSSTHSP 10
CN ++HSP
Sbjct: 363 CNQASHSP 370
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 CNSSTHSP 10
CN ++HSP
Sbjct: 363 CNQASHSP 370
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 CNSSTHSP 10
CN ++HSP
Sbjct: 363 CNQASHSP 370
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 CNSSTHSP 10
CN ++HSP
Sbjct: 363 CNQASHSP 370
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 CNSSTHSP 10
CN ++HSP
Sbjct: 363 CNQASHSP 370
>sp|POL2_BAYMG|GENOME polyprotein 2|Barley yellow mosaic virus (isolate
Query: 1 VLCNSSTHSP 10
+LC ++H+P
Sbjct: 102 ILCADASHAP 111
>sp|POL2_BAYMY|GENOME polyprotein 2|Barley yellow mosaic virus (isolate
Query: 1 VLCNSSTHSP 10
+LC ++H+P
Sbjct: 102 ILCADASHAP 111
>sp|POL2_BAYMJ|GENOME polyprotein 2|Barley yellow mosaic virus (strain
Query: 1 VLCNSSTHSP 10
+LC ++H+P
Sbjct: 102 ILCADASHAP 111
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 LCNSSTH 8
LCNS+ H
Sbjct: 663 LCNSTKH 669
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 LCNSSTH 8
LCNS+ H
Sbjct: 663 LCNSTKH 669
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 VLCNSSTHSP 10
VLC+ H+P
Sbjct: 458 VLCHPRLHTP 467
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VLCNSSTHSP 10
VLC+ H+P
Sbjct: 458 VLCHPRLHTP 467
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 VLCNSSTHSP 10
VLC+ H+P
Sbjct: 458 VLCHPRLHTP 467
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 LCNSSTH 8
LC +STH
Sbjct: 2727 LCRNSTH 2733
26|SequenceR|135|126|EMITIVLCNS
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 MITIVLC 8
M+TI+LC
Sbjct: 1229 MVTIMLC 1235
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 MITIVLC 8
M+TI+LC
Sbjct: 1211 MVTILLC 1217
>sp|SPIKE_BCHK3|SPIKE glycoprotein|Bat coronavirus HKU3 (BtCoV) (SARS-like
Query: 2 MITIVLC 8
M+TI+LC
Sbjct: 1198 MVTILLC 1204
>sp|SPIKE_BC279|SPIKE glycoprotein|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)
Query: 2 MITIVLC 8
M+TI+LC
Sbjct: 1197 MVTILLC 1203
>sp|SPIKE_BCRP3|SPIKE glycoprotein|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like
Query: 2 MITIVLC 8
M+TI+LC
Sbjct: 1197 MVTILLC 1203
27|SequenceR|140|131|SERQVEMITI
>sp|GT315_ABVP|PUTATIVE glycosyltransferase ORF315|Acidianus bottle-shaped virus (isolate
Query: 1 SERQVEMITI 10
SERQ + IT+
Sbjct: 140 SERQYDFITV 149
28|SequenceR|145|136|SLSPSSERQV
***** No hits found ******
29|SequenceR|150|141|VVPTSSLSPS
>sp|YL389_MIMIV|UNCHARACTERIZED protein L389|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 VPTSSLSPS 10
VPT+S +PS
Sbjct: 100 VPTTSRNPS 108
30|SequenceR|155|146|PRYFEVVPTS
>sp|GP_INSV|ENVELOPMENT polyprotein|Impatiens necrotic spot virus (INSV)
Query: 1 PRYFEVVP 8
PR FE VP
Sbjct: 139 PRSFETVP 146
>sp|YOR1_BHV1S|UNCHARACTERIZED 16.1 kDa protein|Bovine herpesvirus 1.2 (strain ST)
Query: 1 PRYFEVVPTS 10
P YF VVP+S
Sbjct: 58 PDYFPVVPSS 67
31|SequenceR|160|151|SDFSAPRYFE
>sp|Y017_HVAVE|UNCHARACTERIZED protein ORF17|Heliothis virescens ascovirus 3e (HvAV-3e)
Query: 1 SDFSAPRY 8
SDFS+PRY
Sbjct: 32 SDFSSPRY 39
>sp|CAPSD_CRSVL|CAPSID protein|Carnation ringspot virus (isolate Lommel)
Query: 1 SDFSAPRYF 9
S F+ PRYF
Sbjct: 290 SQFTTPRYF 298
>sp|CATV_NPVMC|VIRAL cathepsin|Mamestra configurata nucleopolyhedrovirus (MacoNPV)
Query: 4 SAPRYFE 10
SAP YFE
Sbjct: 35 SAPLYFE 41
>sp|CATV_NPVSE|VIRAL cathepsin|Spodoptera exigua nuclear polyhedrosis virus
Query: 4 SAPRYFE 10
SAP YFE
Sbjct: 35 SAPLYFE 41
32|SequenceR|165|156|SVTTVSDFSA
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 SVTTVSDFSA 10
S+TT+S F++
Sbjct: 830 SITTISTFTS 839
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 SVTTVSDFSA 10
S+TT+S F++
Sbjct: 830 SITTISTFTS 839
33|SequenceR|170|161|VTWNHSVTTV
>sp|CAPSD_PVMR|CAPSID protein|Potato virus M (strain Russian)
