1|SequenceR|10|1|LLTCPFVPFM
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 1 LLTCPFV 7
LTCPFV
Sbjct: 882 FLTCPFV 888
>sp|NCAP_SINV|NUCLEOPROTEIN Nombre orthohantavirus (SNV) (Sin
Query: 4 CPFVP 8
CPF+P
Sbjct: 244 CPFLP 248
>sp|NCAP_BCCV|NUCLEOPROTEIN Creek Canal orthohantavirus (BCCV)
Query: 4 CPFVP 8
CPF+P
Sbjct: 244 CPFLP 248
>sp|NCAP_ANDV|NUCLEOPROTEIN orthohantavirus (ANDV) (Andes virus)
Query: 4 CPFVP 8
CPF+P
Sbjct: 244 CPFLP 248
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 LLTCPFVPF 9
L+ PFVP
Sbjct: 292 LMVIPFVPL 300
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 LLTCPFVPF 9
L+ PFVP
Sbjct: 292 LMVIPFVPL 300
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 1 LLTCPF 6
LLTCP+
Sbjct: 490 LLTCPY 495
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 1 LLTCPFVPF 9
L+ PFVP
Sbjct: 291 LMVIPFVPL 299
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 LLTCPFVPF 9
L+ PFVP
Sbjct: 290 LMIIPFVPL 298
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 LLTCPFVPF 9
L+ PFVP
Sbjct: 290 LMIIPFVPL 298
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 LLTCPFVPF 9
L+ PFVP
Sbjct: 293 LMIIPFVPL 301
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 LLTCPFVPF 9
L+ PFVP
Sbjct: 292 LMIIPFVPL 300
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 LLTCPFVPF 9
L+ PFVP
Sbjct: 290 LMIIPFVPL 298
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 2 LTCPFVPF 9
+TC +PF
Sbjct: 1132 VTCNLIPF 1139
>sp|U10_HHV6U|U10 protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LLTCPFVPF 9
+L PFVP+
Sbjct: 161 ILMVPFVPY 169
>sp|EAD_EBVG|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 3 TCPFVPFM 10
TC +P+M
Sbjct: 142 TCALMPYM 149
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 LTCPFVP 8
+ CP++P
Sbjct: 2712 ILCPYMP 2718
>sp|EAD_EBVB9|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 3 TCPFVPFM 10
TC +P+M
Sbjct: 142 TCALMPYM 149
>sp|EAD_EBVA8|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 3 TCPFVPFM 10
TC +P+M
Sbjct: 142 TCALMPYM 149
>sp|U10_HHV6Z|PROTEIN U10|Human herpesvirus 6B (strain Z29)
Query: 1 LLTCPFVPF 9
+L PFVP+
Sbjct: 161 VLMVPFVPY 169
>sp|U10_HHV6H|PROTEIN U10|Human herpesvirus 6B (HHV-6 variant
Query: 1 LLTCPFVPF 9
+L PFVP+
Sbjct: 161 VLMVPFVPY 169
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 4 CPFVP 8
CP++P
Sbjct: 2713 CPYMP 2717
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 4 CPFVP 8
CP++P
Sbjct: 2710 CPYMP 2714
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 4 CPFVP 8
CP++P
Sbjct: 2714 CPYMP 2718
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 4 CPFVP 8
CP++P
Sbjct: 2705 CPYMP 2709
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 4 CPFVP 8
CP++P
Sbjct: 2713 CPYMP 2717
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 4 CPFVP 8
CP++P
Sbjct: 2693 CPYMP 2697
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 4 CPFVP 8
CP++P
Sbjct: 2712 CPYMP 2716
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 4 CPFVP 8
CP++P
Sbjct: 2712 CPYMP 2716
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 4 CPFVP 8
CP++P
Sbjct: 2712 CPYMP 2716
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 CPFVP 8
CP++P
Sbjct: 2712 CPYMP 2716
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 LLTCPFVP 8
+L C FVP
Sbjct: 679 ILPCSFVP 686
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 2 LTCPFVPF 9
L+C F+P
Sbjct: 1177 LSCKFLPL 1184
>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)
Query: 5 PFVPF 9
PF+PF
Sbjct: 79 PFLPF 83
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 2 LTCPFVPF 9
L+C F+P
Sbjct: 1177 LSCKFLPL 1184
>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 PFVPF 9
PF+PF
Sbjct: 79 PFLPF 83
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 2 LTCPFVPF 9
L+C F+P
Sbjct: 1173 LSCKFLPL 1180
>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P
Query: 5 PFVPF 9
PF+PF
Sbjct: 62 PFLPF 66
>sp|CAPSP_ADE12|PENTON protein|Human adenovirus A serotype 12
Query: 3 TCPFV 7
TCP+V
Sbjct: 476 TCPYV 480
>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)
Query: 5 PFVPF 9
PF+PF
Sbjct: 79 PFLPF 83
>sp|POLS_RRV2|STRUCTURAL polyprotein|Ross river virus (strain 213970)
Query: 2 LTCPFVP 8
T PFVP
Sbjct: 237 FTSPFVP 243
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LTCPFVPFM 10
L CPFV M
Sbjct: 713 LFCPFVHTM 721
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 LLTCPFVP 8
LLTC F P
Sbjct: 879 LLTCVFHP 886
