1|Sequence|1|10|MATGGYRTSS
>sp|VE2_HPV09|REGULATORY protein E2|Human papillomavirus 9
Query: 1 MATGGYRTSS 10
+ TGG RTSS
Sbjct: 232 VPTGGSRTSS 241
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 1 MATGGYRTSS 10
+ G YRTSS
Sbjct: 198 LPPGTYRTSS 207
2|Sequence|6|15|YRTSSGLGGS
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 2 RTSSGLGG 9
R +SGLGG
Sbjct: 1228 RMASGLGG 1235
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 2 RTSSGLGG 9
R +SGLGG
Sbjct: 1228 RLASGLGG 1235
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 4 SSGLGGS 10
SSGLGGS
Sbjct: 2368 SSGLGGS 2374
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 RTSSGLG 8
RTS GLG
Sbjct: 307 RTSIGLG 313
3|Sequence|11|20|GLGGSTTDFL
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 GGSTTDFL 10
GG +TDF+
Sbjct: 1623 GGDSTDFI 1630
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 GGSTTDFL 10
GG +TDF+
Sbjct: 1623 GGDSTDFI 1630
>sp|VP7_ROTH9|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 1 GLGGSTTD 8
G+G STTD
Sbjct: 204 GIGCSTTD 211
>sp|UL22A_HCMVA|GLYCOPROTEIN UL22A|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 GGSTTD 8
GGSTTD
Sbjct: 55 GGSTTD 60
>sp|ICP22_HHV2H|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (strain HG52)
Query: 3 GGSTTD 8
GGST+D
Sbjct: 293 GGSTSD 298
>sp|IR02_HCMVA|UNCHARACTERIZED protein IRL2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GLGGSTT 7
G+GGST+
Sbjct: 6 GVGGSTS 12
>sp|VP7_ROTHL|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 GLGGSTTD 8
G+G +TTD
Sbjct: 204 GIGCTTTD 211
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 5 STTDFL 10
STTDF+
Sbjct: 1278 STTDFI 1283
>sp|VE2_HPV22|REGULATORY protein E2|Human papillomavirus 22
Query: 2 LGGSTTD 8
+GG TTD
Sbjct: 390 VGGHTTD 396
>sp|IORF_CVHOC|PROTEIN I|Human coronavirus OC43 (HCoV-OC43)
Query: 1 GLGGSTTDFL 10
G G TTD L
Sbjct: 79 GTGTDTTDVL 88
>sp|VSGP_TAFVC|PRE-SMALL/SECRETED glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 2 LGGSTTDFL 10
G +TT+FL
Sbjct: 225 FGTNTTEFL 233
>sp|VE2_HPV37|REGULATORY protein E2|Human papillomavirus 37
Query: 2 LGGSTTD 8
+GGST D
Sbjct: 408 VGGSTND 414
>sp|UL22A_HCMVM|GLYCOPROTEIN UL22A|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 GGSTTD 8
GGSTTD
Sbjct: 56 GGSTTD 61
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 4 GSTTDFL 10
G+TT FL
Sbjct: 944 GNTTSFL 950
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 4 GSTTDFL 10
G+TT FL
Sbjct: 944 GNTTSFL 950
>sp|VP7_ROTKU|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 GLGGSTTD 8
G+G TTD
Sbjct: 204 GIGCKTTD 211
>sp|VP7_ROTHH|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 GLGGSTTD 8
G+G TTD
Sbjct: 204 GIGCKTTD 211
>sp|VP7_ROTHD|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 1 GLGGSTTD 8
G+G TTD
Sbjct: 204 GIGCKTTD 211
>sp|VP7_ROTHA|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 1 GLGGSTTD 8
G+G TTD
Sbjct: 204 GIGCKTTD 211
>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 GLGGSTTD 8
G GG T D
Sbjct: 507 GAGGQTQD 514
>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 GLGGSTTD 8
G GG T D
Sbjct: 507 GAGGQTQD 514
>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 GLGGSTTD 8
G GG T D
Sbjct: 507 GAGGQTQD 514
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 GLGGSTTD 8
G GG T D
Sbjct: 507 GAGGQTQD 514
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 GLGGSTTD 8
G GG T D
Sbjct: 507 GAGGQTQD 514
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 GLGGSTTD 8
G GG T D
Sbjct: 507 GAGGQTQD 514
>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)
Query: 3 GGSTTDFL 10
GG TDF+
Sbjct: 108 GGLRTDFV 115
>sp|GE_HHV11|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain 17)
Query: 3 GGSTTDFL 10
GG TDF+
Sbjct: 108 GGLRTDFV 115
4|Sequence|16|25|TTDFLEEWKA
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 TDFLEEWKA 10
T LEEW+A
Sbjct: 976 TATLEEWQA 984
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 5 LEEWKA 10
LEEW+A
Sbjct: 979 LEEWQA 984
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 5 LEEWKA 10
LEEW+A
Sbjct: 979 LEEWQA 984
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 3 DFLEEWKA 10
DF ++WKA
Sbjct: 115 DFEKKWKA 122
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 2 TDFLEEWK 9
T FL EW+
Sbjct: 1544 TTFLAEWE 1551
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 2 TDFLEEWK 9
++ LEEW+
Sbjct: 413 SNILEEWQ 420
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 2 TDFLEEWK 9
++ LEEW+
Sbjct: 412 SNILEEWQ 419
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 2 TDFLEEWK 9
++ LEEW+
Sbjct: 442 SNILEEWQ 449
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 2 TDFLEEWK 9
++ LEEW+
Sbjct: 414 SNILEEWQ 421
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 TDFLEEWKA 10
T +EEW+A
Sbjct: 978 TATMEEWQA 986
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 5 LEEWK 9
LEEWK
Sbjct: 598 LEEWK 602
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 5 LEEWK 9
LEEWK
Sbjct: 598 LEEWK 602
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 TDFLEEWKA 10
T +EEW+A
Sbjct: 978 TATIEEWQA 986
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 TDFLEEWKA 10
T +EEW+A
Sbjct: 978 TATIEEWQA 986
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 TDFLEEWKA 10
T +EEW+A
Sbjct: 978 TATIEEWQA 986
>sp|FUS_PI1HC|FUSION glycoprotein F0|Human parainfluenza 1 virus (strain
Query: 2 TDFLEEWK 9
T+FLEE K
Sbjct: 467 TNFLEESK 474
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 3 DFLEEWKA 10
DF +WKA
Sbjct: 111 DFERKWKA 118
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 TTDFLEEWK 9
T +EEWK
Sbjct: 1096 TNRAMEEWK 1104
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 2 TDFLEEWK 9
T FL EW+
Sbjct: 1544 TTFLAEWE 1551
>sp|RDRP_ROTHC|RNA-DIRECTED RNA polymerase|Rotavirus C (isolate RVC/Human/United
Query: 2 TDFLEEWK 9
TD+L+ W+
Sbjct: 1063 TDYLKLWR 1070
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 4 FLEEW 8
F+EEW
Sbjct: 1560 FVEEW 1564
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 4 FLEEW 8
F+EEW
Sbjct: 1560 FVEEW 1564
>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47
Query: 2 TDFLEEWK 9
+ LEEW+
Sbjct: 410 SSLLEEWQ 417
>sp|NSP4_ROTH7|NON-STRUCTURAL glycoprotein 4|Rotavirus A (isolate RVA/Human/United
Query: 5 LEEWKA 10
LEEWK+
Sbjct: 156 LEEWKS 161
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 3 DFLEEWK 9
+ LEEW+
Sbjct: 415 NILEEWQ 421
>sp|NSP4_ROTH2|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain RVA/Human/United
Query: 5 LEEWKA 10
LEEWK+
Sbjct: 156 LEEWKS 161
>sp|PG187_VAR67|B1 kinase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 LEEWK 9
+EEWK
Sbjct: 66 IEEWK 70
>sp|PG187_VACCC|B1 kinase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 LEEWK 9
+EEWK
Sbjct: 66 IEEWK 70
>sp|PG187_VACCA|B1 kinase|Vaccinia virus (strain Ankara) (VACV)
Query: 5 LEEWK 9
+EEWK
Sbjct: 66 IEEWK 70
>sp|PG187_MONPV|B1 kinase|Monkeypox virus (MPXV)
Query: 5 LEEWK 9
+EEWK
Sbjct: 66 IEEWK 70
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 1 TTDFLEEWKA 10
T+ FLE W +
Sbjct: 1354 TSKFLELWSS 1363
>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 2 TDFLEEWK 9
TDF WK
Sbjct: 340 TDFTPLWK 347
>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8
Query: 2 TDFLEEWK 9
+ LEEW+
Sbjct: 411 SSLLEEWQ 418
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 TDFLEEW 8
TD L++W
Sbjct: 488 TDLLKQW 494
>sp|PG189_VARV|ANKYRIN repeat protein OPG189|Variola virus
Query: 3 DFLEEW 8
DFL W
Sbjct: 51 DFLSRW 56
>sp|PG189_VAR67|ANKYRIN repeat protein OPG189|Variola virus (isolate
Query: 3 DFLEEW 8
DFL W
Sbjct: 51 DFLSRW 56
>sp|PG189_MONPV|ANKYRIN repeat protein OPG189|Monkeypox virus (MPXV)
Query: 3 DFLEEW 8
DFL W
Sbjct: 54 DFLSRW 59
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 TDFLEEWK 9
T LEEW+
Sbjct: 981 TATLEEWQ 988
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 TDFLEEW 8
T+F+E W
Sbjct: 1414 TEFMELW 1420
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 TDFLEEW 8
T+F+E W
Sbjct: 1414 TEFMELW 1420
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 TDFLEEW 8
T+F+E W
Sbjct: 1414 TEFMELW 1420
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 2 TDFLEEWK 9
TDF WK
Sbjct: 340 TDFNSLWK 347
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 2 TDFLEE 7
TDFL+E
Sbjct: 2220 TDFLDE 2225
>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate
Query: 2 TDFLEEW 8
+DF EW
Sbjct: 383 SDFRNEW 389
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 TTDFLEE 7
TT+F+EE
Sbjct: 90 TTEFIEE 96
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 TDFLEEW 8
TDF + W
Sbjct: 463 TDFAQGW 469
5|Sequence|21|30|EEWKAKREKM
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 EEWKAKREKM 10
+ WK+KR M
Sbjct: 2626 QAWKSKRTPM 2635
>sp|NEF_HV1AN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 EEWKAKREKM 10
E W A RE+M
Sbjct: 11 EGWAAVRERM 20
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 EEWKAKREKM 10
+ WK+K+ M
Sbjct: 2626 QAWKSKKTPM 2635
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 EEWKAKREKM 10
+ WK+K+ M
Sbjct: 2626 QAWKSKKTPM 2635
>sp|NEF_HV2KR|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 EEWKAK 6
EEWKAK
Sbjct: 239 EEWKAK 244
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 WKAKREKM 10
WKAK+ M
Sbjct: 2627 WKAKKCPM 2634
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 EEWKAKREKM 10
E+WKA+ +M
Sbjct: 2517 EKWKARLNQM 2526
>sp|NEF_HV1LA|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 WKAKREKM 10
W A RE+M
Sbjct: 13 WPAVRERM 20
>sp|NEF_HV1B8|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 WKAKREKM 10
W A RE+M
Sbjct: 13 WPAVRERM 20
>sp|NEF_HV1S1|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 WKAKREKM 10
W A RE+M
Sbjct: 12 WSAVRERM 19
>sp|NEF_HV1B1|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 WKAKREKM 10
W A RE+M
Sbjct: 13 WPAVRERM 20
>sp|NEF_HV112|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 WKAKREKM 10
W A RE+M
Sbjct: 13 WPAVRERM 20
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 1 EEWKAKREKM 10
++W AKR ++
Sbjct: 633 KDWLAKRREV 642
>sp|NEF_HV1H3|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 WKAKREKM 10
W A RE+M
Sbjct: 13 WPAVRERM 20
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 1 EEWKAKREKM 10
+EW EKM
Sbjct: 569 DEWAVILEKM 578
>sp|NEF_HV1RH|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 WKAKREKM 10
W A RE+M
Sbjct: 13 WPAVRERM 20
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 1 EEWKAKREKM 10
++W AKR ++
Sbjct: 633 KDWLAKRREV 642
>sp|NEF_HV1S3|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 WKAKREKM 10
W A RE+M
Sbjct: 12 WPAVRERM 19
>sp|NEF_HV193|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 WKAKREKM 10
W A RE+M
Sbjct: 13 WPAIRERM 20
>sp|NEF_HV1A2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 WKAKREKM 10
W A RE+M
Sbjct: 13 WSAIRERM 20
>sp|NCAP_PTPV|NUCLEOPROTEIN toro phlebovirus
Query: 1 EEWKAKREKM 10
E+WK +KM
Sbjct: 47 EDWKQDVKKM 56
>sp|NEF_HV2D2|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 EEWKAK 6
EEWKA+
Sbjct: 226 EEWKAR 231
>sp|NEF_HV2RO|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 EEWKAK 6
EEWKA+
Sbjct: 242 EEWKAR 247
>sp|GCVK_HHV6Z|PROBABLE ganciclovir kinase|Human herpesvirus 6B (strain Z29)
Query: 1 EEWKAKREKM 10
++WK + EK+
Sbjct: 120 DKWKLELEKI 129
6|Sequence|26|35|KREKMRAKQN
***** No hits found ******
7|Sequence|31|40|RAKQNPPGPA
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 5 NPPGP 9
NPPGP
Sbjct: 295 NPPGP 299
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 NPPGP 9
NPPGP
Sbjct: 295 NPPGP 299
>sp|VP35_EBORE|POLYMERASE cofactor VP35|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 3 KQNPPGPA 10
KQ PPGPA
Sbjct: 156 KQPPPGPA 163
>sp|VP35_EBORR|POLYMERASE cofactor VP35|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 3 KQNPPGPA 10
KQ PPGPA
Sbjct: 156 KQPPPGPA 163
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 4 QNPPGPA 10
+NPP PA
Sbjct: 1415 KNPPPPA 1421
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 5 NPPGPA 10
+PPGPA
Sbjct: 49 DPPGPA 54
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 5 NPPGPA 10
+PPGPA
Sbjct: 49 DPPGPA 54
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 4 QNPPGPA 10
Q+PP PA
Sbjct: 1429 QSPPPPA 1435
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 QNPPGPA 10
+NPP PA
Sbjct: 1788 RNPPQPA 1794
>sp|ICP22_HHV2H|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (strain HG52)
Query: 1 RAKQNPPGPA 10
RA NPPG A
Sbjct: 202 RAAPNPPGSA 211
>sp|NCAP_EBOZ5|NUCLEOPROTEIN ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 RAKQNPPGP 9
R QN PGP
Sbjct: 525 RPTQNVPGP 533
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 QNPPGPA 10
+NPP PA
Sbjct: 1796 RNPPHPA 1802
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 QNPPGPA 10
+NPP PA
Sbjct: 1796 RNPPHPA 1802
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 KQNPPGP 9
KQN P P
Sbjct: 506 KQNVPDP 512
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 KQNPPGP 9
KQN P P
Sbjct: 506 KQNVPDP 512
>sp|NEF_HV1ZH|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 RAKQNPPGP 9
R +Q PP P
Sbjct: 15 RIRQTPPAP 23
>sp|VP35_EBOSU|POLYMERASE cofactor VP35|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 4 QNPPGPA 10
Q PPGP+
Sbjct: 157 QAPPGPS 163
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 4 QNPPGPA 10
Q PPG A
Sbjct: 568 QGPPGEA 574
>sp|NCAP_EBOZM|NUCLEOPROTEIN ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 RAKQNPPGP 9
R QN PGP
Sbjct: 525 RPIQNVPGP 533
>sp|TEG7_HHV2H|TEGUMENT protein UL51|Human herpesvirus 2 (strain HG52)
Query: 2 AKQNPPGP 9
A + PPGP
Sbjct: 180 ATEAPPGP 187
8|Sequence|36|45|PPGPAPPGGG
>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23
Query: 2 PGPAPPGG 9
PGPA GG
Sbjct: 142 PGPAAQGG 149
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GPAPPG 8
GPAPPG
Sbjct: 217 GPAPPG 222
>sp|GO_HHV6U|120 kDa Glycoprotein O|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PGPAPP 7
P PAPP
Sbjct: 292 PTPAPP 297
>sp|UL16P_HCMVM|PROTEIN UL16|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PAPPGGG 10
P PPG G
Sbjct: 163 PRPPGSG 169
>sp|UL16P_HCMVA|PROTEIN UL16|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PAPPGGG 10
P PPG G
Sbjct: 163 PRPPGSG 169
>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)
Query: 2 PGPAPPGGG 10
P APPGG
Sbjct: 66 PPTAPPGGA 74
>sp|HBZ_HTL1C|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1
Query: 1 PPGPAPPGG 9
P G APP G
Sbjct: 66 PGGKAPPRG 74
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 PPGPAPPG 8
P GP PPG
Sbjct: 221 PVGPLPPG 228
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 PPGPAPP 7
PPG PP
Sbjct: 476 PPGAKPP 482
>sp|PHOSP_VSNJM|PHOSPHOPROTEIN stomatitis New Jersey virus
Query: 2 PGPAP 6
PGPAP
Sbjct: 194 PGPAP 198
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 PPGPAPP 7
PPG PP
Sbjct: 475 PPGAKPP 481
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 PPGPAPP 7
PPG PP
Sbjct: 476 PPGAQPP 482
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 1 PPGPAP 6
PPGP P
Sbjct: 296 PPGPDP 301
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PPGPAP 6
PPGP P
Sbjct: 296 PPGPDP 301
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 PPGPAPP 7
PPG PP
Sbjct: 476 PPGAQPP 482
>sp|E1B55_ADE07|E1B 55 kDa protein|Human adenovirus B serotype 7
Query: 4 PAPPGGG 10
P P GGG
Sbjct: 70 PGPSGGG 76
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 PPGPAPP 7
PPG PP
Sbjct: 466 PPGANPP 472
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 5 APPGGG 10
APP GG
Sbjct: 775 APPSGG 780
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 PPGPAPP 7
PPG PP
Sbjct: 477 PPGADPP 483
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 PPGPAPP 7
PPG PP
Sbjct: 477 PPGADPP 483
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 PPGPAPP 7
PPG PP
Sbjct: 466 PPGADPP 472
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 1 PPGPAPP 7
PPG PP
Sbjct: 183 PPGSCPP 189
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 PPGPAP 6
PP PAP
Sbjct: 1790 PPQPAP 1795
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GPAPPG 8
GP PPG
Sbjct: 221 GPIPPG 226
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 PPGPAP 6
PP PAP
Sbjct: 1798 PPHPAP 1803
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 1 PPGPAPP 7
PPG PP
Sbjct: 183 PPGSCPP 189
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 PPGPAP 6
PP PAP
Sbjct: 1798 PPHPAP 1803
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GPAPPG 8
GP PPG
Sbjct: 217 GPIPPG 222
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GPAPPG 8
GP PPG
Sbjct: 217 GPIPPG 222
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GPAPPG 8
GP PPG
Sbjct: 227 GPIPPG 232
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GPAPPG 8
GP PPG
Sbjct: 221 GPIPPG 226
>sp|SCAF_HHV11|CAPSID scaffolding protein|Human herpesvirus 1 (strain 17)
Query: 2 PGPAPPGGG 10
P PAPPG G
Sbjct: 316 PAPAPPGDG 324
>sp|VPX_HV2KR|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 1 PPGPAPPGGG 10
P PPG G
Sbjct: 4 PRKTVPPGNG 13
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 GPAPP 7
GP PP
Sbjct: 825 GPGPP 829
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 GPAPP 7
GP PP
Sbjct: 825 GPGPP 829
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 GPAPP 7
GP PP
Sbjct: 824 GPGPP 828
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GPAPPG 8
GP PPG
Sbjct: 217 GPIPPG 222
>sp|SHUT_HHV2H|VIRION host shutoff protein|Human herpesvirus 2 (strain HG52)
Query: 2 PGPAPPGGG 10
PGPA P G
Sbjct: 155 PGPAAPSGA 163
>sp|SHUT_HHV2G|VIRION host shutoff protein|Human herpesvirus 2 (strain G)
Query: 2 PGPAPPGGG 10
PGPA P G
Sbjct: 155 PGPAAPSGA 163
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GPAPPG 8
GP PPG
Sbjct: 217 GPIPPG 222
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 6 PPGGG 10
PPGGG
Sbjct: 460 PPGGG 464
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 GPAPP 7
GP PP
Sbjct: 1949 GPVPP 1953
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GPAPPG 8
GP PPG
Sbjct: 223 GPIPPG 228
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GPAPPG 8
GP PPG
Sbjct: 217 GPIPPG 222
>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New
Query: 2 PGPAPPGGG 10
PGP P G
Sbjct: 226 PGPRPQMNG 234
>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956
Query: 2 PGPAPPGGG 10
PGP P G
Sbjct: 226 PGPRPQMNG 234
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 PPGPAPPG 8
PPG PG
Sbjct: 466 PPGAGVPG 473
Query: 1 PPGPAPPG 8
P GP P G
Sbjct: 718 PGGPIPKG 725
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 PP--GPAPPG 8
PP GP PPG
Sbjct: 215 PPAMGPLPPG 224
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 5 APPGGG 10
APPG G
Sbjct: 466 APPGAG 471
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PPGPAPPGGG 10
P PPG G
Sbjct: 603 PARDPPPGAG 612
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PGPAPPG 8
PGP P G
Sbjct: 216 PGPMPAG 222
Query: 5 APPGGG 10
APP GG
Sbjct: 123 APPSGG 128
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PPGPAPPGGG 10
P PPG G
Sbjct: 603 PARDPPPGAG 612
>sp|CAPSD_HASV3|CAPSID polyprotein VP90|Human astrovirus-3 (HAstV-3)
Query: 3 GPAPPG 8
PAPPG
Sbjct: 599 APAPPG 604
>sp|CAP3_ADE05|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 5
Query: 2 PGPAPP 7
PGP PP
Sbjct: 534 PGPRPP 539
>sp|CAP3_ADE02|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 2
Query: 2 PGPAPP 7
PGP PP
Sbjct: 534 PGPRPP 539
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PPGPAPPGGG 10
P PPG G
Sbjct: 603 PARDPPPGAG 612
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GPAPPG 8
GP PPG
Sbjct: 221 GPFPPG 226
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PGPAPPG 8
PGP P G
Sbjct: 216 PGPMPAG 222
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 2 PGPAPPGG 9
P APPGG
Sbjct: 25 PEVAPPGG 32
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GPAPPG 8