Query: 1 VTWNHSVT 8
VTWNH +T
Sbjct: 202 VTWNHMLT 209
>sp|CAPSD_PVMG|CAPSID protein|Potato virus M (strain German)
Query: 1 VTWNHSVT 8
VTWNH +T
Sbjct: 202 VTWNHMLT 209
>sp|VP2_POVJC|MINOR capsid protein VP2|JC polyomavirus (JCPyV) (JCV)
Query: 3 WNHSVTTV 10
W+H V+TV
Sbjct: 105 WDHKVSTV 112
>sp|VP2_POVBK|MINOR capsid protein VP2|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 3 WNHSVTTV 10
W+H V+TV
Sbjct: 105 WDHKVSTV 112
>sp|VP2_POVBA|MINOR capsid protein VP2|BK polyomavirus (strain AS) (BKPyV)
Query: 3 WNHSVTTV 10
W+H V+TV
Sbjct: 105 WDHKVSTV 112
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 VTWNHSVTTV 10
V WNH + V
Sbjct: 61 VLWNHPIQRV 70
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 VTWNHSVTTV 10
V WNH + V
Sbjct: 61 VLWNHPIQRV 70
>sp|VP2_SV40|MINOR capsid protein VP2|Simian virus 40 (SV40)
Query: 3 WNHSVTTV 10
W+H V+TV
Sbjct: 104 WDHKVSTV 111
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 1 VTWNHSVTTV 10
V WNH + V
Sbjct: 61 VLWNHPIQRV 70
>sp|VP2_POVS1|MINOR capsid protein VP2|Simian virus 12 (strain wt100)
Query: 3 WNHSVTTV 10
W+H ++TV
Sbjct: 104 WDHKISTV 111
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 1 VTWNHSVTTV 10
V WNH + V
Sbjct: 61 VFWNHPIQRV 70
>sp|POLG_BSTVG|GENOME polyprotein|Brome streak virus (strain German)
Query: 3 WNHSVTT 9
W H +TT
Sbjct: 15 WRHRITT 21
>sp|POLG_BSTV1|GENOME polyprotein|Brome streak virus (strain 11-Cal)
Query: 3 WNHSVTT 9
W H +TT
Sbjct: 2182 WRHRITT 2188
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 VTWNHSVTTV 10
V WNH + V
Sbjct: 61 VFWNHPIQRV 70
>sp|GLYCO_MMVR|GLYCOPROTEIN mosaic virus (isolate Maize/United
Query: 2 TWNHSVTTV 10
+W HS++T+
Sbjct: 514 SWTHSISTI 522
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 VTWNHSVTTV 10
V WNH + V
Sbjct: 61 VFWNHPIQRV 70
>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)
Query: 3 WNHSVT 8
W HSVT
Sbjct: 6126 WRHSVT 6131
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 VTWNHSVTTV 10
V WNH + V
Sbjct: 61 VFWNHPIQRV 70
>sp|CAPSD_BOTVX|CAPSID protein|Botrytis virus X (isolate Botrytis
Query: 1 VTWNHSVT 8
V WNH +T
Sbjct: 299 VVWNHLLT 306
>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)
Query: 3 WNHSVT 8
W HSVT
Sbjct: 6126 WRHSVT 6131
>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)
Query: 3 WNHSVT 8
W HSVT
Sbjct: 6126 WRHSVT 6131
>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)
Query: 3 WNHSVT 8
W HSVT
Sbjct: 6126 WRHSVT 6131
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 WNHSVT 8
W HSVT
Sbjct: 6126 WRHSVT 6131
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 WNHSV 7
WNHSV
Sbjct: 6129 WNHSV 6133
>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like
Query: 3 WNHSV 7
WNHSV
Sbjct: 6127 WNHSV 6131
>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)
Query: 3 WNHSV 7
WNHSV
Sbjct: 6135 WNHSV 6139
>sp|MATRX_TRTV|MATRIX protein|Turkey rhinotracheitis virus (TRTV)
Query: 2 TWNHSVT 8
TWNH T
Sbjct: 241 TWNHQRT 247
>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like
Query: 3 WNHSV 7
WNHSV
Sbjct: 6123 WNHSV 6127
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 VTWNHSVTTV 10
V WNH + V
Sbjct: 61 VFWNHPIQRV 70
34|SequenceR|175|166|STCNWVTWNH
>sp|DPOL_ADECC|DNA polymerase|Canine adenovirus serotype 1 (strain
Query: 1 STCNWVTWN 9
+T NW TWN
Sbjct: 269 TTQNWDTWN 277
>sp|NSS_CCHFI|NON-STRUCTURAL protein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 STCNWVT 7
STC+W+T
Sbjct: 78 STCSWLT 84
>sp|L_CPSVP|RNA-DIRECTED RNA polymerase L|Citrus psorosis virus (isolate Spain/P-121)
Query: 5 WVTWNH 10
W+ W+H
Sbjct: 109 WIKWDH 114
>sp|YL676_MIMIV|UNCHARACTERIZED protein L676|Acanthamoeba polyphaga mimivirus (APMV)
Query: 4 NWVTWNH 10
+W+TW H
Sbjct: 90 DWITWTH 96