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 2 LTCPFVPFM 10
L CPFV M
Sbjct: 713 LFCPFVHTM 721
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 PFVPF 9
PF+PF
Sbjct: 61 PFLPF 65
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 2 LTCPFVP 8
T PFVP
Sbjct: 571 FTSPFVP 577
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 2 LTCPFVP 8
T PFVP
Sbjct: 571 FTSPFVP 577
>sp|GLRX1_VACCT|GLUTAREDOXIN-1 virus (strain Tian Tan)
Query: 3 TCPF 6
TCPF
Sbjct: 22 TCPF 25
>sp|GLRX1_VACCP|GLUTAREDOXIN-1 virus (strain L-IVP) (VACV)
Query: 3 TCPF 6
TCPF
Sbjct: 22 TCPF 25
>sp|GLRX1_VACCC|GLUTAREDOXIN-1 virus (strain Copenhagen) (VACV)
Query: 3 TCPF 6
TCPF
Sbjct: 22 TCPF 25
>sp|GLRX1_VACCA|GLUTAREDOXIN-1 virus (strain Ankara) (VACV)
Query: 3 TCPF 6
TCPF
Sbjct: 22 TCPF 25
>sp|GLRX1_CWPXB|GLUTAREDOXIN-1 virus (strain Brighton Red)
Query: 2 LTCPF 6
TCPF
Sbjct: 21 FTCPF 25
>sp|EBNA6_EBVG|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 CPFVPF 9
CP +PF
Sbjct: 932 CPSMPF 937
>sp|GLRX1_CWPXG|GLUTAREDOXIN-1 virus (strain GRI-90 /
Query: 2 LTCPF 6
TCPF
Sbjct: 21 FTCPF 25
>sp|GLRX1_VARV|GLUTAREDOXIN-1 virus
Query: 2 LTCPF 6
TCPF
Sbjct: 21 FTCPF 25
>sp|GLRX1_VAR67|GLUTAREDOXIN-1 virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 LTCPF 6
TCPF
Sbjct: 21 FTCPF 25
>sp|EBNA6_EBVB9|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 CPFVPF 9
CP +PF
Sbjct: 915 CPSMPF 920
>sp|GLRX1_MONPV|GLUTAREDOXIN-1 virus (MPXV)
Query: 2 LTCPF 6
TCPF
Sbjct: 21 FTCPF 25
>sp|CAPSP_ADE02|PENTON protein|Human adenovirus C serotype 2
Query: 3 TCPFV 7
TCP+V
Sbjct: 550 TCPYV 554
>sp|CAPSP_ADE05|PENTON protein|Human adenovirus C serotype 5
Query: 3 TCPFV 7
TCP+V
Sbjct: 550 TCPYV 554
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 1 LLTCPFV 7
+LTC FV
Sbjct: 372 ILTCRFV 378
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 3 TCPF 6
TCPF
Sbjct: 385 TCPF 388
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 TCPF 6
TCPF
Sbjct: 385 TCPF 388
>sp|EBNA6_EBVA8|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 CPFVPF 9
CP +PF
Sbjct: 992 CPSMPF 997
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 1 LLTCPFV 7
+LTC FV
Sbjct: 372 ILTCRFV 378
2|SequenceR|15|6|PFPPALLTCP
>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37
Query: 2 FPPALLT 8
FPP LLT
Sbjct: 519 FPPLLLT 525
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 2 FPPALLT 8
FPP LLT
Sbjct: 514 FPPLLLT 520
>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17
Query: 2 FPPALLT 8
FPP LLT
Sbjct: 519 FPPLLLT 525
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 2 FPPALLT 8
FPP LLT
Sbjct: 514 FPPLLLT 520
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 2 FPPALLT 8
FPP LLT
Sbjct: 513 FPPLLLT 519
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 2 FPPALLT 8
FPP LLT
Sbjct: 516 FPPLLLT 522
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 2 FPPALLT 8
FPP LLT
Sbjct: 516 FPPLLLT 522
>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15
Query: 2 FPPALLT 8
FPP +LT
Sbjct: 512 FPPLMLT 518
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 FPPALLTCP 10
+PP + CP
Sbjct: 1229 YPPLRVNCP 1237
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 FPPALLTCP 10
+PP + CP
Sbjct: 1229 YPPLRVNCP 1237
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 FPPALLTCP 10
+PP + CP
Sbjct: 1229 YPPLRVNCP 1237
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 FPPALLTCP 10
+PP + CP
Sbjct: 1229 YPPLRVNCP 1237
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 FPPALLTCP 10
+PP + CP
Sbjct: 1229 YPPLRVNCP 1237
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 2 FPPALLT 8
FPP L+T
Sbjct: 519 FPPLLIT 525
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 2 FPPALLT 8
FPP +LT
Sbjct: 515 FPPLILT 521
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 2 FPPALLT 8
FPP L+T
Sbjct: 517 FPPLLIT 523
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 2 FPPALLT 8
FPP +LT
Sbjct: 515 FPPLMLT 521
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 3 PPALLTCP 10
PPA LT P
Sbjct: 744 PPARLTIP 751
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 2 FPPALLTC 9
+ PALLTC
Sbjct: 146 YLPALLTC 153
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 2 FPPALLTC 9
F P LL C
Sbjct: 74 FQPLLLNC 81
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 PFPPALLTC 9
PFP A +TC
Sbjct: 583 PFPLANVTC 591
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 1 PFPPALLTC 9
PFP A +TC