GP PPG
Sbjct: 220 GPIPPG 225
>sp|US17_HCMVM|PROTEIN US17|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PPGPAPPGG 9
PP P P G
Sbjct: 14 PPPPRPSRG 22
>sp|US17_HCMVA|UNCHARACTERIZED protein HVLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PPGPAPPGG 9
PP P P G
Sbjct: 14 PPPPRPSRG 22
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 3 GPAPPGGG 10
GP PP G
Sbjct: 881 GPLPPSNG 888
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 3 GPAPPGGG 10
GP PP G
Sbjct: 881 GPLPPSNG 888
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PPGPAPPGG 9
P GP+P G
Sbjct: 444 PRGPSPAGA 452
Query: 2 PGPAPPG 8
PGP P G
Sbjct: 219 PGPLPAG 225
>sp|UL34_HCMVM|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PAPPGG 9
P PPGG
Sbjct: 52 PVPPGG 57
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PGPAPPG 8
PGP P G
Sbjct: 221 PGPLPAG 227
>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao
Query: 2 PGPAPPGGG 10
PGP P G
Sbjct: 226 PGPRPQING 234
>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973
Query: 2 PGPAPPGGG 10
PGP P G
Sbjct: 226 PGPRPQING 234
>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973
Query: 2 PGPAPPGGG 10
PGP P G
Sbjct: 226 PGPRPQING 234
>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972
Query: 2 PGPAPPGGG 10
PGP P G
Sbjct: 226 PGPRPQING 234
>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966
Query: 2 PGPAPPGGG 10
PGP P G
Sbjct: 226 PGPRPQING 234
>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964
Query: 2 PGPAPPGGG 10
PGP P G
Sbjct: 226 PGPRPQING 234
>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964
Query: 2 PGPAPPGGG 10
PGP P G
Sbjct: 226 PGPRPQING 234
>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963
Query: 2 PGPAPPGGG 10
PGP P G
Sbjct: 226 PGPRPQING 234
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PGPAPPG 8
PGP P G
Sbjct: 221 PGPLPAG 227
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PGPAPPG 8
PGP P G
Sbjct: 221 PGPLPAG 227
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 2 PGPAPPGG 9
P PAP GG
Sbjct: 572 PLPAPGGG 579
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PGPAPPG 8
PGP P G
Sbjct: 222 PGPLPAG 228
>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)
Query: 2 PGPAPPGGG 10
PGPA P G
Sbjct: 155 PGPAAPWGA 163
>sp|UL34_HCMVT|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 4 PAPPGG 9
P PPGG
Sbjct: 52 PVPPGG 57
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PGPAPPG 8
PGP P G
Sbjct: 216 PGPLPAG 222
Query: 5 APPGGG 10
APP GG
Sbjct: 123 APPSGG 128
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PGPAPPG 8
PGP P G
Sbjct: 221 PGPLPAG 227
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PGPAPPG 8
PGP P G
Sbjct: 221 PGPLPAG 227
>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)
Query: 4 PAPPG 8
PAPPG
Sbjct: 599 PAPPG 603
>sp|UL34_HCMVA|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PAPPGG 9
P PPGG
Sbjct: 52 PVPPGG 57
>sp|GAG_HV1MA|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 GPAPPG 8
GP PPG
Sbjct: 227 GPIPPG 232
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 PPGPAPPG 8
PPG PG
Sbjct: 739 PPGAPIPG 746
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 PPGPAPPG 8
PPG PG
Sbjct: 739 PPGAPIPG 746
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PGPAPPG 8
PGP P G
Sbjct: 221 PGPLPAG 227
>sp|GAG_HV197|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 GPAPPG 8
GP PPG
Sbjct: 217 GPIPPG 222
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 3 GPAPPG 8
GPA PG
Sbjct: 957 GPAEPG 962
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PGPAPPG 8
PGP P G
Sbjct: 221 PGPLPAG 227
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 3 GPAPPG 8
GPA PG
Sbjct: 958 GPAEPG 963
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 5 APPGGG 10
+PPG G
Sbjct: 465 SPPGAG 470
>sp|GAG_HV1VI|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 GPAPPG 8
GPAPPG
Sbjct: 217 GPAPPG 222
>sp|VL1_HPV51|MAJOR capsid protein L1|Human papillomavirus 51
Query: 1 PPGPAPP 7
PPG PP
Sbjct: 180 PPGDCPP 186
>sp|GAG_HV190|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 GPAPPG 8
GP PPG
Sbjct: 221 GPIPPG 226
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 5 APPGGG 10
+PPG G
Sbjct: 465 SPPGAG 470
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 2 PGPAPP 7
P P PP
Sbjct: 1763 PAPIPP 1768
>sp|VGP_MABVO|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 PPGPAPPGG 9
PP P+P G
Sbjct: 295 PPTPSPQPG 303
>sp|TAX_HTL3P|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 3 GPAPPGGG 10
GP PP GG
Sbjct: 336 GPQPPTGG 343
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 3 GPAPPGG 9
GPA PGG
Sbjct: 7 GPASPGG 13
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 3 GPAPPGG 9
GPA PGG
Sbjct: 7 GPASPGG 13
>sp|GAG_HV1MV|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 GPAPPG 8
GP PPG
Sbjct: 219 GPLPPG 224
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 2 PGPAPP 7
P P PP
Sbjct: 1766 PAPIPP 1771
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 3 GPAPPGGG 10
GP PP G
Sbjct: 882 GPLPPSQG 889
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 5 APPGGG 10
+PPG G
Sbjct: 465 SPPGAG 470
9|Sequence|41|50|PPGGGSSDAA
>sp|PAP1_ORFN2|POLY(A) polymerase catalytic subunit|Orf virus (strain NZ2) (OV
Query: 1 PPGGGSS 7
PP GG+S
Sbjct: 326 PPEGGAS 332
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 2 PGGGS 6
PGGGS
Sbjct: 102 PGGGS 106
>sp|VE2_HPV38|REGULATORY protein E2|Human papillomavirus 38
Query: 1 PPGGGSSDAA 10
PP G S+D+A
Sbjct: 203 PPVGDSTDSA 212
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 PGGGSSDAA 10
PG SSDA+
Sbjct: 826 PGPPSSDAS 834
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PGGGSSDAA 10
PG SSDA+
Sbjct: 826 PGPPSSDAS 834
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PGGGSSDAA 10
PG SSDA+
Sbjct: 825 PGPPSSDAS 833
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PPGGGSS 7
P GGG+S
Sbjct: 176 PGGGGAS 182
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PPGGGSS 7
P GGG+S
Sbjct: 176 PGGGGAS 182
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 1 PPGGGS 6
PP GG+
Sbjct: 776 PPSGGA 781
>sp|US22_HCMVM|TEGUMENT protein US22|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PGGGSSD 8
PGG SSD
Sbjct: 472 PGGDSSD 478
>sp|US22_HCMVA|EARLY nuclear protein HWLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PGGGSSD 8
PGG SSD
Sbjct: 472 PGGDSSD 478
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 PPGGGSSD 8
PP GG +
Sbjct: 373 PPAGGDPE 380
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 4 GGSSDAA 10
GG SDA+
Sbjct: 680 GGESDAS 686
>sp|HEMA_I84A5|HEMAGGLUTININ A virus (strain A/Swine/Ukkel/1/1984
Query: 2 PGGGSSDA 9
PG G+S A
Sbjct: 20 PGNGNSTA 27
>sp|VE2_HPV63|REGULATORY protein E2|Human papillomavirus type 63
Query: 1 PPGGGSS 7
PP GG S
Sbjct: 297 PPKGGQS 303
>sp|NCAP_PI1HW|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 1 PPGGGSSDAA 10
P GGG+ + A
Sbjct: 411 PTGGGAIEVA 420
>sp|NCAP_PI1HA|NUCLEOPROTEIN parainfluenza 1 virus (strains
Query: 1 PPGGGSSDAA 10
P GGG+ + A
Sbjct: 411 PTGGGAIEVA 420
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 3 GGGSSDAA 10
GG SSD A
Sbjct: 168 GGDSSDNA 175
>sp|NCAP_PI1HC|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 1 PPGGGSSDAA 10
P GGG+ + A
Sbjct: 411 PTGGGAIEVA 420
10|Sequence|46|55|SSDAAGKPPA
>sp|NS1_I05A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 1 SSDAAGKPP 9
SSD G+PP
Sbjct: 196 SSDKNGRPP 204
>sp|NS1_I00A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Duck/Hong
Query: 1 SSDAAGKPP 9
SSD G+PP
Sbjct: 200 SSDEDGRPP 208
>sp|NS1_I01A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Silky
Query: 1 SSDAAGKPP 9
SSD G+PP
Sbjct: 200 SSDEDGRPP 208
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 SSDAAGKPPA 10
S+ A+G+PPA
Sbjct: 57 STTASGRPPA 66
>sp|NS1_I01A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 SSDAAGKPP 9
SSD G+PP
Sbjct: 200 SSDEDGRPP 208
>sp|NS1_I01A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 SSDAAGKPP 9
SSD G+PP
Sbjct: 200 SSDEDGRPP 208
>sp|NS1_I01A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 SSDAAGKPP 9
SSD G+PP
Sbjct: 200 SSDEDGRPP 208
>sp|NS1_I60A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Ann
Query: 1 SSDAAGKPP 9
SSD G+PP
Sbjct: 205 SSDENGRPP 213
>sp|NS1_I02A7|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 1 SSDAAGKPP 9
SSD G+PP
Sbjct: 183 SSDENGRPP 191
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 DAAGKP 8
DA+GKP
Sbjct: 2924 DASGKP 2929
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 DAAGKP 8
DA+GKP
Sbjct: 2924 DASGKP 2929
>sp|NS1_I02A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Silky
Query: 1 SSDAAGKP 8
SSD G+P
Sbjct: 205 SSDEGGRP 212
>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)
Query: 5 AGKPPA 10
AG+PPA
Sbjct: 513 AGQPPA 518
>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 AGKPPA 10
AG+PPA
Sbjct: 513 AGQPPA 518
11|Sequence|51|60|GKPPAGALGT
>sp|X_HBVD3|PROTEIN X|Hepatitis B virus genotype D
Query: 1 GKPPAGALGT 10
G+P +G+LGT
Sbjct: 27 GRPFSGSLGT 36
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 1 GKPPAGALGT 10
G+P GAL T
Sbjct: 122 GQPFGGALST 131
>sp|PKG1_ADE40|PACKAGING protein 1|Human adenovirus F serotype 40
Query: 1 GKPPAGAL 8
G+PP G +
Sbjct: 54 GRPPTGTV 61
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 KPPAGA 7
+PPAGA
Sbjct: 2894 EPPAGA 2899
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 KPPAGA 7
+PPAGA
Sbjct: 2874 EPPAGA 2879
>sp|X_HBVA8|PROTEIN X|Hepatitis B virus genotype A3
Query: 1 GKPPAGALGT 10
G+P +G LGT
Sbjct: 27 GRPFSGPLGT 36
>sp|X_HBVD2|PROTEIN X|Hepatitis B virus genotype D
Query: 1 GKPPAGALGT 10
G+P +G LGT
Sbjct: 27 GRPFSGPLGT 36
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 PPAGALG 9
PPAGA G
Sbjct: 1826 PPAGATG 1832
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 PPAGALG 9
PPAGA G
Sbjct: 1826 PPAGATG 1832
>sp|X_HBVA7|PROTEIN X|Hepatitis B virus genotype A2
Query: 1 GKPPAGALGT 10
G+P +G LGT
Sbjct: 27 GRPLSGPLGT 36
>sp|X_HBVA4|PROTEIN X|Hepatitis B virus genotype A2
Query: 1 GKPPAGALGT 10
G+P +G LGT
Sbjct: 27 GRPLSGPLGT 36
>sp|X_HBVA3|PROTEIN X|Hepatitis B virus genotype A2
Query: 1 GKPPAGALGT 10
G+P +G LGT
Sbjct: 27 GRPLSGPLGT 36
>sp|X_HBVA2|PROTEIN X|Hepatitis B virus genotype A2
Query: 1 GKPPAGALGT 10
G+P +G LGT
Sbjct: 27 GRPLSGPLGT 36
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 PPAGALG 9
PPAGA G
Sbjct: 1826 PPAGATG 1832
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 3 PPAGALG 9
PPAGA G
Sbjct: 1826 PPAGATG 1832
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 PPAGALG 9
PPAGA G
Sbjct: 1826 PPAGATG 1832
>sp|X_HBVD6|PROTEIN X|Hepatitis B virus genotype D
Query: 1 GKPPAGALGT 10
G+P +G LGT
Sbjct: 27 GRPFSGPLGT 36
>sp|X_HBVC7|PROTEIN X|Hepatitis B virus genotype C
Query: 1 GKPPAGALGT 10
G+P +G LGT
Sbjct: 27 GRPFSGPLGT 36
>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 3 PPAGAL 8
PPAG+L
Sbjct: 469 PPAGSL 474
>sp|X_HBVE4|PROTEIN X|Hepatitis B virus genotype E
Query: 1 GKPPAGALG 9
G+P +G+LG
Sbjct: 27 GRPVSGSLG 35
>sp|X_HBVC0|PROTEIN X|Hepatitis B virus genotype C
Query: 1 GKPPAGALG 9
G+P +G+LG
Sbjct: 27 GRPVSGSLG 35
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 KPPAGA 7
+PPAGA
Sbjct: 544 RPPAGA 549
>sp|X_HBVE3|PROTEIN X|Hepatitis B virus genotype E
Query: 1 GKPPAGALG 9
G+P +G+LG
Sbjct: 27 GRPVSGSLG 35
>sp|X_HBVE1|PROTEIN X|Hepatitis B virus genotype E
Query: 1 GKPPAGALG 9
G+P +G+LG
Sbjct: 27 GRPVSGSLG 35
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 1 GKPPAGAL 8
G PPA AL
Sbjct: 58 GVPPASAL 65
12|Sequence|56|65|GALGTPAAAA
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 GALGTPAAA 9
GAL TP AA
Sbjct: 2428 GALVTPCAA 2436
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 GALGTPAAA 9
GAL TP AA
Sbjct: 2432 GALVTPCAA 2440
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 GALGTPAAA 9
GAL TP AA
Sbjct: 2425 GALVTPCAA 2433
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 GALGTPAAA 9
GAL TP AA
Sbjct: 2433 GALVTPCAA 2441
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 GALGTPAAA 9
GAL TP AA
Sbjct: 2428 GALVTPCAA 2436
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 GALGTPAAA 9
GAL TP AA
Sbjct: 2436 GALITPCAA 2444
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 GALGTPAAA 9
GAL TP AA
Sbjct: 2428 GALITPCAA 2436
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 GALGTPAAA 9
GAL TP AA
Sbjct: 2435 GALITPCAA 2443
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GALGTPAAA 9
GAL TP AA
Sbjct: 2427 GALITPCAA 2435
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GALGTPAAA 9
GAL TP AA
Sbjct: 2428 GALITPCAA 2436
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GALGTPAAA 9
GAL TP AA
Sbjct: 2427 GALITPCAA 2435
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GALGTPAAA 9
GAL TP AA
Sbjct: 2427 GALITPCAA 2435
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 GALGTPAAA 9
GAL TP AA
Sbjct: 2436 GALITPCAA 2444
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GALGTPAAA 9
GAL TP AA
Sbjct: 2427 GALITPCAA 2435
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GALGTPAAA 9
GAL TP AA
Sbjct: 2427 GALITPCAA 2435
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GALGTPAAA 9
GAL TP AA
Sbjct: 2427 GALITPCAA 2435
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GALGTPAAA 9
GAL TP AA
Sbjct: 2427 GALITPCAA 2435
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 GALGTPAAA 9
GAL TP AA
Sbjct: 2430 GALITPCAA 2438
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 GALGTPAAA 9
GAL TP AA
Sbjct: 2439 GALITPCAA 2447
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 GALGTPAAA 9
GAL TP AA
Sbjct: 2436 GALITPCAA 2444
13|Sequence|61|70|PAAAAANELN
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 5 AANELN 10
AANELN
Sbjct: 793 AANELN 798
>sp|VP2_ROTHC|INNER capsid protein VP2|Rotavirus C (isolate RVC/Human/United
Query: 2 AAAAANE 8
+AAAANE
Sbjct: 375 SAAAANE 381
>sp|VE2_HPV52|REGULATORY protein E2|Human papillomavirus 52
Query: 1 PAAAAANELN 10
PA+ ++NE++
Sbjct: 196 PASVSSNEVS 205
14|Sequence|66|75|ANELNNNLPG
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 ANELNNNLPG 10
A +LN +LPG
Sbjct: 1263 ATDLNFSLPG 1272
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 1 ANELNNNLP 9
A++ NNN+P
Sbjct: 821 ASKCNNNVP 829
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 ELNNNLPG 10
E NN+PG
Sbjct: 606 EDKNNVPG 613
>sp|PG147_VARV|VIRION membrane protein OPG147|Variola virus
Query: 2 NELNNN 7
NE+NNN
Sbjct: 79 NEVNNN 84
>sp|PG147_VAR67|VIRION membrane protein OPG147|Variola virus (isolate
Query: 2 NELNNN 7
NE+NNN
Sbjct: 79 NEVNNN 84
>sp|PG147_VACCC|VIRION membrane protein OPG147|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 NELNNN 7
NE+NNN
Sbjct: 79 NEVNNN 84
>sp|A21_VACCA|VIRION membrane protein A21|Vaccinia virus (strain Ankara) (VACV)
Query: 2 NELNNN 7
NE+NNN
Sbjct: 79 NEVNNN 84
>sp|NSP1_ROTHJ|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/K8/1977/G1P3A[9])
Query: 2 NELNNN 7
N+LNNN
Sbjct: 15 NKLNNN 20
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 ANELNNN 7
ANE N+N
Sbjct: 431 ANETNSN 437
15|Sequence|71|80|NNLPGGAPAA
>sp|F13_MCV1|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 1
Query: 3 LPGGAPAA 10
LPGG P +
Sbjct: 112 LPGGKPGS 119
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 4 PGGAPAA 10
PGGAP+A
Sbjct: 634 PGGAPSA 640
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 4 PGGAPAA 10
PGGAP+A
Sbjct: 634 PGGAPSA 640
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 4 PGGAPAA 10
PGG PAA
Sbjct: 11 PGGKPAA 17
>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 3 LPGGAP 8
LPGG P
Sbjct: 270 LPGGPP 275
>sp|F13_MCV2|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 2
Query: 3 LPGGAPAA 10
LPGG P +
Sbjct: 112 LPGGKPGS 119
>sp|PAP_HHV2H|DNA polymerase processivity factor|Human herpesvirus 2 (strain HG52)
Query: 2 NLPGGAPAA 10
+LPGGA AA
Sbjct: 3 HLPGGAAAA 11
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 2 NLPGGAPAA 10
N+ GGAP+A
Sbjct: 240 NIAGGAPSA 248
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 2 NLPGGAPAA 10
N+ GGAP+A
Sbjct: 237 NIAGGAPSA 245
>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73
Query: 4 PGGAP 8
PGG+P
Sbjct: 91 PGGSP 95
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 NNLPGGAPAA 10
NN+ GG P +
Sbjct: 2574 NNIVGGHPVS 2583
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 NNLPGGAPAA 10
NN+ GG P +
Sbjct: 2574 NNIVGGHPVS 2583
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 NNLPGGAPAA 10
NN+ GG P +
Sbjct: 2574 NNIVGGHPVS 2583
>sp|VE2_HPV53|REGULATORY protein E2|Human papillomavirus type 53
Query: 2 NLPGGA 7
+LPGGA
Sbjct: 283 HLPGGA 288
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 NNLPGGAPAA 10
NN+ GG P +
Sbjct: 2574 NNIVGGHPVS 2583
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 2 NLPGG 6
N+PGG
Sbjct: 264 NIPGG 268
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 2 NLPGG 6
N+PGG
Sbjct: 256 NIPGG 260
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 2 NLPGG 6
N+PGG
Sbjct: 256 NIPGG 260
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 2 NLPGG 6
N+PGG
Sbjct: 256 NIPGG 260
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 NNLPGGA 7
+LPGGA
Sbjct: 693 RDLPGGA 699
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 NNLPGGA 7
+LPGGA
Sbjct: 693 RDLPGGA 699
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 NNLPGGA 7
+LPGGA
Sbjct: 693 RDLPGGA 699
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 NNLPGGA 7
+LPGGA
Sbjct: 693 RDLPGGA 699
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 NNLPGGA 7
+LPGGA
Sbjct: 693 RDLPGGA 699
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 NNLPGGA 7
+LPGGA
Sbjct: 693 RDLPGGA 699
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 3 LPGGAPA 9
+P GAPA
Sbjct: 530 VPPGAPA 536
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 NNLPGGA 7
+LPGGA
Sbjct: 693 RDLPGGA 699
>sp|NEF_HV2CA|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 2 NLPGGAPAA 10
N P APAA
Sbjct: 67 NTPWRAPAA 75
16|Sequence|76|85|GAPAAPAVPG
>sp|NRAM_I80A2|NEURAMINIDASE A virus (strain A/Seal/Massachusetts/1/1980
Query: 1 GAPAAPAVPG 10
G+P AP V G
Sbjct: 341 GSPGAPGVKG 350
>sp|NRAM_I74A1|NEURAMINIDASE A virus (strain A/Equine/Cor/16/1974
Query: 1 GAPAAPAVPG 10
G+P AP + G
Sbjct: 340 GSPGAPGIKG 349
>sp|SF33K_ADE40|PROTEIN 33K|Human adenovirus F serotype 40
Query: 1 GAPAAPAVP 9
G+P APA P
Sbjct: 108 GSPTAPAAP 116
>sp|NRAM_I000F|NEURAMINIDASE A virus (strain A/Chicken/Weybridge
Query: 1 GAPAAPAVPG 10
G+P AP V G
Sbjct: 342 GSPGAPGVKG 351
>sp|NRAM_I56A3|NEURAMINIDASE A virus (strain A/Equine/Prague/1/1956
Query: 1 GAPAAPAVPG 10
G+P AP + G
Sbjct: 340 GSPGAPGIKG 349
>sp|NRAM_I85A3|NEURAMINIDASE A virus (strain A/Chicken/Victoria/1/1985
Query: 1 GAPAAPAVPG 10
G+P AP V G
Sbjct: 342 GSPGAPGVKG 351
>sp|NEF_HV2CA|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 GAPAAPAVP 9
G PA P VP
Sbjct: 99 GVPATPRVP 107
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 1 GAPAAPAVPG 10
AP++P PG
Sbjct: 29 AAPSSPGTPG 38
Query: 2 APAAPAVPG 10
A AAP+ PG
Sbjct: 27 ASAAPSSPG 35
>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)
Query: 1 GAPAAPAVPG 10
AP++P PG
Sbjct: 30 AAPSSPGTPG 39
Query: 2 APAAPAVPG 10
A AAP+ PG
Sbjct: 28 ASAAPSSPG 36
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 1 GAPAAPAVPG 10
AP++P PG
Sbjct: 30 AAPSSPGTPG 39
Query: 2 APAAPAVPG 10
A AAP+ PG
Sbjct: 28 ASAAPSSPG 36
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 1 GAPAAPAVPG 10
AP +P PG
Sbjct: 30 AAPTSPGTPG 39
Query: 2 APAAPAVPG 10
A AAP PG
Sbjct: 28 ASAAPTSPG 36
>sp|GAG_FOAMV|GAG polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 GAPAAPAVPG 10
G P+ P++PG
Sbjct: 202 GLPSLPSIPG 211
>sp|GD_HHV2H|ENVELOPE glycoprotein D|Human herpesvirus 2 (strain HG52)
