NU2M_HUMAN Blast Output
Archaea
1|Sequence|1|10|MNPLAQPVIY

>sp|GATD_THEVO|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermoplasma volcanium (strain ATCC

Query: 4 LAQPVIY 10
LAQP+I+
Sbjct: 169 LAQPIIF 175


>sp|HMGCS_AERPE|HYDROXYMETHYLGLUTARYL-COA synthase|Aeropyrum pernix (strain ATCC 700893

Query: 3 PLAQPVIY 10
PLAQP+ Y
Sbjct: 329 PLAQPLEY 336


>sp|CSD_PYRAB|PROBABLE cysteine desulfurase|Pyrococcus abyssi (strain GE5 /

Query: 3 PLAQPVIY 10
PL Q VIY
Sbjct: 12 PLTQEVIY 19


>sp|RS15_METS5|SMALL ribosomal subunit protein uS15|Metallosphaera sedula (strain ATCC

Query: 3 PLAQPVI 9
PLA+P+I
Sbjct: 59 PLAKPII 65


>sp|RUVB_METB6|HOLLIDAY junction branch migration complex|Methanoregula boonei (strain DSM

Query: 1 MNPLAQPVIY 10
MNP+ + ++Y
Sbjct: 115 MNPVVEEILY 124


>sp|Y2133_ARCFU|UNCHARACTERIZED protein AF_2133|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NPLAQPVIY 10
NPL P+I+
Sbjct: 251 NPLRDPIIW 259




2|Sequence|6|15|QPVIYSTIFA

>sp|CSX1_METJA|CRISPR system endoribonuclease Csx1|Methanocaldococcus jannaschii (strain

Query: 2 PVIYSTIF 9
P++YST F
Sbjct: 252 PLVYSTFF 259


>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 1 QPVIYSTI 8
+P+IYS I
Sbjct: 287 EPIIYSNI 294


>sp|GLCAE_SULTO|D-GLUCOSAMINE-6-PHOSPHATE 4-epimerase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PVIYSTIF 9
P+IYS+ F
Sbjct: 178 PIIYSSTF 185


>sp|CDPAS_SULTO|CDP-ARCHAEOL synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PVIYSTIFA 10
P+IY IFA
Sbjct: 2 PIIYYVIFA 10




3|Sequence|11|20|STIFAGTLIT

***** No hits found ******


4|Sequence|16|25|GTLITALSSH

***** No hits found ******


5|Sequence|21|30|ALSSHWFFTW

>sp|SYM_SACI4|METHIONINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 SSHWFF 8
S HWFF
Sbjct: 185 SKHWFF 190


>sp|TMBL1_PYRFU|HTH-TYPE sugar sensing transcriptional regulator|Pyrococcus furiosus (strain

Query: 5 HWFFT 9
HWF+T
Sbjct: 234 HWFYT 238


>sp|SYM_HYPBU|METHIONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 3 SSHWFF 8
S HWFF
Sbjct: 185 SKHWFF 190


>sp|SYM_SULAC|METHIONINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LSSHWFF 8
++ HWFF
Sbjct: 184 VTKHWFF 190


>sp|SYM_SULTO|METHIONINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 SSHWFF 8
+ HWFF
Sbjct: 185 TKHWFF 190


>sp|SYM_SACS2|METHIONINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 SSHWFF 8
+ HWFF
Sbjct: 185 TKHWFF 190


>sp|SYM_METS5|METHIONINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 3 SSHWFF 8
+ HWFF
Sbjct: 185 TKHWFF 190


>sp|FSX1_HALS0|FUSEXIN 1|Haloferax sp. (strain Q22)

Query: 1 ALSSHWFFTW 10
A ++ WF TW
Sbjct: 147 ARANRWFDTW 156


>sp|SYM_THEPD|METHIONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 3 SSHWFF 8
++HWFF
Sbjct: 190 TTHWFF 195


>sp|SYM_KORCO|METHIONINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 SSHWFF 8
+ HWFF
Sbjct: 183 TKHWFF 188


>sp|Y1207_METJA|UNCHARACTERIZED N-acetyltransferase MJ1207|Methanocaldococcus jannaschii (strain

Query: 4 SHWFFTW 10
+ W+F W
Sbjct: 110 ARWYFKW 116


>sp|SYM_IGNH4|METHIONINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 5 HWFF 8
HWFF
Sbjct: 187 HWFF 190




6|Sequence|26|35|WFFTWVGLEM

>sp|FMDC_METWO|MOLYBDENUM-CONTAINING formylmethanofuran dehydrogenase 1 subunit|Methanothermobacter

Query: 4 TWVGLEM 10
+W+G+EM
Sbjct: 111 SWIGMEM 117


>sp|FMDC_METTM|MOLYBDENUM-CONTAINING formylmethanofuran dehydrogenase 1 subunit|Methanothermobacter

Query: 4 TWVGLEM 10
+W+G+EM
Sbjct: 111 SWIGMEM 117


>sp|FMDC_METTH|MOLYBDENUM-CONTAINING formylmethanofuran dehydrogenase 1 subunit|Methanothermobacter

Query: 4 TWVGLEM 10
+W+G+EM
Sbjct: 111 SWIGMEM 117


>sp|T1RH_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 2 FFTWVGLE 9
FF W G+E
Sbjct: 236 FFVWEGVE 243


>sp|FSX1_HALS0|FUSEXIN 1|Haloferax sp. (strain Q22)

Query: 1 WFFTWVG 7
WF TW G
Sbjct: 152 WFDTWTG 158


>sp|Y1194_METTH|PROBABLE deacetylase MTH_1194|Methanothermobacter thermautotrophicus (strain

Query: 2 FFTWVG 7
FF+W+G
Sbjct: 260 FFSWIG 265


>sp|SYE_METAC|GLUTAMATE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 WFFTWVGLEM 10
+FF W +E+
Sbjct: 418 YFFVWAPVEL 427


>sp|FMDC_METBF|MOLYBDENUM-CONTAINING formylmethanofuran dehydrogenase 1 subunit|Methanosarcina barkeri

Query: 4 TWVGLEM 10
+W G+EM
Sbjct: 147 SWAGMEM 153


>sp|Y258_PYRAB|UPF0273 protein PYRAB02580|Pyrococcus abyssi (strain GE5 /

Query: 3 FTWVGLEM 10
F W GL+M
Sbjct: 43 FLWNGLQM 50


>sp|Y1931_PYRFU|UPF0273 protein PF1931|Pyrococcus furiosus (strain ATCC 43587

Query: 3 FTWVGLEM 10
F W GL+M
Sbjct: 43 FLWNGLQM 50


>sp|PURL_CALMQ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 FTWVGLEM 10
F W GLE+
Sbjct: 698 FKWGGLEL 705


>sp|Y1013_ARCFU|UNCHARACTERIZED protein AF_1013|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FFTWVGLEM 10
FF W+GL++
Sbjct: 28 FFIWIGLKV 36


>sp|Y039_METKA|UPF0273 protein MK0039|Methanopyrus kandleri (strain AV19 /

Query: 3 FTWVGLE 9
F W GLE
Sbjct: 44 FIWAGLE 50


>sp|Y1590_THEKO|UPF0273 protein TK1590|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 FTWVGLEM 10
F W GL+M
Sbjct: 43 FLWNGLQM 50


>sp|RS7_AERPE|SMALL ribosomal subunit protein uS7|Aeropyrum pernix (strain ATCC

Query: 3 FTWVGLEM 10
++WVG+E+
Sbjct: 27 WSWVGVEV 34


>sp|PORA_METTH|PYRUVATE synthase subunit PorA|Methanothermobacter thermautotrophicus

Query: 4 TWVGLE 9
TW+GL+
Sbjct: 374 TWIGLK 379




7|Sequence|31|40|VGLEMNMLAF

>sp|SERA_ARCFU|D-3-PHOSPHOGLYCERATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GLEMNMLAF 10
LEMN+LA+
Sbjct: 160 ALEMNVLAY 168




8|Sequence|36|45|NMLAFIPVLT

>sp|DNLI_STAMF|DNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 NMLAFIPV 8
++LAF+PV
Sbjct: 112 SILAFVPV 119


>sp|MALE_PYRFU|MALTOTRIOSE-BINDING protein|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LAFIPVLT 10
L +IPVLT
Sbjct: 354 LGYIPVLT 361




9|Sequence|41|50|IPVLTKKMNP

>sp|NQOR_METAC|NAD(P)H dehydrogenase (quinone)|Methanosarcina acetivorans (strain ATCC

Query: 1 IPVLTKKMN 9
IPVLT++MN
Sbjct: 63 IPVLTREMN 71


>sp|AGLB2_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VLTKKMNP 10
++TKK+NP
Sbjct: 292 IITKKLNP 299


>sp|PURL_SACI4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.14.25 /

Query: 1 IPVLTKKMNP 10
IP+ K MNP
Sbjct: 278 IPLRVKNMNP 287


>sp|PURL_SACI6|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.4 /

Query: 1 IPVLTKKMNP 10
IP+ K MNP
Sbjct: 278 IPLRVKNMNP 287


>sp|PURL_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IPVLTKKMNP 10
IP+ K MNP
Sbjct: 278 IPLRVKNMNP 287


>sp|PURL_SACI3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.27)

Query: 1 IPVLTKKMNP 10
IP+ K MNP
Sbjct: 278 IPLRVKNMNP 287


>sp|Y2328_HALVD|UNCHARACTERIZED isochorismatase family protein HVO_2328|Haloferax volcanii

Query: 2 PVLTKKMN 9
PV TK++N
Sbjct: 86 PVFTKRVN 93


>sp|Y33A_METJA|UNCHARACTERIZED protein MJ0332.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IPVLTKKMNP 10
IPVL+KK P
Sbjct: 54 IPVLSKKAVP 63


>sp|Y2097_ARCFU|PUTATIVE nickel insertion protein|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IPVLTKKMNP 10
IP KKM P
Sbjct: 276 IPAYGKKMRP 285


>sp|Y142_METJA|PUTATIVE toxin MJ0142|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VLTKKMNP 10
+LTK++NP
Sbjct: 56 LLTKEINP 63


>sp|Y605_METJA|PUTATIVE toxin MJ0605|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VLTKKMNP 10
+LTK +NP
Sbjct: 55 LLTKNLNP 62


>sp|RPE_METJA|RIBULOSE-PHOSPHATE 3-epimerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IPVLTKKM 8
IPV+TKK+
Sbjct: 146 IPVMTKKI 153


>sp|ATGT_PYRAE|TRNA-GUANINE(15) transglycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 IPVLTKKMNP 10
+P+L+KK+ P
Sbjct: 475 LPMLSKKVIP 484




10|Sequence|46|55|KKMNPRSTEA

>sp|HELS_SACI5|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus islandicus (strain REY15A)

Query: 1 KKMNPRSTEA 10
KK+NP TEA
Sbjct: 29 KKLNPPQTEA 38


>sp|HELS_SULAC|ATP-DEPENDENT DNA helicase Hel308|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KKMNPRSTEA 10
KK+NP TEA
Sbjct: 25 KKLNPPQTEA 34


>sp|HELS_SACS2|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KKMNPRSTEA 10
KK+NP TEA
Sbjct: 22 KKLNPPQTEA 31


>sp|HELS_SACS9|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain 98/2)

Query: 1 KKMNPRSTEA 10
KK+NP TEA
Sbjct: 29 KKLNPPQTEA 38


>sp|FTSZ_THEAC|CELL division protein FtsZ|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KKMNPRS 7
KK+NPRS
Sbjct: 315 KKINPRS 321


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 2 KMNPRST 8
++NPRST
Sbjct: 98 RVNPRST 104


>sp|RS15_NANEQ|SMALL ribosomal subunit protein uS15|Nanoarchaeum equitans (strain

Query: 2 KMNPRSTEA 10
++NPR T+A
Sbjct: 105 ELNPRDTQA 113




11|Sequence|51|60|RSTEAAIKYF

>sp|MTAA_METBA|METHYLCOBAMIDE:COM methyltransferase MtaA|Methanosarcina barkeri

Query: 2 STEAAIKY 9
STEAAI Y
Sbjct: 179 STEAAIAY 186


>sp|HJA3_METJA|PROBABLE archaeal histone 3|Methanocaldococcus jannaschii (strain ATCC

Query: 1 RSTEAAIKYF 10
R +EAA KYF
Sbjct: 20 RVSEAAGKYF 29


>sp|TRUB_PYRAE|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum aerophilum (strain ATCC