Sbjct: 583 PFPLANVTC 591
>sp|ICP22_HHV2H|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (strain HG52)
Query: 1 PFPPALLTCP 10
P PPAL T P
Sbjct: 6 PDPPALNTTP 15
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 1 PFPPALLTC 9
PFP A +TC
Sbjct: 583 PFPLANVTC 591
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 1 PFPPALLTC 9
PFP A +TC
Sbjct: 583 PFPLANVTC 591
>sp|US13_HCMVM|MEMBRANE protein US13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 FPPALLTC 9
F P+LL C
Sbjct: 75 FAPSLLWC 82
>sp|US13_HCMVA|UNCHARACTERIZED protein HVLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 FPPALLTC 9
F P+LL C
Sbjct: 75 FAPSLLWC 82
3|SequenceR|20|11|DLGLVPFPPA
>sp|VE2_HPV50|REGULATORY protein E2|Human papillomavirus type 50
Query: 2 LGLVPFPPA 10
LGL P PPA
Sbjct: 60 LGLQPLPPA 68
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 5 VPFPP 9
VPFPP
Sbjct: 1017 VPFPP 1021
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 1 DLGLVPFPP 9
++GL FPP
Sbjct: 164 NIGLRQFPP 172
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 DLGLVPFPP 9
++GL FPP
Sbjct: 487 NIGLRQFPP 495
>sp|VL2_HPV57|MINOR capsid protein L2|Human papillomavirus 57
Query: 1 DLGLVPFPP 9
D+GL P PP
Sbjct: 82 DVGLAPRPP 90
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 DLGLVPFP 8
+LG VP P
Sbjct: 534 ELGAVPLP 541
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 1 DLGLVPFP 8
D+GLV FP
Sbjct: 90 DVGLVIFP 97
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 2 LGLVPFPP 9
+GL FPP
Sbjct: 101 IGLRNFPP 108
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 DLGLVPFP 8
D+GLV FP
Sbjct: 90 DVGLVIFP 97
>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)
Query: 4 LVPFPPA 10
L PFPPA
Sbjct: 635 LEPFPPA 641
>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)
Query: 4 LVPFPPA 10
L PFPPA
Sbjct: 635 LEPFPPA 641
>sp|VL2_HPV27|MINOR capsid protein L2|Human papillomavirus 27
Query: 1 DLGLVPFPP 9
D+G+ P PP
Sbjct: 81 DIGVAPKPP 89
4|SequenceR|25|16|GVGRSDLGLV
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GVGRSDLGLV 10
G+G++ +GL+
Sbjct: 2169 GIGKTSIGLI 2178
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GVGRSDLGLV 10
G+G++ +GL+
Sbjct: 2169 GIGKTSIGLI 2178
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GVGRSDLGLV 10
G+G++ +GL+
Sbjct: 2169 GIGKTSIGLI 2178
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GVGRSDLGLV 10
G+G++ +GL+
Sbjct: 2169 GIGKTSIGLI 2178
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GVGRSDLGLV 10
G+G++ +GL+
Sbjct: 2169 GIGKTSIGLI 2178
>sp|GL_HHV11|ENVELOPE glycoprotein L|Human herpesvirus 1 (strain 17)
Query: 2 VGRSDLG 8
VGR DLG
Sbjct: 161 VGRQDLG 167
>sp|GL_HHV1K|ENVELOPE glycoprotein L|Human herpesvirus 1 (strain KOS)
Query: 2 VGRSDLG 8
VGR DLG
Sbjct: 161 VGRQDLG 167
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 2 VGRSDL 7
VGRSDL
Sbjct: 624 VGRSDL 629
>sp|UL49_HHV8P|PROTEIN ORF66|Human herpesvirus 8 type P
Query: 1 GVGRSDLGL 9
G+G +D GL
Sbjct: 196 GIGAADTGL 204
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 5 SDLGLV 10
SDLGLV
Sbjct: 1033 SDLGLV 1038
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GVGRSDLGLV 10
G+G+ +GL+
Sbjct: 2169 GIGKLSMGLI 2178
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GVGRSDLGLV 10
G+G+ +GL+
Sbjct: 2169 GIGKLSMGLI 2178
>sp|AN_HHV2|ALKALINE nuclease|Human herpesvirus 2 (HHV-2) (Human
Query: 2 VGRSDLGL 9
VGR+D G+
Sbjct: 282 VGRADAGV 289
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GVGRSDLGLV 10
G+G+ +GL+
Sbjct: 2169 GIGKLSMGLI 2178
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GVGRSDLGLV 10
G+G+ +GL+
Sbjct: 2169 GIGKLSMGLI 2178
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GVGRSDLGLV 10
G+G++ +GL+
Sbjct: 2170 GLGKTSIGLL 2179
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GVGRSDLGLV 10
G+G++ +GL+
Sbjct: 2171 GLGKTSIGLL 2180
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GVGRSDLGLV 10
G+G++ +GL+
Sbjct: 2171 GLGKTSIGLL 2180
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GVGRSDLGLV 10
G+G+ +GL+
Sbjct: 2169 GIGKLSVGLI 2178
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 3 GRSDLGL 9
GR+D+G+
Sbjct: 2546 GRTDVGI 2552
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 GVGRSDL 7
G+G SDL
Sbjct: 209 GLGNSDL 215
5|SequenceR|30|21|SNMLGGVGRS
>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)
Query: 1 SNMLGGVGRS 10
S LGG+GR+
Sbjct: 337 SEFLGGIGRA 346
>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 SNMLGGVGRS 10