Query: 2 APAAPAVPG 10
APAAP+ PG
Sbjct: 332 APAAPSNPG 340
>sp|GD_HHV23|ENVELOPE glycoprotein D|Human herpesvirus 2 (strain 333)
Query: 2 APAAPAVPG 10
APAAP+ PG
Sbjct: 332 APAAPSNPG 340
>sp|VE2_HPV55|REGULATORY protein E2|Human papillomavirus type 55
Query: 2 APAAPAVP 9
A A+PA+P
Sbjct: 224 AQASPALP 231
>sp|IR09_HCMVA|UNCHARACTERIZED protein IRL9|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GAPAAPAVPG 10
G APA+PG
Sbjct: 57 GERRAPAIPG 66
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 2 APAAPAV 8
AP APA+
Sbjct: 12 APTAPAI 18
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 1 GAPAAPAVP 9
G P +P+VP
Sbjct: 1042 GTPCSPSVP 1050
>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)
Query: 1 GAPAAPAVP 9
G+ A P VP
Sbjct: 401 GSVAVPGVP 409
>sp|NEF_HV1AN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GAPAAPAVP 9
G P AP VP
Sbjct: 73 GFPVAPQVP 81
>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)
Query: 1 GAPAAPAVP 9
G+ A P VP
Sbjct: 401 GSVAVPGVP 409
>sp|VE2_HPV41|REGULATORY protein E2|Human papillomavirus type 41
Query: 1 GAPAAPA 7
G P APA
Sbjct: 234 GEPVAPA 240
>sp|NCAP_CVHOC|NUCLEOPROTEIN coronavirus OC43 (HCoV-OC43)
Query: 1 GAPAAPAVPG 10
G P AP VP
Sbjct: 85 GPPIAPGVPA 94
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 GAPAAPAVPG 10
GAP +PA P
Sbjct: 1169 GAPISPASPS 1178
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 GAPAAPAVPG 10
GAP +PA P
Sbjct: 1142 GAPISPASPS 1151
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 GAPAAPAVPG 10
GAP +PA P
Sbjct: 1147 GAPISPASPS 1156
17|Sequence|81|90|PAVPGPGGVN
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 3 VPGPGG 8
VPGPGG
Sbjct: 145 VPGPGG 150
>sp|NSS_TOSV|NON-STRUCTURAL protein NS-S|Toscana virus (Tos)
Query: 1 PAVPGPGGVN 10
PAV GPG ++
Sbjct: 72 PAVLGPGMIS 81
>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5
Query: 4 PGPGGVN 10
PGP G+N
Sbjct: 70 PGPSGMN 76
>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2
Query: 4 PGPGGVN 10
PGP G+N
Sbjct: 69 PGPSGMN 75
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 4 PGPGGV 9
PGPGG+
Sbjct: 3083 PGPGGL 3088
>sp|U10_HHV6Z|PROTEIN U10|Human herpesvirus 6B (strain Z29)
Query: 2 AVPGPGGVN 10
A PGPG V+
Sbjct: 489 ATPGPGTVS 497
>sp|U10_HHV6H|PROTEIN U10|Human herpesvirus 6B (HHV-6 variant
Query: 2 AVPGPGGVN 10
A PGPG V+
Sbjct: 489 ATPGPGTVS 497
>sp|SHDAG_HDVV2|SMALL delta antigen|Hepatitis delta virus genotype III
Query: 2 AVPGPGGVN 10
A P PGGVN
Sbjct: 144 AGPRPGGVN 152
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 AVPGPG 7
AVPGPG
Sbjct: 243 AVPGPG 248
>sp|P100_HHV6Z|LARGE structural phosphoprotein|Human herpesvirus 6B (strain Z29)
Query: 3 VPGPG 7
VPGPG
Sbjct: 837 VPGPG 841
>sp|P100_HHV6H|LARGE structural phosphoprotein|Human herpesvirus 6B (HHV-6 variant
Query: 3 VPGPG 7
VPGPG
Sbjct: 837 VPGPG 841
>sp|NS1_INBRU|NON-STRUCTURAL protein 1|Influenza B virus (strain B/RU/1969)
Query: 5 GPGGVN 10
GPGG N
Sbjct: 13 GPGGTN 18
>sp|SHDAG_HDVP1|SMALL delta antigen|Hepatitis delta virus genotype III
Query: 2 AVPGPGGVN 10
A P PGGVN
Sbjct: 144 AGPRPGGVN 152
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 1 PAVPG 5
PAVPG
Sbjct: 27 PAVPG 31
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 PAVPGPGG 8
PA+P P G
Sbjct: 587 PALPAPTG 594
>sp|RL11_HCMVM|MEMBRANE glycoprotein RL11|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PGPGGV 9
PGPG V
Sbjct: 153 PGPGRV 158
>sp|IR11_HCMVA|VIRAL Fc-gamma receptor-like protein IR11|Human cytomegalovirus (strain
Query: 4 PGPGGV 9
PGPG V
Sbjct: 153 PGPGRV 158
>sp|LHDAG_HDVV2|LARGE delta antigen|Hepatitis delta virus genotype III
Query: 2 AVPGPGGVN 10
A P PGGVN
Sbjct: 144 AGPRPGGVN 152
>sp|SHDAG_HDVV3|SMALL delta antigen|Hepatitis delta virus genotype III
Query: 2 AVPGPGGVN 10
A P PGGVN
Sbjct: 144 AGPRPGGVN 152
>sp|SHDAG_HDVV1|SMALL delta antigen|Hepatitis delta virus genotype III
Query: 2 AVPGPGGVN 10
A P PGGVN
Sbjct: 144 AGPRPGGVN 152
>sp|ICP34_HHV2H|NEUROVIRULENCE factor ICP34.5|Human herpesvirus 2 (strain HG52)
Query: 1 PAVPGPGGV 9
PAVP PG +
Sbjct: 29 PAVPRPGAL 37
Query: 1 PAVPGPGG 8
PAVP PG
Sbjct: 21 PAVPRPGA 28
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 PAVPGPGGV 9
P+VP P G+
Sbjct: 758 PSVPEPAGL 766
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 PAVPGPGGVN 10
P PG G+N
Sbjct: 299 PLRPGSSGIN 308
>sp|LHDAG_HDVP1|LARGE delta antigen|Hepatitis delta virus genotype III
Query: 2 AVPGPGGVN 10
A P PGGVN
Sbjct: 144 AGPRPGGVN 152
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 PAVPGPGGVN 10
PA+P G N
Sbjct: 275 PALPNCSGYN 284
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PAVPGPGGVN 10
PA+P G N
Sbjct: 275 PALPNCSGYN 284
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 PAVPGPGG 8
P+ PGP G
Sbjct: 334 PSQPGPSG 341
>sp|PG094_VARV|ENTRY-FUSION complex protein OPG094|Variola virus
Query: 5 GPGGVN 10
GPGG++
Sbjct: 69 GPGGLS 74
>sp|PG094_VAR67|ENTRY-FUSION complex protein OPG094|Variola virus (isolate
Query: 5 GPGGVN 10
GPGG++
Sbjct: 69 GPGGLS 74
>sp|PG094_VACCT|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Tian Tan)
Query: 5 GPGGVN 10
GPGG++
Sbjct: 69 GPGGLS 74
>sp|PG094_VACCC|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 GPGGVN 10
GPGG++
Sbjct: 69 GPGGLS 74
>sp|PG094_VACCA|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Ankara) (VACV)
Query: 5 GPGGVN 10
GPGG++
Sbjct: 69 GPGGLS 74
>sp|PG094_MONPV|ENTRY-FUSION complex protein OPG094|Monkeypox virus (MPXV)
Query: 5 GPGGVN 10
GPGG++
Sbjct: 69 GPGGLS 74
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 AVPGPGGVN 10
A+P P G N
Sbjct: 149 AIPTPKGPN 157
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 VPGPGGVN 10
V PGG+N
Sbjct: 967 VLNPGGLN 974
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 3 VPGPGGVN 10
V PGG+N
Sbjct: 967 VLNPGGLN 974
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 PAVPGPGG 8
PA PG GG
Sbjct: 752 PAAPGAGG 759
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PAVPGPGGVN 10
P P P G N
Sbjct: 444 PRGPSPAGAN 453
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 AVPGPGGV 9
+P PGG+
Sbjct: 679 GIPHPGGL 686
>sp|LHDAG_HDVV3|LARGE delta antigen|Hepatitis delta virus genotype III
Query: 2 AVPGPGGVN 10
A P PGGVN
Sbjct: 144 AGPRPGGVN 152
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 3 VPGPGGV 9
+PG GG+
Sbjct: 578 IPGAGGI 584
>sp|HBSAG_HBVA9|LARGE envelope protein|Hepatitis B virus genotype A3
Query: 1 PAVPGPGGVN 10
PAVP P N
Sbjct: 89 PAVPPPASTN 98
>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)
Query: 1 PAVPG 5
PA+PG
Sbjct: 95 PAIPG 99
>sp|LHDAG_HDVV1|LARGE delta antigen|Hepatitis delta virus genotype III
Query: 2 AVPGPGGVN 10
A P PGGVN
Sbjct: 144 AGPRPGGVN 152
>sp|HBSAG_HBVA1|LARGE envelope protein|Hepatitis B virus genotype A1
Query: 1 PAVPGPGGVN 10
PAVP P N
Sbjct: 89 PAVPPPASTN 98
18|Sequence|86|95|PGGVNCAVGS
>sp|GI_HHV23|ENVELOPE glycoprotein I|Human herpesvirus 2 (strain 333)
Query: 1 PGGVNCAV 8
PGGV+CAV
Sbjct: 299 PGGVSCAV 306
>sp|GI_HHV2H|ENVELOPE glycoprotein I|Human herpesvirus 2 (strain HG52)
Query: 1 PGGVNCAV 8
PGGV+CAV
Sbjct: 299 PGGVSCAV 306
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 PGGVNCAV 8
P GV CAV
Sbjct: 5901 PKGVRCAV 5908
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 3 GVNCAVGS 10
VNCAVG+
Sbjct: 1076 AVNCAVGN 1083
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 GVNCAVGS 10
VNCAVG+
Sbjct: 1076 AVNCAVGN 1083
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 GVNCAVGS 10
VNCAVG+
Sbjct: 1076 AVNCAVGN 1083
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 2 GGVNCAVG 9
GGV CA G
Sbjct: 1684 GGVLCATG 1691
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 GVNCAVGS 10
VNCAVG+
Sbjct: 1077 AVNCAVGN 1084
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 NCAVGS 10
NCAVGS
Sbjct: 1082 NCAVGS 1087
Query: 4 VNCAVGS 10
V CAVGS
Sbjct: 353 VRCAVGS 359
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 NCAVGS 10
NCAVGS
Sbjct: 1083 NCAVGS 1088
Query: 4 VNCAVGS 10
+ CAVGS
Sbjct: 354 IRCAVGS 360
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 PGGVNCAV 8
P G+ CAV
Sbjct: 5926 PKGIRCAV 5933
Query: 4 VNCAVGS 10
+NCA+G+
Sbjct: 2757 LNCALGA 2763
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 NCAVGS 10
NCAVGS
Sbjct: 1082 NCAVGS 1087
Query: 4 VNCAVGS 10
+ CAVGS
Sbjct: 354 IRCAVGS 360
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 NCAVGS 10
NCAVGS
Sbjct: 1082 NCAVGS 1087
Query: 4 VNCAVGS 10
+ CAVGS
Sbjct: 354 IRCAVGS 360
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 NCAVGS 10
NCAVGS
Sbjct: 1083 NCAVGS 1088
Query: 4 VNCAVGS 10
+ CAVGS
Sbjct: 354 IRCAVGS 360
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 NCAVGS 10
NCAVGS
Sbjct: 1082 NCAVGS 1087
Query: 4 VNCAVGS 10
+ CAVGS
Sbjct: 353 IRCAVGS 359
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 5 NCAVGS 10
NCAVGS
Sbjct: 1069 NCAVGS 1074
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 5 NCAVGS 10
NCAVGS
Sbjct: 1070 NCAVGS 1075
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 5 NCAVGS 10
NCAVGS
Sbjct: 1072 NCAVGS 1077
>sp|FUS_HMPVC|FUSION glycoprotein F0|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 3 GVNCAVGS 10
GV+C++GS
Sbjct: 387 GVSCSIGS 394
>sp|GI_HHV11|ENVELOPE glycoprotein I|Human herpesvirus 1 (strain 17)
Query: 1 PGGVNCAV 8
P G++CAV
Sbjct: 316 PTGISCAV 323
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 GGVNCAV 8
GG+NC +
Sbjct: 1388 GGLNCNI 1394
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 GGVNCAV 8
GG+NC +
Sbjct: 1388 GGLNCNI 1394
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 3 GVNCAVGS 10
+NCAVG+
Sbjct: 1077 AMNCAVGN 1084
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 3 GVNCAVGS 10
+NCAVG+
Sbjct: 1074 AMNCAVGN 1081
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 GGVNC 6
GG+NC
Sbjct: 1387 GGLNC 1391
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 GGVNC 6
GG+NC
Sbjct: 1387 GGLNC 1391
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 GGVNC 6
GG+NC
Sbjct: 1386 GGLNC 1390
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 GGVNC 6
GG+NC
Sbjct: 1386 GGLNC 1390
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 3 GVNCAVGS 10
+NCAVG+
Sbjct: 1077 AMNCAVGN 1084
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 3 GVNCAVGS 10
+NCAVG+
Sbjct: 1083 AMNCAVGN 1090
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 4 VNCAVGS 10
+NCA+G+
Sbjct: 2757 LNCALGA 2763
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 2 GGVNCAVGS 10
GGV+ ++GS
Sbjct: 1803 GGVSMSLGS 1811
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 5 NCAVGS 10
NCAVG+
Sbjct: 1072 NCAVGN 1077
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 3 GVNCAVGS 10
++CAVGS
Sbjct: 1084 AMDCAVGS 1091
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 5 NCAVGS 10
NCAVG+
Sbjct: 1085 NCAVGN 1090
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 5 NCAVGS 10
NCAVG+
Sbjct: 1085 NCAVGN 1090
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 5 NCAVGS 10
NCAVG+
Sbjct: 1072 NCAVGN 1077
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 3 GVNCAVGS 10
++CAVGS
Sbjct: 1084 AMDCAVGS 1091
19|Sequence|91|100|CAVGSAMLTR
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 CAVGSAML 8
C VG AML
Sbjct: 2368 CGVGGAML 2375
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 CAVGSAML 8
C VG AML
Sbjct: 2368 CGVGGAML 2375
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 CAVGSAML 8
C +G AML
Sbjct: 2368 CGIGGAML 2375
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 CAVGSAMLTR 10
CA A LTR
Sbjct: 1230 CAQSPAALTR 1239
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 CAVGSAMLTR 10
C V +A++TR
Sbjct: 2828 CPVVAAIITR 2837
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 CAVGSAML 8
C +G AML
Sbjct: 2367 CGIGCAML 2374
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 CAVGSAML 8
C +G AML
Sbjct: 2367 CGIGCAML 2374
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 CAVGSAML 8
C +G AML
Sbjct: 2367 CGIGCAML 2374
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 CAVGSAML 8
C +G AML
Sbjct: 2367 CGIGCAML 2374
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 CAVGSAML 8
C +G AML
Sbjct: 2367 CGIGCAML 2374
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 CAVGSAML 8
C +G AML
Sbjct: 2367 CGIGCAML 2374
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 CAVGSAMLTR 10
C V +A++TR
Sbjct: 2828 CPVVAAIITR 2837
20|Sequence|96|105|AMLTRAAPGP
>sp|CAP6_ADE02|PRE-PROTEIN VI|Human adenovirus C serotype 2
Query: 1 AMLTRAAPGP 10
A L RAA GP
Sbjct: 209 ASLRRAASGP 218
>sp|CAP6_ADE05|PRE-PROTEIN VI|Human adenovirus C serotype 5
Query: 1 AMLTRAAPGP 10
A L RAA GP
Sbjct: 209 ASLRRAASGP 218
>sp|TRX2_VZVD|TRIPLEX capsid protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 AMLTRAAPG 9
A++TR PG
Sbjct: 72 AVITRVIPG 80
21|Sequence|101|110|AAPGPRRSED
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 2 APGPRRSED 10
PGP +SED
Sbjct: 202 GPGPAKSED 210
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 AAPGPRRSED 10
AA GPR +ED
Sbjct: 1798 AALGPRDTED 1807
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 AAPGPRRSED 10
AA GPR +ED
Sbjct: 1798 AALGPRDTED 1807
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 AAPGPRRSED 10
AA GPR +ED
Sbjct: 1798 AALGPRDTED 1807
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 AAPGPRRSED 10
AA GPR +ED
Sbjct: 1798 AALGPRDTED 1807
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 AAPGPRRSED 10
AA GPR +ED
Sbjct: 1798 AALGPRDTED 1807
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 AAPGPRRSED 10
AA GPR +ED
Sbjct: 1798 AALGPRDTED 1807
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 AAPGPRRSED 10
AA GPR +ED
Sbjct: 1798 AALGPRDTED 1807
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 AAPGPRRSED 10
AA GPR +ED
Sbjct: 1798 AALGPRDTED 1807
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 AAPGPRRSED 10
AA GPR +ED
Sbjct: 1798 AALGPRDTED 1807
>sp|UL32_EBVB9|PACKAGING protein UL32 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PGPRRSED 10
PGPR +D
Sbjct: 231 PGPRTCKD 238
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 1 AAPGPRRSED 10
+ P PR S+D
Sbjct: 262 SPPEPRYSDD 271
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 AAPGPRRSED 10
+ P PR S+D
Sbjct: 262 SPPEPRYSDD 271
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 AAPGPRRSED 10
+ P PR S+D
Sbjct: 263 SPPEPRYSDD 272
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 AAPGPRRSED 10
+ P PR S+D
Sbjct: 262 SPPEPRYSDD 271
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 AAPGPRRSED 10
+ P PR S+D
Sbjct: 262 SPPEPRYSDD 271
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 AAPGPRRSED 10
+ P PR S+D
Sbjct: 262 SPPEPRYSDD 271
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 AAPGPRRSED 10
+ P PR S+D
Sbjct: 262 SPPEPRYSDD 271
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 1 AAPGPRRSED 10
+ P PR S+D
Sbjct: 263 SPPEPRYSDD 272
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 AAPGPRRSED 10
+ P PR S+D
Sbjct: 262 SPPEPRYSDD 271
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 3 PGPRRSED 10
PGP R+E
Sbjct: 1630 PGPERAEQ 1637
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 PGPRRSED 10
PGP R+E
Sbjct: 1616 PGPERAEQ 1623
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 PGPRRSED 10
PGP R+E
Sbjct: 1616 PGPERAEQ 1623
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 PGPRRSED 10
PGP R+E
Sbjct: 1631 PGPERAEQ 1638
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 PGPRRSED 10
PGP R+E
Sbjct: 1631 PGPERAEQ 1638
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 PGPRRSED 10
PGP R+E
Sbjct: 1616 PGPERAEQ 1623
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 APGPRRSED 10
A P+R+ED
Sbjct: 373 AHNPKRAED 381
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 AAPGPR 6
AAP PR
Sbjct: 476 AAPAPR 481
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 AAPGPR 6
AAP PR
Sbjct: 476 AAPAPR 481
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 AAPGPR 6
AAP PR
Sbjct: 476 AAPAPR 481
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 4 GPRRSED 10
GPR ED
Sbjct: 2775 GPRYEED 2781
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 4 GPRRSED 10
GPR ED
Sbjct: 2771 GPRYEED 2777
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 2 APGPRRSE 9
APG RSE
Sbjct: 945 APGSLRSE 952
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 4 GPRRSED 10
GPR ED
Sbjct: 2769 GPRYEED 2775
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 4 GPRRSED 10
GPR ED
Sbjct: 2771 GPRYEED 2777
>sp|DR7_HHV6U|TRANSACTIVATOR protein DR7|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PGPRRSE 9
PGPR E
Sbjct: 272 PGPREVE 278
>sp|REX_HTL1L|PROTEIN Rex|Human T-cell leukemia virus 1
Query: 4 GPRRSE 9
GPRRS+
Sbjct: 7 GPRRSQ 12
22|Sequence|106|115|RRSEDEPPAA
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 RRSEDEPPAA 10
R S EPP+A
Sbjct: 1703 RGSSPEPPSA 1712
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 RRSEDEPPAA 10
R S EPP+A
Sbjct: 1703 RGSSPEPPSA 1712
>sp|ORF49_HHV8P|PROTEIN ORF49|Human herpesvirus 8 type P
Query: 4 EDEPPAA 10
E EPP A
Sbjct: 136 ESEPPTA 142
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 4 EDEPPA 9
+DEPP+
Sbjct: 2077 KDEPPS 2082
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 4 EDEPPA 9
+DEPP+
Sbjct: 2085 KDEPPS 2090
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 4 EDEPPA 9
+DEPP+
Sbjct: 2076 KDEPPS 2081
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 RRSEDEPPAA 10
R + EPP+A
Sbjct: 1703 RGASPEPPSA 1712
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 RRSEDEPPAA 10
R + EPP+A
Sbjct: 1703 RGASPEPPSA 1712
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 RRSEDEPPAA 10
R + EPP+A
Sbjct: 1703 RGASPEPPSA 1712
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 RRSEDEPPAA 10
R + EPP+A
Sbjct: 1703 RGASPEPPSA 1712
>sp|NCAP_MEASI|NUCLEOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 2 RSEDEPP 8
+SE+EPP
Sbjct: 424 QSENEPP 430
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 RRSEDEPPAA 10
R + EPP+A
Sbjct: 1703 RGASPEPPSA 1712
>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 4 EDEPPAA 10
ED PP+A
Sbjct: 412 EDSPPSA 418
>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 4 EDEPPAA 10
ED PP+A
Sbjct: 412 EDSPPSA 418
>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 4 EDEPPAA 10
ED PP+A
Sbjct: 412 EDSPPSA 418
>sp|PAP_HHV2H|DNA polymerase processivity factor|Human herpesvirus 2 (strain HG52)
Query: 2 RSEDEPP 8
R+ED PP
Sbjct: 24 RTEDWPP 30
23|Sequence|111|120|EPPAASASAA
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 EPPAASASA 9
E PAA ASA
Sbjct: 813 ETPAALASA 821
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 1 EPPAASASAA 10
+PP +SAA
Sbjct: 308 QPPKLQSSAA 317
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1)
Query: 2 PPAASASAA 10
PP AS SAA
Sbjct: 410 PPRASGSAA 418
24|Sequence|116|125|SASAAPPPQR
>sp|HN_PIV5|HEMAGGLUTININ-NEURAMINIDASE virus 5 (strain W3)
Query: 3 SAAPPPQR 10
SAAPP QR
Sbjct: 253 SAAPPEQR 260
>sp|HN_PIV5L|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Human/LN)
Query: 3 SAAPPPQR 10
SAAPP QR
Sbjct: 253 SAAPPEQR 260
>sp|VE2_HPV57|REGULATORY protein E2|Human papillomavirus 57
Query: 2 ASAAPPPQR 10
A ++PPP+R
Sbjct: 245 APSSPPPKR 253
>sp|UL05_HCMVM|PROTEIN UL5|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SASAAPPPQR 10
S + APPP R
Sbjct: 76 SLAIAPPPDR 85
>sp|UL05_HCMVA|PROTEIN UL5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SASAAPPPQR 10
S + APPP R
Sbjct: 76 SLAIAPPPDR 85
>sp|HN_PIV5D|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI+)
Query: 3 SAAPPPQR 10
S APP QR
Sbjct: 253 STAPPEQR 260
>sp|NSP2_ROTHC|NON-STRUCTURAL protein 2|Rotavirus C (isolate RVC/Human/United
Query: 5 APPPQ 9
APPP+
Sbjct: 52 APPPE 56
>sp|HN_PIV5C|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI-)
Query: 3 SAAPPPQR 10
S APP QR