>sp|REP_PICV|REPLICATION-ASSOCIATED protein|Pigeon circovirus (PiCV) (Columbid circovirus)
Query: 5 WVTWNH 10
W+ WNH
Sbjct: 295 WLVWNH 300
>sp|Y05G_BPT4|UNCHARACTERIZED 38.9 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)
Query: 3 CNWVTWNH 10
C WV NH
Sbjct: 184 CEWVFHNH 191
>sp|U1_MDV1|PROTEIN U1|Milk vetch dwarf virus (isolate
Query: 1 STCNWVT 7
+TC W+T
Sbjct: 122 NTCKWIT 128
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 TCNWVTW 8
TC W++W
Sbjct: 1971 TCFWLSW 1977
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 TCNWVTW 8
TC W++W
Sbjct: 1971 TCFWLSW 1977
>sp|PG125_VAR67|SCAFFOLD protein OPG125|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 STCNWVTW 8
S+CN V W
Sbjct: 101 SSCNGVIW 108
>sp|PG125_VACCW|SCAFFOLD protein OPG125|Vaccinia virus (strain Western Reserve)
Query: 1 STCNWVTW 8
S+CN V W
Sbjct: 101 SSCNGVIW 108
>sp|PG125_VACCT|SCAFFOLD protein OPG125|Vaccinia virus (strain Tian Tan)
Query: 1 STCNWVTW 8
S+CN V W
Sbjct: 101 SSCNGVIW 108
>sp|PG125_VACCC|SCAFFOLD protein OPG125|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 STCNWVTW 8
S+CN V W
Sbjct: 101 SSCNGVIW 108
>sp|PG125_VACCA|SCAFFOLD protein OPG125|Vaccinia virus (strain Ankara) (VACV)
Query: 1 STCNWVTW 8
S+CN V W
Sbjct: 101 SSCNGVIW 108
>sp|PG125_MONPV|SCAFFOLD protein OPG125|Monkeypox virus (MPXV)
Query: 1 STCNWVTW 8
S+CN V W
Sbjct: 101 SSCNGVIW 108
>sp|D13_VARV|SCAFFOLD protein D13|Variola virus
Query: 1 STCNWVTW 8
S+CN V W
Sbjct: 101 SSCNGVIW 108
>sp|YR118_MIMIV|UNCHARACTERIZED protein R118|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 TCNWVTWN 9
T +W TWN
Sbjct: 276 TNDWTTWN 283
>sp|X_ASHV|PROTEIN X|Arctic squirrel hepatitis virus (ASHV)
Query: 1 STCNWVTWN 9
ST N+VTW+
Sbjct: 83 STMNFVTWH 91
>sp|POLG_BYMV|GENOME polyprotein|Bean yellow mosaic virus
Query: 1 STCNWVTW 8
S CN+VT+
Sbjct: 2372 SKCNYVTY 2379
>sp|CAPSD_BNYVS|CAPSID readthrough protein|Beet necrotic yellow vein virus
Query: 5 WVTWNH 10
WV W H
Sbjct: 216 WVGWKH 221
>sp|US14_HCMVM|MEMBRANE protein US14|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 CNWVTWNH 10
CN V W H
Sbjct: 168 CNGVAWEH 175
>sp|POLG_TUMVQ|GENOME polyprotein|Turnip mosaic virus (strain Quebec)
Query: 2 TCNWVT 7
TCN+VT
Sbjct: 2466 TCNYVT 2471
>sp|US14_HCMVA|UNCHARACTERIZED protein HVLF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 CNWVTWNH 10
CN V W H
Sbjct: 168 CNGVAWEH 175
>sp|POLG_TUMVJ|GENOME polyprotein|Turnip mosaic virus (strain Japanese)
Query: 2 TCNWVT 7
TCN+VT
Sbjct: 2467 TCNYVT 2472
>sp|VP22_BPAPS|PUTATIVE protein p22|Acyrthosiphon pisum secondary endosymbiont phage
Query: 2 TCNWVTWNH 10
TC WV H
Sbjct: 57 TCQWVLKTH 65
>sp|POLG_ASGVK|GENOME polyprotein|Apple stem grooving virus (strain
Query: 2 TCNWVTW 8
TCN + W
Sbjct: 252 TCNGIQW 258
>sp|POL1_RCMV|RNA1 polyprotein|Red clover mottle virus (RCMV)
Query: 1 STCNWVTWN 9
S C+ TWN
Sbjct: 1759 SNCHSFTWN 1767
>sp|GB_EHV4|ENVELOPE glycoprotein B|Equine herpesvirus 4 (strain 1942)
Query: 1 STCNWVTWNH 10
S W+ W H
Sbjct: 220 SYVGWMPWRH 229
>sp|B17_VARV|PROTEIN B17|Variola virus
Query: 3 CNWVT 7
CNWV+
Sbjct: 95 CNWVS 99
>sp|B17_VAR67|PROTEIN B17|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 CNWVT 7
CNWV+
Sbjct: 95 CNWVS 99
>sp|GB_EHV1V|ENVELOPE glycoprotein B|Equine herpesvirus 1 (strain V592)
Query: 1 STCNWVTWNH 10
S W+ W H
Sbjct: 279 SYVGWMPWRH 288
>sp|GB_EHV1D|ENVELOPE glycoprotein B|Equine herpesvirus 1 (strain Kentucky
Query: 1 STCNWVTWNH 10
S W+ W H
Sbjct: 279 SYVGWMPWRH 288
>sp|GB_EHV1B|ENVELOPE glycoprotein B|Equine herpesvirus 1 (strain Ab4p)
Query: 1 STCNWVTWNH 10
S W+ W H
Sbjct: 279 SYVGWMPWRH 288
>sp|GB_EHV1|ENVELOPE glycoprotein B|Equine herpesvirus 1 (strain HVS25A)
Query: 1 STCNWVTWNH 10
S W+ W H
Sbjct: 279 SYVGWMPWRH 288