S LGG+GR+
Sbjct: 337 SEFLGGIGRA 346
>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann
Query: 1 SNMLGGVGRS 10
S LGG+GR+
Sbjct: 337 SEFLGGIGRA 346
>sp|NCAP_I83A2|NUCLEOPROTEIN A virus (strain A/Ohio/4/1983
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MIGGIGR 38
>sp|NCAP_I83A1|NUCLEOPROTEIN A virus (strain A/Chile/1/1983
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MIGGIGR 38
>sp|NCAP_I07A0|NUCLEOPROTEIN A virus (strain A/USA:Texas/UR06-0195/2007
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MIGGIGR 38
>sp|NCAP_I96A3|NUCLEOPROTEIN A virus (strain A/China:Nanchang/11/1996
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MIGGIGR 38
>sp|NCAP_I96A2|NUCLEOPROTEIN A virus (strain A/USA:Memphis/10/1996
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MIGGIGR 38
>sp|NCAP_I80AA|NUCLEOPROTEIN A virus (strain A/India/6263/1980
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MIGGIGR 38
>sp|NCAP_I00A1|NUCLEOPROTEIN A virus (strain A/New
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MIGGIGR 38
>sp|NCAP_I88A7|NUCLEOPROTEIN A virus (strain A/Wisconsin/3523/1988
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MIGGIGR 38
>sp|NCAP_I88A5|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/17672/1988
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MIGGIGR 38
>sp|NCAP_I35A3|NUCLEOPROTEIN A virus (strain A/USA:Phila/1935
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MIGGIGR 38
>sp|NCAP_I34A1|NUCLEOPROTEIN A virus (strain A/Puerto
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MIGGIGR 38
>sp|NCAP_I33A0|NUCLEOPROTEIN A virus (strain A/Wilson-Smith/1933
Query: 2 NMLGGVGR 9
M+GG+GR
Sbjct: 31 KMIGGIGR 38
>sp|NCAP_I79A5|NUCLEOPROTEIN A virus (strain A/Swine/Italy/2/1979
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MIGGIGR 38
>sp|NCAP_I76AF|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1976/1931
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MIGGIGR 38
>sp|NCAP_I54A0|NUCLEOPROTEIN A virus (strain A/Leningrad/1/1954
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MIGGIGR 38
>sp|NCAP_I43A0|NUCLEOPROTEIN A virus (strain A/USA:Iowa/1943
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MIGGIGR 38
>sp|NCAP_I36A0|NUCLEOPROTEIN A virus (strain A/Henry/1936
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MIGGIGR 38
>sp|NCAP_I35A2|NUCLEOPROTEIN A virus (strain A/Swine/Ohio/23/1935
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MIGGIGR 38
>sp|NCAP_I06A0|NUCLEOPROTEIN A virus (strain A/Russia:St.Petersburg/8/2006
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MIGGIGR 38
>sp|NCAP_I76A7|NUCLEOPROTEIN A virus (strain A/New
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MIGGIGR 38
>sp|NCAP_I60A0|NUCLEOPROTEIN A virus (strain A/Ann
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MIGGIGR 38
>sp|NCAP_I30A0|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/15/1930
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MIGGIGR 38
>sp|NCAP_I81A1|NUCLEOPROTEIN A virus (strain A/Swine/Italy/141/1981
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MIGGIGR 38
>sp|NCAP_I77AC|NUCLEOPROTEIN A virus (strain A/Swine/Tennessee/24/1977
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MIGGIGR 38
>sp|NCAP_I49A2|NUCLEOPROTEIN A virus (strain A/Swine/41/1949
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MIGGIGR 38
>sp|NCAP_I46A1|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1946
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MIGGIGR 38
>sp|NCAP_I42A0|NUCLEOPROTEIN A virus (strain A/Swine/Jamesburg/1942
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MIGGIGR 38
>sp|NCAP_I37A0|NUCLEOPROTEIN A virus (strain A/Swine/29/1937
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MIGGIGR 38
>sp|NCAP_I18A0|NUCLEOPROTEIN A virus (strain A/Brevig
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MIGGIGR 38
>sp|NCAP_I81A4|NUCLEOPROTEIN A virus (strain A/Swine/Ontario/2/1981
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MIGGIGR 38
>sp|NCAP_I76AG|NUCLEOPROTEIN A virus (strain A/Swine/Italy/437/1976
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MIGGIGR 38
>sp|NCAP_I67A2|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1967
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MIGGIGR 38
>sp|NCAP_I61A1|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1961