Sbjct: 253 STAPPEQR 260
>sp|US17_HCMVM|PROTEIN US17|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 APPPQR 10
APPP R
Sbjct: 13 APPPPR 18
>sp|US17_HCMVA|UNCHARACTERIZED protein HVLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 APPPQR 10
APPP R
Sbjct: 13 APPPPR 18
>sp|CEP2_HHV8P|CYTOPLASMIC envelopment protein 2|Human herpesvirus 8 type P
Query: 5 APPPQR 10
APPP R
Sbjct: 121 APPPSR 126
>sp|TEG3_HHV2H|TEGUMENT protein UL14|Human herpesvirus 2 (strain HG52)
Query: 1 SASAAPPPQ 9
A AAPPP+
Sbjct: 182 DAQAAPPPE 190
>sp|PB2_I01A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 286 AAAPPEQ 292
>sp|PB2_I01A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 286 AAAPPEQ 292
>sp|PB2_I02A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Guinea
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 614 TAAPPEQ 620
>sp|PB2_I07A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I67A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Tokyo/3/1967
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 1 SASAAPPPQ 9
A A PPPQ
Sbjct: 1255 DADAGPPPQ 1263
>sp|PB2_I88A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/8/1988
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I54A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I77AB|POLYMERASE basic protein 2|Influenza A virus (strain A/USSR/90/1977
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I75A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Beijing/39/1975
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I71A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/1/1971
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I70A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Qu/7/1970
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I69A0|POLYMERASE basic protein 2|Influenza A virus (strain A/England/878/1969
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I68A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I57A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Singapore/1/1957
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I78A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/18/1978
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I75A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Victoria/3/1975
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I96A3|POLYMERASE basic protein 2|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I96A2|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I83A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I80A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/4/1980
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I79A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Kiev/59/1979
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I78A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/2/1978
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I76A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/110/1976
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I73A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Port
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I72A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/101/1972
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I72A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/102/1972
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I72A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Udorn/307/1972
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I68A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Northern
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I68A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Korea/426/1968
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I57A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I57A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I57A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/1957
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I57A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Japan/305/1957
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I51A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Albany/12/1951
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I47A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Fort
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I40A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hickox/1940
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I00A1|POLYMERASE basic protein 2|Influenza A virus (strain A/New
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I02A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 TAAPPEQ 628
>sp|PB2_I93A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I83A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chile/1/1983
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I80AA|POLYMERASE basic protein 2|Influenza A virus (strain A/India/6263/1980
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I77AA|POLYMERASE basic protein 2|Influenza A virus (strain A/Brazil/11/1978
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I60A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Ann
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 4 AAPPPQ 9
AAPPPQ
Sbjct: 355 AAPPPQ 360
>sp|PB2_I45A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I43A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Iowa/1943
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I36A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Henry/1936
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I34A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Puerto
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I06A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I000X|POLYMERASE basic protein 2|Influenza A virus (strain A/X-31
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I56A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPEQ 628
>sp|PB2_I97A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPEQ 628
>sp|PB2_I80A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPEQ 628
>sp|PB2_I77A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I73A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/London/1416/1973
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPEQ 628
>sp|PB2_I02A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPEQ 628
>sp|PB2_I000F|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Weybridge
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPEQ 628
>sp|V_PI4HB|NON-STRUCTURAL protein V|Human parainfluenza 4b virus (strain
Query: 2 ASAAPPPQR 10
A++ PPP R
Sbjct: 30 ATSQPPPNR 38
>sp|PB2_I00A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Duck/Hong
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPEQ 628
>sp|PB2_I33A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Wilson-Smith/1933
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I30A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I18A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Brevig
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I85A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPEQ 628
>sp|PB2_I03A1|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPEQ 628
>sp|PB2_I02A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPEQ 628
>sp|PB2_I02A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPEQ 628
>sp|PB2_I02A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPEQ 628
>sp|PB2_I97A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPEQ 628
>sp|PB2_I59A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPEQ 628
>sp|PB2_I02A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 616 AAAPPEQ 622
>sp|PB2_I01A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPEQ 628
>sp|PB2_I01A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 615 AAAPPEQ 621
>sp|PB2_I67A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I61A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PB2_I05A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPEQ 628
>sp|PB2_I03A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPEQ 628
>sp|PB2_I02A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 621 AAAPPEQ 627
>sp|PB2_I77AC|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPKQ 628
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 1 SASAAPPPQ 9
+A PPPQ
Sbjct: 488 TAGGTPPPQ 496
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 SASAAPPPQR 10
+ +A PPP++
Sbjct: 65 TGTAGPPPKQ 74
>sp|PB2_I78A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Mallard/New
Query: 3 SAAPPPQ 9
+AAPP Q
Sbjct: 622 AAAPPEQ 628
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 2 ASAAPPPQR 10
A PPP R
Sbjct: 1442 APETPPPPR 1450
25|Sequence|121|130|PPPQRDEEEP
>sp|VL1_HPV44|MAJOR capsid protein L1|Human papillomavirus 44
Query: 1 PPPQRDEEEP 10
PPP++ +++P
Sbjct: 428 PPPEKAKQDP 437
>sp|PKG2_ADE05|PACKAGING protein 2|Human adenovirus C serotype 5
Query: 1 PPPQRDEEE 9
PPP DEEE
Sbjct: 10 PPPPTDEEE 18
>sp|M21_HRSVB|PROTEIN M2-1|Human respiratory syncytial virus B
Query: 5 RDEEEP 10
RD EEP
Sbjct: 115 RDNEEP 120
>sp|UL79_HCMVM|PROTEIN UL79|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 RDEEEP 10
RDEE P
Sbjct: 4 RDEENP 9
>sp|UL79_HCMVA|PROTEIN UL79|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 RDEEEP 10
RDEE P
Sbjct: 4 RDEENP 9
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 1 PPPQRDEEE 9
PPP+RD +
Sbjct: 131 PPPERDGAQ 139
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 PPPQRD 6
PPP RD
Sbjct: 32 PPPNRD 37
>sp|SF33K_ADE05|PROTEIN 33K|Human adenovirus C serotype 5
Query: 1 PPPQRDEEE 9
PPP DEEE
Sbjct: 10 PPPPTDEEE 18
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 1 PPPQRDEEE 9
P P+ EEE
Sbjct: 772 PGPKNPEEE 780
26|Sequence|126|135|DEEEPDGVPE
>sp|ICP22_VZVO|TRANSCRIPTIONAL regulator ICP22 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 DEEEPDGVP 9
D EPDGVP
Sbjct: 202 DSCEPDGVP 210
>sp|ICP22_VZVD|TRANSCRIPTIONAL regulator ICP22 homolog|Varicella-zoster virus (strain Dumas)
Query: 1 DEEEPDGVP 9
D EPDGVP
Sbjct: 202 DSCEPDGVP 210
>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65
Query: 2 EEEPDGVP 9
EEE +GVP
Sbjct: 576 EEESNGVP 583
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 2 EEEPDGVP 9
E+EP G P
Sbjct: 18 EDEPRGTP 25
>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4
Query: 2 EEEPDGVP 9
EEE +GVP
Sbjct: 577 EEENNGVP 584
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 2 EEEPDG 7
EE PDG
Sbjct: 721 EERPDG 726
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 2 EEEPDG 7
EE PDG
Sbjct: 721 EERPDG 726
>sp|VE1_HPV63|REPLICATION protein E1|Human papillomavirus type 63
Query: 1 DEEEPDGVPE 10
++EE DG P+
Sbjct: 595 EDEESDGKPQ 604
>sp|NCAP_SFTSV|NUCLEOPROTEIN phlebovirus (isolate SFTSV/Human/China/HB29/2010) (Severe
Query: 5 PDGVP 9
PDGVP
Sbjct: 227 PDGVP 231
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 DEEEPDGV 8
D E+PD V
Sbjct: 162 DNEDPDDV 169
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 2 EEEPDGVP 9
E EP G P
Sbjct: 18 EAEPRGTP 25
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 2 EEEPDGVP 9
E EP G P
Sbjct: 18 EAEPRGTP 25
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 EEEPDGVP 9
E EP G P
Sbjct: 18 EAEPRGTP 25
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 2 EEEPDGVP 9
E EP G P
Sbjct: 18 EAEPRGTP 25
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 2 EEEPDGVP 9
E EP G P
Sbjct: 18 EAEPRGTP 25
>sp|VE8E2_HPV39|PROTEIN E8^E2C|Human papillomavirus 39
Query: 4 EPDGV 8
EPDGV
Sbjct: 64 EPDGV 68
>sp|VE2_HPV39|REGULATORY protein E2|Human papillomavirus 39
Query: 4 EPDGV 8
EPDGV
Sbjct: 259 EPDGV 263
>sp|VE7_HPV52|PROTEIN E7|Human papillomavirus 52
Query: 1 DEEEPDGV 8
DEE+ DGV
Sbjct: 33 DEEDTDGV 40
>sp|GM_HHV11|ENVELOPE glycoprotein M|Human herpesvirus 1 (strain 17)
Query: 5 PDGVPE 10
P G+PE
Sbjct: 392 PPGIPE 397
>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38
Query: 5 PDGVPE 10
PD VPE
Sbjct: 439 PDAVPE 444
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 5 PDGVPE 10
P+GVP+
Sbjct: 770 PNGVPQ 775
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 1 DEEEPDGVPE 10
D EE +PE
Sbjct: 879 DSEESSALPE 888
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 PDGVPE 10
P+GVP+
Sbjct: 195 PEGVPQ 200
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 PDGVPE 10
P+GVP+
Sbjct: 195 PEGVPQ 200
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 PDGVPE 10
P+GVP+
Sbjct: 195 PEGVPQ 200
>sp|GC_HHV2H|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain HG52)
Query: 5 PDGVP 9
PDG+P
Sbjct: 417 PDGIP 421
>sp|GC_HHV2G|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain G)
Query: 5 PDGVP 9
PDG+P
Sbjct: 416 PDGIP 420
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 DEEEPDGVP 9
+ PDG P
Sbjct: 94 ESPSPDGTP 102
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 DEEEPDGVP 9
+ PDG P
Sbjct: 94 ESPSPDGTP 102
>sp|GC_HHV23|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain 333)
Query: 5 PDGVP 9
PDG+P
Sbjct: 417 PDGIP 421
27|Sequence|131|140|DGVPEKGKSS
>sp|PORTL_HCMVM|PORTAL protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GVPEKGKSS 10
GVPE+G +S
Sbjct: 640 GVPERGTAS 648
>sp|PORTL_HCMVA|PORTAL protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GVPEKGKSS 10
GVPE+G +S
Sbjct: 640 GVPERGTAS 648
>sp|LF1_EBVG|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 GVPEKGK 8
GVPE+G+
Sbjct: 220 GVPERGR 226
>sp|LF1_EBVA8|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 GVPEKGK 8
GVPE+G+
Sbjct: 220 GVPERGR 226
>sp|LF1_EBVB9|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 GVPEKGK 8
GVPE+G+
Sbjct: 220 GVPERGR 226
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 2 GVPEKGKSS 10
GVP GKS+
Sbjct: 719 GVPGSGKSA 727
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 2 GVPEKGKSS 10
GVP GKS+
Sbjct: 720 GVPGSGKSA 728
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 2 GVPEKGKSS 10
GVP GKS+
Sbjct: 720 GVPGSGKSA 728
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 2 GVPEKGKSS 10
GVP GKS+
Sbjct: 719 GVPGSGKSA 727
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 GVPEKGKSS 10
GVP GKS+
Sbjct: 721 GVPGSGKSA 729
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 GVPEKGKSS 10
GVP GKS+
Sbjct: 721 GVPGSGKSA 729
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 GVPEKGKSS 10
GVP GKS+
Sbjct: 723 GVPGSGKSA 731
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 GVPEKGKSS 10
GVP GKS+
Sbjct: 721 GVPGSGKSA 729
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 2 GVPEKGKSS 10
GVP GKS+
Sbjct: 721 GVPGSGKSA 729
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 GVPEKGKSS 10
GVP GKS+
Sbjct: 721 GVPGSGKSA 729
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 GVPEKGKS 9
GVP GKS
Sbjct: 975 GVPGSGKS 982
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 GVPEKGKS 9
GVP GKS
Sbjct: 975 GVPGSGKS 982
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 2 GVPEKGKSS 10
G P GKSS
Sbjct: 432 GPPNSGKSS 440
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 GVPEKGKS 9
GVP GKS
Sbjct: 975 GVPGSGKS 982
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 2 GVPEKGKS 9
GVP GKS
Sbjct: 722 GVPGSGKS 729
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 GVPEKGKS 9
GVP GKS
Sbjct: 975 GVPGSGKS 982
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 GVPEKGKS 9
GVP GKS
Sbjct: 975 GVPGSGKS 982
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 2 GVPEKGKS 9
GVP GKS
Sbjct: 989 GVPGSGKS 996
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 GVPEKGKS 9
GVP GKS
Sbjct: 990 GVPGSGKS 997
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 GVPEKGKS 9
GVP GKS
Sbjct: 990 GVPGSGKS 997
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 2 GVPEKGKSS 10
G P GKSS
Sbjct: 434 GPPNSGKSS 442
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 2 GVPEKGKS 9
GVP GKS
Sbjct: 973 GVPGSGKS 980
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 2 GVPEKGKS 9
GVP GKS
Sbjct: 719 GVPGSGKS 726
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 GVPEKGKS 9
GVP GKS
Sbjct: 719 GVPGSGKS 726
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 GVPEKGKS 9
GVP GKS
Sbjct: 719 GVPGSGKS 726
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 2 GVPEKGKSS 10
G P GKSS
Sbjct: 434 GPPNSGKSS 442
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 GVPEKGKS 9
GVP GKS
Sbjct: 719 GVPGSGKS 726
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 2 GVPEKGKSS 10
G P GKSS
Sbjct: 432 GPPNSGKSS 440
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 2 GVPEKGKSS 10
G P GKSS
Sbjct: 432 GPPNSGKSS 440
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 2 GVPEKGKSS 10
G P GKSS
Sbjct: 433 GPPNTGKSS 441
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 GVPEKGKS 9
GVP GKS
Sbjct: 721 GVPGSGKS 728
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 GVPEKGKS 9
GVP GKS
Sbjct: 721 GVPGSGKS 728
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 GVPEKGKS 9
GVP GKS
Sbjct: 721 GVPGSGKS 728
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 GVPEKGKS 9
GVP GKS
Sbjct: 721 GVPGSGKS 728
>sp|TRM1_HHV7J|TRIPARTITE terminase subunit 1|Human herpesvirus 7 (strain JI)
Query: 3 VPEKGKS 9
VP +GKS
Sbjct: 199 VPNQGKS 205
>sp|VE1_HPV6B|REPLICATION protein E1|Human papillomavirus type 6b
Query: 2 GVPEKG 7
GVPE G
Sbjct: 154 GVPENG 159
>sp|VE1_HPV6A|REPLICATION protein E1|Human papillomavirus type 6a
Query: 2 GVPEKG 7
GVPE G
Sbjct: 154 GVPENG 159
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 2 GVPEKGKSS 10
G P+ GKS+
Sbjct: 460 GPPDTGKSN 468
>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60
Query: 2 GVPEKGKS 9
G P+ GKS
Sbjct: 437 GPPDTGKS 444
>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48
Query: 2 GVPEKGKS 9
G P+ GKS
Sbjct: 422 GPPDTGKS 429
>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37
Query: 2 GVPEKGKS 9
G P+ GKS
Sbjct: 437 GPPDTGKS 444
>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22
Query: 2 GVPEKGKS 9
G P+ GKS
Sbjct: 436 GPPDTGKS 443
>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17
Query: 2 GVPEKGKS 9
G P+ GKS
Sbjct: 437 GPPDTGKS 444
>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15
Query: 2 GVPEKGKS 9
G P+ GKS
Sbjct: 430 GPPDTGKS 437
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 2 GVPEKGKS 9
G P+ GKS
Sbjct: 433 GPPDTGKS 440
>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38
Query: 2 GVPEKGKS 9
G P+ GKS
Sbjct: 432 GPPDTGKS 439
>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35
Query: 2 GVPEKGKS 9
G P GKS
Sbjct: 463 GAPNTGKS 470
>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23
Query: 2 GVPEKGKS 9
G P+ GKS
Sbjct: 435 GPPDTGKS 442
>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4
Query: 2 GVPEKGKS 9
G P+ GKS
Sbjct: 428 GPPDTGKS 435
>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65
Query: 2 GVPEKGKS 9
G P+ GKS
Sbjct: 427 GPPDTGKS 434
>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31
Query: 2 GVPEKGKS 9
G P GKS
Sbjct: 457 GAPNTGKS 464
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 DGVPE 5
DG+PE
Sbjct: 1625 DGIPE 1629
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 DGVPE 5
DG+PE
Sbjct: 1625 DGIPE 1629
28|Sequence|136|145|KGKSSGPSAR
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 KGKSSGPSAR 10
KGK GP R
Sbjct: 8 KGKGGGPPRR 17
>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)
Query: 1 KGKSSGPSAR 10
KGK GP R
Sbjct: 8 KGKGGGPPRR 17
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 KGKSSGPSAR 10
KGK GP R
Sbjct: 8 KGKGGGPPRR 17
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 KGKSSGPSAR 10
KGK GP R
Sbjct: 8 KGKGGGPPRR 17
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 KGKSSGPSAR 10
KGK GP R
Sbjct: 8 KGKGGGPPRR 17
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 KGKSSGPSAR 10