Query: 1 RSTEAAIKY 9
RSTE IKY
Sbjct: 27 RSTEEYIKY 35




12|Sequence|56|65|AIKYFLTQAT

>sp|RIBL_METBF|FAD synthase|Methanosarcina barkeri (strain Fusaro /

Query: 4 YFLTQA 9
YFLTQA
Sbjct: 19 YFLTQA 24


>sp|RIBL_METAC|FAD synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 YFLTQA 9
YFLTQA
Sbjct: 31 YFLTQA 36




13|Sequence|61|70|LTQATASMIL

***** No hits found ******


14|Sequence|66|75|ASMILLMAIL

***** No hits found ******


15|Sequence|71|80|LMAILFNNML

>sp|NADK_SULTO|NAD kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 MAILFNN 8
+AILFNN
Sbjct: 112 IAILFNN 118




16|Sequence|76|85|FNNMLSGQWT

>sp|GAPN_SACS2|NAD(P)-DEPENDENT glyceraldehyde-3-phosphate dehydrogenase|Saccharolobus

Query: 1 FNNMLSGQW 9
F LSGQW
Sbjct: 26 FKTYLSGQW 34


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 NMLSGQW 9
NM+ GQW
Sbjct: 448 NMVKGQW 454


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 NMLSGQW 9
NM+ GQW
Sbjct: 448 NMVKGQW 454


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 NMLSGQW 9
NM+ GQW
Sbjct: 448 NMVKGQW 454


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 NMLSGQW 9
NM+ GQW
Sbjct: 448 NMVKGQW 454


>sp|Y1446_ARCFU|UNCHARACTERIZED protein AF_1446|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FNNMLSGQWT 10
F N ++G WT
Sbjct: 35 FTNSINGLWT 44


>sp|PSB_METBU|PROTEASOME subunit beta|Methanococcoides burtonii (strain DSM 6242

Query: 1 FNNMLSGQ 8
+NMLSGQ
Sbjct: 92 LSNMLSGQ 99


>sp|IF2G_NATPD|TRANSLATION initiation factor 2 subunit|Natronomonas pharaonis (strain ATCC

Query: 5 LSGQWT 10
LSG+WT
Sbjct: 29 LSGEWT 34


>sp|IF2G_HALSA|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 5 LSGQWT 10
LSG+WT
Sbjct: 29 LSGEWT 34


>sp|IF2G_HALS3|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 5 LSGQWT 10
LSG+WT
Sbjct: 29 LSGEWT 34


>sp|IF2G_HALMA|TRANSLATION initiation factor 2 subunit|Haloarcula marismortui (strain ATCC

Query: 5 LSGQWT 10
LSG+WT
Sbjct: 28 LSGEWT 33


>sp|OFOB2_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit beta|Aeropyrum pernix (strain ATCC 700893

Query: 1 FNNMLSGQW 9
+NN+++ +W
Sbjct: 203 YNNIMTNKW 211


>sp|SRP54_METS3|SIGNAL recognition particle 54 kDa|Methanobrevibacter smithii (strain ATCC

Query: 3 NMLSGQWT 10
NM+SG++T
Sbjct: 318 NMMSGKFT 325


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 LSGQWT 10
LSG WT
Sbjct: 907 LSGNWT 912


>sp|IF2G_HALWD|TRANSLATION initiation factor 2 subunit|Haloquadratum walsbyi (strain DSM

Query: 5 LSGQWT 10
LSG WT
Sbjct: 29 LSGSWT 34


>sp|IF2G_HALLT|TRANSLATION initiation factor 2 subunit|Halorubrum lacusprofundi (strain ATCC

Query: 5 LSGQWT 10
LSG WT
Sbjct: 29 LSGSWT 34




17|Sequence|81|90|SGQWTMTNTT

>sp|COFG_METJA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 QWTMTNTT 10
+WT+ NT+
Sbjct: 121 EWTLNNTS 128


>sp|RNZ_THEON|RIBONUCLEASE Z|Thermococcus onnurineus (strain NA1)

Query: 1 SGQWTMTN 8
SG+W M N
Sbjct: 298 SGRWEMRN 305


>sp|GGR_METAR|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanocella arvoryzae (strain DSM 22066

Query: 2 GQWTMTNTT 10
G+W NTT
Sbjct: 163 GRWAGINTT 171


>sp|GCH3_METTH|GTP cyclohydrolase III|Methanothermobacter thermautotrophicus (strain

Query: 2 GQWTMTNT 9
G WT+T T
Sbjct: 13 GPWTVTPT 20


>sp|HUTU_THEVO|PROBABLE urocanate hydratase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SGQWTMTN 8
SG+W +T+
Sbjct: 163 SGKWVLTS 170


>sp|HUTU_THEAC|PROBABLE urocanate hydratase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SGQWTMTN 8
SG+W +T+
Sbjct: 163 SGKWVLTS 170




18|Sequence|86|95|MTNTTNQYSS

>sp|PYRF_HALLT|OROTIDINE 5'-phosphate decarboxylase|Halorubrum lacusprofundi (strain ATCC

Query: 3 NTTNQYSS 10
NTT QY++
Sbjct: 99 NTTRQYAA 106




19|Sequence|91|100|NQYSSLMIMM

>sp|CAPPA_METBF|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 NQYSSLMIMM 10
NQ+ LM+MM
Sbjct: 90 NQFRQLMVMM 99




20|Sequence|96|105|LMIMMAMAMK

***** No hits found ******


21|Sequence|101|110|AMAMKLGMAP

>sp|PPM_THEKO|PHOSPHOPENTOMUTASE kodakarensis (strain ATCC BAA-918

Query: 2 MAMKLGMA 9
+AMK+GMA
Sbjct: 21 LAMKVGMA 28


>sp|TDXH_PYRHO|PEROXIREDOXIN horikoshii (strain ATCC 700860

Query: 2 MAMKLGMAP 10
+A KLGM P
Sbjct: 105 LAEKLGMIP 113


>sp|TDXH_PYRFU|PEROXIREDOXIN furiosus (strain ATCC 43587

Query: 2 MAMKLGMAP 10
+A KLGM P
Sbjct: 105 LAEKLGMIP 113


>sp|TDXH_PYRAB|PEROXIREDOXIN abyssi (strain GE5 /

Query: 2 MAMKLGMAP 10
+A KLGM P
Sbjct: 105 LAEKLGMIP 113


>sp|DOXD_ACIAM|THIOSULFATE dehydrogenase [quinone] large subunit|Acidianus ambivalens

Query: 1 AMAMKLGMAP 10
A+AM +G AP
Sbjct: 114 ALAMSVGFAP 123




22|Sequence|106|115|LGMAPFHFWV

>sp|ATGT_KORCO|TRNA-GUANINE(15) transglycosylase|Korarchaeum cryptofilum (strain OPF8)

Query: 5 PFHFW 9
PFHFW
Sbjct: 224 PFHFW 228


>sp|PURL_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GMAPFHFWV 10
GMAP+ W+
Sbjct: 335 GMAPWEIWI 343


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 PFHFWV 10
PF FWV
Sbjct: 407 PFPFWV 412


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 5 PFHFWV 10
PF FWV
Sbjct: 407 PFPFWV 412


>sp|Y79B_METJA|UNCHARACTERIZED protein MJ0795.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GMAPFHFWV 10
G+ PF+F++
Sbjct: 3 GINPFYFYI 11


>sp|UPPS_AERPE|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Aeropyrum pernix

Query: 3 MAPFHF 8
+AP+HF
Sbjct: 115 LAPYHF 120


>sp|HIS8_HALVD|HISTIDINOL-PHOSPHATE aminotransferase|Haloferax volcanii (strain ATCC 29605

Query: 2 GMAPFHFWV 10
G+AP WV
Sbjct: 79 GLAPEQVWV 87


>sp|ASNH2_METJA|PUTATIVE asparagine synthetase [glutamine-hydrolyzing] 2|Methanocaldococcus

Query: 1 LGMAPFHFW 9
LG+ PF+++
Sbjct: 156 LGVKPFYYY 164


>sp|FPON_METMA|F(420)H(2) dehydrogenase subunit N|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LGMAPFHFW 9
+ + PFH W
Sbjct: 222 MALVPFHMW 230


>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 GMAPFHFWV 10
G A FH WV
Sbjct: 437 GSARFHDWV 445


>sp|Y3407_METJA|UNCHARACTERIZED protein MJECS07|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GMAPFHFWV 10
G FH W+
Sbjct: 153 GSKGFHIWI 161


>sp|Y678_METJA|UNCHARACTERIZED protein MJ0678|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GMAPFHFW 9
G++P+ +W
Sbjct: 283 GISPYRWW 290




23|Sequence|111|120|FHFWVPEVTQ

>sp|Y400_METMA|UPF0228 protein MM_0400|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FHFWVPE 7
F +W+PE
Sbjct: 100 FRYWIPE 106


>sp|FPON_METMA|F(420)H(2) dehydrogenase subunit N|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FHFWVPEVTQ 10
FH W P+ Q
Sbjct: 227 FHMWAPDTYQ 236


>sp|SLAA_SACS2|S-LAYER protein A|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FHFWVPEVT 9
FH W P T
Sbjct: 541 FHIWGPSAT 549


>sp|CYAS_METMA|CYSTEATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FHFWVP 6
FH W+P
Sbjct: 50 FHSWLP 55


>sp|CYAS_METBF|CYSTEATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 FHFWVP 6
FH W+P
Sbjct: 50 FHSWLP 55


>sp|CYAS_METAC|CYSTEATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 FHFWVP 6
FH W+P
Sbjct: 50 FHSWLP 55


>sp|Y694_METJA|UNCHARACTERIZED NOP5 family protein MJ0694|Methanocaldococcus jannaschii (strain

Query: 2 HFWVPEVTQ 10
H+W E+T+
Sbjct: 104 HYWSTELTK 112


>sp|FPOM_METMA|F(420)H(2) dehydrogenase subunit M|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FHFWVPE 7
FH W+P+
Sbjct: 232 FHSWLPD 238


>sp|HELS_METB6|ATP-DEPENDENT DNA helicase Hel308|Methanoregula boonei (strain DSM 21154

Query: 4 WVPEVT 9
W+P++T
Sbjct: 131 WIPDIT 136


>sp|KDPA_METB6|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Methanoregula boonei (strain DSM

Query: 1 FHFWVPEVT 9
+ F+VPE T
Sbjct: 119 WQFYVPETT 127


>sp|Y1498_SULAC|PARB-LIKE protein Saci_1498|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FHFWVPE 7
+HF++P+
Sbjct: 185 YHFYIPK 191




24|Sequence|116|125|PEVTQGTPLT

>sp|SYE_METBF|GLUTAMATE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PEVTQGTPLT 10
PE+ +G P T
Sbjct: 58 PEIAKGNPET 67


>sp|NUOCD_HALVD|NADH-QUINONE oxidoreductase subunit C/D|Haloferax volcanii (strain ATCC 29605

Query: 1 PEVTQGTPL 9
PE QG PL
Sbjct: 145 PETWQGHPL 153


>sp|GCSPA_HALSA|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Halobacterium

Query: 1 PEVTQG 6
PE+TQG
Sbjct: 101 PEITQG 106


>sp|GCSPA_HALS3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Halobacterium

Query: 1 PEVTQG 6
PE+TQG
Sbjct: 101 PEITQG 106


>sp|AATE_THEON|A-TYPE ATP synthase subunit E|Thermococcus onnurineus (strain NA1)

Query: 2 EVTQGTPLT 10
EVT G P+T
Sbjct: 154 EVTLGEPIT 162


>sp|CDC6M_HALMA|ORC1-TYPE DNA replication protein 13|Haloarcula marismortui (strain ATCC

Query: 2 EVTQGTPLT 10
E+ +GTPL+
Sbjct: 312 EMVKGTPLS 320


>sp|HPRT_METFV|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanothermus fervidus (strain ATCC

Query: 3 VTQGTPLT 10
VT G PLT
Sbjct: 27 VTDGIPLT 34




25|Sequence|121|130|GTPLTSGLLL

>sp|CDC6M_HALMA|ORC1-TYPE DNA replication protein 13|Haloarcula marismortui (strain ATCC

Query: 1 GTPLTSGLLL 10
GTPL+ LLL
Sbjct: 316 GTPLSGKLLL 325


>sp|COFG_HALSA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GTPLTSGLLL 10
G P T+G+L+
Sbjct: 194 GVPFTTGILV 203


>sp|COFG_HALS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 GTPLTSGLLL 10
G P T+G+L+
Sbjct: 194 GVPFTTGILV 203