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MIGGIGR 38
>sp|NCAP_I82A7|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MIGGIGR 38
>sp|NCAP_I57A7|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1957
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MIGGIGR 38
>sp|NCAP_I54A1|NUCLEOPROTEIN A virus (strain A/Swine/May/1954
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MIGGIGR 38
>sp|VU3_HHV6Z|PROTEIN U3|Human herpesvirus 6B (strain Z29)
Query: 3 MLGGVGR 9
+LGG GR
Sbjct: 155 LLGGAGR 161
>sp|VU3_HHV6U|PROTEIN U3|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 MLGGVGR 9
+LGG GR
Sbjct: 142 LLGGAGR 148
>sp|NCAP_I85A4|NUCLEOPROTEIN A virus (strain A/Swine/Netherlands/12/1985
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MVGGIGR 38
>sp|NCAP_I47A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MVGGIGR 38
>sp|NCAP_I73A4|NUCLEOPROTEIN A virus (strain A/Equine/London/1416/1973
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MVGGIGR 38
>sp|NCAP_I97A1|NUCLEOPROTEIN A virus (strain A/Hong
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MVGGIGR 38
>sp|NCAP_I01A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MVGGIGR 38
>sp|NCAP_I01A0|NUCLEOPROTEIN A virus (strain A/Silky
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MVGGIGR 38
>sp|NCAP_I96A0|NUCLEOPROTEIN A virus (strain A/Goose/Guangdong/1/1996
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MVGGIGR 38
>sp|NCAP_I89A6|NUCLEOPROTEIN A virus (strain A/Swine/Italy/839/1989
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MVGGIGR 38
>sp|NCAP_I81A3|NUCLEOPROTEIN A virus (strain A/Turkey/Minnesota/1661/1981
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MVGGIGR 38
>sp|NCAP_I81A0|NUCLEOPROTEIN A virus (strain A/Swine/Germany/2/1981
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MVGGIGR 38
>sp|NCAP_I80A5|NUCLEOPROTEIN A virus (strain A/Teal/Iceland/29/1980
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MVGGIGR 38
>sp|NCAP_I80A2|NUCLEOPROTEIN A virus (strain A/Seal/Massachusetts/1/1980
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MVGGIGR 38
>sp|NCAP_I77A3|NUCLEOPROTEIN A virus (strain A/Duck/Bavaria/2/1977
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MVGGIGR 38
>sp|NCAP_I75A2|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MVGGIGR 38
>sp|NCAP_I27A0|NUCLEOPROTEIN A virus (strain A/Fowl
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MVGGIGR 38
>sp|NCAP_I02A7|NUCLEOPROTEIN A virus (strain A/Teal/China/2978.1/2002
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MVGGIGR 38
>sp|NCAP_I01A1|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MVGGIGR 38
>sp|NCAP_I00A0|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MVGGIGR 38
>sp|NCAP_I82A4|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MVGGIGR 38
>sp|NCAP_I80A1|NUCLEOPROTEIN A virus (strain A/Duck/Australia/749/1980
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MVGGIGR 38
>sp|NCAP_I78A3|NUCLEOPROTEIN A virus (strain A/Mallard/New
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MVGGIGR 38
>sp|NCAP_I59A0|NUCLEOPROTEIN A virus (strain A/Chicken/Scotland/1959
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MVGGIGR 38
>sp|NCAP_I56A3|NUCLEOPROTEIN A virus (strain A/Equine/Prague/1/1956
Query: 3 MLGGVGR 9
M+GG+GR
Sbjct: 32 MVGGIGR 38
>sp|Y104_ADE07|UNCHARACTERIZED 10.4 kDa early protein|Human adenovirus B serotype 7
Query: 3 MLGGVGRS 10
++GG+G+S
Sbjct: 36 LVGGIGQS 43
>sp|PG042_VACCC|VIRION nicking-joining enzyme|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SNMLGGV 7
+N+LGGV
Sbjct: 107 TNILGGV 113
>sp|PG042_MONPV|VIRION nicking-joining enzyme|Monkeypox virus (MPXV)
Query: 1 SNMLGGV 7
+N+LGGV
Sbjct: 107 TNILGGV 113
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 4 LGGVGRS 10
LGG+G++
Sbjct: 700 LGGIGKT 706
>sp|CAP8_ADE40|PRE-HEXON-LINKING protein VIII|Human adenovirus F serotype 40
Query: 3 MLGGVGRS 10
LGG GRS
Sbjct: 159 QLGGAGRS 166
>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 4 LGGVGRS 10
LGG GR+
Sbjct: 493 LGGTGRN 499
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 2 NMLGGVGRS 10
+M GG GR+
Sbjct: 674 SMAGGSGRT 682
>sp|CAP8_ADE41|PRE-HEXON-LINKING protein VIII|Human adenovirus F serotype 41
Query: 3 MLGGVGRS 10
LGG GRS
Sbjct: 159 QLGGAGRS 166
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 MLGGVG 8
M+GG+G
Sbjct: 535 MIGGIG 540