KGK GP R
Sbjct: 6 KGKGGGPPRR 15
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 KGKSSGPSAR 10
KGK GP R
Sbjct: 8 KGKGGGPPRR 17
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 KGKSSGPSAR 10
KGK GP R
Sbjct: 8 KGKGGGPPRR 17
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 KGKSSGPSAR 10
KGK GP R
Sbjct: 8 KGKGGGPPRR 17
>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 KGKSSGPS 8
KG SGP+
Sbjct: 185 KGNCSGPT 192
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 KGKSSGPSAR 10
KGK GP R
Sbjct: 8 KGKGGGPPRR 17
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 KGKSSGPSAR 10
KGK GP R
Sbjct: 8 KGKGGGPPRR 17
>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)
Query: 1 KGKSSGPS 8
KG SGP+
Sbjct: 185 KGNCSGPT 192
>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)
Query: 1 KGKSSGPS 8
KG SGP+
Sbjct: 185 KGNCSGPT 192
>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)
Query: 1 KGKSSGPS 8
KG SGP+
Sbjct: 185 KGNCSGPT 192
>sp|AN_VZVO|ALKALINE nuclease|Varicella-zoster virus (strain Oka vaccine)
Query: 2 GKSSGPSAR 10
GK++ P+AR
Sbjct: 184 GKTNEPAAR 192
>sp|AN_VZVD|ALKALINE nuclease|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 GKSSGPSAR 10
GK++ P+AR
Sbjct: 184 GKTNEPAAR 192
>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)
Query: 1 KGKSSGPS 8
KG SGP+
Sbjct: 185 KGNCSGPT 192
>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 KGKSSGPS 8
KG SGP+
Sbjct: 185 KGNCSGPT 192
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 GKSSGPSAR 10
GK GP R
Sbjct: 3166 GKGKGPKVR 3174
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 2 GKSSGPSA 9
G +SGPSA
Sbjct: 115 GGTSGPSA 122
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 2 GKSSGPSA 9
G +SGPSA
Sbjct: 115 GGTSGPSA 122
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 3 KSSGPSAR 10
+ GPSAR
Sbjct: 1080 RDRGPSAR 1087
29|Sequence|141|150|GPSARKGKGQ
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 1 GPSARK 6
GPSARK
Sbjct: 342 GPSARK 347
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 GPSARK 6
GPSAR+
Sbjct: 343 GPSARR 348
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 GPSARKGKGQ 10
GPSA+K K +
Sbjct: 60 GPSAKKPKKE 69
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 GPSARKGKGQ 10
GPSA+K K +
Sbjct: 60 GPSAKKPKKE 69
>sp|VME1_CVHOC|MEMBRANE protein|Human coronavirus OC43 (HCoV-OC43)
Query: 2 PSARKGKG 9
PS +KG G
Sbjct: 213 PSTQKGSG 220
>sp|HBSAG_HBVH3|LARGE envelope protein|Hepatitis B virus genotype H
Query: 3 SARKGKGQ 10
+AR+G GQ
Sbjct: 7 TARRGMGQ 14
>sp|HBSAG_HBVH2|LARGE envelope protein|Hepatitis B virus genotype H
Query: 3 SARKGKGQ 10
+AR+G GQ
Sbjct: 7 TARRGMGQ 14
>sp|HBSAG_HBVH1|LARGE envelope protein|Hepatitis B virus genotype H
Query: 3 SARKGKGQ 10
+AR+G GQ
Sbjct: 7 TARRGMGQ 14
30|Sequence|146|155|KGKGQIEKRK
>sp|NCAP_RABVS|NUCLEOPROTEIN virus (strain SAD B19)
Query: 2 GKGQIEKR 9
GKG E+R
Sbjct: 351 GKGTFERR 358
>sp|NCAP_RABVR|NUCLEOPROTEIN virus (strain China/MRV) (RABV)
Query: 2 GKGQIEKR 9
GKG E+R
Sbjct: 351 GKGTFERR 358
>sp|NCAP_RABVP|NUCLEOPROTEIN virus (strain Pasteur vaccins
Query: 2 GKGQIEKR 9
GKG E+R
Sbjct: 351 GKGTFERR 358
>sp|NCAP_RABVH|NUCLEOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 2 GKGQIEKR 9
GKG E+R
Sbjct: 351 GKGTFERR 358
>sp|NCAP_RABVF|NUCLEOPROTEIN virus (isolate Fox/Ontario/1991) (RABV)
Query: 2 GKGQIEKR 9
GKG E+R
Sbjct: 351 GKGTFERR 358
>sp|NCAP_RABVE|NUCLEOPROTEIN virus (strain ERA) (RABV)
Query: 2 GKGQIEKR 9
GKG E+R
Sbjct: 351 GKGTFERR 358
>sp|NCAP_RABVC|NUCLEOPROTEIN virus (strain CVS-11) (RABV)
Query: 2 GKGQIEKR 9
GKG E+R
Sbjct: 351 GKGTFERR 358
>sp|NCAP_RABVB|NUCLEOPROTEIN virus (strain silver-haired bat-associated)
Query: 2 GKGQIEKR 9
GKG E+R
Sbjct: 351 GKGTFERR 358
>sp|NCAP_RABVA|NUCLEOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 2 GKGQIEKR 9
GKG E+R
Sbjct: 351 GKGTFERR 358
>sp|NCAP_LBV|NUCLEOPROTEIN bat virus (LBV)
Query: 2 GKGQIEKR 9
GKG E+R
Sbjct: 351 GKGTFERR 358
>sp|NCAP_ABLVH|NUCLEOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 2 GKGQIEKR 9
GKG E+R
Sbjct: 351 GKGTFERR 358
>sp|NCAP_RABVU|NUCLEOPROTEIN virus (isolate Skunk/Ontario/1991) (RABV)
Query: 2 GKGQIEKR 9
GKG E+R
Sbjct: 351 GKGTFERR 358
>sp|NCAP_RABVI|NUCLEOPROTEIN virus (strain India) (RABV)
Query: 2 GKGQIEKR 9
GKG E+R
Sbjct: 351 GKGTFERR 358
>sp|NCAP_DUVV|NUCLEOPROTEIN virus (DUVV)
Query: 2 GKGQIEKR 9
GKG E+R
Sbjct: 351 GKGTFERR 358
>sp|NCAP_ABLVB|NUCLEOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 GKGQIEKR 9
GKG E+R
Sbjct: 351 GKGTFERR 358
>sp|VP11_CTFVL|UNCHARACTERIZED protein VP11|Colorado tick fever virus (strain
Query: 2 GKGQIEKRK 10
G GQIE K
Sbjct: 126 GAGQIESLK 134
31|Sequence|151|160|IEKRKLREKR
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 3 KRKLREKR 10
KR+LRE+R
Sbjct: 708 KRRLREQR 715
>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)
Query: 2 EKRKLREKR 10
EKR+ R+KR
Sbjct: 372 EKRRERQKR 380
>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 EKRKLREKR 10
EKR+ R+KR
Sbjct: 372 EKRRERQKR 380
>sp|NSS_SFTSV|NON-STRUCTURAL protein NS-S|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 1 IEKRKLR 7
IEKR+LR
Sbjct: 160 IEKRRLR 166
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 EKRKLREK 9
EK+KLR K
Sbjct: 2061 EKKKLRPK 2068
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 EKRKLREK 9
EK+KLR K
Sbjct: 2061 EKKKLRPK 2068
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 EKRKLREK 9
EK+KLR K
Sbjct: 2061 EKKKLRPK 2068
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 EKRKLREK 9
EK+KLR K
Sbjct: 2061 EKKKLRPK 2068
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 IEKRKLREKR 10
++ ++LR+KR
Sbjct: 1097 VKPKRLRKKR 1106
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 IEKRKLREKR 10
++ ++LR+KR
Sbjct: 1097 VKPKRLRKKR 1106
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 EKRKLREK 9
EK+KLR +
Sbjct: 2061 EKKKLRPR 2068
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 EKRKLREK 9
EK+KLR +
Sbjct: 2061 EKKKLRPR 2068
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 EKRKLREK 9
EK+KLR +
Sbjct: 2061 EKKKLRPR 2068
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 EKRKLREK 9
EK+KLR +
Sbjct: 2061 EKKKLRPR 2068
>sp|PG137_VARV|PROTEIN OPG137|Variola virus
Query: 2 EKRKLREKR 10
E+R+ REKR
Sbjct: 106 EQRQQREKR 114
>sp|PG137_VAR67|PROTEIN OPG137|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 EKRKLREKR 10
E+R+ REKR
Sbjct: 106 EQRQQREKR 114
32|Sequence|156|165|LREKRRSTGV
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 LREKRRSTGV 10
REK RST V
Sbjct: 2123 FREKIRSTSV 2132
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 LREKRRST 8
LREK R+T
Sbjct: 2029 LREKERAT 2036
>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 EKRRSTGV 10
+ RRSTG+
Sbjct: 980 QSRRSTGI 987
33|Sequence|161|170|RSTGVVNIPA
>sp|NCAP_CHAVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Bolivia/810419/2003)
Query: 1 RSTGVVNI 8
RSTGVV I
Sbjct: 152 RSTGVVRI 159
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 2 STGVVNIPA 10
S+G++ +PA
Sbjct: 687 SSGIITVPA 695
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 2 STGVVNIPA 10
S GV+ +PA
Sbjct: 695 SNGVITVPA 703
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 2 STGVVNIPA 10
S GV+ +PA
Sbjct: 687 SNGVITVPA 695
>sp|RDRP_ROTWI|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 1 RSTGVVNIP 9
R G+V+IP
Sbjct: 296 RKAGLVDIP 304
>sp|RDRP_ROTHW|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 RSTGVVNIP 9
R G+V+IP
Sbjct: 296 RKAGLVDIP 304
>sp|RDRP_ROTHT|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 RSTGVVNIP 9
R G+V+IP
Sbjct: 296 RKAGLVDIP 304
>sp|RDRP_ROTHS|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 RSTGVVNIP 9
R G+V+IP
Sbjct: 296 RKAGLVDIP 304
>sp|RDRP_ROTHP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 RSTGVVNIP 9
R G+V+IP
Sbjct: 296 RKVGLVDIP 304
>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 RSTGVVNIP 9
R G+V+IP
Sbjct: 296 RKAGLVDIP 304
>sp|RDRP_ROTHD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 RSTGVVNIP 9
R G+V+IP
Sbjct: 296 RKAGLVDIP 304
>sp|RDRP_ROTH7|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 1 RSTGVVNIP 9
R G+V+IP
Sbjct: 296 RKAGLVDIP 304
>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 RSTGVVNIP 9
R G+V+IP
Sbjct: 296 RKAGLVDIP 304
>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 RSTGVVNIP 9
R G+V+IP
Sbjct: 296 RKAGLVDIP 304
>sp|HEMA_I18A0|HEMAGGLUTININ A virus (strain A/Brevig
Query: 2 STGVVNIPA 10
+TG+ NIP+
Sbjct: 332 ATGLRNIPS 340
>sp|HEMA_I88A6|HEMAGGLUTININ A virus (strain A/Swine/Indiana/1726/1988
Query: 2 STGVVNIPA 10
+TG+ NIP+
Sbjct: 332 ATGLRNIPS 340
>sp|HEMA_I67A2|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 STGVVNIPA 10
+TG+ NIP+
Sbjct: 332 ATGLRNIPS 340
>sp|HEMA_I61A1|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 STGVVNIPA 10
+TG+ NIP+
Sbjct: 332 ATGLRNIPS 340
>sp|HEMA_I83A1|HEMAGGLUTININ A virus (strain A/Chile/1/1983
Query: 3 TGVVNIPA 10
TG+ NIP+
Sbjct: 333 TGLRNIPS 340
>sp|HEMA_I33A0|HEMAGGLUTININ A virus (strain A/Wilson-Smith/1933
Query: 3 TGVVNIPA 10
TG+ NIP+
Sbjct: 332 TGLRNIPS 339
>sp|HEMA_I79A4|HEMAGGLUTININ A virus (strain A/Kiev/59/1979
Query: 3 TGVVNIPA 10
TG+ NIP+
Sbjct: 333 TGLRNIPS 340
>sp|HEMA_I40A0|HEMAGGLUTININ A virus (strain A/Hickox/1940
Query: 3 TGVVNIPA 10
TG+ NIP+
Sbjct: 333 TGLRNIPS 340
>sp|HEMA_I96A2|HEMAGGLUTININ A virus (strain A/USA:Memphis/10/1996
Query: 3 TGVVNIPA 10
TG+ NIP+
Sbjct: 333 TGLRNIPS 340
>sp|HEMA_I77AA|HEMAGGLUTININ A virus (strain A/Brazil/11/1978
Query: 3 TGVVNIPA 10
TG+ NIP+
Sbjct: 333 TGLRNIPS 340
>sp|HEMA_I77AB|HEMAGGLUTININ A virus (strain A/USSR/90/1977
Query: 3 TGVVNIPA 10
TG+ NIP+
Sbjct: 333 TGLRNIPS 340
>sp|HEMA_I54A0|HEMAGGLUTININ A virus (strain A/Leningrad/1/1954
Query: 3 TGVVNIPA 10
TG+ NIP+
Sbjct: 333 TGLRNIPS 340
>sp|HEMA_I80AA|HEMAGGLUTININ A virus (strain A/India/6263/1980
Query: 3 TGVVNIPA 10
TG+ NIP+
Sbjct: 333 TGLRNIPS 340
>sp|HEMA_I51A0|HEMAGGLUTININ A virus (strain A/USA:Albany/12/1951
Query: 3 TGVVNIPA 10
TG+ NIP+
Sbjct: 333 TGLRNIPS 340
>sp|HEMA_I43A0|HEMAGGLUTININ A virus (strain A/USA:Iowa/1943
Query: 3 TGVVNIPA 10
TG+ NIP+
Sbjct: 332 TGLRNIPS 339
>sp|HEMA_I35A3|HEMAGGLUTININ A virus (strain A/USA:Phila/1935
Query: 3 TGVVNIPA 10
TG+ NIP+
Sbjct: 333 TGLRNIPS 340
>sp|HEMA_I80A1|HEMAGGLUTININ A virus (strain A/Duck/Australia/749/1980
Query: 2 STGVVNIPA 10
+TG+ N+P+
Sbjct: 332 ATGLRNVPS 340
>sp|HEMA_I54A2|HEMAGGLUTININ A virus (strain A/Malaysia:Malaya/302/1954
Query: 3 TGVVNIPA 10
TG+ NIP+
Sbjct: 333 TGLRNIPS 340
>sp|HEMA_I45A0|HEMAGGLUTININ A virus (strain A/USA:Huston/AA/1945
Query: 3 TGVVNIPA 10
TG+ NIP+
Sbjct: 333 TGLRNIPS 340
>sp|HEMA_I34A1|HEMAGGLUTININ A virus (strain A/Puerto
Query: 3 TGVVNIPA 10
TG+ NIP+
Sbjct: 332 TGLRNIPS 339
>sp|HEMA_I84A5|HEMAGGLUTININ A virus (strain A/Swine/Ukkel/1/1984
Query: 2 STGVVNIP 9
+TG+ NIP
Sbjct: 333 ATGMRNIP 340
>sp|HEMA_I85A4|HEMAGGLUTININ A virus (strain A/Swine/Netherlands/12/1985
Query: 2 STGVVNIPA 10
+TG+ N+P+
Sbjct: 332 ATGLRNVPS 340
>sp|HEMA_I81A3|HEMAGGLUTININ A virus (strain A/Turkey/Minnesota/1661/1981
Query: 2 STGVVNIPA 10
+TG+ N+P+
Sbjct: 332 ATGLRNVPS 340
>sp|HEMA_I76A4|HEMAGGLUTININ A virus (strain A/Duck/Alberta/35/1976
Query: 2 STGVVNIPA 10
+TG+ N+P+
Sbjct: 332 ATGLRNVPS 340
>sp|HEMA_I07A0|HEMAGGLUTININ A virus (strain A/USA:Texas/UR06-0195/2007
Query: 3 TGVVNIPA 10
TG+ NIP+
Sbjct: 332 TGLRNIPS 339
>sp|HEMA_I06A0|HEMAGGLUTININ A virus (strain A/Russia:St.Petersburg/8/2006
Query: 3 TGVVNIPA 10
TG+ NIP+
Sbjct: 332 TGLRNIPS 339
>sp|HEMA_I96A3|HEMAGGLUTININ A virus (strain A/China:Nanchang/11/1996
Query: 3 TGVVNIPA 10
TG+ NIP+
Sbjct: 332 TGLRNIPS 339
>sp|HEMA_I36A0|HEMAGGLUTININ A virus (strain A/Henry/1936
Query: 3 TGVVNIPA 10
TG+ NIP+
Sbjct: 333 TGLRNIPS 340
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 TGVVNIP 9
TG+ NIP
Sbjct: 845 TGIRNIP 851
>sp|HEMA_I71A3|HEMAGGLUTININ A virus (strain A/Equine/Tokyo/1971
Query: 2 STGVVNIPA 10
+TG+ NIP
Sbjct: 332 ATGMRNIPG 340
>sp|HEMA_I00A1|HEMAGGLUTININ A virus (strain A/New
Query: 3 TGVVNIPA 10
TG+ NIP+
Sbjct: 332 TGLRNIPS 339
>sp|HEMA_I30A0|HEMAGGLUTININ A virus (strain A/Swine/Iowa/15/1930
Query: 3 TGVVNIPA 10
TG+ NIP+
Sbjct: 333 TGLRNIPS 340
>sp|HEMA_I76AI|HEMAGGLUTININ A virus (strain A/Swine/New
Query: 2 STGVVNIPA 10
+TG+ N+P+
Sbjct: 332 ATGLRNVPS 340
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 2 STGVVNIP 9
+TG+VN P
Sbjct: 1243 ATGMVNNP 1250
>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New
Query: 2 STGVVNIP 9
+TG+ N+P
Sbjct: 326 ATGMKNVP 333
>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao
Query: 2 STGVVNIP 9
+TG+ N+P
Sbjct: 326 ATGMKNVP 333
>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973
Query: 2 STGVVNIP 9
+TG+ N+P
Sbjct: 326 ATGMKNVP 333
>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973
Query: 2 STGVVNIP 9
+TG+ N+P
Sbjct: 326 ATGMKNVP 333
>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972
Query: 2 STGVVNIP 9
+TG+ N+P
Sbjct: 326 ATGMKNVP 333
>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966
Query: 2 STGVVNIP 9
+TG+ N+P
Sbjct: 326 ATGMKNVP 333
>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964
Query: 2 STGVVNIP 9
+TG+ N+P
Sbjct: 326 ATGMKNVP 333
>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964
Query: 2 STGVVNIP 9
+TG+ N+P
Sbjct: 326 ATGMKNVP 333
>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963
Query: 2 STGVVNIP 9
+TG+ N+P
Sbjct: 326 ATGMKNVP 333
>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956
Query: 2 STGVVNIP 9
+TG+ N+P
Sbjct: 326 ATGMKNVP 333
>sp|HEMA_I86A0|HEMAGGLUTININ A virus (strain A/Taiwan/1/1986
Query: 3 TGVVNIPA 10
TG+ NIP+
Sbjct: 333 TGLRNIPS 340
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 2 STGVVNIP 9
+TG+ N+P
Sbjct: 326 ATGMKNVP 333
>sp|GN_HHV2H|ENVELOPE glycoprotein N|Human herpesvirus 2 (strain HG52)
Query: 2 STGVVNIP 9
S GVV++P
Sbjct: 46 SAGVVSVP 53
34|Sequence|166|175|VNIPAAECLD
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 2 NIPAAECL 9
N+P ECL
Sbjct: 179 NLPCLECL 186
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 2 NIPAAECLD 10
++P+ +C+D
Sbjct: 322 SVPSTQCVD 330
>sp|UNG_HCMVM|URACIL-DNA glycosylase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PAAECLD 10
PA+ CLD
Sbjct: 132 PASGCLD 138
>sp|UNG_HCMVA|URACIL-DNA glycosylase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PAAECLD 10
PA+ CLD
Sbjct: 132 PASGCLD 138
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 2 NIPAAECL 9
NIP CL
Sbjct: 460 NIPKKSCL 467
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 2 NIPAAECL 9
NIP CL
Sbjct: 459 NIPKKSCL 466
>sp|GH_EBVG|ENVELOPE glycoprotein H|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 NIPAAECLD 10
++PA +C+D
Sbjct: 528 HLPAYKCVD 536
>sp|GH_EBVB9|ENVELOPE glycoprotein H|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 NIPAAECLD 10
++PA +C+D
Sbjct: 528 HLPAYKCVD 536
>sp|GH_EBVA8|ENVELOPE glycoprotein H|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 NIPAAECLD 10
++PA +C+D
Sbjct: 528 HLPAYKCVD 536
>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)
Query: 1 VNIPAAECL 9
++IP EC+
Sbjct: 342 IDIPLVECM 350
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 VNIPAAECL 9
VNI +A CL
Sbjct: 145 VNIGSAGCL 153
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 2 NIPAAECLD 10
N P EC++
Sbjct: 1442 NTPPPECIN 1450
35|Sequence|171|180|AECLDEYEDD
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 2 ECLDEYED 9
+C+DE+ED
Sbjct: 327 QCVDEFED 334
>sp|NEC1_HHV8P|NUCLEAR egress protein 1|Human herpesvirus 8 type P
Query: 2 ECLDEYEDD 10
+C DE DD
Sbjct: 283 DCTDEMRDD 291
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 2 ECLDEY 7
EC+D+Y
Sbjct: 1875 ECMDKY 1880
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 2 ECLDEY 7
EC+D+Y
Sbjct: 1874 ECMDKY 1879
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 2 ECLDEY 7
EC+D+Y
Sbjct: 1876 ECMDKY 1881
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 ECLDEY 7
EC+D+Y
Sbjct: 1874 ECMDKY 1879
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 2 ECLDEY 7
EC+D+Y
Sbjct: 1872 ECMDKY 1877
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 2 ECLDEY 7
EC+D+Y
Sbjct: 1877 ECMDKY 1882
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 ECLDEY 7
EC+D+Y
Sbjct: 1865 ECMDKY 1870
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 2 ECLDEY 7
EC+D+Y
Sbjct: 1865 ECMDKY 1870
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 2 ECLDEY 7
EC+D+Y
Sbjct: 1866 ECMDKY 1871
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 2 ECLDEY 7
EC+D+Y
Sbjct: 1864 ECMDKY 1869
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 ECLDEY 7
EC+D+Y
Sbjct: 1864 ECMDKY 1869
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 2 ECLDEY 7
EC+D+Y
Sbjct: 1866 ECMDKY 1871
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 2 ECLDEY 7
EC+D+Y
Sbjct: 1866 ECMDKY 1871
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 ECLDEY 7
EC+D+Y
Sbjct: 1868 ECMDKY 1873
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 2 ECLDEY 7
EC+D+Y
Sbjct: 1863 ECMDKY 1868
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 2 ECLDEY 7
EC+D+Y
Sbjct: 1882 ECMDKY 1887
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 ECLDEY 7
EC+D+Y
Sbjct: 1884 ECMDKY 1889
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 1 AECLDE 6
+ECLDE
Sbjct: 607 SECLDE 612
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 2 ECLDEYED 9
E L+EYE+
Sbjct: 799 EALEEYEE 806
>sp|PG034_VAR67|PROTEIN OPG034|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 AECLDEYEDD 10
+E ++EY DD
Sbjct: 51 SEIVEEYPDD 60
>sp|VE2_HPV45|REGULATORY protein E2|Human papillomavirus 45
Query: 4 LDEYEDD 10
LD YE+D
Sbjct: 22 LDHYEND 28
>sp|PG021_MONPZ|HOST range factor p28|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 4 LDEYED 9
LD+YED
Sbjct: 158 LDKYED 163
>sp|PG021_MONPV|HOST range factor p28|Monkeypox virus (MPXV)
Query: 4 LDEYED 9
LD+YED
Sbjct: 158 LDKYED 163
>sp|PG021_CWPXG|HOST range factor p28|Cowpox virus (strain GRI-90 /
Query: 4 LDEYED 9
LD+YED
Sbjct: 158 LDKYED 163
>sp|PG034_VACCC|PROTEIN OPG034|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 AECLDEYEDD 10
+E ++EY DD
Sbjct: 63 SEIVEEYPDD 72
>sp|PG021_VACC8|HOST range factor p28|Vaccinia virus (strain LC16m8) (VACV)
Query: 4 LDEYED 9
LD+YED
Sbjct: 155 LDKYED 160
>sp|PG021_VACC0|HOST range factor p28|Vaccinia virus (strain LC16m0) (VACV)
Query: 4 LDEYED 9
LD+YED
Sbjct: 155 LDKYED 160
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 3 CLDEYED 9
C D YE+
Sbjct: 1336 CCDRYEE 1342
>sp|CEP1_HHV8P|CYTOPLASMIC envelopment protein 1|Human herpesvirus 8 type P
Query: 3 CLDEYED 9
CL E+ED
Sbjct: 90 CLVEHED 96
>sp|PG034_MONPV|PROTEIN OPG034|Monkeypox virus (MPXV)
Query: 1 AECLDEYEDD 10
+E ++EY DD
Sbjct: 51 SEIVEEYPDD 60
>sp|PG021_VAR67|HOST range factor p28|Variola virus (isolate Human/India/Ind3/1967)
Query: 4 LDEYED 9
LD+YED
Sbjct: 158 LDKYED 163
>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)
Query: 5 DEYEDD 10
D+YE+D
Sbjct: 335 DDYEED 340
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 1 AECLDEYE 8
+ CL+E+E
Sbjct: 803 SHCLEEFE 810
>sp|SHUT_HHV2H|VIRION host shutoff protein|Human herpesvirus 2 (strain HG52)
Query: 5 DEYEDD 10
D+YE+D
Sbjct: 335 DDYEED 340
>sp|SHUT_HHV2G|VIRION host shutoff protein|Human herpesvirus 2 (strain G)
Query: 5 DEYEDD 10
D+YE+D
Sbjct: 335 DDYEED 340
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 1 AECLDEYE 8
+ CL+E+E
Sbjct: 803 SHCLEEFE 810
>sp|NP03_VZVO|NUCLEAR phosphoprotein UL3 homolog|Varicella-zoster virus (strain Oka
Query: 1 AECLDEYEDD 10
A C+++ +DD
Sbjct: 59 AGCIEKTKDD 68
>sp|NP03_VZVD|NUCLEAR phosphoprotein UL3 homolog|Varicella-zoster virus (strain Dumas)
Query: 1 AECLDEYEDD 10
A C+++ +DD
Sbjct: 59 AGCIEKTKDD 68
>sp|NCAP_EBORR|NUCLEOPROTEIN ebolavirus (strain Reston-89) (REBOV)