>sp|GB_EHV1A|ENVELOPE glycoprotein B|Equine herpesvirus 1 (strain AB1)
Query: 1 STCNWVTWNH 10
S W+ W H
Sbjct: 279 SYVGWMPWRH 288
>sp|B17_VACCW|PROTEIN B17|Vaccinia virus (strain Western Reserve)
Query: 3 CNWVT 7
CNWV+
Sbjct: 95 CNWVS 99
>sp|X_WHV3|PROTEIN X|Woodchuck hepatitis B virus (isolate
Query: 1 STCNWVTWN 9
ST N+V+W+
Sbjct: 83 STVNFVSWH 91
>sp|X_WHV6|PROTEIN X|Woodchuck hepatitis B virus (isolate
Query: 1 STCNWVTWN 9
ST N+V+W+
Sbjct: 83 STVNFVSWH 91
>sp|YR390_MIMIV|UNCHARACTERIZED protein R390|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 TCNW 5
TCNW
Sbjct: 194 TCNW 197
>sp|B17_VACCC|PROTEIN B17|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 CNWVT 7
CNWV+
Sbjct: 95 CNWVS 99
>sp|X_WHV1|PROTEIN X|Woodchuck hepatitis B virus (isolate
Query: 1 STCNWVTWN 9
ST N+V+W+
Sbjct: 83 STVNFVSWH 91
>sp|VP4_ROTBS|OUTER capsid protein VP4|Rotavirus C (isolate
Query: 4 NWVTWNH 10
NW W H
Sbjct: 196 NWEEWTH 202
>sp|VP4_ROTPC|OUTER capsid protein VP4|Rotavirus C (strain RVC/Pig/United
Query: 1 STCNWVTWNH 10
S NW W H
Sbjct: 193 SIFNWEEWKH 202
35|SequenceR|180|171|TQFLLSTCNW
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 4 LLSTCNW 10
LLS C+W
Sbjct: 353 LLSNCDW 359
>sp|RFCS2_MIMIV|PUTATIVE replication factor C small|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 TQFLLSTCN 9
T+F+L CN
Sbjct: 210 TKFILDNCN 218
>sp|TERM_ADE40|PRETERMINAL protein|Human adenovirus F serotype 40
Query: 2 QFLLSTCN 9
Q+L+ TCN
Sbjct: 88 QYLVRTCN 95
>sp|TERM_ADE12|PRETERMINAL protein|Human adenovirus A serotype 12
Query: 2 QFLLSTCN 9
Q+L+ TCN
Sbjct: 53 QYLVRTCN 60
>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7
Query: 2 QFLLSTCN 9
Q+L+ TCN
Sbjct: 70 QYLVRTCN 77
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 2 QFLLSTCN 9
Q+L+ TCN
Sbjct: 88 QYLVRTCN 95
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 2 QFLLSTCN 9
Q+L+ TCN
Sbjct: 88 QYLVRTCN 95
>sp|RDRP_BSNV|RNA-DIRECTED RNA polymerase|Blotched snakehead virus (BSNV) (Channa
Query: 1 TQFLLSTCNW 10
T LLST +W
Sbjct: 332 THLLLSTISW 341
>sp|Y147_AFV2P|UNCHARACTERIZED protein ORF147|Acidianus filamentous virus 2 (isolate
Query: 3 FLLSTCNW 10
++LST NW
Sbjct: 61 YILSTINW 68
>sp|U21_HHV6U|GLYCOPROTEIN U21|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 QFLLSTCN 9
Q+L+S+CN
Sbjct: 192 QYLISSCN 199
>sp|U21_HHV6Z|U21 glycoprotein|Human herpesvirus 6B (strain Z29)
Query: 2 QFLLSTCN 9
Q+L+S+CN
Sbjct: 192 QYLISSCN 199
>sp|TERM_ADECC|PRETERMINAL protein|Canine adenovirus serotype 1 (strain
Query: 2 QFLLSTCN 9
Q+L+ TCN
Sbjct: 88 QYLVRTCN 95
>sp|NEC1_VZVD|NUCLEAR egress protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 TQFLLSTC 8
T FLLS C
Sbjct: 276 TTFLLSVC 283
>sp|NS1AB_TASV1|NON-STRUCTURAL polyprotein 1AB|Turkey astrovirus 1 (TAstV-1)
Query: 5 LSTCNW 10
LSTC W
Sbjct: 1254 LSTCGW 1259
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 TQFLLSTCNW 10
T++L+ T NW
Sbjct: 245 TRYLMKTENW 254
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 TQFLLSTCNW 10
T++L+ T NW
Sbjct: 245 TRYLMKTENW 254
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 TQFLLSTCNW 10
T++L+ T NW
Sbjct: 245 TRYLMKTENW 254
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 TQFLLSTCNW 10
T++L+ T NW
Sbjct: 245 TRYLMKTENW 254
>sp|YL232_MIMIV|PUTATIVE serine/threonine-protein kinase L232|Acanthamoeba polyphaga
Query: 3 FLLSTCN 9
FLLS CN
Sbjct: 485 FLLSNCN 491
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 TQFLLSTCNW 10
T++L+ T NW
Sbjct: 245 TRYLMKTENW 254
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 TQFLLSTCNW 10
T++L+ T NW
Sbjct: 245 TRYLMKTENW 254
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 TQFLLSTCNW 10
T++L+ T NW
Sbjct: 245 TRYLMKTENW 254