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 MLGGVG 8
M+GG+G
Sbjct: 544 MIGGIG 549
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 MLGGVG 8
M+GG+G
Sbjct: 544 MIGGIG 549
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 MLGGVG 8
M+GG+G
Sbjct: 534 MIGGIG 539
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 MLGGVG 8
M+GG+G
Sbjct: 528 MIGGIG 533
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 MLGGVG 8
M+GG+G
Sbjct: 535 MIGGIG 540
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 MLGGVG 8
M+GG+G
Sbjct: 532 MIGGIG 537
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 MLGGVG 8
M+GG+G
Sbjct: 531 MIGGIG 536
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 MLGGVG 8
M+GG+G
Sbjct: 531 MIGGIG 536
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 MLGGVG 8
M+GG+G
Sbjct: 535 MIGGIG 540
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 MLGGVG 8
M+GG+G
Sbjct: 533 MIGGIG 538
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 MLGGVG 8
M+GG+G
Sbjct: 531 MIGGIG 536
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 MLGGVG 8
M+GG+G
Sbjct: 534 MIGGIG 539
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 MLGGVG 8
M+GG+G
Sbjct: 535 MIGGIG 540
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 MLGGVG 8
M+GG+G
Sbjct: 529 MIGGIG 534
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 MLGGVG 8
M+GG+G
Sbjct: 540 MIGGIG 545
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 MLGGVG 8
M+GG+G
Sbjct: 539 MIGGIG 544
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 MLGGVG 8
M+GG+G
Sbjct: 533 MIGGIG 538
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 MLGGVG 8
M+GG+G
Sbjct: 534 MIGGIG 539
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 MLGGVG 8
M+GG+G
Sbjct: 538 MIGGIG 543
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 MLGGVG 8
M+GG+G
Sbjct: 534 MIGGIG 539
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 MLGGVG 8
M+GG+G
Sbjct: 538 MIGGIG 543
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 MLGGVG 8
M+GG+G
Sbjct: 534 MIGGIG 539
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 MLGGVG 8
M+GG+G
Sbjct: 546 MIGGIG 551
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 MLGGVG 8
M+GG+G
Sbjct: 534 MIGGIG 539
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 MLGGVG 8
M+GG+G
Sbjct: 546 MIGGIG 551
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 MLGGVG 8
M+GG+G
Sbjct: 546 MIGGIG 551
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 MLGGVG 8
M+GG+G
Sbjct: 533 MIGGIG 538
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 MLGGVG 8
M+GG+G
Sbjct: 536 MIGGIG 541
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 MLGGVG 8
M+GG+G
Sbjct: 534 MIGGIG 539
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 MLGGVG 8
M+GG+G
Sbjct: 529 MIGGIG 534
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 MLGGVG 8
M+GG+G
Sbjct: 529 MIGGIG 534
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 MLGGVG 8
M+GG+G
Sbjct: 529 MIGGIG 534
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 MLGGVG 8
M+GG+G
Sbjct: 530 MIGGIG 535
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 MLGGVG 8
M+GG+G
Sbjct: 534 MIGGIG 539
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 SNMLGGVGRS 10
SN+L +G++
Sbjct: 2057 SNILAAIGKN 2066
>sp|GLYCO_RABVI|GLYCOPROTEIN virus (strain India) (RABV)
Query: 4 LGGVGR 9
LGG GR
Sbjct: 493 LGGTGR 498
>sp|CAP8_ADE12|PRE-HEXON-LINKING protein VIII|Human adenovirus A serotype 12
Query: 4 LGGVGRS 10
LGG GRS
Sbjct: 160 LGGSGRS 166
6|SequenceR|35|26|QPPPFSNMLG
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 2 PPPFS 6
PPPFS
Sbjct: 148 PPPFS 152
>sp|PORTL_HHV8P|PORTAL protein|Human herpesvirus 8 type P
Query: 3 PPFSNMLG 10
PPF N+ G
Sbjct: 557 PPFENVPG 564
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 2 PPPFS 6
PPPF+
Sbjct: 52 PPPFN 56
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 PPPFS 6
PPPF+
Sbjct: 52 PPPFN 56
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 2 PPPFS 6
PPPF+
Sbjct: 52 PPPFN 56
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PPPFS 6
PPPF+
Sbjct: 52 PPPFN 56
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 2 PPPFS 6
PPPF+
Sbjct: 52 PPPFN 56
>sp|MAT_INCTA|POLYPROTEIN p42|Influenza C virus (strain C/Taylor/1233/1947)
Query: 2 PPPFSN 7
P PFSN
Sbjct: 363 PIPFSN 368
>sp|MAT_INCJJ|POLYPROTEIN p42|Influenza C virus (strain C/JJ/1950)
Query: 2 PPPFSN 7
P PFSN
Sbjct: 363 PIPFSN 368