Query: 4 LDEYEDD 10
LD++EDD
Sbjct: 488 LDDHEDD 494
36|Sequence|176|185|EYEDDEAGQK
>sp|TEG1_HHV1F|TEGUMENT protein UL46|Human herpesvirus 1 (strain F)
Query: 2 YEDDEA 7
YEDDE+
Sbjct: 604 YEDDES 609
>sp|TEG1_HHV11|TEGUMENT protein UL46|Human herpesvirus 1 (strain 17)
Query: 2 YEDDEA 7
YEDDE+
Sbjct: 606 YEDDES 611
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 1 EYEDDEAGQK 10
E +DDE G K
Sbjct: 310 EMKDDEVGGK 319
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 2 YEDDE 6
YEDDE
Sbjct: 1008 YEDDE 1012
>sp|GL_HHV1K|ENVELOPE glycoprotein L|Human herpesvirus 1 (strain KOS)
Query: 4 DDEAG 8
DDEAG
Sbjct: 182 DDEAG 186
>sp|GL_HHV11|ENVELOPE glycoprotein L|Human herpesvirus 1 (strain 17)
Query: 4 DDEAG 8
DDEAG
Sbjct: 182 DDEAG 186
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 5 DEAGQK 10
D+AGQK
Sbjct: 2506 DKAGQK 2511
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 5 DEAGQK 10
D+AGQK
Sbjct: 2483 DKAGQK 2488
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 DEAGQK 10
D+AGQK
Sbjct: 2506 DKAGQK 2511
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 DEAGQK 10
D+AGQK
Sbjct: 2483 DKAGQK 2488
>sp|NCAP_EBORE|NUCLEOPROTEIN ebolavirus (strain Philippines-96) (REBOV)
Query: 2 YEDDEAG 8
Y DDE G
Sbjct: 472 YHDDEVG 478
>sp|NCAP_EBORR|NUCLEOPROTEIN ebolavirus (strain Reston-89) (REBOV)
Query: 2 YEDDEAG 8
Y DDE G
Sbjct: 472 YHDDEVG 478
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 EYEDDEA 7
EY DDE+
Sbjct: 717 EYYDDES 723
>sp|RDRP_DHVI1|RNA-DIRECTED RNA polymerase catalytic subunit|Dhori virus (strain
Query: 1 EYEDDEAG 8
EY+D E G
Sbjct: 191 EYDDGETG 198
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 1 EYEDDEAG 8
EY+DD G
Sbjct: 2067 EYKDDTRG 2074
37|Sequence|181|190|EAGQKERKRE
>sp|CEP2_VZVD|CYTOPLASMIC envelopment protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 EAGQKERKRE 10
+AGQ+E K E
Sbjct: 262 KAGQRELKVE 271
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 GQKERK 8
GQKERK
Sbjct: 1319 GQKERK 1324
38|Sequence|186|195|ERKREDAITQ
>sp|UL92_HHV6Z|PROTEIN U63|Human herpesvirus 6B (strain Z29)
Query: 2 RKREDAITQ 10
RKRED++ +
Sbjct: 198 RKREDSLLK 206
>sp|UL92_HHV6U|PROTEIN U63|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 RKREDAITQ 10
RKRED++ +
Sbjct: 196 RKREDSLLK 204
>sp|UL92_HCMVM|UNCHARACTERIZED protein UL92|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 RKREDAITQ 10
+KREDA+ +
Sbjct: 177 KKREDALLK 185
>sp|UL92_HCMVA|PROTEIN UL92|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RKREDAITQ 10
+KREDA+ +
Sbjct: 177 KKREDALLK 185
>sp|CEP1_HCMVM|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain Merlin)
Query: 5 EDAITQ 10
EDA+TQ
Sbjct: 75 EDAVTQ 80
>sp|CEP1_HCMVA|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain AD169)
Query: 5 EDAITQ 10
EDA+TQ
Sbjct: 75 EDAVTQ 80
39|Sequence|191|200|DAITQQNTIQ
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 DAITQQNTIQ 10
DAI Q+N Q
Sbjct: 326 DAIYQENPAQ 335
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 1 DAITQQNT 8
DAI Q+N+
Sbjct: 429 DAICQENS 436
40|Sequence|196|205|QNTIQNEAVN
>sp|US9_VZVO|ENVELOPE protein US9|Varicella-zoster virus (strain Oka vaccine)
Query: 1 QNTIQNEAV 9
QNT++ EAV
Sbjct: 4 QNTMEGEAV 12
>sp|US9_VZVD|ENVELOPE protein US9|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 QNTIQNEAV 9
QNT++ EAV
Sbjct: 4 QNTMEGEAV 12
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 QNTIQN 6
QNT+QN
Sbjct: 2010 QNTLQN 2015
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 1 QNTIQN 6
QNT+QN
Sbjct: 730 QNTLQN 735
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 QNTIQN 6
QNT+QN
Sbjct: 2061 QNTLQN 2066
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 QNTIQN 6
QNT+QN
Sbjct: 2048 QNTLQN 2053
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 QNTIQN 6
QNT+QN
Sbjct: 2055 QNTLQN 2060
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 QNTIQN 6
QNT+QN
Sbjct: 2048 QNTLQN 2053
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 QNTIQN 6
QNT+QN
Sbjct: 2018 QNTLQN 2023
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 QNTIQN 6
QNT+QN
Sbjct: 2077 QNTLQN 2082
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 QNTIQN 6
QNT+QN
Sbjct: 1992 QNTLQN 1997
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 QNTIQN 6
QNT+QN
Sbjct: 2083 QNTLQN 2088
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 QNTIQN 6
QNT+QN
Sbjct: 2051 QNTLQN 2056
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 QNTIQN 6
QNT+QN
Sbjct: 2077 QNTLQN 2082
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 QNTIQN 6
QNT+QN
Sbjct: 2069 QNTLQN 2074
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 QNTIQN 6
QNT+QN
Sbjct: 2058 QNTLQN 2063
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 QNTIQN 6
QNT+QN
Sbjct: 2055 QNTLQN 2060
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 QNTIQN 6
QNT+QN
Sbjct: 2055 QNTLQN 2060
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 QNTIQN 6
QNT+QN
Sbjct: 2078 QNTLQN 2083
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 QNTIQN 6
QNT+QN
Sbjct: 2094 QNTLQN 2099
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 QNTIQN 6
QNT+QN
Sbjct: 2094 QNTLQN 2099
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 QNTIQN 6
QNT+QN
Sbjct: 2095 QNTLQN 2100
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 QNTIQN 6
QNT+QN
Sbjct: 2094 QNTLQN 2099
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 QNTIQN 6
QNT+QN
Sbjct: 2096 QNTLQN 2101
41|Sequence|201|210|NEAVNLLDPG
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 NEAVNLLD 8
N A+NLLD
Sbjct: 809 NSAINLLD 816
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 NEAVNLLD 8
N A+NLLD
Sbjct: 802 NSAINLLD 809
>sp|UL132_HCMVT|ENVELOPE glycoprotein UL132|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 EAVNLLD 8
EAVNLLD
Sbjct: 122 EAVNLLD 128
>sp|UL132_HCMVA|ENVELOPE glycoprotein UL132|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 EAVNLLD 8
EAVNLLD
Sbjct: 122 EAVNLLD 128
>sp|UL132_HCMVM|ENVELOPE glycoprotein UL132|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 EAVNLLD 8
EAVNLLD
Sbjct: 122 EAVNLLD 128
>sp|NTP1_VARV|NUCLEOSIDE triphosphatase I|Variola virus
Query: 4 VNLLDPG 10
VNLL PG
Sbjct: 198 VNLLRPG 204
>sp|NTP1_VAR67|NUCLEOSIDE triphosphatase I|Variola virus (isolate Human/India/Ind3/1967)
Query: 4 VNLLDPG 10
VNLL PG
Sbjct: 198 VNLLRPG 204
>sp|NTP1_VACCC|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 VNLLDPG 10
VNLL PG
Sbjct: 198 VNLLRPG 204
>sp|NTP1_VACCA|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Ankara) (VACV)
Query: 4 VNLLDPG 10
VNLL PG
Sbjct: 198 VNLLRPG 204
>sp|NTP1_MONPV|NUCLEOSIDE triphosphatase I|Monkeypox virus (MPXV)
Query: 4 VNLLDPG 10
VNLL PG
Sbjct: 198 VNLLRPG 204
>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1
Query: 4 VNLLDPG 10
VNLL PG
Sbjct: 197 VNLLRPG 203
>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)
Query: 2 EAVNLLDP 9
E++NL DP
Sbjct: 326 ESLNLTDP 333
>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)
Query: 2 EAVNLLDP 9
E++NL DP
Sbjct: 326 ESLNLTDP 333
>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 EAVNLLDP 9
E++NL DP
Sbjct: 326 ESLNLTDP 333
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 3 AVNLLDPG 10
A+N L+PG
Sbjct: 1260 ALNCLNPG 1267
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 3 AVNLLDPG 10
A+N L+PG
Sbjct: 1260 ALNCLNPG 1267
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 NEAVNLLDPG 10
N +VN LD G
Sbjct: 146 NCSVNTLDAG 155
>sp|NCAP_JUNIN|NUCLEOPROTEIN mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 2 EAVNLLDP 9
EAV LDP
Sbjct: 366 EAVGKLDP 373
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 AVNLLDPG 10
AVN ++PG
Sbjct: 745 AVNNMEPG 752
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 2 EAVNLLD 8
EA++LLD
Sbjct: 722 EAISLLD 728
>sp|NCAP_MACHU|NUCLEOPROTEIN virus (MACV)
Query: 2 EAVNLLDP 9
EAV LDP
Sbjct: 366 EAVKKLDP 373
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 2 EAVNLLD 8
EA++LLD
Sbjct: 788 EAISLLD 794
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 2 EAVNLLD 8
EA++LLD
Sbjct: 788 EAISLLD 794
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 2 EAVNLLD 8
EA++LLD
Sbjct: 788 EAISLLD 794
42|Sequence|206|215|LLDPGSSYLL
>sp|NSP4_ROTHW|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain RVA/Human/United
Query: 3 DPGSSYLL 10
DPG +Y L
Sbjct: 27 DPGMAYFL 34
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 DPGSSYLL 10
DP SYLL
Sbjct: 1744 DPAKSYLL 1751
>sp|CAPSD_HASV8|CAPSID polyprotein VP90|Human astrovirus-8 (HAstV-8)
Query: 2 LDPGSSYLL 10
+DPG YL+
Sbjct: 619 VDPGMMYLI 627
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 LDPGSSYL 9
+DPGS+ L
Sbjct: 55 IDPGSTIL 62
>sp|RP19_VAR67|DNA-DIRECTED RNA polymerase 19 kDa|Variola virus (isolate
Query: 2 LDPGSSY 8
+DP SSY
Sbjct: 36 IDPKSSY 42
>sp|RP19_VACCC|DNA-DIRECTED RNA polymerase 19 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 LDPGSSY 8
+DP SSY
Sbjct: 36 IDPKSSY 42
>sp|RP19_VACCA|DNA-DIRECTED RNA polymerase 19 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 LDPGSSY 8
+DP SSY
Sbjct: 36 IDPKSSY 42
>sp|RP19_MONPV|DNA-DIRECTED RNA polymerase 19 kDa|Monkeypox virus (MPXV)
Query: 2 LDPGSSY 8
+DP SSY
Sbjct: 33 IDPKSSY 39
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 LDPGSSYL 9
+DP ++YL
Sbjct: 3929 VDPATTYL 3936
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 LLDPGSSY 8
+LDPG Y
Sbjct: 1 MLDPGEVY 8
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 2 LDPGSSYL 9
+DP ++YL
Sbjct: 3929 VDPATTYL 3936
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 LLDPGSSY 8
+LDPG Y
Sbjct: 1 MLDPGEVY 8
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 LLDPGSSY 8
+LDPG Y
Sbjct: 1 MLDPGEVY 8
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 LLDPGSSY 8
+LDPG Y
Sbjct: 1 MLDPGEVY 8
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 LLDPGSSY 8
+LDPG Y
Sbjct: 1 MLDPGEVY 8
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 LLDPGSSY 8
+LDPG Y
Sbjct: 1 MLDPGEVY 8
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 LLDPGSSY 8
+LDPG Y
Sbjct: 1 MLDPGEVY 8
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 LLDPGSSY 8
+LDPG Y
Sbjct: 1 MLDPGEVY 8
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 LLDPGSSY 8
+LDPG Y
Sbjct: 1 MLDPGEVY 8
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 LDPGSSYL 9
+DP ++YL
Sbjct: 3954 VDPAAAYL 3961
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 LDPGSSYL 9
+DP ++YL
Sbjct: 3954 VDPAAAYL 3961
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 3 DPGSS 7
DPGSS
Sbjct: 1202 DPGSS 1206
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 3 DPGSS 7
DPGSS
Sbjct: 1201 DPGSS 1205
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 3 DPGSS 7
DPGSS
Sbjct: 1201 DPGSS 1205
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 2 LDPGSSYL 9
L PG SY
Sbjct: 416 LSPGRSYF 423
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 2 LDPGSSYL 9
L PG SY
Sbjct: 416 LSPGRSYF 423
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 2 LDPGSSYL 9
L PG SY
Sbjct: 416 LSPGRSYF 423
>sp|PG145_MONPV|TRANSCRIPT termination protein OPG145|Monkeypox virus (MPXV)
Query: 2 LDPGSSY 8
++PGSS+
Sbjct: 35 VEPGSSF 41
>sp|A18_VACCA|TRANSCRIPT termination protein A18|Vaccinia virus (strain Ankara) (VACV)
Query: 2 LDPGSSY 8
++PGSS+
Sbjct: 35 VEPGSSF 41
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 LDPGSSYL 9
L PG++YL
Sbjct: 783 LVPGATYL 790
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 LDPGSSYL 9
L PG++YL
Sbjct: 783 LVPGATYL 790
>sp|A18_CWPXG|TRANSCRIPT termination protein A18|Cowpox virus (strain GRI-90 /
Query: 2 LDPGSSY 8
++PGSS+
Sbjct: 35 VEPGSSF 41
>sp|PG145_VACCC|TRANSCRIPT termination protein OPG145|Vaccinia virus (strain Copenhagen)
Query: 2 LDPGSSY 8
++PGSS+
Sbjct: 35 VEPGSSF 41
>sp|A18_VACCT|TRANSCRIPT termination protein A18|Vaccinia virus (strain Tian Tan)
Query: 2 LDPGSSY 8
++PGSS+
Sbjct: 35 VEPGSSF 41
>sp|A18_CWPXB|TRANSCRIPT termination protein A18|Cowpox virus (strain Brighton Red)
Query: 2 LDPGSSY 8
++PGSS+
Sbjct: 35 VEPGSSF 41
43|Sequence|211|220|SSYLLQEPPR
>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human
Query: 1 SSYLLQEPPR 10
+SY+L EPP+
Sbjct: 264 ASYILSEPPK 273
>sp|VE1_HPV63|REPLICATION protein E1|Human papillomavirus type 63
Query: 1 SSYLLQEPPR 10
S+Y++ EPP+
Sbjct: 270 SNYIMAEPPK 279
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 3 YLLQEPPR 10
Y+L EPPR
Sbjct: 302 YMLIEPPR 309
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 SSYLLQE 7
S+YLL+E
Sbjct: 94 SNYLLEE 100
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 SSYLLQE 7
S+YLL+E
Sbjct: 94 SNYLLEE 100
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 2 SYLLQEPP 9
+YLL PP
Sbjct: 112 TYLLGRPP 119
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 2 SYLLQEPP 9
+YLL PP
Sbjct: 112 TYLLGRPP 119
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 2 SYLLQEPP 9
+YLL PP
Sbjct: 112 TYLLGRPP 119
44|Sequence|216|225|QEPPRTVSGR
>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QEPPRT 6
Q PPRT
Sbjct: 386 QTPPRT 391
>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 QEPPRT 6
Q PPRT
Sbjct: 386 QTPPRT 391
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QEPPRT 6
Q PPRT
Sbjct: 387 QTPPRT 392
>sp|ETF1_MCV1|EARLY transcription factor 70 kDa|Molluscum contagiosum virus subtype 1
Query: 4 PRTVSGR 10
P+T+ GR
Sbjct: 375 PKTIGGR 381
>sp|VL2_HPV60|MINOR capsid protein L2|Human papillomavirus type 60
Query: 1 QEPPRT 6
+EPPRT
Sbjct: 252 EEPPRT 257
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 QEPPRTVSGR 10
PP T SGR
Sbjct: 724 NNPPPTYSGR 733
>sp|VCP_VACCC|COMPLEMENT control protein C3|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 QEPPRTVSGR 10
Q PP +GR
Sbjct: 149 QSPPSISNGR 158
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 3 PPRTVS 8
PPRTV+
Sbjct: 78 PPRTVA 83
>sp|UL91_HCMVA|PROTEIN UL91|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PRTVSG 9
P+TVSG
Sbjct: 93 PKTVSG 98
45|Sequence|221|230|TVSGRYKSTT
>sp|SPIKE_ADE08|FIBER protein|Human adenovirus D serotype 8
Query: 2 VSGRYK 7
V+GRYK
Sbjct: 222 VAGRYK 227
46|Sequence|226|235|YKSTTSVSEE
>sp|RP35_MONPV|DNA-DIRECTED RNA polymerase 35 kDa|Monkeypox virus (MPXV)
Query: 1 YKSTTSVSEE 10
Y ++T+V+EE
Sbjct: 42 YNTSTAVNEE 51
47|Sequence|231|240|SVSEEDVSSR
***** No hits found ******
48|Sequence|236|245|DVSSRYSRTD
>sp|VE2_HPV21|REGULATORY protein E2|Human papillomavirus 21
Query: 1 DVSSRYSRT 9
D +SRYSRT
Sbjct: 174 DDASRYSRT 182
>sp|US14_HCMVA|UNCHARACTERIZED protein HVLF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 VSSRYSRT 9
+SSRYS T
Sbjct: 40 ISSRYSET 47
>sp|US14_HCMVM|MEMBRANE protein US14|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 VSSRYSRT 9
+SSRYS T
Sbjct: 40 ISSRYSET 47
>sp|HEMA_I06A0|HEMAGGLUTININ A virus (strain A/Russia:St.Petersburg/8/2006
Query: 2 VSSRYSR 8
VSS YSR
Sbjct: 218 VSSHYSR 224
>sp|HEMA_I00A1|HEMAGGLUTININ A virus (strain A/New
Query: 2 VSSRYSR 8
VSS YSR
Sbjct: 218 VSSHYSR 224
>sp|HEMA_I96A3|HEMAGGLUTININ A virus (strain A/China:Nanchang/11/1996
Query: 2 VSSRYSR 8
VSS YSR
Sbjct: 218 VSSHYSR 224
>sp|HEMA_I07A0|HEMAGGLUTININ A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 VSSRYSR 8
VSS YSR
Sbjct: 218 VSSHYSR 224
>sp|UL20_HHV2H|PROTEIN UL20|Human herpesvirus 2 (strain HG52)
Query: 2 VSSRYSR 8
VSS YSR
Sbjct: 45 VSSAYSR 51
>sp|UL20_HHV11|PROTEIN UL20|Human herpesvirus 1 (strain 17)
Query: 2 VSSRYSR 8
VSS YSR
Sbjct: 45 VSSAYSR 51
>sp|HEMA_I96A2|HEMAGGLUTININ A virus (strain A/USA:Memphis/10/1996
Query: 2 VSSRYSR 8
VSS YSR
Sbjct: 219 VSSHYSR 225
49|Sequence|241|250|YSRTDRSGFP
>sp|SPIKE_ADE1P|FIBER protein|Human adenovirus B serotype 11
Query: 1 YSRTDRSGFP 10
Y+ +DR+ FP
Sbjct: 261 YTASDRTAFP 270
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 TDRSGFP 10
TDRSG P
Sbjct: 519 TDRSGVP 525
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 1 YSRTDRSGFP 10
Y RT+ FP
Sbjct: 472 YQRTEEETFP 481
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 4 TDRSGFP 10
TDRSG P
Sbjct: 519 TDRSGAP 525
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 TDRSGFP 10
TDRSG P
Sbjct: 519 TDRSGAP 525
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 4 TDRSGFP 10
TDRSG P
Sbjct: 519 TDRSGAP 525
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 TDRSGFP 10
TDRSG P
Sbjct: 519 TDRSGAP 525
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 3 RTDRSGFP 10
R D+ GFP
Sbjct: 533 RADQDGFP 540
>sp|HEMA_I85A3|HEMAGGLUTININ A virus (strain A/Chicken/Victoria/1/1985
Query: 2 SRTDRSGFP 10
S TD + FP
Sbjct: 163 SNTDNAAFP 171
>sp|HEMA_I85A6|HEMAGGLUTININ A virus (strain A/Starling/Victoria/5156/1985
Query: 2 SRTDRSGFP 10
S TD + FP
Sbjct: 163 SNTDNAAFP 171
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 4 TDRSGFP 10
TDRSG P
Sbjct: 519 TDRSGAP 525
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 4 TDRSGFP 10
TDR+G P
Sbjct: 519 TDRAGVP 525
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 3 RTDRSGFP 10
R D +GFP
Sbjct: 402 RADANGFP 409
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 4 TDRSGFP 10
TDR G P
Sbjct: 519 TDRKGLP 525
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 3 RTDRSGFP 10
R D GFP
Sbjct: 529 RADERGFP 536
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 2 SRTDRSGFP 10
S TD + FP
Sbjct: 163 SDTDNAAFP 171
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 4 TDRSGFP 10
TDR G P
Sbjct: 521 TDRQGVP 527
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 5 DRSGFP 10
+RSG+P
Sbjct: 716 ERSGYP 721
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 5 DRSGFP 10
+RSG+P
Sbjct: 716 ERSGYP 721
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 5 DRSGFP 10
+RSG+P
Sbjct: 717 ERSGYP 722
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 4 TDRSGFP 10
TDR+G P
Sbjct: 521 TDRAGAP 527
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 5 DRSGFP 10
+RSG+P
Sbjct: 716 ERSGYP 721
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 4 TDRSGFP 10
TDR G P
Sbjct: 521 TDRQGVP 527
>sp|NRAM_I33A0|NEURAMINIDASE A virus (strain A/Wilson-Smith/1933
Query: 2 SRTDRSGF 9
+ TDRSG+
Sbjct: 379 AMTDRSGY 386
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 5 DRSGFP 10
+RSG+P
Sbjct: 716 ERSGYP 721
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 5 DRSGFP 10
+RSG+P
Sbjct: 716 ERSGYP 721
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 5 DRSGFP 10
+RSG+P
Sbjct: 717 ERSGYP 722
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 5 DRSGFP 10
+RSG+P
Sbjct: 716 ERSGYP 721
50|Sequence|246|255|RSGFPRYNRD
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 RSGFPR 6
RSGFPR
Sbjct: 2278 RSGFPR 2283
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 2 SGFPRYN 8
SG PRYN
Sbjct: 602 SGVPRYN 608
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 RSGFPRY 7
+SGFPR+
Sbjct: 728 KSGFPRF 734
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 SGFPRYNRD 10
SGF R+ RD
Sbjct: 1040 SGFERWKRD 1048
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 SGFPRYNRD 10
SGF R+ RD
Sbjct: 1038 SGFERWKRD 1046
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 2 SGFPRYNRD 10
SGF R+ RD
Sbjct: 1037 SGFERWKRD 1045
>sp|VME1_SARS|MEMBRANE protein|Severe acute respiratory syndrome coronavirus
Query: 2 SGFPRYNR 9
SGF YNR
Sbjct: 190 SGFAAYNR 197
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 RSGFPRYN 8
RSG P YN
Sbjct: 521 RSGAPTYN 528
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 RSGFPRYN 8
RSG P YN
Sbjct: 521 RSGAPTYN 528
>sp|CEP2_HHV6U|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 GF-PRYNRD 10
GF PRYN D
Sbjct: 116 GFIPRYNSD 124
>sp|IR12_HCMVA|UNCHARACTERIZED protein IRL12|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 PRYNRD 10
PRYN D
Sbjct: 332 PRYNTD 337
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 RSGFPRYN 8
R+G P YN