>sp|COFG_HALMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GTPLTSGLLL 10
G P T+G+L+
Sbjct: 191 GVPFTTGILV 200


>sp|RS12_NANEQ|SMALL ribosomal subunit protein uS12|Nanoarchaeum equitans (strain

Query: 1 GTPLTSGLLL 10
G P+ SG++L
Sbjct: 42 GAPMASGIVL 51


>sp|Y1289_ARCFU|PUTATIVE GTPase AF_1289|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GTPLTSGLLL 10
G+P T G LL
Sbjct: 85 GSPFTGGALL 94


>sp|RL11_METTP|LARGE ribosomal subunit protein uL11|Methanothrix thermoacetophila

Query: 1 GTPLTSGLLL 10
GTP TS LLL
Sbjct: 67 GTPPTSALLL 76


>sp|TRUD_PYRHO|PROBABLE tRNA pseudouridine synthase D|Pyrococcus horikoshii (strain ATCC

Query: 1 GTPLTSGLLL 10
G PL GLLL
Sbjct: 115 GRPLKLGLLL 124


>sp|TRI_THEVO|TRICORN protease|Thermoplasma volcanium (strain ATCC 51530

Query: 2 TPLTSGLLL 10
TPL G+LL
Sbjct: 549 TPLKDGVLL 557


>sp|COFG_METB6|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanoregula boonei (strain DSM 21154

Query: 3 PLTSGLLL 10
P T+GLLL
Sbjct: 162 PFTTGLLL 169


>sp|UPP_METS5|URACIL phosphoribosyltransferase|Metallosphaera sedula (strain ATCC

Query: 1 GTPLTSGLL 9
TPL GLL
Sbjct: 82 ATPLVEGLL 90


>sp|AATB_HYPBU|A-TYPE ATP synthase subunit B|Hyperthermus butylicus (strain DSM 5456

Query: 1 GTPLTSGL 8
G P+TSG+
Sbjct: 109 GPPITSGV 116


>sp|COFG_METAC|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PLTSGLLL 10
P TSGLL+
Sbjct: 153 PYTSGLLI 160




26|Sequence|126|135|SGLLLLTWQK

>sp|Y953_METJA|UNCHARACTERIZED protein MJ0953|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SGLLLLTW 8
+GL+LL+W
Sbjct: 48 TGLVLLSW 55




27|Sequence|131|140|LTWQKLAPIS

>sp|Y1350_METJA|UNCHARACTERIZED protein MJ1350|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WQKLAPIS 10
W K+APIS
Sbjct: 241 WTKIAPIS 248


>sp|ILVE_METTH|PUTATIVE branched-chain-amino-acid aminotransferase|Methanothermobacter

Query: 2 TWQKLAP 8
TW+++AP
Sbjct: 145 TWRRMAP 151


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 2 TWQKLAPIS 10
TW+ L P S
Sbjct: 541 TWKTLPPFS 549


>sp|RL2_CALMQ|LARGE ribosomal subunit protein uL2|Caldivirga maquilingensis (strain

Query: 2 TWQKLAPI 9
+W+++AP+
Sbjct: 21 SWRRIAPL 28


>sp|PUS10_NITMS|TRNA pseudouridine synthase Pus10|Nitrosopumilus maritimus (strain

Query: 2 TWQKLAPIS 10
T+QK+ PI+
Sbjct: 3 TYQKIIPIA 11


>sp|NADM_THESM|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Thermococcus sibiricus (strain DSM 12597

Query: 2 TWQKLAPIS 10
TW++L P S
Sbjct: 141 TWEELVPKS 149




28|Sequence|136|145|LAPISIMYQI

>sp|SYK_PYRHO|LYSINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 APISIMYQ 9
AP+S+MY+
Sbjct: 262 APLSLMYE 269


>sp|SYK_PYRAB|LYSINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 APISIMYQ 9
AP+S+MY+
Sbjct: 262 APMSLMYE 269


>sp|SYK_THEKO|LYSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 APISIMYQ 9
AP+++MY+
Sbjct: 263 APLTLMYE 270


>sp|SYK_PYRFU|LYSINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 APISIMYQ 9
AP+++MY+
Sbjct: 262 APLTLMYE 269




29|Sequence|141|150|IMYQISPSLN

>sp|RFCL_THEPD|REPLICATION factor C large subunit|Thermofilum pendens (strain DSM 2475

Query: 1 IMYQISPSL 9
I+YQ PSL
Sbjct: 276 IVYQYEPSL 284




30|Sequence|146|155|SPSLNVSLLL

>sp|UREG_CENSY|UREASE accessory protein UreG|Cenarchaeum symbiosum (strain A)

Query: 2 PSLNVSLL 9
PS+N+S++
Sbjct: 84 PSMNISII 91




31|Sequence|151|160|VSLLLTLSIL

***** No hits found ******


32|Sequence|156|165|TLSILSIMAG

>sp|TMCA_AERPE|TRNA(MET) cytidine acetyltransferase TmcA|Aeropyrum pernix (strain ATCC

Query: 2 LSILSIMAG 10
LS+ S+MAG
Sbjct: 248 LSVQSVMAG 256


>sp|LHRC_METTH|ATP-DEPENDENT helicase Lhr-Core|Methanothermobacter thermautotrophicus (strain

Query: 2 LSILSIMAG 10
LS+LS +AG
Sbjct: 463 LSVLSYLAG 471




33|Sequence|161|170|SIMAGSWGGL

>sp|KORA_METJA|2-OXOGLUTARATE synthase subunit KorA|Methanocaldococcus jannaschii (strain ATCC

Query: 1 SIMAGSWGGL 10
+++ SWGGL
Sbjct: 62 AVIGASWGGL 71


>sp|GAPN_THETE|NAD(P)-DEPENDENT glyceraldehyde-3-phosphate dehydrogenase|Thermoproteus tenax

Query: 1 SIMAGSWGG 9
S +AG WGG
Sbjct: 21 SYLAGEWGG 29


>sp|CDC6_DESA1|ORC1-TYPE DNA replication protein|Desulfurococcus amylolyticus (strain DSM

Query: 6 SWGGL 10
SWGGL
Sbjct: 140 SWGGL 144


>sp|FDHB1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 2 IMAGSWG 8
I AG+WG
Sbjct: 199 IAAGNWG 205


>sp|RUVB_METB6|HOLLIDAY junction branch migration complex|Methanoregula boonei (strain DSM

Query: 1 SIMAGSWGG 9
S++AG +GG
Sbjct: 267 SVIAGDFGG 275


>sp|Y1468_METJA|UNCHARACTERIZED protein MJ1468|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 MAGSWG 8
M+G+WG
Sbjct: 318 MSGAWG 323


>sp|AATI_THEAC|A-TYPE ATP synthase subunit I|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 IMAGSWG 8
+M G WG
Sbjct: 343 LMVGDWG 349


>sp|DTDA_THEKO|D-AMINOACYL-TRNA deacylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 MAGSWGG 9
+ G+WGG
Sbjct: 93 VTGNWGG 99


>sp|Y1375_METJA|UNCHARACTERIZED membrane protein MJ1375|Methanocaldococcus jannaschii (strain ATCC

Query: 1 SIMAGSWGGL 10
SIM G W G+
Sbjct: 247 SIMGGFWSGI 256


>sp|P538_METTH|PROTEIN MTH_538|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 IMAGSWG 8
++AG WG
Sbjct: 44 VLAGLWG 50




34|Sequence|166|175|SWGGLNQTQL

>sp|CDC6_DESA1|ORC1-TYPE DNA replication protein|Desulfurococcus amylolyticus (strain DSM

Query: 1 SWGGLN 6
SWGGL+
Sbjct: 140 SWGGLH 145


>sp|OFOA2_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit alpha|Sulfurisphaera tokodaii (strain DSM

Query: 1 SWGGLNQ 7
SW G+N+
Sbjct: 328 SWAGMNE 334


>sp|CSM3_METJA|CRISPR system Cms endoribonuclease Csm3|Methanocaldococcus jannaschii

Query: 2 WGGLN 6
WGG+N
Sbjct: 242 WGGIN 246


>sp|GLNA_HALSA|GLUTAMINE synthetase|Halobacterium salinarum (strain ATCC 700922

Query: 1 SWGGLNQTQL 10
+W G+N++ L
Sbjct: 320 AWSGVNRSAL 329


>sp|SIHH_METMA|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SWGGLNQT 8
+W G+N+T
Sbjct: 189 AWDGINRT 196


>sp|SIHH_METAC|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SWGGLNQT 8
+W G+N+T
Sbjct: 189 AWDGINRT 196




35|Sequence|171|180|NQTQLRKILA

>sp|TRUB_META3|PROBABLE tRNA pseudouridine synthase B|Methanococcus aeolicus (strain ATCC

Query: 1 NQTQLRKIL 9
++T+LRKI+
Sbjct: 215 DETELRKII 223




36|Sequence|176|185|RKILAYSSIT

>sp|RPIA_KORCO|RIBOSE-5-PHOSPHATE isomerase A|Korarchaeum cryptofilum (strain OPF8)

Query: 2 KILAYSSIT 10
K+LAY+S T
Sbjct: 103 KVLAYNSST 111


>sp|DIPPS_PYRFU|BIFUNCTIONAL IPC transferase and DIPP|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RKILAYSSI 9
RK++ YSS+
Sbjct: 223 RKLIVYSSV 231




37|Sequence|181|190|YSSITHMGWM

>sp|FPOM_METMA|F(420)H(2) dehydrogenase subunit M|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YSSITHMGWM 10
YSS++HMG++
Sbjct: 309 YSSLSHMGYV 318


>sp|SYY_AERPE|TYROSINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 SSITHMGWM 10
S + H+GW+
Sbjct: 45 SGVAHIGWL 53


>sp|HIS51_METMP|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 4 ITHMGW 9
I HMGW
Sbjct: 117 IPHMGW 122


>sp|HIS5_HALMA|IMIDAZOLE glycerol phosphate synthase subunit|Haloarcula marismortui (strain

Query: 3 SITHMGW 9
++ HMGW
Sbjct: 124 TVPHMGW 130


>sp|HIS52_METMP|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 4 ITHMGW 9
I HMGW
Sbjct: 116 IPHMGW 121


>sp|HIS5_METTH|IMIDAZOLE glycerol phosphate synthase subunit|Methanothermobacter

Query: 2 SSITHMGW 9
+ + HMGW
Sbjct: 110 NKVPHMGW 117


>sp|SPEE_PYRNV|POLYAMINE aminopropyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 YSSITHMGWM 10
YS TH+G M
Sbjct: 271 YSGRTHLGLM 280


>sp|HIS5_NATPD|IMIDAZOLE glycerol phosphate synthase subunit|Natronomonas pharaonis (strain

Query: 4 ITHMGW 9
+ HMGW
Sbjct: 125 VPHMGW 130


>sp|HIS5_METAC|IMIDAZOLE glycerol phosphate synthase subunit|Methanosarcina acetivorans

Query: 4 ITHMGW 9
+ HMGW
Sbjct: 115 VPHMGW 120


>sp|HIS5_HALSA|IMIDAZOLE glycerol phosphate synthase subunit|Halobacterium salinarum (strain

Query: 4 ITHMGW 9
+ HMGW
Sbjct: 128 VPHMGW 133


>sp|HIS5_ARCFU|IMIDAZOLE glycerol phosphate synthase subunit|Archaeoglobus fulgidus (strain

Query: 4 ITHMGW 9
+ HMGW
Sbjct: 110 VPHMGW 115


>sp|SYE_METTP|GLUTAMATE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 6 HMGWM 10
HMGW+
Sbjct: 317 HMGWV 321


>sp|SPEE_PYRIL|POLYAMINE aminopropyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 YSSITHMGWM 10
YS TH+G M
Sbjct: 271 YSGKTHVGLM 280


>sp|HIS5_METJA|IMIDAZOLE glycerol phosphate synthase subunit|Methanocaldococcus jannaschii

Query: 4 ITHMGW 9
+ HMGW
Sbjct: 111 LPHMGW 116


>sp|SYE_THEPD|GLUTAMATE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 6 HMGW 9
HMGW
Sbjct: 322 HMGW 325


>sp|SYE_STAMF|GLUTAMATE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 6 HMGW 9
HMGW
Sbjct: 306 HMGW 309


>sp|SYE_METS3|GLUTAMATE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 6 HMGW 9
HMGW
Sbjct: 309 HMGW 312


>sp|HIS5_METKA|IMIDAZOLE glycerol phosphate synthase subunit|Methanopyrus kandleri (strain