>sp|TERM_ADECR|PRETERMINAL protein|Canine adenovirus serotype 1 (strain
Query: 2 QFLLSTCN 9
Q+L+ TCN
Sbjct: 203 QYLVRTCN 210
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 TQFLLSTCNW 10
T++L+ T NW
Sbjct: 245 TRYLMKTENW 254
>sp|Y148_TNAVC|UNCHARACTERIZED protein ORF148|Trichoplusia ni ascovirus 2c (TnAV-2c)
Query: 2 QFLLSTCNW 10
QF++ T +W
Sbjct: 70 QFIMKTASW 78
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 1 TQFLLSTCNW 10
T++L+ T NW
Sbjct: 172 TRYLMKTENW 181
>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)
Query: 3 FLLSTCNW 10
F+LST +W
Sbjct: 2344 FMLSTLHW 2351
>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)
Query: 3 FLLSTCNW 10
F+LST +W
Sbjct: 2344 FMLSTLHW 2351
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 FLLSTCNW 10
F+LST +W
Sbjct: 2344 FMLSTLHW 2351
>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)
Query: 3 FLLSTCNW 10
F+LST +W
Sbjct: 2344 FMLSTLHW 2351
36|SequenceR|185|176|LVRISTQFLL
>sp|HEMA_PTV10|HEMAGGLUTININ-ESTERASE torovirus (strain P10) (PoTV)
Query: 1 LVRISTQFLL 10
+V++STQF+L
Sbjct: 189 VVKVSTQFVL 198
>sp|POLG_BYMV|GENOME polyprotein|Bean yellow mosaic virus
Query: 2 VRISTQFLL 10
VRI T+FLL
Sbjct: 750 VRIDTKFLL 758
>sp|MVP_BYMV|P3N-PIPO polyprotein|Bean yellow mosaic virus
Query: 2 VRISTQFLL 10
VRI T+FLL
Sbjct: 750 VRIDTKFLL 758
>sp|ENV_SIVMB|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate MB66)
Query: 4 ISTQFLL 10
+STQFLL
Sbjct: 279 VSTQFLL 285
37|SequenceR|190|181|GLLWVLVRIS
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 GLLWVLVR 8
GLLWVL R
Sbjct: 510 GLLWVLSR 517
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 GLLWVLVR 8
GLLWVL R
Sbjct: 510 GLLWVLSR 517
>sp|AN_ELHVK|ALKALINE nuclease|Elephantid herpesvirus 1 (isolate Asian
Query: 2 LLWVLVR 8
LLW LVR
Sbjct: 129 LLWFLVR 135
>sp|M2_I89A7|MATRIX protein 2|Influenza A virus (strain A/Equine/Jillin/1/1989
Query: 2 LLWVLVRIS 10
+LW+L R+S
Sbjct: 39 ILWILDRLS 47
>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A
Query: 1 GLLWVLVR 8
G+ W+LVR
Sbjct: 446 GMRWLLVR 453
38|SequenceR|195|186|SFYLLGLLWV
>sp|RP132_FOWPN|DNA-DIRECTED RNA polymerase 132 kDa|Fowlpox virus (strain NVSL) (FPV)
Query: 2 FYLLGLL 8
FYLLGLL
Sbjct: 320 FYLLGLL 326
>sp|CAPSD_CLVK|CAPSID protein|African cassava mosaic virus (isolate
Query: 1 SFYLLGLLWV 10
S Y+LG +W+
Sbjct: 114 SIYILGKIWL 123
>sp|CAPSD_TYCSV|CAPSID protein|Tomato yellow leaf curl Sardinia
Query: 1 SFYLLGLLWV 10
S Y+LG +W+
Sbjct: 113 SIYILGKIWM 122
>sp|CAPSD_TYCS2|CAPSID protein|Tomato yellow leaf curl Sardinia
Query: 1 SFYLLGLLWV 10
S Y+LG +W+
Sbjct: 113 SIYILGKIWM 122
>sp|CAPSD_TYCS1|CAPSID protein|Tomato yellow leaf curl Sardinia
Query: 1 SFYLLGLLWV 10
S Y+LG +W+
Sbjct: 113 SIYILGKIWM 122
>sp|CAPSD_ICMV|CAPSID protein|Indian cassava mosaic virus (ICMV)
Query: 1 SFYLLGLLWV 10
S Y+LG +W+
Sbjct: 113 SIYILGKIWM 122
>sp|CAPSD_CLVN|CAPSID protein|African cassava mosaic virus (isolate
Query: 1 SFYLLGLLWV 10
S Y+LG +W+
Sbjct: 114 SIYILGKIWM 123
>sp|CAPSD_TMOV|CAPSID protein|Tomato mottle virus (isolate Florida)
Query: 1 SFYLLGLLWV 10
S Y+LG +W+
Sbjct: 108 SVYILGKIWM 117
>sp|CAPSD_TGMVY|CAPSID protein|Tomato golden mosaic virus (strain
Query: 1 SFYLLGLLWV 10
S Y+LG +W+
Sbjct: 104 SVYILGKIWM 113
>sp|CAPSD_SLCV|CAPSID protein|Squash leaf curl virus (SLCV)
Query: 1 SFYLLGLLWV 10
S Y+LG +W+
Sbjct: 108 SVYILGKIWM 117
>sp|CAPSD_PYMVV|CAPSID protein|Potato yellow mosaic virus (isolate
Query: 1 SFYLLGLLWV 10
S Y+LG +W+
Sbjct: 108 SVYILGKIWM 117
>sp|CAPSD_PHUV|CAPSID protein|Pepper huasteco yellow vein virus
Query: 1 SFYLLGLLWV 10
S Y+LG +W+
Sbjct: 108 SVYILGKIWM 117
>sp|CAPSD_CALCV|CAPSID protein|Cabbage leaf curl virus (isolate
Query: 1 SFYLLGLLWV 10
S Y+LG +W+
Sbjct: 108 SVYILGKIWM 117