Sbjct: 523 RAGAPTYN 530
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 RSGFPRYN 8
R G P YN
Sbjct: 523 RQGVPTYN 530
>sp|VL1_HPV70|MAJOR capsid protein L1|Human papillomavirus type 70
Query: 2 SGFPRYNR 9
SG P YNR
Sbjct: 118 SGHPLYNR 125
>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68
Query: 2 SGFPRYNR 9
SG P YNR
Sbjct: 118 SGHPLYNR 125
>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180
Query: 2 SGFPRYNR 9
SG P YNR
Sbjct: 118 SGHPLYNR 125
>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39
Query: 2 SGFPRYNR 9
SG P YNR
Sbjct: 118 SGHPLYNR 125
>sp|VL1_HPV62|MAJOR capsid protein L1|Human papillomavirus 62
Query: 2 SGFPRYNR 9
SG P YNR
Sbjct: 118 SGHPLYNR 125
>sp|VL1_HPV61|MAJOR capsid protein L1|Human papillomavirus type 61
Query: 2 SGFPRYNR 9
SG P YNR
Sbjct: 120 SGHPLYNR 127
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 2 SGFPRYNR 9
SG P YNR
Sbjct: 227 SGHPYYNR 234
>sp|NEC2_HHV8P|NUCLEAR egress protein 2|Human herpesvirus 8 type P
Query: 2 SGFPRYNRD 10
+GFP RD
Sbjct: 201 AGFPTNGRD 209
>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain
Query: 2 SGFPRYNR 9
SG P YN+
Sbjct: 316 SGTPSYNK 323
>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a
Query: 2 SGFPRYNR 9
SG P YNR
Sbjct: 133 SGHPYYNR 140
>sp|CEP2_HHV6Z|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6B (strain Z29)
Query: 2 SGFPRYNRD 10
S P+YN D
Sbjct: 116 SFIPKYNSD 124
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 2 SGFPRYNRD 10
SG P +N+D
Sbjct: 116 SGHPYFNKD 124
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 RSGFPRYN 8
RSG P Y+
Sbjct: 521 RSGVPTYS 528
>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40
Query: 2 SGFPRYNRD 10
SG P +N+D
Sbjct: 116 SGHPYFNKD 124
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 SGFPRYN 8
+G P YN
Sbjct: 2506 TGIPEYN 2512
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 SGFPRYN 8
+G P YN
Sbjct: 2506 TGIPEYN 2512
>sp|GLYCP_HENDH|GLYCOPROTEIN G|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 RSGFPRYN 8
RSG +YN
Sbjct: 410 RSGLLKYN 417
>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29
Query: 2 SGFPRYNR 9
SG P YN+
Sbjct: 118 SGHPLYNK 125
>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3
Query: 2 SGFPRYNR 9
SG P YN+
Sbjct: 146 SGHPLYNK 153
>sp|VME1_SARS2|MEMBRANE protein|Severe acute respiratory syndrome coronavirus
Query: 2 SGFPRYNR 9
SGF Y+R
Sbjct: 191 SGFAAYSR 198
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 RSGFPRYN 8
RSG P Y+
Sbjct: 521 RSGAPTYS 528
>sp|PG143_VAR67|VIRION membrane protein OPG143|Variola virus (isolate
Query: 4 FPRYNR 9
+P+YNR
Sbjct: 30 YPKYNR 35
>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28
Query: 2 SGFPRYNR 9
SG P YN+
Sbjct: 118 SGHPLYNK 125
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 RSGFPRYN 8
RSG P Y+
Sbjct: 521 RSGAPTYS 528
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 RSGFPRYN 8
R G P YN
Sbjct: 522 RRGCPTYN 529
>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10
Query: 2 SGFPRYNR 9
SG P YN+
Sbjct: 146 SGHPLYNK 153
>sp|GLYCP_NIPAV|GLYCOPROTEIN G|Nipah virus
Query: 1 RSGFPRYN 8
RSG +YN
Sbjct: 410 RSGLLKYN 417
>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57
Query: 2 SGFPRYNR 9
SG P YN+
Sbjct: 134 SGHPYYNK 141
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 1 RSGFP 5
RSG+P
Sbjct: 717 RSGYP 721
>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56
Query: 2 SGFPRYNR 9
SG P +NR
Sbjct: 152 SGHPLFNR 159
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 1 RSGFP 5
RSG+P
Sbjct: 718 RSGYP 722
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 1 RSGFP 5
RSG+P
Sbjct: 717 RSGYP 721
>sp|VL1_HPV53|MAJOR capsid protein L1|Human papillomavirus type 53
Query: 2 SGFPRYNR 9
SG P +NR
Sbjct: 116 SGHPLFNR 123
51|Sequence|251|260|RYNRDANVSG
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 1 RYNRDANVSG 10
++NRD NV G
Sbjct: 94 QWNRDINVFG 103
>sp|VP24_MABVP|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 RYNRDANVS 9
RYN ANV+
Sbjct: 7 RYNLPANVT 15
>sp|VP24_MABVO|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 RYNRDANVS 9
RYN ANV+
Sbjct: 7 RYNLPANVT 15
>sp|VP24_MABVM|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 RYNRDANVS 9
RYN ANV+
Sbjct: 7 RYNLPANVT 15
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 RYNRDANVS 9
RY+ +ANVS
Sbjct: 114 RYSVNANVS 122
>sp|PG015_MONPV|ANKYRIN repeat domain-containing protein OPG015|Monkeypox virus (MPXV)
Query: 2 YNRDAN 7
YNRD N
Sbjct: 357 YNRDKN 362
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 RYNRDANVS 9
RY D N+S
Sbjct: 2760 RYEEDVNLS 2768
>sp|PG045_VACCA|APOPTOSIS regulator OPG045|Vaccinia virus (strain Ankara) (VACV)
Query: 2 YNRDANV 8
YNRD N+
Sbjct: 104 YNRDMNI 110
>sp|PG045_VARV|APOPTOSIS regulator OPG045|Variola virus
Query: 2 YNRDANV 8
YNRD N+
Sbjct: 119 YNRDMNI 125
>sp|PG045_VACCC|APOPTOSIS regulator OPG045|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 YNRDANV 8
YNRD N+
Sbjct: 108 YNRDMNI 114
>sp|PG045_VACCT|APOPTOSIS regulator OPG045|Vaccinia virus (strain Tian Tan)
Query: 2 YNRDANV 8
YNRD N+
Sbjct: 108 YNRDMNI 114
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 YNRDANVSG 10
YN+DA+ G
Sbjct: 4104 YNKDASFIG 4112
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 RYNRDANV 8
RY +D N+
Sbjct: 2775 RYEKDVNL 2782
>sp|PG045_VACCP|APOPTOSIS regulator OPG045|Vaccinia virus (strain L-IVP) (VACV)
Query: 2 YNRDANV 8
YNRD N+
Sbjct: 108 YNRDMNI 114
52|Sequence|256|265|ANVSGTLVSS
>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b
Query: 3 VSGTLVSS 10
VSG+LVSS
Sbjct: 316 VSGSLVSS 323
>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47
Query: 3 VSGTLVSS 10
VSG+LVSS
Sbjct: 305 VSGSLVSS 312
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 3 VSGTLVSS 10
VSG+LVSS
Sbjct: 307 VSGSLVSS 314
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 3 VSGTLVSS 10
VSG+LVSS
Sbjct: 308 VSGSLVSS 315
>sp|VL1_HPV24|MAJOR capsid protein L1|Human papillomavirus 24
Query: 3 VSGTLVSS 10
VSG+LVSS
Sbjct: 309 VSGSLVSS 316
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 3 VSGTLVSS 10
VSG+LVSS
Sbjct: 309 VSGSLVSS 316
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 3 VSGTLVSS 10
VSG+LVSS
Sbjct: 307 VSGSLVSS 314
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 3 VSGTLVSS 10
VSG+LVSS
Sbjct: 309 VSGSLVSS 316
>sp|VL1_HPV12|MAJOR capsid protein L1|Human papillomavirus 12
Query: 3 VSGTLVSS 10
VSG+LVSS
Sbjct: 307 VSGSLVSS 314
>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8
Query: 3 VSGTLVSS 10
VSG+LVSS
Sbjct: 306 VSGSLVSS 313
>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5
Query: 3 VSGTLVSS 10
VSG+LVSS
Sbjct: 307 VSGSLVSS 314
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 3 VSGTLVSS 10
VSG+LVSS
Sbjct: 337 VSGSLVSS 344
>sp|VL1_HPV49|MAJOR capsid protein L1|Human papillomavirus type 49
Query: 3 VSGTLVSS 10
VSG+LVS+
Sbjct: 305 VSGSLVST 312
>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65
Query: 4 SGTLVSS 10
SG+LVSS
Sbjct: 305 SGSLVSS 311
>sp|VL1_HPV63|MAJOR capsid protein L1|Human papillomavirus type 63
Query: 4 SGTLVSS 10
SG+LVSS
Sbjct: 301 SGSLVSS 307
>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4
Query: 4 SGTLVSS 10
SG+LVSS
Sbjct: 305 SGSLVSS 311
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 ANVSGTLVSS 10
+ VSG +VSS
Sbjct: 2709 SGVSGNIVSS 2718
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 ANVSGTLVSS 10
+ VSG +VSS
Sbjct: 2709 SGVSGNIVSS 2718
>sp|VL1_HPV55|MAJOR capsid protein L1|Human papillomavirus type 55
Query: 4 SGTLVSS 10
SG+LVSS
Sbjct: 292 SGSLVSS 298
>sp|VL1_HPV44|MAJOR capsid protein L1|Human papillomavirus 44
Query: 4 SGTLVSS 10
SG+LVSS
Sbjct: 292 SGSLVSS 298
>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13
Query: 4 SGTLVSS 10
SG+LVSS
Sbjct: 290 SGSLVSS 296
>sp|MC007_MCV1|PROTEIN MC007|Molluscum contagiosum virus subtype 1
Query: 1 ANVSGTLVSS 10
A V+G LVSS
Sbjct: 31 AFVAGALVSS 40
>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)
Query: 4 SGTLVS 9
SGTLVS
Sbjct: 122 SGTLVS 127
>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11
Query: 4 SGTLVSS 10
SG+LVSS
Sbjct: 293 SGSLVSS 299
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ANVSGTLVSS 10
AN++GT V+S
Sbjct: 133 ANLNGTNVTS 142
>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b
Query: 4 SGTLVSS 10
SG+LVSS
Sbjct: 292 SGSLVSS 298
>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a
Query: 4 SGTLVSS 10
SG+LVSS
Sbjct: 292 SGSLVSS 298
53|Sequence|261|270|TLVSSSTLEK
>sp|VE2_HPV6B|REGULATORY protein E2|Human papillomavirus type 6b
Query: 1 TLVSSSTLE 9
TLVSSST E
Sbjct: 221 TLVSSSTKE 229
54|Sequence|266|275|STLEKKIEDL
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 1 STLEKKIEDL 10
STLEK++ D+
Sbjct: 976 STLEKRLNDI 985
>sp|HEMA_I67A2|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 STLEKKIEDL 10
+ LEK+IE+L
Sbjct: 415 NNLEKRIENL 424
>sp|HEMA_I61A1|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 STLEKKIEDL 10
+ LEK+IE+L
Sbjct: 415 NNLEKRIENL 424
>sp|HEMA_I76AI|HEMAGGLUTININ A virus (strain A/Swine/New
Query: 3 LEKKIEDL 10
LEK+IE+L
Sbjct: 417 LEKRIENL 424
>sp|HEMA_I88A6|HEMAGGLUTININ A virus (strain A/Swine/Indiana/1726/1988
Query: 3 LEKKIEDL 10
LEK+IE+L
Sbjct: 417 LEKRIENL 424
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 1 STLEKKIEDL 10
STLEK++ D+
Sbjct: 976 STLEKRLTDI 985
>sp|HEMA_I85A4|HEMAGGLUTININ A virus (strain A/Swine/Netherlands/12/1985
Query: 3 LEKKIEDL 10
LEK+IE+L
Sbjct: 417 LEKRIENL 424
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 STLEKKIEDL 10
ST++ K+E+L
Sbjct: 1493 STIDNKVENL 1502
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 1 STLEKKIEDL 10
STL++KIE L
Sbjct: 69 STLDEKIETL 78
>sp|HEMA_I18A0|HEMAGGLUTININ A virus (strain A/Brevig
Query: 1 STLEKKIEDL 10
+ LE++IE+L
Sbjct: 415 NNLERRIENL 424
>sp|HEMA_I76A4|HEMAGGLUTININ A virus (strain A/Duck/Alberta/35/1976
Query: 1 STLEKKIEDL 10
+ LE++IE+L
Sbjct: 415 NNLERRIENL 424
>sp|HEMA_I80A1|HEMAGGLUTININ A virus (strain A/Duck/Australia/749/1980
Query: 1 STLEKKIEDL 10
+ LE++IE+L
Sbjct: 415 NNLERRIENL 424
>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 STLEKKIEDL 10
+ LE++IE+L
Sbjct: 417 NNLERRIENL 426
>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 STLEKKIEDL 10
+ LE++IE+L
Sbjct: 409 NNLERRIENL 418
>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 STLEKKIEDL 10
+ LE++IE+L
Sbjct: 417 NNLERRIENL 426
>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996
Query: 1 STLEKKIEDL 10
+ LE++IE+L
Sbjct: 417 NNLERRIENL 426
>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 STLEKKIEDL 10
+ LE++IE+L
Sbjct: 406 NNLERRIENL 415
>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005
Query: 1 STLEKKIEDL 10
+ LE++IE+L
Sbjct: 416 NNLERRIENL 425
>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003
Query: 1 STLEKKIEDL 10
+ LE++IE+L
Sbjct: 417 NNLERRIENL 426
>sp|HEMA_I02A7|HEMAGGLUTININ A virus (strain A/Teal/China/2978.1/2002
Query: 1 STLEKKIEDL 10
+ LE++IE+L
Sbjct: 413 NNLERRIENL 422
>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 STLEKKIEDL 10
+ LE++IE+L
Sbjct: 417 NNLERRIENL 426
>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky
Query: 1 STLEKKIEDL 10
+ LE++IE+L
Sbjct: 417 NNLERRIENL 426
>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 STLEKKIEDL 10
+ LE++IE+L
Sbjct: 406 NNLERRIENL 415
>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky
Query: 1 STLEKKIEDL 10
+ LE++IE+L
Sbjct: 406 NNLERRIENL 415
>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 STLEKKIEDL 10
+ LE++IE+L
Sbjct: 417 NNLERRIENL 426
>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 STLEKKIEDL 10
+ LE++IE+L
Sbjct: 417 NNLERRIENL 426
>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 STLEKKIEDL 10
+ LE++IE+L
Sbjct: 417 NNLERRIENL 426
>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea
Query: 1 STLEKKIEDL 10
+ LE++IE+L
Sbjct: 415 NNLERRIENL 424
>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 STLEKKIEDL 10
+ LE++IE+L
Sbjct: 406 NNLERRIENL 415
>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 1 STLEKKIEDL 10
+ LE++IE+L
Sbjct: 417 NNLERRIENL 426
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 1 STLEKKIEDL 10
+TLE EDL
Sbjct: 555 TTLESMTEDL 564
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 1 STLEKKIEDL 10
+TLE EDL
Sbjct: 555 TTLESMTEDL 564
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 STLEKKIEDL 10
+TLE EDL
Sbjct: 555 TTLESMTEDL 564
>sp|PORTL_HHV6U|PORTAL protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 LEKKIEDL 10
E+KI+DL
Sbjct: 438 FERKIKDL 445
55|Sequence|271|280|KIEDLEKEVV
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 IEDLEKEV 9
IED+E+E+
Sbjct: 1806 IEDIEREI 1813
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 IEDLEKEV 9
IED+E+E+
Sbjct: 1806 IEDIEREI 1813
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 IEDLEKEV 9
IED+E+E+
Sbjct: 1806 IEDIEREI 1813
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 IEDLEKEV 9
IED+E+E+
Sbjct: 1806 IEDIEREI 1813
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 IEDLEKEV 9
IED+E+E+
Sbjct: 1806 IEDIEREI 1813
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 2 IEDLEKEV 9
IEDL +EV
Sbjct: 2092 IEDLSREV 2099
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 KIEDLEKEV 9
+IED++KE+
Sbjct: 1804 EIEDVKKEI 1812
>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989
Query: 1 KIEDLEKEV 9
+I+DLEK V
Sbjct: 421 RIQDLEKYV 429
>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986
Query: 1 KIEDLEKEV 9
+I+DLEK V
Sbjct: 405 RIQDLEKYV 413
>sp|HEMA_I84A5|HEMAGGLUTININ A virus (strain A/Swine/Ukkel/1/1984
Query: 1 KIEDLEKEV 9
+I+DLEK V
Sbjct: 421 RIQDLEKYV 429
>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 KIEDLEKEV 9
+I+DLEK V
Sbjct: 421 RIQDLEKYV 429
>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 1 KIEDLEKEV 9
+I+DLEK V
Sbjct: 405 RIQDLEKYV 413
>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980
Query: 1 KIEDLEKEV 9
+I+DLEK V
Sbjct: 421 RIQDLEKYV 429
>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979
Query: 1 KIEDLEKEV 9
+I+DLEK V
Sbjct: 405 RIQDLEKYV 413
>sp|HEMA_I78A9|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 1 KIEDLEKEV 9
+I+DLEK V
Sbjct: 405 RIQDLEKYV 413
>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978
Query: 1 KIEDLEKEV 9
+I+DLEK V
Sbjct: 421 RIQDLEKYV 429
>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978
Query: 1 KIEDLEKEV 9
+I+DLEK V
Sbjct: 421 RIQDLEKYV 429
>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 1 KIEDLEKEV 9
+I+DLEK V
Sbjct: 421 RIQDLEKYV 429
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 1 KIEDLEKEV 9
+I+DLEK V
Sbjct: 421 RIQDLEKYV 429
>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977
Query: 1 KIEDLEKEV 9
+I+DLEK V
Sbjct: 421 RIQDLEKYV 429
>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976
Query: 1 KIEDLEKEV 9
+I+DLEK V
Sbjct: 421 RIQDLEKYV 429
>sp|HEMA_I75A3|HEMAGGLUTININ A virus (strain A/Victoria/3/1975
Query: 1 KIEDLEKEV 9
+I+DLEK V
Sbjct: 422 RIQDLEKYV 430
>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 1 KIEDLEKEV 9
+I+DLEK V
Sbjct: 405 RIQDLEKYV 413
>sp|HEMA_I75A0|HEMAGGLUTININ A virus (strain A/Beijing/39/1975
Query: 1 KIEDLEKEV 9
+I+DLEK V
Sbjct: 421 RIQDLEKYV 429
>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port
Query: 1 KIEDLEKEV 9
+I+DLEK V
Sbjct: 421 RIQDLEKYV 429
>sp|HEMA_I72A4|HEMAGGLUTININ A virus (strain A/Memphis/101/1972
Query: 1 KIEDLEKEV 9
+I+DLEK V
Sbjct: 421 RIQDLEKYV 429
>sp|HEMA_I72A3|HEMAGGLUTININ A virus (strain A/Memphis/102/1972
Query: 1 KIEDLEKEV 9
+I+DLEK V
Sbjct: 421 RIQDLEKYV 429
>sp|HEMA_I72A2|HEMAGGLUTININ A virus (strain A/Udorn/307/1972
Query: 1 KIEDLEKEV 9
+I+DLEK V
Sbjct: 421 RIQDLEKYV 429
>sp|HEMA_I71A3|HEMAGGLUTININ A virus (strain A/Equine/Tokyo/1971
Query: 1 KIEDLEKEV 9
+I+DLEK V
Sbjct: 420 RIQDLEKYV 428
>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971
Query: 1 KIEDLEKEV 9
+I+DLEK V
Sbjct: 421 RIQDLEKYV 429
>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern
Query: 1 KIEDLEKEV 9
+I+DLEK V
Sbjct: 421 RIQDLEKYV 429
>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 KIEDLEKEV 9
+I+DLEK V
Sbjct: 421 RIQDLEKYV 429
>sp|HEMA_I68A0|HEMAGGLUTININ A virus (strain A/Aichi/2/1968
Query: 1 KIEDLEKEV 9
+I+DLEK V
Sbjct: 421 RIQDLEKYV 429
>sp|HEMA_I000X|HEMAGGLUTININ A virus (strain A/X-31
Query: 1 KIEDLEKEV 9
+I+DLEK V
Sbjct: 421 RIQDLEKYV 429
>sp|NEF_HV1V9|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 IEDLEKEVV 10
IED E+EV+
Sbjct: 174 IEDPEREVL 182
>sp|NEF_HV1A2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 IEDLEKEVV 10
+ED EKEV+
Sbjct: 177 MEDAEKEVL 185
>sp|NEF_HV1S2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 IEDLEKEVV 10
IED E+EV+
Sbjct: 170 IEDEEREVL 178
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 IEDLEKEVV 10
IED+ +EVV
Sbjct: 3097 IEDIIREVV 3105
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 2 IEDLEKEVV 10
IED+ +EVV
Sbjct: 3070 IEDIIREVV 3078
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 2 IEDLEKEVV 10
IED+ +EVV
Sbjct: 3075 IEDIIREVV 3083
>sp|NEF_HV1S9|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 IEDLEKEVV 10
IED E+EV+
Sbjct: 171 IEDEEREVL 179
>sp|NEF_HV1MA|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 IEDLEKEVV 10
+ED E+EV+
Sbjct: 176 MEDAEREVL 184
>sp|PP85_HCMVM|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 IEDLEKE 8
IED E+E
Sbjct: 182 IEDFERE 188
>sp|PP85_HCMVA|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 IEDLEKE 8
IED E+E
Sbjct: 182 IEDFERE 188
>sp|NEF_HV1S3|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 IEDLEKEVV 10
+ED EKEV+
Sbjct: 172 MEDPEKEVL 180
>sp|NCAP_JUNIN|NUCLEOPROTEIN mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 KIEDLEKEV 9
K+ DL KEV
Sbjct: 66 KLRDLNKEV 74
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 IEDLEKEV 9
IED++K+V
Sbjct: 1816 IEDVKKDV 1823
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 KIEDLEKEVV 10
K+E+++ E+V
Sbjct: 1869 KVENMKAEIV 1878
>sp|NEF_HV1Z6|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 IEDLEKEVV 10
+ED E+EV+
Sbjct: 179 MEDTEREVL 187
>sp|VME1_SARS2|MEMBRANE protein|Severe acute respiratory syndrome coronavirus
Query: 2 IEDLEKEV 9
I+DL KE+
Sbjct: 161 IKDLPKEI 168
>sp|VME1_SARS|MEMBRANE protein|Severe acute respiratory syndrome coronavirus
Query: 2 IEDLEKEV 9
I+DL KE+
Sbjct: 160 IKDLPKEI 167
>sp|NCAP_MACHU|NUCLEOPROTEIN virus (MACV)
Query: 1 KIEDLEKEV 9
K+ DL KEV
Sbjct: 66 KLRDLNKEV 74
56|Sequence|276|285|EKEVVRERQE
>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 1 EKEVVRERQE 10
E+E+V++R+E
Sbjct: 292 EEELVKKREE 301
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 KEVVRERQ 9
KE+V ERQ
Sbjct: 5465 KEIVGERQ 5472
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 EKEVVRERQE 10
+KE ++ER E
Sbjct: 2780 DKEAIKERVE 2789
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 EKEVVRERQE 10
EKE +RE+++
Sbjct: 1415 EKEKLREQED 1424
>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 EKEVVRERQE 10
E+E RERQ+
Sbjct: 370 EEEKRRERQK 379
57|Sequence|281|290|RERQENLRLV
>sp|GL_HHV8P|ENVELOPE glycoprotein L|Human herpesvirus 8 type P
Query: 4 QENLRLV 10
QENLRL+
Sbjct: 97 QENLRLL 103
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 RERQENL 7
+ER+ENL
Sbjct: 1323 KERKENL 1329
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 RERQENLRLV 10
R+R ++RLV
Sbjct: 745 RDRDRSIRLV 754
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 RERQENLRLV 10
R+R ++RLV
Sbjct: 740 RDRDRSIRLV 749
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 RERQENLRLV 10
R+R ++RLV
Sbjct: 740 RDRDRSIRLV 749
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 RERQENLRLV 10
R+R ++RLV
Sbjct: 740 RDRDRSIRLV 749
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 RERQENLRLV 10
R+R ++RLV
Sbjct: 740 RDRDRSIRLV 749
58|Sequence|286|295|NLRLVRLMQD