Query: 6 HMGW 9
HMGW
Sbjct: 116 HMGW 119


>sp|HIS5_PICTO|IMIDAZOLE glycerol phosphate synthase subunit|Picrophilus torridus (strain

Query: 6 HMGW 9
HMGW
Sbjct: 105 HMGW 108




38|Sequence|186|195|HMGWMMAVLP

>sp|OGT_PYRAE|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 HMGWMMAVLP 10
H+GW+MA P
Sbjct: 74 HVGWLMARNP 83


>sp|GAPOR_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE:FERREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HMGWMMAVL 9
H GWM VL
Sbjct: 552 HRGWMKKVL 560


>sp|APGM2_ARCFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 MGWMMAVLP 10
MGW +LP
Sbjct: 185 MGWSAEILP 193


>sp|Y2543_HALSA|PROTEIN VNG_2543C|Halobacterium salinarum (strain ATCC 700922

Query: 3 GWMMAVLP 10
GWM LP
Sbjct: 148 GWMYPTLP 155


>sp|DTDA_METPE|D-AMINOACYL-TRNA deacylase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 GWMMAVL 9
GWM AVL
Sbjct: 102 GWMQAVL 108


>sp|SYE_IGNH4|GLUTAMATE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 HMGWMM 6
H+GW M
Sbjct: 317 HLGWTM 322


>sp|ENDA_THEGJ|TRNA-SPLICING endonuclease|Thermococcus gammatolerans (strain DSM 15229

Query: 1 HMGWMMAVLP 10
H W++ VLP
Sbjct: 114 HSQWLVWVLP 123


>sp|AGL3_SULAC|UDP-SULFOQUINOVOSE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 HMGWMMAV 8
H+GW +A+
Sbjct: 11 HLGWPLAL 18


>sp|PGK_SULTO|PHOSPHOGLYCERATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 HMGWMM 6
HM W+M
Sbjct: 405 HMSWVM 410


>sp|SYE_METTP|GLUTAMATE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 HMGWM 5
HMGW+
Sbjct: 317 HMGWV 321


>sp|AGLS_HALVD|DOLICHOL phosphate-mannose mannosyltransferase|Haloferax volcanii (strain

Query: 1 HMGWMM 6
H+GWM+
Sbjct: 49 HIGWMV 54


>sp|UPPP_METTP|UNDECAPRENYL-DIPHOSPHATASE thermoacetophila (strain DSM 6194

Query: 1 HMGWMMAVL 9
H G M+AVL
Sbjct: 50 HTGTMLAVL 58




39|Sequence|191|200|MAVLPYNPNM

>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 MAVLPYNPNM 10
+AV PYNPN+
Sbjct: 766 LAVRPYNPNV 775


>sp|AKSA_METJA|HOMOCITRATE synthase AksA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 AVLPYNPNM 10
AV PYNP +
Sbjct: 19 AVCPYNPKL 27


>sp|SERK_THEKO|ADP-DEPENDENT L-serine kinase SerK|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 VLPYNPN 9
VLP+NP+
Sbjct: 226 VLPFNPD 232


>sp|Y1266_METJA|UNCHARACTERIZED protein MJ1266|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LPYNPNM 10
+PY+PN+
Sbjct: 212 IPYDPNI 218


>sp|PSB2_IGNH4|PROTEASOME subunit beta 2|Ignicoccus hospitalis (strain KIN4/I /

Query: 6 YNPNM 10
YNPNM
Sbjct: 155 YNPNM 159


>sp|G3PP_PYRAB|GLYCERALDEHYDE 3-phosphate phosphatase|Pyrococcus abyssi (strain GE5 /

Query: 4 LPYNP 8
LPYNP
Sbjct: 71 LPYNP 75


>sp|HUTI_HALSA|IMIDAZOLONEPROPIONASE salinarum (strain ATCC 700922

Query: 4 LPYNPNM 10
LPYNP +
Sbjct: 392 LPYNPGV 398


>sp|HUTI_HALS3|IMIDAZOLONEPROPIONASE salinarum (strain ATCC 29341

Query: 4 LPYNPNM 10
LPYNP +
Sbjct: 392 LPYNPGV 398


>sp|G3PP_PYRHO|GLYCERALDEHYDE 3-phosphate phosphatase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 LPYNP 8
LPYNP
Sbjct: 71 LPYNP 75


>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 MAVLPYNPNM 10
+A+ PYN N+
Sbjct: 772 LALRPYNSNI 781


>sp|APGM1_METJA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanocaldococcus jannaschii (strain

Query: 1 MAVLPYNP 8
+A+L YNP
Sbjct: 62 LAILGYNP 69


>sp|SYE_SULTO|GLUTAMATE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 AVLPYNPN 9
A +PYNP+
Sbjct: 430 AKIPYNPS 437


>sp|RL15E_NANEQ|LARGE ribosomal subunit protein eL15|Nanoarchaeum equitans (strain

Query: 3 VLPYNPNM 10
V P+NPN+
Sbjct: 131 VDPFNPNI 138


>sp|CARB_SACI7|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 MAVLPYNP 8
+AVL YNP
Sbjct: 590 VAVLNYNP 597


>sp|CARB_SACI4|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 MAVLPYNP 8
+AVL YNP
Sbjct: 590 VAVLNYNP 597


>sp|CARB_SACI3|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 MAVLPYNP 8
+AVL YNP
Sbjct: 590 VAVLNYNP 597


>sp|CARB_SACI2|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 MAVLPYNP 8
+AVL YNP
Sbjct: 590 VAVLNYNP 597


>sp|CARB_SACI1|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 MAVLPYNP 8
+AVL YNP
Sbjct: 590 VAVLNYNP 597


>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 MAVLPYNPNM 10
M + PYN N+
Sbjct: 719 MLISPYNKNI 728


>sp|CARB_SACI6|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 MAVLPYNP 8
+AVL YNP
Sbjct: 590 VAVLNYNP 597


>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 1 MAVLPYNP 8
+AVL YNP
Sbjct: 590 VAVLNYNP 597


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 1 MAVLPYNP 8
+A+L YNP
Sbjct: 591 IAILNYNP 598


>sp|PYLC_METBF|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 AVLPYNPNM 10
AVLP N N+
Sbjct: 66 AVLPVNENL 74


>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 1 MAVLPYNP 8
+A+L YNP
Sbjct: 576 VAILNYNP 583


>sp|PYLC_METAC|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 AVLPYNPNM 10
A+LP N N+
Sbjct: 66 AILPVNENL 74




40|Sequence|196|205|YNPNMTILNL

>sp|IF2B_SACS2|TRANSLATION initiation factor 2 subunit|Saccharolobus solfataricus (strain

Query: 3 PNMTILNL 10
PNM ILN+
Sbjct: 31 PNMIILNI 38


>sp|PURQ_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 NPNMTILNL 10
NPN ++LN+
Sbjct: 172 NPNGSVLNI 180


>sp|PURQ_PYRFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Pyrococcus furiosus (strain ATCC 43587

Query: 2 NPNMTILNL 10
NPN ++LN+
Sbjct: 172 NPNGSVLNI 180


>sp|AROE_METS3|SHIKIMATE dehydrogenase (NADP(+))|Methanobrevibacter smithii (strain ATCC

Query: 1 YNPNMTIL 8
YNPN T+L
Sbjct: 225 YNPNETVL 232


>sp|PURQ_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Thermococcus kodakarensis (strain ATCC

Query: 2 NPNMTILNL 10
NPN ++LN+
Sbjct: 172 NPNGSLLNI 180


>sp|RL15E_THEAC|LARGE ribosomal subunit protein eL15|Thermoplasma acidophilum (strain

Query: 3 PNMTILN 9
PNM +LN
Sbjct: 112 PNMEVLN 118


>sp|RL15E_PICTO|LARGE ribosomal subunit protein eL15|Picrophilus torridus (strain ATCC

Query: 3 PNMTILN 9
PNM +LN
Sbjct: 110 PNMEVLN 116


>sp|RL15E_METTH|LARGE ribosomal subunit protein eL15|Methanothermobacter

Query: 3 PNMTILN 9
PNM +LN
Sbjct: 108 PNMEVLN 114


>sp|RL15E_METMP|LARGE ribosomal subunit protein eL15|Methanococcus maripaludis (strain

Query: 3 PNMTILN 9
PNM +LN
Sbjct: 109 PNMEVLN 115


>sp|RL15E_METM5|LARGE ribosomal subunit protein eL15|Methanococcus maripaludis (strain C5

Query: 3 PNMTILN 9
PNM +LN
Sbjct: 109 PNMEVLN 115


>sp|RL15E_METLZ|LARGE ribosomal subunit protein eL15|Methanocorpusculum labreanum (strain

Query: 3 PNMTILN 9
PNM +LN
Sbjct: 111 PNMEVLN 117


>sp|RL15E_METJA|LARGE ribosomal subunit protein eL15|Methanocaldococcus jannaschii

Query: 3 PNMTILN 9
PNM +LN
Sbjct: 109 PNMEVLN 115


>sp|RL15E_METHJ|LARGE ribosomal subunit protein eL15|Methanospirillum hungatei JF-1

Query: 3 PNMTILN 9
PNM +LN
Sbjct: 111 PNMEVLN 117


>sp|RL15E_METBU|LARGE ribosomal subunit protein eL15|Methanococcoides burtonii (strain

Query: 3 PNMTILN 9
PNM +LN
Sbjct: 111 PNMEVLN 117


>sp|RL15E_METB6|LARGE ribosomal subunit protein eL15|Methanoregula boonei (strain DSM

Query: 3 PNMTILN 9
PNM +LN
Sbjct: 111 PNMEVLN 117


>sp|RL15E_METAR|LARGE ribosomal subunit protein eL15|Methanocella arvoryzae (strain DSM

Query: 3 PNMTILN 9
PNM +LN
Sbjct: 111 PNMEVLN 117


>sp|RL15E_ARCFU|LARGE ribosomal subunit protein eL15|Archaeoglobus fulgidus (strain ATCC

Query: 3 PNMTILN 9
PNM +LN
Sbjct: 110 PNMEVLN 116


>sp|RNH2_METST|RIBONUCLEASE HII|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 NPNMTIL 8
NPNMT++
Sbjct: 128 NPNMTVV 134


>sp|AROE_METTH|SHIKIMATE dehydrogenase (NADP(+))|Methanothermobacter thermautotrophicus

Query: 1 YNPNMTIL 8
YNP T+L
Sbjct: 226 YNPQRTVL 233


>sp|PSB1_SACI9|PROTEASOME subunit beta 1|Saccharolobus islandicus (strain L.D.8.5 /

Query: 1 YNPNMTI 7
YNP MT+
Sbjct: 159 YNPKMTL 165


>sp|PSB1_SACI7|PROTEASOME subunit beta 1|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 YNPNMTI 7
YNP MT+
Sbjct: 159 YNPKMTL 165


>sp|PSB1_SACI6|PROTEASOME subunit beta 1|Saccharolobus islandicus (strain M.16.4 /

Query: 1 YNPNMTI 7
YNP MT+
Sbjct: 159 YNPKMTL 165


>sp|PSB1_SACI4|PROTEASOME subunit beta 1|Saccharolobus islandicus (strain M.14.25 /

Query: 1 YNPNMTI 7
YNP MT+
Sbjct: 159 YNPKMTL 165


>sp|PSB1_SACI3|PROTEASOME subunit beta 1|Saccharolobus islandicus (strain M.16.27)

Query: 1 YNPNMTI 7
YNP MT+
Sbjct: 159 YNPKMTL 165


>sp|PSB1_SACI2|PROTEASOME subunit beta 1|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 YNPNMTI 7
YNP MT+
Sbjct: 159 YNPKMTL 165


>sp|PSB2_SACS2|PROTEASOME subunit beta 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YNPNMTI 7
YNP MT+
Sbjct: 156 YNPKMTL 162


>sp|HIS6_METMA|IMIDAZOLE glycerol phosphate synthase subunit|Methanosarcina mazei (strain

Query: 2 NPNMTILNL 10
NP+ TIL L
Sbjct: 144 NPDKTILEL 152


>sp|HIS6_METBF|IMIDAZOLE glycerol phosphate synthase subunit|Methanosarcina barkeri (strain

Query: 2 NPNMTILNL 10
NP+ TIL L
Sbjct: 144 NPDKTILEL 152


>sp|PURQ_PYRAB|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Pyrococcus abyssi (strain GE5 /

Query: 2 NPNMTILNL 10
NPN +++N+
Sbjct: 172 NPNGSVMNI 180


>sp|PURQ_PICTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Picrophilus torridus (strain ATCC 700027