>sp|CAPSD_BGYMV|CAPSID protein|Bean golden yellow mosaic virus
Query: 1 SFYLLGLLWV 10
S Y+LG +W+
Sbjct: 107 SVYILGKIWM 116
>sp|CAPSD_BGYMJ|CAPSID protein|Bean golden yellow mosaic virus
Query: 1 SFYLLGLLWV 10
S Y+LG +W+
Sbjct: 108 SVYILGKIWM 117
>sp|CAPSD_ABMVW|CAPSID protein|Abutilon mosaic virus (isolate West
Query: 1 SFYLLGLLWV 10
S Y+LG +W+
Sbjct: 108 SVYILGKIWM 117
>sp|CAPSD_TLCVA|CAPSID protein|Tomato leaf curl virus (strain
Query: 1 SFYLLGLLWV 10
S Y+LG +W+
Sbjct: 113 SIYVLGKIWM 122
>sp|CAPSD_LRVLG|MAJOR capsid protein|Leishmania RNA virus 1 -
Query: 2 FYLLGLL 8
FY+LGL+
Sbjct: 231 FYMLGLM 237
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 FYLLGL 7
FYLLGL
Sbjct: 2315 FYLLGL 2320
>sp|R1A_BCRP3|REPLICASE polyprotein 1a|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like
Query: 2 FYLLGL 7
FYLLGL
Sbjct: 2313 FYLLGL 2318
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 FYLLGL 7
FYLLGL
Sbjct: 2315 FYLLGL 2320
>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like
Query: 2 FYLLGL 7
FYLLGL
Sbjct: 2313 FYLLGL 2318
>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like
Query: 2 FYLLGL 7
FYLLGL
Sbjct: 2309 FYLLGL 2314
>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)
Query: 2 FYLLGL 7
FYLLGL
Sbjct: 2321 FYLLGL 2326
>sp|CAPSD_TYLCI|CAPSID protein|Tomato yellow leaf curl virus
Query: 1 SFYLLGLLWV 10
S Y LG +W+
Sbjct: 114 SIYFLGKVWM 123
>sp|R1A_BC279|REPLICASE polyprotein 1a|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)
Query: 2 FYLLGL 7
FYLLGL
Sbjct: 2321 FYLLGL 2326
>sp|R1A_BCHK3|REPLICASE polyprotein 1a|Bat coronavirus HKU3 (BtCoV) (SARS-like
Query: 2 FYLLGL 7
FYLLGL
Sbjct: 2309 FYLLGL 2314
>sp|RDRP_NCBVS|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Nudaurelia capensis beta virus (isolate
Query: 5 LGLLWV 10
LGL+WV
Sbjct: 299 LGLIWV 304
>sp|VG12_EHV2|PROTEIN E6A|Equine herpesvirus 2 (strain 86/87)
Query: 2 FYLLGLLW 9
FY GL W
Sbjct: 5 FYFYGLFW 12
>sp|RIR2_ALHV1|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Alcelaphine herpesvirus 1 (strain C500)
Query: 1 SFYLLGLLWV 10
SFY +GLL V
Sbjct: 164 SFYCIGLLRV 173
>sp|CAPSD_TYLCC|CAPSID protein|Tomato yellow leaf curl China
Query: 1 SFYLLGLLWV 10
S Y++G +W+
Sbjct: 113 SIYVIGKIWM 122
39|SequenceR|200|191|GLPLSSFYLL
>sp|RP132_FOWPN|DNA-DIRECTED RNA polymerase 132 kDa|Fowlpox virus (strain NVSL) (FPV)
Query: 1 GLPLSSFYLL 10
G+PL + YL+
Sbjct: 247 GMPLETIYLI 256
>sp|RDRP_SSDRV|RNA replication protein|Sclerotinia sclerotiorum
Query: 3 PLSSFYL 9
PLS FYL
Sbjct: 985 PLSPFYL 991
>sp|PORTL_BPHC1|PROBABLE portal protein|Haemophilus phage HP1 (strain HP1c1)
Query: 2 LPLSSFYL 9
+PLSS YL
Sbjct: 122 VPLSSLYL 129
40|SequenceR|205|196|VLLYIGLPLS
>sp|Y004_OSHVF|UNCHARACTERIZED protein ORF4|Ostreid herpesvirus 1 (isolate France)
Query: 1 VLLYIGLPLS 10
+ LY+G+P+S
Sbjct: 233 IQLYLGMPMS 242
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 1 VLLYIGLPLS 10
+LLY GLP S
Sbjct: 305 ILLYCGLPDS 314
>sp|YVCD_VACCC|UNCHARACTERIZED 7.9 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VLLYIGLPLS 10
+LL++G+PLS
Sbjct: 1 MLLHVGIPLS 10
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 4 YIGLPLS 10
Y GLPLS
Sbjct: 824 YAGLPLS 830
>sp|ORF3_PCV2|PROTEIN ORF3|Porcine circovirus 2 (PCV2)
Query: 3 LYIGLPLS 10
+YIGLP++
Sbjct: 38 VYIGLPIT 45
>sp|KP6T_UMV6|KP6 killer toxin|Ustilago maydis P6 virus (UmV6)
Query: 1 VLLYIGLPLS 10
VL+Y+GL L+
Sbjct: 6 VLMYLGLLLA 15
41|SequenceR|210|201|TVKKSVLLYI
***** No hits found ******
42|SequenceR|215|206|FVVGLTVKKS
>sp|MATRX_PIRYV|MATRIX protein|Piry virus (PIRYV)
Query: 2 VVGLTVKKS 10
++GL VKKS
Sbjct: 210 ILGLEVKKS 218
43|SequenceR|220|211|PVLSVFVVGL
>sp|X_WHV5|PROTEIN X|Woodchuck hepatitis B virus (isolate
Query: 1 PVLSVFVVG 9
P LS+FV+G