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 4 LVRLMQD 10
LVRL+QD
Sbjct: 628 LVRLLQD 634
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 4 LVRLMQD 10
LVRL+QD
Sbjct: 628 LVRLLQD 634
>sp|REV_HV2G1|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 2 LRLVRLMQ 9
LRL+RL+
Sbjct: 14 LRLIRLLH 21
>sp|REV_HV2NZ|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 2 LRLVRLMQ 9
LRL+RL+
Sbjct: 14 LRLIRLLH 21
>sp|REV_HV2RO|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 2 LRLVRLMQ 9
LRL+RL+
Sbjct: 14 LRLIRLLH 21
59|Sequence|291|300|RLMQDKEEMI
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 RLMQDKEEMI 10
RL Q+KEE++
Sbjct: 1925 RLDQEKEELL 1934
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 RLMQDKEEMI 10
RL Q+KEE++
Sbjct: 1925 RLDQEKEELL 1934
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 RLMQDKEEMI 10
RL Q+KEE++
Sbjct: 1917 RLDQEKEELL 1926
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 LMQDKEEMI 10
+MQD+EE +
Sbjct: 1937 IMQDQEERV 1945
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 RLMQDK 6
RL+QDK
Sbjct: 630 RLLQDK 635
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 1 RLMQDK 6
RL+QDK
Sbjct: 630 RLLQDK 635
>sp|HBZ_HTL1C|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1
Query: 1 RLMQDKEEMI 10
RL+Q+KE+++
Sbjct: 184 RLLQEKEDLM 193
60|Sequence|296|305|KEEMIGKLKE
>sp|UL88_HHV7J|PROTEIN U59|Human herpesvirus 7 (strain JI)
Query: 2 EEMIGKLKE 10
EEM GKL++
Sbjct: 226 EEMNGKLRQ 234
>sp|VP3_ROT41|PROTEIN VP3|Rotavirus A (isolate RVA/Human/Belgium/B4106/2000/G3P11[14])
Query: 2 EEMIGKLKE 10
E+ IGKLK+
Sbjct: 325 EKDIGKLKD 333
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 KEEMIGKL 8
+EE IGK+
Sbjct: 2923 REEFIGKV 2930
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 KEEMIGKLK 9
+EE I K+K
Sbjct: 2908 REEFIAKVK 2916
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 KEEMIGKLK 9
+EE I K+K
Sbjct: 2908 REEFIAKVK 2916
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 KEEMIGKLK 9
+EE I K+K
Sbjct: 2906 REEFIAKVK 2914
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 KEEMIGKLK 9
+EE I K+K
Sbjct: 2908 REEFIAKVK 2916
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 KEEMIGKLKE 10
KE++IG L++
Sbjct: 1734 KEKVIGLLQQ 1743
61|Sequence|301|310|GKLKEEIDLL
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 2 KLKEEIDLL 10
K+K EID L
Sbjct: 1159 KIKMEIDTL 1167
>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 GKLKEEIDLL 10
G+L+EE + L
Sbjct: 499 GELREEFNAL 508
>sp|VP4_ROTH6|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 GKLKEEIDLL 10
G+L+EE + L
Sbjct: 499 GELREEFNAL 508
>sp|VP4_ROT41|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 GKLKEEIDLL 10
G+L+EE + L
Sbjct: 499 GELREEFNAL 508
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 3 LKEEIDLL 10
LKEEI+ L
Sbjct: 597 LKEEIERL 604
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 3 LKEEIDLL 10
LKEEI+ L
Sbjct: 596 LKEEIERL 603
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 3 LKEEIDLL 10
LKEEI+ L
Sbjct: 597 LKEEIERL 604
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 3 LKEEIDLL 10
LKEEI+ L
Sbjct: 596 LKEEIERL 603
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 3 LKEEIDLL 10
LKEEI+ L
Sbjct: 596 LKEEIERL 603
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 3 LKEEIDLL 10
LKEEI+ L
Sbjct: 596 LKEEIERL 603
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 3 LKEEIDLL 10
LKEEI+ L
Sbjct: 596 LKEEIERL 603
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 3 LKEEIDLL 10
LKEEI+ L
Sbjct: 596 LKEEIERL 603
62|Sequence|306|315|EIDLLNRDLD
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 EIDLLNRDL 9
E+DL NRD+
Sbjct: 1382 ELDLCNRDV 1390
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 EIDLLNRDL 9
E+DL NRD+
Sbjct: 1367 ELDLCNRDV 1375
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 EIDLLNRDL 9
E+DL NRD+
Sbjct: 1382 ELDLCNRDV 1390
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 EIDLLNRDL 9
E+DL NRD+
Sbjct: 1367 ELDLCNRDV 1375
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 EIDLLNRDL 9
E+DL NRD+
Sbjct: 1367 ELDLCNRDV 1375
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 EIDLLNRDL 9
E+DL NRD+
Sbjct: 1367 ELDLCNRDV 1375
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 EIDLLNRDL 9
E+DL +RD+
Sbjct: 1367 ELDLCSRDV 1375
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 1 EIDLLNRDL 9
E+DL +RD+
Sbjct: 1365 ELDLCSRDV 1373
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 1 EIDLLNRDL 9
E+DL +RD+
Sbjct: 1381 ELDLCSRDV 1389
>sp|PHOSP_ABLVB|PHOSPHOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 IDLLNRDLD 10
+DL+NR+++
Sbjct: 25 VDLINRNIE 33
>sp|MATRX_HMPVC|MATRIX protein|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 EIDLLNRDL 9
++DL+ +DL
Sbjct: 19 QVDLVEKDL 27
>sp|PHOSP_RABVM|PHOSPHOPROTEIN virus (strain PM) (RABV)
Query: 2 IDLLNRDLD 10
+DL+NR+++
Sbjct: 25 VDLINRNIE 33
>sp|PHOSP_RABVE|PHOSPHOPROTEIN virus (strain ERA) (RABV)
Query: 2 IDLLNRDLD 10
+DL+NR+++
Sbjct: 25 VDLINRNIE 33
>sp|PHOSP_RABVS|PHOSPHOPROTEIN virus (strain SAD B19)
Query: 2 IDLLNRDLD 10
+DL+NR+++
Sbjct: 25 VDLINRNIE 33
>sp|PHOSP_RABVP|PHOSPHOPROTEIN virus (strain Pasteur vaccins
Query: 2 IDLLNRDLD 10
+DL+NR+++
Sbjct: 25 VDLINRNIE 33
>sp|PHOSP_ABLVH|PHOSPHOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 2 IDLLNRDLD 10
+DL+NR+++
Sbjct: 25 VDLINRNIE 33
>sp|FUS_HRSV|FUSION glycoprotein F0|Human respiratory syncytial virus
Query: 1 EIDLLNRDLD 10
++ L+N++LD
Sbjct: 75 KVKLINQELD 84
>sp|UL24_VZVO|PROTEIN UL24 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 3 DLLNRDLD 10
D+L +D+D
Sbjct: 23 DVLKKDID 30
>sp|UL24_VZVD|PROTEIN UL24 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 DLLNRDLD 10
D+L +D+D
Sbjct: 23 DVLKKDID 30
>sp|PHOSP_RABVN|PHOSPHOPROTEIN virus (strain Nishigahara RCEH)
Query: 2 IDLLNRDLD 10
+DL+NR+++
Sbjct: 25 VDLINRNIE 33
>sp|TRM1_HHV7J|TRIPARTITE terminase subunit 1|Human herpesvirus 7 (strain JI)
Query: 2 IDLLNRDLD 10
+D++ +DLD
Sbjct: 231 VDIIEKDLD 239
>sp|PHOSP_RABVC|PHOSPHOPROTEIN virus (strain CVS-11) (RABV)
Query: 2 IDLLNRDLD 10
+DL+NR+++
Sbjct: 25 VDLINRNIE 33
>sp|PHOSP_RABVR|PHOSPHOPROTEIN virus (strain China/MRV) (RABV)
Query: 2 IDLLNRDLD 10
+DL+NR+++
Sbjct: 25 VDLINRNIE 33
>sp|PHOSP_RABVH|PHOSPHOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 2 IDLLNRDLD 10
+DL+NR+++
Sbjct: 25 VDLINRNIE 33
>sp|PHOSP_RABVA|PHOSPHOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 2 IDLLNRDLD 10
+DL+NR+++
Sbjct: 25 VDLINRNIE 33
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 2 IDLLNRD 8
+DL NRD
Sbjct: 1505 LDLFNRD 1511
63|Sequence|311|320|NRDLDDIEDE
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 NRDLDDI 7
NR LDDI
Sbjct: 618 NRSLDDI 624
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 NRDLDDIEDE 10
N+DL +IED+
Sbjct: 91 NQDLFNIEDK 100
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 NRDLDDIEDE 10
N+DL +IED+
Sbjct: 91 NQDLFNIEDK 100
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 NRDLDDIEDE 10
N+DL +IED+
Sbjct: 91 NQDLFNIEDK 100
>sp|VE2_HPV29|REGULATORY protein E2|Human papillomavirus 29
Query: 2 RDLDDIEDE 10
RD D +ED+
Sbjct: 21 RDSDKLEDQ 29
>sp|NS1_INBHT|NON-STRUCTURAL protein 1|Influenza B virus (strain B/HT/1984)
Query: 2 RDLDDIEDE 10
R LDDIE+E
Sbjct: 127 RCLDDIEEE 135
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 NRDLDDIE 8
N DLDD E
Sbjct: 3056 NADLDDEE 3063
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 DLDDIE 8
D+DDIE
Sbjct: 1055 DVDDIE 1060
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 DLDDIE 8
D+DDIE
Sbjct: 1055 DVDDIE 1060
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 DLDDIE 8
D+DDIE
Sbjct: 1075 DVDDIE 1080
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 DLDDIE 8
D+DDIE
Sbjct: 1075 DVDDIE 1080
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 DLDDIE 8
D+DDIE
Sbjct: 1105 DVDDIE 1110
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 DLDDIE 8
D+DDIE
Sbjct: 1105 DVDDIE 1110
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 3 DLDDIEDE 10
DLDDI+ E
Sbjct: 1990 DLDDIDFE 1997
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 NRDLDD 6
N DLDD
Sbjct: 887 NSDLDD 892
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 3 DLDDIEDE 10
DLDDI+ E
Sbjct: 1987 DLDDIDFE 1994
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 NRDLDDI 7
NR LD+I
Sbjct: 606 NRSLDEI 612
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 3 DLDDIEDE 10
DLDDI+ E
Sbjct: 1990 DLDDIDFE 1997
>sp|VL2_HPV07|MINOR capsid protein L2|Human papillomavirus 7
Query: 3 DLDDIED 9
D+DDI++
Sbjct: 355 DIDDIDE 361
>sp|VL2_HPV40|MINOR capsid protein L2|Human papillomavirus 40
Query: 3 DLDDIEDE 10
D+D I+D+
Sbjct: 370 DMDTIDDD 377
>sp|NS1_INBAD|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Ann
Query: 4 LDDIEDE 10
LDDIE+E
Sbjct: 129 LDDIEEE 135
>sp|NS1_INBAC|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Ann
Query: 4 LDDIEDE 10
LDDIE+E
Sbjct: 129 LDDIEEE 135
>sp|NS1_INBYA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Yamagata/1/1973)
Query: 4 LDDIEDE 10
LDDIE+E
Sbjct: 129 LDDIEEE 135
>sp|NS1_INBSJ|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Singapore/1964)
Query: 4 LDDIEDE 10
LDDIE+E
Sbjct: 129 LDDIEEE 135
>sp|NS1_INBSI|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Singapore/222/1979)
Query: 4 LDDIEDE 10
LDDIE+E
Sbjct: 129 LDDIEEE 135
>sp|NS1_INB|NON-STRUCTURAL protein 1|Influenza B virus (strain B/ID/1986)
Query: 4 LDDIEDE 10
LDDIE+E
Sbjct: 129 LDDIEEE 135
>sp|NS1_INBHK|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Hong
Query: 4 LDDIEDE 10
LDDIE+E
Sbjct: 129 LDDIEEE 135
>sp|NS1_INBBA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/BA/1978)
Query: 4 LDDIEDE 10
LDDIE+E
Sbjct: 129 LDDIEEE 135
>sp|NS1_INBVJ|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Victoria/1987)
Query: 4 LDDIEDE 10
LDDIE+E
Sbjct: 129 LDDIEEE 135
>sp|NS1_INBRU|NON-STRUCTURAL protein 1|Influenza B virus (strain B/RU/1969)
Query: 4 LDDIEDE 10
LDDIE+E
Sbjct: 129 LDDIEEE 135
>sp|NS1_INBMD|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Maryland/1959)
Query: 4 LDDIEDE 10
LDDIE+E
Sbjct: 129 LDDIEEE 135
>sp|NS1_INBPA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/PA/1979)
Query: 4 LDDIEDE 10
LDDIE+E
Sbjct: 129 LDDIEEE 135
>sp|NS1_INBLE|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Lee/1940)
Query: 4 LDDIEDE 10
LDDIE+E
Sbjct: 129 LDDIEEE 135
>sp|NS1_INBGL|NON-STRUCTURAL protein 1|Influenza B virus (strain B/GL/1954)
Query: 4 LDDIEDE 10
LDDIE+E
Sbjct: 129 LDDIEEE 135
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 1 NRDLDDIED 9
N D DD ED
Sbjct: 34 NYDGDDTED 42
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 3 DLDDIEDE 10
+LD +E+E
Sbjct: 138 ELDSVEEE 145
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 3 DLDDIEDE 10
+LD +E+E
Sbjct: 138 ELDSVEEE 145
64|Sequence|316|325|DIEDENEQLK
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 DIEDENEQLK 10
D+EDE E LK
Sbjct: 3046 DLEDEQEILK 3055
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 DIEDENEQLK 10
D+EDE + L+
Sbjct: 3056 DLEDEEQLLR 3065
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 DIEDENEQLK 10
D+EDE + L+
Sbjct: 3058 DLEDEEQILR 3067
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 DIEDENEQLK 10
D+EDE + L+
Sbjct: 3058 DLEDEEQILR 3067
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 DIEDENEQLK 10
D+EDE + L+
Sbjct: 3059 DLEDEEQILR 3068
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 DIEDENEQLK 10
D+EDE + L+
Sbjct: 3058 DLEDEEQILR 3067
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 DIEDENEQLK 10
D+EDE + L+
Sbjct: 3058 DLEDEEQILR 3067
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 DIEDENEQLK 10
D+EDE + L+
Sbjct: 3060 DLEDEEQILR 3069
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 DIEDENEQLK 10
D+EDE + L+
Sbjct: 3060 DLEDEEQILR 3069
>sp|NEP_INBLE|NUCLEAR export protein|Influenza B virus (strain B/Lee/1940)
Query: 1 DIEDENEQLK 10
DI+ + EQLK
Sbjct: 32 DIQSQFEQLK 41
>sp|NEP_INBYA|NUCLEAR export protein|Influenza B virus (strain B/Yamagata/1/1973)
Query: 1 DIEDENEQLK 10
DI+ + EQLK
Sbjct: 32 DIQSQFEQLK 41
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 3 EDENEQLK 10
ED+ +QLK
Sbjct: 121 EDQKQQLK 128
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 2 IEDENEQL 9
++D NEQ+
Sbjct: 1555 LQDANEQI 1562
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 2 IEDENEQL 9
++D NEQ+
Sbjct: 1554 LQDANEQI 1561
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 2 IEDENEQL 9
++D NEQ+
Sbjct: 1555 LQDANEQI 1562
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 1 DIEDENEQL 9
DIE++ EQL
Sbjct: 25 DIENDMEQL 33
65|Sequence|321|330|NEQLKQENKT
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 2 EQLKQENKT 10
EQL+ EN T
Sbjct: 1392 EQLRHENAT 1400
66|Sequence|326|340|QENKTLLKVVGQLTR
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 7 LKVVGQLT 14
L++VGQLT
Sbjct: 297 LRIVGQLT 304
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 NKTLLKVVGQL 13
NK L K++GQ+
Sbjct: 1297 NKELKKIIGQI 1307
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 NKTLLKVVGQL 13
NK L K++GQ+
Sbjct: 1312 NKELKKIIGQI 1322
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 NKTLLKVVGQL 13
NK L K++GQ+
Sbjct: 1297 NKELKKIIGQI 1307
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 NKTLLKVVGQL 13
N+TLL ++GQ+
Sbjct: 6 NRTLLVLLGQV 16
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 NKTLLKVVGQL 13
NK L K++GQ+
Sbjct: 1299 NKELKKIIGQV 1309
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 NKTLLKVVGQL 13
NK L K++GQ+
Sbjct: 1299 NKELKKIIGQV 1309
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 NKTLLKVVGQL 13
NK L K++GQ+
Sbjct: 1301 NKELKKIIGQV 1311
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 NKTLLKVVGQL 13
NK L K++GQ+
Sbjct: 1306 NKELKKIIGQV 1316
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 NKTLLKVVGQL 13
NK L K++GQ+
Sbjct: 1297 NKELKKIIGQV 1307
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 NKTLLKVVGQL 13
NK L K++GQ+
Sbjct: 1295 NKELKKIIGQV 1305
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 NKTLLKVVGQL 13
NK L K++GQ+
Sbjct: 1302 NKELKKIIGQV 1312
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 NKTLLKVVGQL 13
NK L K++GQ+
Sbjct: 1302 NKELKKIIGQV 1312
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 NKTLLKVVGQL 13
NK L K++GQ+
Sbjct: 1302 NKELKKIIGQV 1312
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 NKTLLKVVGQL 13
NK L K++GQ+
Sbjct: 1314 NKELKKIIGQV 1324
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 NKTLLKVVGQL 13
NK L K++GQ+
Sbjct: 1297 NKELKKIIGQV 1307
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 NKTLLKVVGQL 13
NK L K++GQ+
Sbjct: 1303 NKELKKIIGQV 1313
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 NKTLLKVVGQL 13
NK L K++GQ+
Sbjct: 1302 NKELKKIIGQV 1312
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 NKTLLKVVGQL 13
NK L K++GQ+
Sbjct: 1299 NKELKKIIGQV 1309
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 NKTLLKVVGQL 13
NK L K++GQ+
Sbjct: 1302 NKELKKIIGQV 1312
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 NKTLLKVVGQL 13
NK L K++GQ+
Sbjct: 1302 NKELKKIIGQV 1312
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 NKTLLKVVGQL 13
NK L K++GQ+
Sbjct: 1308 NKELKKIIGQV 1318
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 NKTLLKVVGQL 13
NK L K++GQ+
Sbjct: 1306 NKELKKIIGQV 1316
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 NKTLLKVVGQL 13
NK L K++GQ+
Sbjct: 1314 NKELKKIIGQV 1324
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 NKTLLKVVGQL 13
NK L K++GQ+
Sbjct: 1314 NKELKKIIGQV 1324
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 NKTLLKVVGQL 13
NK L K++GQ+
Sbjct: 1298 NKELKKIIGQV 1308
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 NKTLLKVVGQL 13
NK L K++GQ+
Sbjct: 1312 NKELKKIIGQI 1322
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 2 ENKTLLKVVGQLTR 15
E KTL V GQ T+
Sbjct: 746 EVKTLEPVTGQATQ 759
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 NKTLLKVVGQL 13
NK L K++GQ+
Sbjct: 1303 NKELKKIIGQV 1313
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 NKTLLKVVGQL 13
NK L K++GQ+
Sbjct: 1300 NKELKKIIGQV 1310
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 NKTLLKVVGQL 13
NK L K++GQ+
Sbjct: 1302 NKELKKIIGQV 1312
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 NKTLLKVVGQL 13
NK L K++GQ+
Sbjct: 1297 NKELKKIIGQV 1307
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 NKTLLKVVGQL 13
NK L K++GQ+
Sbjct: 1307 NKELKKIIGQV 1317
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 4 KTLLKVVG 11
KTLLKVV
Sbjct: 1662 KTLLKVVA 1669
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 NKTLLKVVGQL 13
NK L K++GQ+
Sbjct: 1302 NKELKKIIGQV 1312
>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1
Query: 2 ENKTLLKVVGQLT 14
E + +L VVGQ+T
Sbjct: 138 ELEEVLDVVGQIT 150
>sp|POL_HV1Z6|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 NKTLLKVVGQL 13
NK L K++GQ+
Sbjct: 15 NKELKKIIGQV 25
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 1 QENKTLLKVVG 11
+E K LL V+G
Sbjct: 1000 KEGKHLLDVIG 1010
>sp|VC18_VACCC|ANKYRIN repeat protein C18/B24|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 ENKTLL 7
ENKTLL
Sbjct: 41 ENKTLL 46
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 4 KTLLKVVGQLTR 15
KT+L VVG R
Sbjct: 1351 KTVLNVVGPDAR 1362
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 KTLLKVVGQLTR 15
KT+L VVG R
Sbjct: 1351 KTVLNVVGPDAR 1362
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 4 KTLLKVVG 11
KT+LKVV
Sbjct: 1632 KTMLKVVA 1639
>sp|VD4L_CWPXG|ANKYRIN repeat protein D4L/I2R|Cowpox virus (strain GRI-90 /
Query: 2 ENKTLL 7
ENKTLL
Sbjct: 461 ENKTLL 466
>sp|PHOSP_PI1HB|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 1 QENKTLLKVVGQ 12
+EN+TLLK + +
Sbjct: 387 EENRTLLKQIQE 398
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 4 KTLLKVVGQL 13
KTL+K++ L
Sbjct: 1077 KTLIKIISTL 1086
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QENKTLLKVVGQL 13
Q N+TL KV+ +L
Sbjct: 340 QWNETLHKVITKL 352
>sp|PHOSP_PI1HC|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 1 QENKTLLKVVGQ 12
+EN+TLLK + +
Sbjct: 387 EENRTLLKQIQE 398
>sp|PG056_VACCA|PROTEIN OPG056|Vaccinia virus (strain Ankara) (VACV)
Query: 3 NKTLLKVVGQLT 14
N T+L+V+G T
Sbjct: 55 NITILEVIGLTT 66
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 ENKTLLKVVG 11
EN T+L+ G
Sbjct: 4964 ENSTILQAAG 4973
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 4 KTLLKVVGQLTR 15
KT+L +VG R
Sbjct: 1388 KTILNIVGPDAR 1399
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 4 KTLLKVVGQLTR 15
KT+L +VG R
Sbjct: 1408 KTILNIVGPDAR 1419
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 4 KTLLKVVGQLTR 15
KT+L +VG R
Sbjct: 1438 KTILNIVGPDAR 1449
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 KTLLKVVGQLTR 15
KT+L +VG R
Sbjct: 1388 KTILNIVGPDAR 1399
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 KTLLKVVGQLTR 15
KT+L +VG R
Sbjct: 1408 KTILNIVGPDAR 1419
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 KTLLKVVGQLTR 15
KT+L +VG R
Sbjct: 1438 KTILNIVGPDAR 1449
>sp|PHOSP_PI1HD|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 1 QENKTLLKVVGQ 12
+EN+TLLK + +
Sbjct: 387 EENRTLLKQIQE 398
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 1 QENKTLLK 8
QEN+ LLK
Sbjct: 334 QENEQLLK 341
>sp|PHOSP_PI1HE|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 1 QENKTLLKVVGQ 12
+EN+TLLK + +
Sbjct: 387 EENRTLLKQIQE 398
67|Sequence|331|340|LLKVVGQLTR
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 2 LKVVGQLT 9
L++VGQLT
Sbjct: 297 LRIVGQLT 304
>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1
Query: 1 LLKVVGQLT 9
+L VVGQ+T
Sbjct: 142 VLDVVGQIT 150
>sp|ETF1_MCV1|EARLY transcription factor 70 kDa|Molluscum contagiosum virus subtype 1
Query: 4 VVGQLTR 10
V+G+LTR
Sbjct: 540 VLGELTR 546