Query: 1 YNPNMTILNL 10
+NPN +I+N+
Sbjct: 190 WNPNGSIMNI 199


>sp|PSB2_SACS9|PROTEASOME subunit beta 2|Saccharolobus solfataricus (strain 98/2) (Sulfolobus

Query: 1 YNPNMTI 7
YNP MT+
Sbjct: 159 YNPKMTL 165


>sp|PURQ_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 NPNMTILNL 10
NPN ++LN+
Sbjct: 172 NPNGSLLNI 180


>sp|OTC_METS3|ORNITHINE carbamoyltransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 YNPNMTILNL 10
Y PN I+N+
Sbjct: 180 YEPNEDIVNM 189


>sp|PSB2_SACI1|PROTEASOME subunit beta 2|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 YNPNMTI 7
YNP MT+
Sbjct: 159 YNPKMTL 165




41|Sequence|201|210|TILNLTIYII

***** No hits found ******


42|Sequence|206|215|TIYIILTTTA

>sp|HISX_SULAC|HISTIDINOL dehydrogenase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 TIYIILTTTA 10
T YIIL TT+
Sbjct: 245 TSYIILVTTS 254




43|Sequence|211|220|LTTTAFLLLN

>sp|MOAA_METS5|PROBABLE GTP 3',8-cyclase|Metallosphaera sedula (strain ATCC 51363

Query: 1 LTTTAFLLLN 10
+TT FLL N
Sbjct: 90 MTTNGFLLAN 99


>sp|REG9_PYRAB|UNCHARACTERIZED HTH-type transcriptional regulator PYRAB16920|Pyrococcus abyssi

Query: 1 LTTTAFLLL 9
L TTAF+L+
Sbjct: 65 LGTTAFILI 73


>sp|REG9_PYRHO|UNCHARACTERIZED HTH-type transcriptional regulator PH1916|Pyrococcus horikoshii

Query: 1 LTTTAFLLL 9
L TTAF+L+
Sbjct: 65 LGTTAFILI 73


>sp|ARGC_METB6|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanoregula boonei (strain DSM 21154

Query: 1 LTTTAFLLLN 10
+ TTA +LLN
Sbjct: 230 ILTTAHILLN 239




44|Sequence|216|225|FLLLNLNSST

***** No hits found ******


45|Sequence|221|230|LNSSTTTLLL

>sp|RFCL_METLZ|REPLICATION factor C large subunit|Methanocorpusculum labreanum (strain ATCC

Query: 2 NSSTTTLLL 10
NSSTTT L
Sbjct: 84 NSSTTTSLF 92




46|Sequence|226|235|TTLLLSRTWN

>sp|TMCA_AERPE|TRNA(MET) cytidine acetyltransferase TmcA|Aeropyrum pernix (strain ATCC

Query: 1 TTLLLSRTWN 10
+TLL +R+WN
Sbjct: 648 STLLATRSWN 657


>sp|NADE_SULTO|NH(3)-DEPENDENT NAD(+) synthetase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 TTLLLSRTWN 10
TT+LLSR N
Sbjct: 50 TTILLSRATN 59


>sp|QUEC_SACS2|7-CYANO-7-DEAZAGUANINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LLLSRTWN 10
LLL +TW+
Sbjct: 137 LLLDKTWD 144


>sp|SYV_SULTO|VALINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 LLLSRTWN 10
LLL + WN
Sbjct: 594 LLLQKLWN 601




47|Sequence|231|240|SRTWNKLTWL

>sp|IF6_PICTO|TRANSLATION initiation factor 6|Picrophilus torridus (strain ATCC 700027

Query: 1 SRTWNKLTWL 10
+RTWN +T+L
Sbjct: 17 ARTWNDVTFL 26


>sp|ACDB2_METTE|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 4 WNKLTWL 10
WN++ WL
Sbjct: 347 WNRVVWL 353


>sp|ACDB2_METMA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina mazei

Query: 4 WNKLTWL 10
WN++ WL
Sbjct: 348 WNRVVWL 354


>sp|ACDB2_METAC|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 4 WNKLTWL 10
WN++ WL
Sbjct: 347 WNRVVWL 353


>sp|ACDB1_METTE|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 4 WNKLTWL 10
WN++ WL
Sbjct: 347 WNRVVWL 353


>sp|ACDB1_METMA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina mazei

Query: 4 WNKLTWL 10
WN++ WL
Sbjct: 347 WNRVVWL 353


>sp|ACDB1_METAC|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 4 WNKLTWL 10
WN++ WL
Sbjct: 347 WNRVVWL 353


>sp|CYSO_AERPE|PROTEIN CysO|Aeropyrum pernix (strain ATCC 700893

Query: 2 RTWNKLTW 9
R W KL W
Sbjct: 111 RVWLKLEW 118


>sp|ILVC_ARCFU|KETOL-ACID reductoisomerase (NAD(P)(+))|Archaeoglobus fulgidus (strain ATCC

Query: 4 WNKLTW 9
W+K TW
Sbjct: 50 WDKATW 55


>sp|PRIS_NATPD|DNA primase small subunit PriS|Natronomonas pharaonis (strain ATCC

Query: 2 RTWNKLTW 9
R W +TW
Sbjct: 31 REWGYITW 38


>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 1 SRTWNKLTWL 10
S WN + W+
Sbjct: 53 SYFWNPIAWM 62


>sp|SYK_METMJ|LYSINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 SRTWNKLT 8
SR W +LT
Sbjct: 310 SRPWRRLT 317


>sp|ASOR_PYRFU|ALIPHATIC sulfonate oxidoreductase, WOR-like subunit|Pyrococcus furiosus

Query: 1 SRTWNKLTW 9
+RTW K W
Sbjct: 289 NRTWIKKYW 297


>sp|RS12_METTP|SMALL ribosomal subunit protein uS12|Methanothrix thermoacetophila

Query: 4 WNKLTW 9
W KL W
Sbjct: 15 WKKLRW 20




48|Sequence|236|245|KLTWLTPLIP

>sp|Y2310_ARCFU|MEMO1 family protein AF_2310|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 TWLTPL 8
TWLTPL
Sbjct: 84 TWLTPL 89


>sp|TGT_ARCFU|PUTATIVE queuine tRNA-ribosyltransferase|Archaeoglobus fulgidus (strain ATCC

Query: 2 LTWLTPLIP 10
L W+ PL+P
Sbjct: 258 LDWVIPLLP 266


>sp|Y1477_THEKO|MEMO1 family protein TK1477|Thermococcus kodakarensis (strain ATCC

Query: 3 TWLTPL 8
TW+TPL
Sbjct: 92 TWITPL 97


>sp|SYT_THEVO|THREONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 TWLTPL 8
TWLTP+
Sbjct: 555 TWLTPI 560


>sp|SYT_THEAC|THREONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 TWLTPL 8
TWLTP+
Sbjct: 555 TWLTPI 560


>sp|SYT_METVS|THREONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 TWLTPL 8
TWLTP+
Sbjct: 499 TWLTPI 504


>sp|SYT_METM5|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 TWLTPL 8
TWLTP+
Sbjct: 499 TWLTPI 504


>sp|SYT_METMP|THREONINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 TWLTPL 8
TWLTP+
Sbjct: 499 TWLTPI 504


>sp|SYT_METM7|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 TWLTPL 8
TWLTP+
Sbjct: 499 TWLTPI 504


>sp|Y132_THEON|MEMO1 family protein TON_0132|Thermococcus onnurineus (strain NA1)

Query: 3 TWLTPL 8
+WLTPL
Sbjct: 92 SWLTPL 97


>sp|SYT_METM6|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 3 TWLTPL 8
TWLTP+
Sbjct: 499 TWLTPV 504


>sp|Y034_PYRHO|UPF0284 protein PH0034|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 TWLTPLIP 10
T+L PLIP
Sbjct: 87 TYLAPLIP 94


>sp|Y1726_THEGJ|MEMO1 family protein TGAM_1726|Thermococcus gammatolerans (strain DSM

Query: 4 WLTPL 8
WLTPL
Sbjct: 93 WLTPL 97


>sp|Y1182_METJA|UNCHARACTERIZED protein MJ1182|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 TWLTPL 8
TW+TP+
Sbjct: 205 TWITPI 210


>sp|SPEE_AERPE|POLYAMINE aminopropyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 2 LTWLTP 7
L WLTP
Sbjct: 17 LEWLTP 22


>sp|SYTC_SULAC|THREONINE--TRNA ligase catalytic subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 3 TWLTPL 8
TWL+P+
Sbjct: 438 TWLSPI 443


>sp|Y688_THEON|UPF0284 protein TON_0688|Thermococcus onnurineus (strain NA1)

Query: 3 TWLTPLIP 10
T+L PL+P
Sbjct: 84 TYLAPLVP 91


>sp|SYT_METHJ|THREONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 TWLTP 7
TWLTP
Sbjct: 487 TWLTP 491


>sp|Y534_THEGJ|UPF0284 protein TGAM_0534|Thermococcus gammatolerans (strain DSM 15229

Query: 3 TWLTPLIP 10
T+L PL+P
Sbjct: 84 TYLAPLVP 91


>sp|Y038_PYRAB|UPF0284 protein PYRAB00380|Pyrococcus abyssi (strain GE5 /

Query: 3 TWLTPLIP 10
T+L PL+P
Sbjct: 84 TYLAPLVP 91


>sp|FLAK_METJA|PREFLAGELLIN peptidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 WLTPLIP 10
W+TP IP
Sbjct: 199 WVTPAIP 205


>sp|Y853_THEKO|UPF0284 protein TK0853|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 TWLTPLIP 10
T+L PL+P
Sbjct: 84 TYLAPLVP 91


>sp|SYT_METS3|THREONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 TWLTPL 8
TWL+P+
Sbjct: 490 TWLSPI 495


>sp|Y601_METAC|MEMO1 family protein MA_0601|Methanosarcina acetivorans (strain ATCC

Query: 3 TWLTPL 8
TW TPL
Sbjct: 88 TWKTPL 93


>sp|Y1761_METMA|MEMO1 family protein MM_1761|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 TWLTPL 8
TW TPL
Sbjct: 88 TWKTPL 93


>sp|Y1422_METBF|MEMO1 family protein Mbar_A1422|Methanosarcina barkeri (strain Fusaro /

Query: 3 TWLTPL 8
TW TPL
Sbjct: 86 TWKTPL 91


>sp|MALA_HALJT|ALPHA-AMYLASE MalA|Haloarcula japonica (strain ATCC 49778

Query: 4 WLTPLI 9
WLTP++
Sbjct: 286 WLTPVL 291


>sp|PDAD_PYRHO|PYRUVOYL-DEPENDENT arginine decarboxylase|Pyrococcus horikoshii (strain ATCC

Query: 2 LTWLTP 7
+TW+TP
Sbjct: 1 MTWITP 6


>sp|SYT_CALMQ|THREONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 TWLTPL 8
TW+TP+
Sbjct: 496 TWITPV 501


>sp|FPOH_METBF|F(420)H(2) dehydrogenase subunit H|Methanosarcina barkeri (strain Fusaro /

Query: 4 WLTPLIP 10
++TPLIP
Sbjct: 8 YITPLIP 14


>sp|MTRC_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanopyrus kandleri (strain AV19

Query: 1 KLTWLTPLIP 10
W+ PLIP
Sbjct: 44 AFAWVHPLIP 53




49|Sequence|241|250|TPLIPSTLLS

>sp|PYRH_THEPD|URIDYLATE kinase|Thermofilum pendens (strain DSM 2475

Query: 2 PLIPSTLL 9
PLIP TLL
Sbjct: 97 PLIPETLL 104


>sp|MCH_HALHT|MESACONYL-COA hydratase|Haloarcula hispanica (strain ATCC 33960

Query: 2 PLIPSTLLS 10
P +P TLLS
Sbjct: 194 PAMPDTLLS 202


>sp|DP2S_THEAC|DNA polymerase II small subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 TPLIPSTL 8
TP+IPS +
Sbjct: 407 TPMIPSAV 414




50|Sequence|246|255|STLLSLGGLP

>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LLSLGGLP 10
L SLGGLP
Sbjct: 392 LKSLGGLP 399


>sp|FEN_PICTO|FLAP endonuclease 1|Picrophilus torridus (strain ATCC 700027

Query: 2 TLLSLGGLP 10
TLL+L GLP
Sbjct: 137 TLLNLMGLP 145


>sp|DAPAL_PYRFU|UNCHARACTERIZED DapA-like lyase PF0657|Pyrococcus furiosus (strain ATCC 43587