>sp|MAT_INCHY|POLYPROTEIN p42|Influenza C virus (strain C/Hyogo/1/1983)
Query: 2 PPPFSN 7
P PFSN
Sbjct: 363 PIPFSN 368
>sp|MAT_INCCA|POLYPROTEIN p42|Influenza C virus (strain C/California/1978)
Query: 2 PPPFSN 7
P PFSN
Sbjct: 363 PIPFSN 368
>sp|MAT_INCAA|POLYPROTEIN p42|Influenza C virus (strain C/Ann
Query: 2 PPPFSN 7
P PFSN
Sbjct: 363 PIPFSN 368
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 2 PPPFSNML 9
P PF N L
Sbjct: 1988 PSPFQNTL 1995
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 PPPFSNML 9
P PF N L
Sbjct: 2006 PSPFQNTL 2013
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 2 PPPFSNML 9
P PF N L
Sbjct: 2057 PSPFQNTL 2064
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 PPPFSNML 9
P PF N L
Sbjct: 2090 PSPFQNTL 2097
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 PPPFSNML 9
P PF N L
Sbjct: 2090 PSPFQNTL 2097
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 PPPFSNML 9
P PF N L
Sbjct: 2091 PSPFQNTL 2098
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 2 PPPFSNML 9
P PF N L
Sbjct: 2014 PSPFQNTL 2021
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 2 PPPFSNML 9
P PF N L
Sbjct: 2051 PSPFQNTL 2058
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 2 PPPFSNML 9
P PF N L
Sbjct: 2044 PSPFQNTL 2051
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 2 PPPFSNML 9
P PF N L
Sbjct: 2044 PSPFQNTL 2051
>sp|KITH_VARV|THYMIDINE kinase|Variola virus
Query: 1 QPPPFSNML 9
Q PF+N+L
Sbjct: 114 QRKPFNNIL 122
>sp|KITH_VAR67|THYMIDINE kinase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 QPPPFSNML 9
Q PF+N+L
Sbjct: 114 QRKPFNNIL 122
>sp|KITH_VACCT|THYMIDINE kinase|Vaccinia virus (strain Tian Tan)
Query: 1 QPPPFSNML 9
Q PF+N+L
Sbjct: 114 QRKPFNNIL 122
>sp|KITH_VACCC|THYMIDINE kinase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 QPPPFSNML 9
Q PF+N+L
Sbjct: 114 QRKPFNNIL 122
>sp|KITH_VACCA|THYMIDINE kinase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 QPPPFSNML 9
Q PF+N+L
Sbjct: 114 QRKPFNNIL 122
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 QPPPFSN 7
Q PPFS+
Sbjct: 629 QEPPFSS 635
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 PPPFSNML 9
P PF N L
Sbjct: 2051 PSPFQNTL 2058
>sp|CAPSD_HASV5|CAPSID polyprotein VP90|Human astrovirus-5 (HAstV-5)
Query: 2 PPPFS 6
PPPF+
Sbjct: 338 PPPFN 342
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 2 PPPFSNML 9
P PF N L
Sbjct: 726 PSPFQNTL 733
>sp|UL35_HCMVA|PROTEIN UL35|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QPPPFSNM 8
PPPF+ +
Sbjct: 192 HPPPFTTV 199
>sp|UL35_HCMVM|TEGUMENT protein UL35|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QPPPFSNM 8
PPPF+ +
Sbjct: 192 HPPPFTTV 199
>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)
Query: 2 PPPFS 6
PPPF+
Sbjct: 339 PPPFN 343
>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)
Query: 2 PPPFS 6
PPPF+
Sbjct: 339 PPPFN 343
>sp|CAPSD_HASV6|CAPSID polyprotein VP90|Human astrovirus-6 (HAstV-6)
Query: 2 PPPFS 6
PPPF+
Sbjct: 339 PPPFN 343
>sp|CAPSD_HASVA|CAPSID polyprotein VP86|Human astrovirus VA1 (HAstV-VA1) (Mamastrovirus
Query: 2 PPPFS 6
PPPF+
Sbjct: 324 PPPFT 328
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 2 PPPFS 6
PPPF+
Sbjct: 339 PPPFN 343
>sp|CAPSD_HASV8|CAPSID polyprotein VP90|Human astrovirus-8 (HAstV-8)
Query: 2 PPPFS 6
PPPF+
Sbjct: 339 PPPFN 343
7|SequenceR|40|31|NQAHGQPPPF
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 4 HGQPPP 9
HG PPP
Sbjct: 335 HGSPPP 340
>sp|VP35_EBOZ5|POLYMERASE cofactor VP35|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 4 HGQPPP 9
HGQPPP
Sbjct: 166 HGQPPP 171
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 4 HGQPPP 9
HG PPP
Sbjct: 335 HGSPPP 340
>sp|VP35_EBOZM|POLYMERASE cofactor VP35|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 4 HGQPPP 9
HGQPPP
Sbjct: 166 HGQPPP 171
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 1 NQAHGQPPP 9
N H Q PP
Sbjct: 469 NNEHSQTPP 477
>sp|E434_ADE40|EARLY E4 34 kDa protein|Human adenovirus F serotype 40
Query: 2 QAHGQPPP 9
Q H PPP
Sbjct: 16 QTHRLPPP 23
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 QAHGQPPP 9
++ GQPPP
Sbjct: 2350 KSFGQPPP 2357
>sp|VP35_MABVA|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Angola/2005)
Query: 4 HGQPPP 9
HG PPP
Sbjct: 155 HGVPPP 160
>sp|VP35_MABVO|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 4 HGQPPP 9
HG PPP
Sbjct: 155 HGVPPP 160