Sbjct: 123 PRLSIFVLG 131
>sp|X_WHV4|PROTEIN X|Woodchuck hepatitis B virus (isolate
Query: 1 PVLSVFVVG 9
P LS+FV+G
Sbjct: 123 PRLSIFVLG 131
>sp|X_WHV3|PROTEIN X|Woodchuck hepatitis B virus (isolate
Query: 1 PVLSVFVVG 9
P LS+FV+G
Sbjct: 123 PRLSIFVLG 131
>sp|X_WHV6|PROTEIN X|Woodchuck hepatitis B virus (isolate
Query: 1 PVLSVFVVG 9
P LS+FV+G
Sbjct: 123 PRLSIFVLG 131
>sp|X_WHV1|PROTEIN X|Woodchuck hepatitis B virus (isolate
Query: 1 PVLSVFVVG 9
P LS+FV+G
Sbjct: 123 PRLSIFVLG 131
44|SequenceR|225|216|IVLSSPVLSV
>sp|POLG_PYFV1|GENOME polyprotein|Parsnip yellow fleck virus (isolate
Query: 1 IVLSSPVLSV 10
I LSSPVLS+
Sbjct: 552 ISLSSPVLSI 561
>sp|YL064_MIMIV|UNCHARACTERIZED protein L64|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 IVLSSPVLS 9
I+L+SP LS
Sbjct: 96 IILASPTLS 104
>sp|YR311_MIMIV|PUTATIVE RING finger protein R311|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 IVLSSPVLSV 10
I+LSSP+ S+
Sbjct: 618 IILSSPLNSI 627
45|SequenceR|230|221|GYVMLIVLSS
>sp|FUS_AMPV1|FUSION glycoprotein F0|Avian metapneumovirus (isolate Canada
Query: 1 GYVMLIVL 8
G+VM+IVL
Sbjct: 490 GFVMVIVL 497
46|SequenceR|235|226|VCQCFGYVML
>sp|RIR1_EHV2|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Equine herpesvirus 2 (strain 86/87)
Query: 2 CQCFGYVML 10
CQCF Y L
Sbjct: 147 CQCFAYPSL 155
>sp|POLG_PESV|GENOME polyprotein|Porcine enteric sapovirus (isolate Swine/United
Query: 4 CFGYVML 10
CFGYV++
Sbjct: 699 CFGYVVI 705
>sp|TOP2_ASFWA|DNA topoisomerase 2|African swine fever virus (isolate
Query: 2 CQCFGYV 8
CQC YV
Sbjct: 227 CQCAAYV 233
>sp|TOP2_ASFP4|DNA topoisomerase 2|African swine fever virus (isolate
Query: 2 CQCFGYV 8
CQC YV
Sbjct: 227 CQCAAYV 233
>sp|TOP2_ASFM2|DNA topoisomerase 2|African swine fever virus (isolate
Query: 2 CQCFGYV 8
CQC YV
Sbjct: 227 CQCAAYV 233
>sp|TOP2_ASFK5|DNA topoisomerase 2|African swine fever virus (isolate
Query: 2 CQCFGYV 8
CQC YV
Sbjct: 227 CQCAAYV 233
>sp|TOP2_ASFB7|DNA topoisomerase 2|African swine fever virus (strain
Query: 2 CQCFGYV 8
CQC YV
Sbjct: 227 CQCAAYV 233
>sp|POL1_CRLVP|RNA1 polyprotein|Cherry rasp leaf virus (isolate
Query: 4 CFGYVML 10
CFGY+ L
Sbjct: 395 CFGYLNL 401
>sp|VC02_VACCT|KELCH repeat protein C2|Vaccinia virus (strain Tian Tan)
Query: 1 VCQCFGYVML 10
VC C Y+++
Sbjct: 444 VCSCGDYILI 453
>sp|VC02_VACCC|KELCH repeat protein C2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VCQCFGYVML 10
VC C Y+++
Sbjct: 444 VCSCGDYILI 453
>sp|C2_VACCW|KELCH repeat protein C2|Vaccinia virus (strain Western Reserve)
Query: 1 VCQCFGYVML 10
VC C Y+++
Sbjct: 444 VCSCGDYILI 453
>sp|C2_RABPU|KELCH repeat protein C2|Rabbitpox virus (strain Utrecht) (RPV)
Query: 1 VCQCFGYVML 10
VC C Y+++
Sbjct: 444 VCSCGDYILI 453
>sp|C2_ECTVM|KELCH repeat protein C2|Ectromelia virus (strain Moscow) (ECTV)
Query: 1 VCQCFGYVML 10
VC C Y+++
Sbjct: 444 VCSCGDYILI 453
>sp|C2_CWPXG|KELCH repeat protein C2|Cowpox virus (strain GRI-90 /
Query: 1 VCQCFGYVML 10
VC C Y+++
Sbjct: 444 VCSCGDYILI 453
>sp|C2_CAMPS|KELCH repeat protein C2|Camelpox virus (strain CMS)
Query: 1 VCQCFGYVML 10
VC C Y+++
Sbjct: 444 VCSCGDYILI 453
>sp|C2_CAMPM|KELCH repeat protein C2|Camelpox virus (strain M-96)
Query: 1 VCQCFGYVML 10
VC C Y+++
Sbjct: 444 VCSCGDYILI 453
>sp|DPOL_ADEB2|DNA polymerase|Bovine adenovirus 2 (BAdV-2) (Mastadenovirus
Query: 1 VCQCFGYV 8
VC C G+V
Sbjct: 903 VCTCCGHV 910
>sp|SPHR_AMEPV|SPHEROIDIN moorei entomopoxvirus (AmEPV)
Query: 1 VCQCFGYVML 10
VC+ GYV+L
Sbjct: 624 VCEYPGYVIL 633
47|SequenceR|240|231|LFEHCVCQCF
>sp|YL193_MIMIV|UNCHARACTERIZED glycosyltransferase L193|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 FEHCVCQCF 10
F C C C+
Sbjct: 423 FRMCYCSCY 431
>sp|YR713_MIMIV|UNCHARACTERIZED protein R713|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 FEHCVC 7