Query: 2 TLLSLGG 8
TLL+LGG
Sbjct: 193 TLLTLGG 199


>sp|PFDA_METLZ|PREFOLDIN subunit alpha|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 TLLSLGG 8
TLL+LGG
Sbjct: 64 TLLNLGG 70




51|Sequence|251|260|LGGLPPLTGF

>sp|RL21_PYRFU|LARGE ribosomal subunit protein eL21|Pyrococcus furiosus (strain ATCC

Query: 3 GLPPLTGF 10
GLPPLT F
Sbjct: 24 GLPPLTRF 31


>sp|SYW_SULTO|TRYPTOPHAN--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 LPPLTG 9
LPPLTG
Sbjct: 245 LPPLTG 250


>sp|SYW_SULAC|TRYPTOPHAN--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 LPPLTG 9
LPPLTG
Sbjct: 245 LPPLTG 250


>sp|SYW_SACS2|TRYPTOPHAN--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 LPPLTG 9
LPPLTG
Sbjct: 244 LPPLTG 249


>sp|COXX2_CENSY|PROTOHEME IX farnesyltransferase 2|Cenarchaeum symbiosum (strain A)

Query: 2 GGLPPLTGF 10
GG+PP+ G+
Sbjct: 160 GGMPPMIGW 168


>sp|RL21_THEGJ|LARGE ribosomal subunit protein eL21|Thermococcus gammatolerans (strain

Query: 3 GLPPLTGF 10
GLPPLT F
Sbjct: 24 GLPPLTRF 31


>sp|GUAAB_HALSA|GMP synthase [glutamine-hydrolyzing] subunit B|Halobacterium salinarum

Query: 1 LGGLPPLTGF 10
+GGLP GF
Sbjct: 145 VGGLPERVGF 154


>sp|GUAAB_HALS3|GMP synthase [glutamine-hydrolyzing] subunit B|Halobacterium salinarum

Query: 1 LGGLPPLTGF 10
+GGLP GF
Sbjct: 145 VGGLPERVGF 154


>sp|RL21_THEKO|LARGE ribosomal subunit protein eL21|Thermococcus kodakarensis (strain

Query: 3 GLPPLTGF 10
GLPPLT F
Sbjct: 24 GLPPLTRF 31


>sp|SYD_PYRAE|ASPARTATE--TRNA(ASP) ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 GLPPLTGF 10
G+PP GF
Sbjct: 389 GMPPHAGF 396


>sp|SYDND_SULTO|ASPARTATE--TRNA(ASP/ASN) ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GLPPLTGF 10
G+PP GF
Sbjct: 390 GMPPHAGF 397


>sp|RL21_PYRAB|LARGE ribosomal subunit protein eL21|Pyrococcus abyssi (strain GE5 /

Query: 3 GLPPLTGF 10
GLPPLT F
Sbjct: 24 GLPPLTRF 31


>sp|Y1309_METJA|UNCHARACTERIZED protein MJ1309|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LGGLPPLTGF 10
+ G+PP GF
Sbjct: 371 ISGIPPFNGF 380


>sp|SYDND_SACS2|ASPARTATE--TRNA(ASP/ASN) ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 GLPPLTGF 10
G+PP GF
Sbjct: 390 GMPPHAGF 397


>sp|FPON_METMA|F(420)H(2) dehydrogenase subunit N|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LGGLPPLTGF 10
L G+PP GF
Sbjct: 391 LAGIPPTAGF 400


>sp|SYDND_HALVO|ASPARTATE--TRNA(ASP/ASN) ligase|Haloferax volcanii (Halobacterium volcanii)

Query: 3 GLPPLTGF 10
G+PP GF
Sbjct: 394 GMPPHAGF 401


>sp|LONB_METJA|ARCHAEAL Lon protease|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LGGLPPL 7
LGG PPL
Sbjct: 212 LGGRPPL 218


>sp|FLA1_PYRHO|PROBABLE flagellin PH0546|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LGGLPPLT 8
LGG+PP T
Sbjct: 198 LGGIPPRT 205


>sp|RL21_PYRHO|LARGE ribosomal subunit protein eL21|Pyrococcus horikoshii (strain ATCC

Query: 3 GLPPLTGF 10
GLPPLT F
Sbjct: 24 GLPPLTRF 31


>sp|SUI1_SULTO|PROTEIN translation factor SUI1 homolog|Sulfurisphaera tokodaii (strain

Query: 2 GGLPP 6
GGLPP
Sbjct: 7 GGLPP 11


>sp|SUI1_SULAC|PROTEIN translation factor SUI1 homolog|Sulfolobus acidocaldarius (strain

Query: 2 GGLPP 6
GGLPP
Sbjct: 6 GGLPP 10


>sp|SUI1_METS5|PROTEIN translation factor SUI1 homolog|Metallosphaera sedula (strain

Query: 2 GGLPP 6
GGLPP
Sbjct: 7 GGLPP 11


>sp|SUI1_HYPBU|PROTEIN translation factor SUI1 homolog|Hyperthermus butylicus (strain

Query: 2 GGLPP 6
GGLPP
Sbjct: 10 GGLPP 14


>sp|SUI1_AERPE|PROTEIN translation factor SUI1 homolog|Aeropyrum pernix (strain ATCC

Query: 2 GGLPP 6
GGLPP
Sbjct: 8 GGLPP 12


>sp|GUAA_PYRAE|GMP synthase [glutamine-hydrolyzing]|Pyrobaculum aerophilum (strain

Query: 1 LGGLPP 6
+GGLPP
Sbjct: 341 VGGLPP 346


>sp|SYA_STAMF|ALANINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 3 GLPPLT 8
G+PPLT
Sbjct: 54 GVPPLT 59


>sp|CSA2A_SACS2|CRISPR-ASSOCIATED protein Cas7/Csa2 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 LPPLTG 9
LPP+TG
Sbjct: 265 LPPVTG 270


>sp|RL21_METB6|LARGE ribosomal subunit protein eL21|Methanoregula boonei (strain DSM

Query: 3 GLPPLT 8
GLPP+T
Sbjct: 23 GLPPVT 28


>sp|ARNS_SULAC|SERINE/THREONINE-PROTEIN kinase ArnS|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GLPPLTGF 10
GLPP T F
Sbjct: 218 GLPPDTSF 225


>sp|RL24E_METS5|LARGE ribosomal subunit protein eL24|Metallosphaera sedula (strain ATCC

Query: 2 GGLPPLTG 9
G +PP TG
Sbjct: 12 GDIPPATG 19


>sp|FPOM_METMA|F(420)H(2) dehydrogenase subunit M|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GLPPLTGF 10
GLP LTGF
Sbjct: 389 GLPGLTGF 396


>sp|SUI1_IGNH4|PROTEIN translation factor SUI1 homolog|Ignicoccus hospitalis (strain

Query: 2 GGLPP 6
GGLPP
Sbjct: 10 GGLPP 14


>sp|COFG_METMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LGGLPPLT 8
LGG+ PLT
Sbjct: 256 LGGISPLT 263


>sp|COFG_METAC|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LGGLPPLT 8
LGG+ PLT
Sbjct: 250 LGGISPLT 257


>sp|COFG_METBF|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LGGLPPLT 8
LGG+ PLT
Sbjct: 256 LGGISPLT 263


>sp|CAS10_THEON|CRISPR system single-strand-specific deoxyribonuclease

Query: 2 GGLPPLTGF 10
G LP L GF
Sbjct: 424 GNLPKLLGF 432


>sp|SECY_AERPE|PROTEIN translocase subunit SecY|Aeropyrum pernix (strain ATCC 700893

Query: 2 GGLPPLTGF 10
G P LTGF
Sbjct: 226 NGFPDLTGF 234


>sp|COFG_METMJ|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 LGGLPPLT 8
LGG+ PLT
Sbjct: 259 LGGVSPLT 266




52|Sequence|256|265|PLTGFLPKWA

>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 1 PLTGFLPKW 9
P+T F P W
Sbjct: 740 PMTHFKPSW 748


>sp|PUR1_PYRHO|AMIDOPHOSPHORIBOSYLTRANSFERASE horikoshii (strain ATCC 700860

Query: 2 LTGFLPKWA 10
LTG P+WA
Sbjct: 436 LTGNYPEWA 444


>sp|ENGB_METMP|PROBABLE GTP-binding protein EngB|Methanococcus maripaludis (strain DSM

Query: 4 GFLPKW 9
GFLP W
Sbjct: 188 GFLPPW 193


>sp|PUR1_PYRAB|AMIDOPHOSPHORIBOSYLTRANSFERASE abyssi (strain GE5 /

Query: 2 LTGFLPKWA 10
LTG P+WA
Sbjct: 436 LTGEYPEWA 444


>sp|G3P_PYRIL|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 GFLPKW 9
G LPKW
Sbjct: 319 GILPKW 324


>sp|NADE_THESM|NH(3)-DEPENDENT NAD(+) synthetase|Thermococcus sibiricus (strain DSM 12597

Query: 2 LTGFLPKWA 10
LTG+ KW
Sbjct: 140 LTGYFTKWG 148


>sp|NADE_PYRHO|NH(3)-DEPENDENT NAD(+) synthetase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LTGFLPKWA 10
LTG+ KW
Sbjct: 136 LTGYFTKWG 144


>sp|NADE_PYRFU|NH(3)-DEPENDENT NAD(+) synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LTGFLPKWA 10
LTG+ KW
Sbjct: 136 LTGYFTKWG 144


>sp|NADE_PYRAB|NH(3)-DEPENDENT NAD(+) synthetase|Pyrococcus abyssi (strain GE5 /

Query: 2 LTGFLPKWA 10
LTG+ KW
Sbjct: 136 LTGYFTKWG 144


>sp|NADE_THEKO|NH(3)-DEPENDENT NAD(+) synthetase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LTGFLPKWA 10
LTG+ KW
Sbjct: 140 LTGYFTKWG 148


>sp|AGLE_HALVD|GLYCOSYLTRANSFERASE AglE|Haloferax volcanii (strain ATCC 29605

Query: 2 LTGFLPK 8
L GFLPK
Sbjct: 249 LVGFLPK 255


>sp|HIS8_METAR|HISTIDINOL-PHOSPHATE aminotransferase|Methanocella arvoryzae (strain DSM 22066

Query: 4 GFLPKW 9
GF+P W
Sbjct: 233 GFMPDW 238


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 1 PLTGFLPK 8
PLT F+P+
Sbjct: 742 PLTHFIPR 749


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 1 PLTGFLPK 8
PLT F+P+
Sbjct: 758 PLTHFIPR 765


>sp|Y1428_PYRHO|UPF0091 protein PH1428|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LTGFLPKWA 10
L+G+LPK A
Sbjct: 99 LSGYLPKRA 107


>sp|HEMH_THEAC|FERROCHELATASE acidophilum (strain ATCC 25905

Query: 5 FLPKWA 10
FLP WA
Sbjct: 144 FLPMWA 149


>sp|Y2041_ARCFU|UNCHARACTERIZED protein AF_2041|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 TGFLPKW 9
+G++PKW
Sbjct: 100 SGYMPKW 106


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PLTGFLPK 8
PLTG PK
Sbjct: 1077 PLTGACPK 1084


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 PLTGFLPK 8
PLTG PK
Sbjct: 1071 PLTGACPK 1078


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 PLTGFLPK 8
PLTG PK
Sbjct: 1070 PLTGACPK 1077


>sp|Y1309_METJA|UNCHARACTERIZED protein MJ1309|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PLTGFLPKW 9
P GF KW
Sbjct: 376 PFNGFQSKW 384


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 1 PLTGFLPK 8
PLTG PK
Sbjct: 1075 PLTGSCPK 1082


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 PLTGFLPK 8
PLT F PK
Sbjct: 848 PLTHFRPK 855


>sp|NIFE_METBA|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanosarcina

Query: 5 FLPKW 9
+LPKW
Sbjct: 264 YLPKW 268


>sp|RIFK_METM5|RIBOFLAVIN kinase|Methanococcus maripaludis (strain C5 /

Query: 2 LTGFLP 7
LTGF+P
Sbjct: 30 LTGFIP 35


>sp|HELS_ARCFU|ATP-DEPENDENT DNA helicase Hel308|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PLTGFL 6
PLTGF+
Sbjct: 490 PLTGFI 495


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 PLTGFLPK 8
PLTG PK
Sbjct: 1616 PLTGKCPK 1623


>sp|AMZA_THEKO|ARCHAEMETZINCIN kodakarensis (strain ATCC BAA-918

Query: 4 GFLPKW 9
G++P+W
Sbjct: 10 GYIPEW 15


>sp|SYW_AERPE|TRYPTOPHAN--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 LTGFLP 7
LTGF+P
Sbjct: 74 LTGFMP 79


>sp|XYLS_SACS2|ALPHA-XYLOSIDASE solfataricus (strain ATCC 35092

Query: 5 FLPKWA 10
LPKWA
Sbjct: 216 LLPKWA 221


>sp|IDI2_PYRHO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LTGFLPKW 9
+TGF+ +W
Sbjct: 347 ITGFVREW 354


>sp|SYFA_THEGJ|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 1 PLTGFLPK 8
P +GFLP+
Sbjct: 295 PKSGFLPE 302


>sp|IDI2_PYRAB|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrococcus abyssi (strain GE5 /

Query: 2 LTGFLPKW 9
+TGF+ +W
Sbjct: 346 ITGFVREW 353


>sp|AOR_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus furiosus (strain

Query: 1 PLTGFL 6
PLTGF+
Sbjct: 84 PLTGFI 89


>sp|RS15_HYPBU|SMALL ribosomal subunit protein uS15|Hyperthermus butylicus (strain DSM

Query: 1 PLTGFLPKW 9
P T +PKW
Sbjct: 16 PATPTVPKW 24




53|Sequence|261|270|LPKWAIIEEF

>sp|RNZ_PYRAE|RIBONUCLEASE Z|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LPKWAIIE 8
LPKWA+ E
Sbjct: 149 LPKWALTE 156


>sp|TIAS_ACIS3|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Acidilobus saccharovorans

Query: 4 WAIIEEF 10
W+IIEE+
Sbjct: 79 WSIIEEY 85


>sp|RNZ_PYRAR|RIBONUCLEASE Z|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LPKWAIIE 8
LPKWA+ +
Sbjct: 149 LPKWALTK 156


>sp|RS13_METBU|SMALL ribosomal subunit protein uS13|Methanococcoides burtonii (strain

Query: 1 LPKWAIIEEF 10
LPKW + +F
Sbjct: 75 LPKWMLNRQF 84


>sp|RNZ_PYRCJ|RIBONUCLEASE Z|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LPKWAI 6
LPKWA+
Sbjct: 149 LPKWAL 154


>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain

Query: 3 KWAIIEEF 10
+WAI E F
Sbjct: 7 RWAIAESF 14


>sp|RNZ_PYRIL|RIBONUCLEASE Z|Pyrobaculum islandicum (strain DSM 4184

Query: 1 LPKWAI 6
LPKWA+
Sbjct: 149 LPKWAL 154


>sp|TIAS_METLZ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanocorpusculum labreanum

Query: 2 PKWAI 6
PKWAI
Sbjct: 224 PKWAI 228


>sp|KADA_META3|ADENYLATE kinase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LPKWAIIE 8
LPKW + E
Sbjct: 105 LPKWVLDE 112


>sp|RNZ_PYRNV|RIBONUCLEASE Z|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 LPKWAI 6
LP+WA+
Sbjct: 149 LPRWAL 154


>sp|ACSA_METTP|ACETYL-COENZYME A synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 WAIIEEF 10
W+IIEE+
Sbjct: 356 WSIIEEY 362


>sp|CAS3_METTH|CRISPR-ASSOCIATED nuclease/helicase Cas3|Methanothermobacter thermautotrophicus

Query: 4 WAIIEEF 10
W ++EEF
Sbjct: 87 WEVLEEF 93




54|Sequence|266|275|IIEEFTKNNS

>sp|PYRDB_METAC|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanosarcina acetivorans

Query: 4 EFTKNNS 10
EF KNNS
Sbjct: 93 EFAKNNS 99


>sp|XDH1_HALVD|D-XYLOSE 1-dehydrogenase [NADP(+)] 1|Haloferax volcanii (strain ATCC 29605

Query: 1 IIEEFTKNN 9
I+EEFT+ +
Sbjct: 8 IVEEFTRRD 16


>sp|THI4_METBU|THIAMINE thiazole synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 IIEEFTK 7
IIEEF+K
Sbjct: 12 IIEEFSK 18


>sp|AGLB_METVO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanococcus voltae

Query: 2 IEEFTKNN 9
IE+F KNN
Sbjct: 458 IEQFIKNN 465


>sp|G1PDH_STAMF|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Staphylothermus marinus (strain ATCC

Query: 1 IIEEFTKNN 9
I+EE KNN
Sbjct: 55 IVEEAMKNN 63


>sp|IF2P_CALMQ|PROBABLE translation initiation factor IF-2|Caldivirga maquilingensis

Query: 1 IIEEFTK 7
++EEFTK
Sbjct: 441 LVEEFTK 447


>sp|MCRG_METVA|METHYL-COENZYME M reductase subunit gamma|Methanococcus vannielii

Query: 2 IEEFTKN 8
+EEF+KN
Sbjct: 133 LEEFSKN 139


>sp|Y149_METJA|UNCHARACTERIZED protein MJ0149|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IIEEFTKNN 9
II E+T NN
Sbjct: 22 IIAEYTDNN 30


>sp|Y434_METJA|GAMMA-GLUTAMYLCYCLOTRANSFERASE and putative RNase MJ0434|Methanocaldococcus jannaschii (strain

Query: 1 IIEEFTKNNS 10
+IEE+TK+ +
Sbjct: 18 LIEEYTKDKT 27


>sp|HIS8_SULTO|HISTIDINOL-PHOSPHATE aminotransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IIEEFTKN 8
I+EE TKN
Sbjct: 273 IVEEITKN 280


>sp|GSA_METBU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcoides burtonii (strain DSM 6242

Query: 1 IIEEFTKN 8
I E+FTKN
Sbjct: 168 IPEDFTKN 175


>sp|TYSY_METJA|PUTATIVE thymidylate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 IEEFTKN 8
+EE+TKN
Sbjct: 64 VEEYTKN 70


>sp|PCP_PYRAB|PYRROLIDONE-CARBOXYLATE peptidase|Pyrococcus abyssi (strain GE5 /

Query: 1 IIEEFTKNN 9
I+EE +NN
Sbjct: 120 IVEEMKRNN 128


>sp|Y2143_SULTO|UPF0284 protein STK_21430|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IIEEFTKN 8
II+EF KN
Sbjct: 244 IIKEFNKN 251


>sp|SYS_THEAC|SERINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 IEEFTKNNS 10
IEEF KN+
Sbjct: 137 IEEFKKNSG 145




55|Sequence|271|280|TKNNSLIIPT

>sp|PURP_CALMQ|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Caldivirga maquilingensis (strain

Query: 2 KNNSLIIP 9
KNN+++IP
Sbjct: 77 KNNAILIP 84


>sp|TRKA2_METMA|TRK system potassium uptake protein|Methanosarcina mazei (strain ATCC

Query: 2 KNNSLIIP 9
+NN +IIP
Sbjct: 188 RNNDIIIP 195


>sp|ACDG1_METTE|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina

Query: 1 TKNNSLIIP 9
T +N+LIIP
Sbjct: 421 TNHNTLIIP 429


>sp|CBID_META3|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanococcus aeolicus (strain ATCC

Query: 1 TKNNSLIIP 9
+KN+ LIIP
Sbjct: 44 SKNDKLIIP 52


>sp|Y1524_METJA|UPF0166 protein MJ1524|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KNNSLIIPT 10
KNN LII T
Sbjct: 89 KNNGLIIIT 97


>sp|RS2_METTP|SMALL ribosomal subunit protein uS2|Methanothrix thermoacetophila (strain

Query: 1 TKNNSLIIPT 10
T N L+IPT
Sbjct: 157 TSNVDLVIPT 166


>sp|RS2_METAR|SMALL ribosomal subunit protein uS2|Methanocella arvoryzae (strain DSM

Query: 1 TKNNSLIIPT 10
T N L+IPT
Sbjct: 159 TSNIDLVIPT 168


>sp|CBID_SACI1|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain Y.N.15.51

Query: 2 KNNSLIIPT 10
K N+++IPT
Sbjct: 33 KRNTVVIPT 41


>sp|CBID_SACI7|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain Y.G.57.14

Query: 2 KNNSLIIPT 10
K N+++IPT
Sbjct: 33 KRNTVVIPT 41


>sp|CBID_SACI6|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 KNNSLIIPT 10
K N+++IPT
Sbjct: 33 KRNTVVIPT 41


>sp|CBID_SACI4|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 KNNSLIIPT 10
K N+++IPT
Sbjct: 33 KRNTVVIPT 41


>sp|CBID_SACI3|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 2 KNNSLIIPT 10
K N+++IPT
Sbjct: 33 KRNTVVIPT 41


>sp|CBID_SACI2|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 2 KNNSLIIPT 10
K N+++IPT
Sbjct: 33 KRNTVVIPT 41


>sp|CH60_METVS|CHAPERONIN GroEL|Methanococcus vannielii (strain ATCC 35089

Query: 1 TKNNSLII 8
TK+N+LII
Sbjct: 324 TKDNTLII 331


>sp|RS2_HALMA|SMALL ribosomal subunit protein uS2|Haloarcula marismortui (strain ATCC

Query: 1 TKNNSLIIPT 10
T N L++PT
Sbjct: 220 TSNVDLVVPT 229


>sp|CBID_METVS|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 2 KNNSLIIP 9
KN +LIIP
Sbjct: 45 KNETLIIP 52


>sp|RS2_HALWD|SMALL ribosomal subunit protein uS2|Haloquadratum walsbyi (strain DSM

Query: 1 TKNNSLIIPT 10
T N L++PT
Sbjct: 232 TSNTDLVVPT 241




56|Sequence|276|285|LIIPTIMATI

>sp|CDPAS_THEAC|CDP-ARCHAEOL synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LIIPTIMAT 9
+IIP IMAT
Sbjct: 83 IIIPFIMAT 91




57|Sequence|281|290|IMATITLLNL

>sp|ALBA_IGNH4|DNA/RNA-BINDING protein Alba|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 IMATITLLN 9
++AT+TLLN
Sbjct: 22 VLATLTLLN 30




58|Sequence|286|295|TLLNLYFYLR

>sp|PYLS_METTE|PYRROLYSINE--TRNA ligase|Methanosarcina thermophila

Query: 4 NLYFYLR 10
NLY YLR
Sbjct: 328 NLYNYLR 334


>sp|PYLS_METMA|PYRROLYSINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 NLYFYLR 10
NLY YLR
Sbjct: 304 NLYNYLR 310


>sp|PYLS_METAC|PYRROLYSINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 NLYFYLR 10
NLY YLR
Sbjct: 293 NLYNYLR 299


>sp|TRPC_SULTO|INDOLE-3-GLYCEROL phosphate synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LLNLYFYLR 10
L+NLY Y R
Sbjct: 141 LINLYEYAR 149


>sp|Y2330_ARCFU|UNCHARACTERIZED protein AF_2330|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LLNLYFYL 9
L NL+FYL
Sbjct: 116 LTNLHFYL 123




59|Sequence|291|300|YFYLRLIYST

>sp|HMDH_METTH|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 YFYLRLIYST 10
Y Y R +Y+T
Sbjct: 178 YVYPRFVYTT 187


>sp|RPO1N_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermoplasma acidophilum (strain ATCC

Query: 1 YFYLRLIYST 10
Y+Y R I+ST
Sbjct: 552 YYYGRDIFST 561


>sp|RL6_SULTO|LARGE ribosomal subunit protein uL6|Sulfurisphaera tokodaii (strain DSM

Query: 2 FYLRLIYS 9
+YL++IY+
Sbjct: 88 YYLKIIYT 95


>sp|RL6_SACS2|LARGE ribosomal subunit protein uL6|Saccharolobus solfataricus (strain

Query: 2 FYLRLIYS 9
+YL++IY+
Sbjct: 88 YYLKIIYT 95


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 1 YFYLRLIYS 9
Y YLRL+++
Sbjct: 112 YDYLRLLFA 120




60|Sequence|296|305|LIYSTSITLL

>sp|KDGK_SACS2|2-DEHYDRO-3-DEOXYGLUCONOKINASE/2-DEHYDRO-3-DEOXYGALACTONOKINASE solfataricus (strain ATCC 35092

Query: 1 LIYSTSITL 9
L++ST ITL
Sbjct: 131 LVHSTGITL 139




61|Sequence|301|310|SITLLPMSNN

>sp|AROD_SACS2|3-DEHYDROQUINATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SITLLPMSNN 10
++T++PMSNN
Sbjct: 161 NVTVIPMSNN 170