FE C+C
Sbjct: 323 FEQCIC 328
>sp|YORM_TTV1K|UNCHARACTERIZED 38.6 kDa protein|Thermoproteus tenax virus 1 (strain
Query: 2 FEHCVCQCF 10
F+ C+ C+
Sbjct: 283 FQQCISSCY 291
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 2 FEHCV 6
FEHC+
Sbjct: 2014 FEHCI 2018
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 2 FEHCV 6
FEHC+
Sbjct: 2013 FEHCI 2017
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 2 FEHCV 6
FEHC+
Sbjct: 2013 FEHCI 2017
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 2 FEHCV 6
FEHC+
Sbjct: 2013 FEHCI 2017
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 2 FEHCV 6
FEHC+
Sbjct: 2011 FEHCI 2015
>sp|R1A_PEDV7|REPLICASE polyprotein 1a|Porcine epidemic diarrhea virus (strain
Query: 4 HCVCQCF 10
HC C C+
Sbjct: 1431 HCKCFCY 1437
>sp|TIPK_LAMBD|TAIL tip assembly protein K|Escherichia phage lambda (Bacteriophage
Query: 2 FEHCVCQCF 10
FEH V C+
Sbjct: 66 FEHGVTDCY 74
>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain
Query: 4 HCVCQCF 10
HC C C+
Sbjct: 1431 HCKCFCY 1437
48|SequenceR|247|236|SPPAMCDLFEHC
>sp|POLG_BCMNN|GENOME polyprotein|Bean common mosaic necrosis virus
Query: 2 PPAMCDLFEH 11
PP M D F+H
Sbjct: 1087 PPKMEDFFKH 1096
>sp|GLYCO_NCMV|GLYCOPROTEIN cereal mosaic virus (NCMV)
Query: 2 PPAMCDLFEHC 12
PPA C L +C
Sbjct: 309 PPAKCRLIGNC 319
>sp|CAPSD_SSVN|CAPSID protein|Sugarcane streak virus (isolate South
Query: 1 SPPAMCDLFEH 11
+PP + D+F H
Sbjct: 124 NPPTVKDIFPH 134
>sp|SPIKE_FIPV|SPIKE glycoprotein|Feline coronavirus (strain FIPV WSU-79/1146)
Query: 5 MCDLFEHC 12
+C+ +EHC
Sbjct: 251 LCEDYEHC 258
>sp|POL1_TBRVM|RNA1 polyprotein|Tomato black ring virus (strain
Query: 1 SPPAMCDLFEH 11
SPP C F H
Sbjct: 6 SPPGDCFTFNH 16
>sp|1A_BMV|REPLICATION protein 1a|Brome mosaic virus (BMV)
Query: 6 CDLFEH 11
CDLF+H
Sbjct: 923 CDLFKH 928
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 6 CDLFEHC 12
C+LFE C
Sbjct: 692 CNLFEAC 698
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 6 CDLFEHC 12
C+LFE C
Sbjct: 692 CNLFEAC 698
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 6 CDLFEHC 12
C+LFE C
Sbjct: 692 CNLFEAC 698
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 6 CDLFEHC 12
C+LFE C
Sbjct: 692 CNLFEAC 698
>sp|POLS_AURAV|STRUCTURAL polyprotein|Aura virus (AURAV)
Query: 1 SPPAMCDLFEH 11
SPP D +EH
Sbjct: 799 SPPNKADAYEH 809
>sp|VU25_HHV6U|PROTEIN U25|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SPPAMCDLFEHC 12
S +C L EHC
Sbjct: 279 SRDVLCPLREHC 290
>sp|VU25_HHV6Z|PROTEIN U25|Human herpesvirus 6B (strain Z29)
Query: 1 SPPAMCDLFEHC 12
S +C L EHC
Sbjct: 279 SRDVLCPLREHC 290
>sp|VU25_HHV6H|PROTEIN U25|Human herpesvirus 6B (HHV-6 variant
Query: 1 SPPAMCDLFEHC 12
S +C L EHC
Sbjct: 279 SRDVLCPLREHC 290
>sp|E1A_ADECC|EARLY E1A protein|Canine adenovirus serotype 1 (strain
Query: 1 SPPAMCDLFE 10
SPP++ DLF+
Sbjct: 38 SPPSLHDLFD 47
>sp|E1A_ADECR|EARLY E1A protein|Canine adenovirus serotype 1 (strain
Query: 1 SPPAMCDLFE 10
SPP++ DLF+
Sbjct: 38 SPPSLHDLFD 47
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 2 PPAMCDLFE 10
PP MC + E
Sbjct: 84 PPRMCSIIE 92
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 2 PPAMCDLFE 10
PP MC + E
Sbjct: 109 PPRMCSIVE 117
>sp|YR789_MIMIV|PUTATIVE ankyrin repeat protein R789|Acanthamoeba polyphaga mimivirus
Query: 7 DLFEHC 12
D+F+HC
Sbjct: 40 DVFKHC 45
>sp|POLN_AURAV|POLYPROTEIN P1234|Aura virus (AURAV)
Query: 2 PPAMCD 7
PP++CD
Sbjct: 336 PPSICD 341
>sp|E1A_ADECT|EARLY E1A protein|Canine adenovirus serotype 2 (strain
Query: 1 SPPAMCDLFE 10
SPP + DLF+
Sbjct: 38 SPPTLHDLFD 47
>sp|E1A_ADEC2|EARLY E1A protein|Canine adenovirus serotype 2 (CAdV-2)
Query: 1 SPPAMCDLFE 10
SPP + DLF+
Sbjct: 38 SPPTLHDLFD 47
THE END