>sp|COFD_HALSA|2-PHOSPHO-L-LACTATE transferase|Halobacterium salinarum (strain ATCC 700922

Query: 1 SITLLPMSNN 10
S+ L+PMSN+
Sbjct: 156 SVDLVPMSND 165


>sp|COFD_HALS3|2-PHOSPHO-L-LACTATE transferase|Halobacterium salinarum (strain ATCC 29341

Query: 1 SITLLPMSNN 10
S+ L+PMSN+
Sbjct: 156 SVDLVPMSND 165


>sp|COFD_HALMA|2-PHOSPHO-L-LACTATE transferase|Haloarcula marismortui (strain ATCC 43049

Query: 3 TLLPMSNN 10
TLLPMS++
Sbjct: 157 TLLPMSDD 164


>sp|MPTA_THEVO|GTP cyclohydrolase MptA|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SITLLPMSNN 10
++TLLP+S++
Sbjct: 240 AVTLLPLSDD 249


>sp|COFD_METHJ|2-PHOSPHO-L-LACTATE transferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 SITLLPMSNN 10
S T+LPMS++
Sbjct: 124 STTILPMSDS 133


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 2 ITLLPMSNN 10
+T++P+ NN
Sbjct: 98 LTMIPVENN 106


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 2 ITLLPMSNN 10
+T++P+ NN
Sbjct: 98 LTMIPVENN 106




62|Sequence|306|315|PMSNNVKMKW

>sp|SIHH_METMA|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 SNNVKMKW 10
S N+KM+W
Sbjct: 9 SGNMKMEW 16


>sp|SIHH_METAC|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 SNNVKMKW 10
S N+KM+W
Sbjct: 9 SGNMKMEW 16


>sp|ARFB_METST|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanosphaera stadtmanae (strain

Query: 3 SNNVKMKW 10
SNN+K+K+
Sbjct: 3 SNNIKLKY 10


>sp|SYK_PYRHO|LYSINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 SNNVKMKW 10
S NVK++W
Sbjct: 211 SGNVKLRW 218


>sp|SYK_PYRAB|LYSINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 SNNVKMKW 10
S NVK++W
Sbjct: 211 SGNVKLRW 218


>sp|Y1401_METJA|PROBABLE ATP-dependent helicase MJ1401|Methanocaldococcus jannaschii (strain

Query: 2 MSNNVKMK 9
+SNN+K+K
Sbjct: 675 LSNNLKIK 682


>sp|FEN_STAMF|FLAP endonuclease 1|Staphylothermus marinus (strain ATCC 43588

Query: 1 PMSNNVKMKW 10
P+S + K++W
Sbjct: 291 PVSTDYKLEW 300


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 NNVKMKW 10
NN K KW
Sbjct: 227 NNFKAKW 233




63|Sequence|311|320|VKMKWQFEHT

>sp|SAHH_HALSA|ADENOSYLHOMOCYSTEINASE salinarum (strain ATCC 700922

Query: 2 KMKWQFEH 9
K+ W FEH
Sbjct: 24 KIDWAFEH 31


>sp|SAHH_HALS3|ADENOSYLHOMOCYSTEINASE salinarum (strain ATCC 29341

Query: 2 KMKWQFEH 9
K+ W FEH
Sbjct: 24 KIDWAFEH 31


>sp|AATA_HALVD|A-TYPE ATP synthase subunit A|Haloferax volcanii (strain ATCC 29605

Query: 4 KWQFEHT 10
KW+FE T
Sbjct: 125 KWEFEPT 131


>sp|Y045_METTH|MEMO1 family protein MTH_45|Methanothermobacter thermautotrophicus

Query: 2 KMKWQFEH 9
+++W FEH
Sbjct: 22 RIEWCFEH 29


>sp|AATA_METMP|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain DSM 14266

Query: 2 KMKWQFEHT 10
++KW FE T
Sbjct: 115 EIKWDFEPT 123


>sp|COBS_THEVO|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 MKWQFEH 9
+ WQF H
Sbjct: 47 ITWQFSH 53


>sp|AATA_METM5|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C5 /

Query: 3 MKWQFEHT 10
+KW FE T
Sbjct: 116 IKWDFEAT 123


>sp|AOX2_AERPE|HEME-COPPER oxidase subunit 2|Aeropyrum pernix (strain ATCC 700893

Query: 5 WQFEHT 10
WQFE++
Sbjct: 115 WQFEYS 120


>sp|AAT_SULAC|ASPARTATE aminotransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VKMKWQ 6
VKMKW+
Sbjct: 145 VKMKWR 150


>sp|Y1590_CALMQ|MEMO1 family protein Cmaq_1590|Caldivirga maquilingensis (strain ATCC

Query: 2 KMKWQFEH 9
++KW EH
Sbjct: 23 QIKWSIEH 30


>sp|AATA_METM7|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C7 /

Query: 3 MKWQFEHT 10
+KW FE T
Sbjct: 116 IKWDFEPT 123


>sp|HTPX1_SULAC|PROTEASE HtpX homolog 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 MKWQFEH 9
MKW EH
Sbjct: 273 MKWLHEH 279


>sp|SYH_PYRFU|HISTIDINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VKMKWQFE 8
VK +W FE
Sbjct: 17 VKRRWVFE 24


>sp|GATD_PYRHO|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Pyrococcus horikoshii (strain ATCC

Query: 1 VKMKWQFEHT 10
VK+ W HT
Sbjct: 400 VKLMWVLGHT 409


>sp|GATD_PYRFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VKMKWQFEHT 10
VK+ W HT
Sbjct: 400 VKLMWVLGHT 409


>sp|GATD_PYRAB|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Pyrococcus abyssi (strain GE5 /

Query: 1 VKMKWQFEHT 10
VK+ W HT
Sbjct: 400 VKLMWVLGHT 409


>sp|RPO6_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo6|Archaeoglobus fulgidus (strain ATCC

Query: 1 VKMKWQFEHT 10
+K+K+ FE+T
Sbjct: 3 IKVKFPFEYT 12




64|Sequence|316|325|QFEHTKPTPF

>sp|CYSO_AERPE|PROTEIN CysO|Aeropyrum pernix (strain ATCC 700893

Query: 2 FEHTKPTPF 10
FE KPTP
Sbjct: 91 FERGKPTPL 99


>sp|GSA_NATPD|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 EHTKPTPF 10
EHT P PF
Sbjct: 172 EHTIPVPF 179


>sp|AROC_METKA|CHORISMATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 4 HTKPTP 9
H KPTP
Sbjct: 303 HVKPTP 308


>sp|GSA_HALLT|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 EHTKPTPF 10
EHT P PF
Sbjct: 171 EHTLPIPF 178


>sp|CAPPA_SULTO|PHOSPHOENOLPYRUVATE carboxylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 QFEHTKPTP 9
+F +TKPTP
Sbjct: 117 KFFNTKPTP 125


>sp|Y579_METJA|UNCHARACTERIZED protein MJ0579|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 TKPTPF 10
T+PTPF
Sbjct: 189 TEPTPF 194


>sp|GSA_HALSA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halobacterium salinarum (strain ATCC 700922

Query: 3 EHTKPTPF 10
+HT P PF
Sbjct: 172 QHTIPVPF 179


>sp|GSA_HALS3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halobacterium salinarum (strain ATCC 29341

Query: 3 EHTKPTPF 10
+HT P PF
Sbjct: 172 QHTIPVPF 179


>sp|NADM_PICTO|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 QFEHTKPTPF 10
QF HT PF
Sbjct: 38 QFSHTLKDPF 47


>sp|GCH1L_PYRAB|GTP cyclohydrolase 1 type 2|Pyrococcus abyssi (strain GE5 /

Query: 1 QFEHTKPTP 9
+FE KP P
Sbjct: 136 EFEEPKPLP 144


>sp|SYT_METTP|THREONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 QFEHTKPTPF 10
+FE KPT F
Sbjct: 12 EFEAKKPTKF 21


>sp|SLAA_ACIAM|S-LAYER protein A|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 FEHTKPTPF 10
F T PTPF
Sbjct: 149 FNTTPPTPF 157


>sp|XYLS_SACS2|ALPHA-XYLOSIDASE solfataricus (strain ATCC 35092

Query: 3 EHTKP 7
EHTKP
Sbjct: 710 EHTKP 714


>sp|RL18E_SACS2|LARGE ribosomal subunit protein eL18|Saccharolobus solfataricus (strain

Query: 3 EHTKP 7
EHTKP
Sbjct: 50 EHTKP 54


>sp|GSA_HALWD|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 EHTKPTPF 10
+HT P PF
Sbjct: 171 KHTLPVPF 178


>sp|NADM_THEVO|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 QFEHTKPTPF 10
Q+ HT PF
Sbjct: 44 QYSHTTVNPF 53




65|Sequence|321|330|KPTPFLPTLI

>sp|YPV4_METTF|UNCHARACTERIZED protein ORF4|Methanothermobacter thermautotrophicus

Query: 2 PTPFLPT 8
P+PF PT
Sbjct: 140 PSPFAPT 146


>sp|YPZ4_METTF|UNCHARACTERIZED protein ORF4'|Methanothermobacter thermautotrophicus

Query: 2 PTPFLPT 8
P+PF PT
Sbjct: 140 PSPFAPT 146


>sp|RAD50_PYRHO|DNA double-strand break repair Rad50|Pyrococcus horikoshii (strain ATCC

Query: 1 KPTPFL 6
+PTPFL
Sbjct: 820 EPTPFL 825


>sp|RAD50_PYRAB|DNA double-strand break repair Rad50|Pyrococcus abyssi (strain GE5 /

Query: 1 KPTPFL 6
+PTPFL
Sbjct: 821 EPTPFL 826


>sp|RAD50_ARCFU|DNA double-strand break repair Rad50|Archaeoglobus fulgidus (strain

Query: 1 KPTPFL 6
+PTPFL
Sbjct: 825 EPTPFL 830


>sp|RIBL_METMJ|FAD synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 KPTPFLP 7
KP PFLP
Sbjct: 44 KPRPFLP 50


>sp|RL4_THEKO|LARGE ribosomal subunit protein uL4|Thermococcus kodakarensis (strain

Query: 3 TPFLPTLI 10
TPF P LI
Sbjct: 24 TPFRPDLI 31


>sp|RL4_THESM|LARGE ribosomal subunit protein uL4|Thermococcus sibiricus (strain DSM

Query: 3 TPFLPTLI 10
TPF P LI
Sbjct: 24 TPFRPDLI 31


>sp|DGGGP_THESM|DIGERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus sibiricus (strain DSM 12597

Query: 1 KPTPFLPTLI 10
KP PF+ L+
Sbjct: 125 KPQPFIGNLV 134


>sp|RL4_THEON|LARGE ribosomal subunit protein uL4|Thermococcus onnurineus (strain

Query: 3 TPFLPTLI 10
TPF P LI
Sbjct: 24 TPFRPDLI 31




66|Sequence|326|335|LPTLIALTTL

>sp|SYE_NANEQ|GLUTAMATE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 LPTLIAL 7
LPTLIAL
Sbjct: 342 LPTLIAL 348




67|Sequence|331|340|ALTTLLLPIS

>sp|MALG_THELN|TREHALOSE/MALTOSE transport system permease protein|Thermococcus litoralis (strain

Query: 2 LTTLLLPIS 10
LTT++LP+S
Sbjct: 183 LTTIILPLS 191




68|Sequence|336|347|LLPISPFMLMIL

>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LLPISPFM 8
L PI+PFM
Sbjct: 674 LAPITPFM 681


>sp|NADK_METMJ|NAD kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 LLPISPFML 9
L+P++P+ML
Sbjct: 192 LVPLAPYML 200


>sp|NADK_METLZ|NAD kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LLPISPFML 9
L+P++P+ML
Sbjct: 193 LVPLAPYML 201


>sp|NADK_ARCFU|NAD kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LLPISPF 7
L+PI+PF
Sbjct: 176 LIPIAPF 182


>sp|NADK_METPE|NAD kinase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 LLPISPFML 9
L+P++P+ML
Sbjct: 192 LVPLAPYML 200


>sp|NADK_METB6|NAD kinase|Methanoregula boonei (strain DSM 21154

Query: 1 LLPISPFML 9
L+P++P++L
Sbjct: 192 LVPLAPYLL 200


>sp|Y522_METJA|UNCHARACTERIZED protein MJ0522|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PISPFMLMI 11
P SP++LMI
Sbjct: 192 PGSPYILMI 200






THE END