>sp|VP35_MABVM|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Musoke-80)
Query: 4 HGQPPP 9
HG PPP
Sbjct: 155 HGVPPP 160
>sp|RIR2_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 HGQPPP 9
+G PPP
Sbjct: 265 YGTPPP 270
>sp|RIR2_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 HGQPPP 9
+G PPP
Sbjct: 265 YGTPPP 270
>sp|RIR2_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 HGQPPP 9
+G PPP
Sbjct: 265 YGTPPP 270
>sp|VP35_MABVP|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Popp-67)
Query: 4 HGQPPP 9
HG PPP
Sbjct: 155 HGVPPP 160
>sp|VP35_MABVR|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ravn-87)
Query: 4 HGQPPP 9
HG PPP
Sbjct: 155 HGVPPP 160
>sp|VP35_EBORE|POLYMERASE cofactor VP35|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 QAHGQPPP 9
+ H QPPP
Sbjct: 153 KEHKQPPP 160
>sp|VP35_EBORR|POLYMERASE cofactor VP35|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 QAHGQPPP 9
+ H QPPP
Sbjct: 153 KEHKQPPP 160
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 1 NQAHGQP 7
NQ H QP
Sbjct: 141 NQTHCQP 147
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 NQAHGQPPPF 10
+Q H + PPF
Sbjct: 806 DQKHQKEPPF 815
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 NQAHGQP 7
NQ H QP
Sbjct: 138 NQTHCQP 144
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 NQAHGQPPP 9
NQ HG P
Sbjct: 401 NQTHGNYAP 409
>sp|VP35_EBOSU|POLYMERASE cofactor VP35|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 4 HGQPPP 9
HGQ PP
Sbjct: 155 HGQAPP 160
>sp|PHOSP_PI4HB|PHOSPHOPROTEIN parainfluenza 4b virus (strain
Query: 3 AHGQPPP 9
A QPPP
Sbjct: 30 ATSQPPP 36
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 NQAHGQPPPF 10
N++H PP
Sbjct: 2392 NESHSSMPPL 2401
>sp|OX2V_HHV8P|OX-2 membrane glycoprotein homolog|Human herpesvirus 8 type P
Query: 3 AHGQPPP 9
A G+PPP
Sbjct: 150 ATGRPPP 156
>sp|CVC2_HHV8P|CAPSID vertex component 2|Human herpesvirus 8 type P
Query: 3 AHGQPPPF 10
+H QP PF
Sbjct: 455 SHKQPGPF 462
>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)
Query: 3 AHGQPPPF 10
AH PP F
Sbjct: 474 AHAPPPAF 481
8|SequenceR|45|36|GVQLPNQAHG
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 2 VQLPNQAHG 10
++ P Q HG
Sbjct: 635 LEFPKQGHG 643
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 4 LPNQAH 9
LPN AH
Sbjct: 1380 LPNMAH 1385
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 2 VQLPNQAH 9
V LP+ AH
Sbjct: 419 VTLPDHAH 426
>sp|UNG_HHV2H|URACIL-DNA glycosylase|Human herpesvirus 2 (strain HG52)
Query: 5 PNQAHG 10
P QAHG
Sbjct: 104 PGQAHG 109
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 2 VQLPNQAHG 10
+ P Q HG
Sbjct: 643 LNFPTQGHG 651
>sp|UNG_HHV11|URACIL-DNA glycosylase|Human herpesvirus 1 (strain 17)
Query: 5 PNQAHG 10
P QAHG
Sbjct: 183 PGQAHG 188
>sp|UNG_HHV23|URACIL-DNA glycosylase|Human herpesvirus 2 (strain 333)
Query: 5 PNQAHG 10
P QAHG
Sbjct: 144 PGQAHG 149
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 1 GVQLPNQAHG 10
G++ PN + G
Sbjct: 1113 GIEKPNPSEG 1122
>sp|NRAM_I01A1|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 4 LPNQAHG 10
LPN A+G
Sbjct: 339 LPNGAYG 345
>sp|DNB2_ADE41|DNA-BINDING protein|Human adenovirus F serotype 41
Query: 2 VQLPNQAHG 10
+Q+P Q H
Sbjct: 36 LQVPEQVHA 44
9|SequenceR|50|41|SQLEAGVQLP
>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)
Query: 1 SQLEAGVQLP 10
SQ+++ ++LP
Sbjct: 228 SQMQSNIKLP 237
>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 SQLEAGVQLP 10
SQ+++ ++LP
Sbjct: 228 SQMQSNIKLP 237
>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann
Query: 1 SQLEAGVQLP 10
SQ+++ ++LP
Sbjct: 228 SQMQSNIKLP 237
>sp|DUT_HCMVM|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain
Query: 3 LEAGVQLP 10
LE+G+Q+P
Sbjct: 169 LESGLQVP 176
>sp|US22_HCMVM|TEGUMENT protein US22|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 EAGVQLP 10
E GV+LP
Sbjct: 466 ECGVELP 472
>sp|US22_HCMVA|EARLY nuclear protein HWLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 EAGVQLP 10
E GV+LP
Sbjct: 466 ECGVELP 472
10|SequenceR|55|46|SAFFRSQLEA
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 4 FRSQLE 9
FRSQLE
Sbjct: 1473 FRSQLE 1478
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 4 FRSQLE 9
FRSQLE
Sbjct: 1472 FRSQLE 1477
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 4 FRSQLE 9
FRSQLE
Sbjct: 1472 FRSQLE 1477
>sp|PG099_MONPV|ENTRY-FUSION complex protein OPG094|Monkeypox virus (MPXV)
Query: 3 FFRSQL 8
FFRS+L
Sbjct: 46 FFRSEL 51
>sp|PG099_VARV|ENTRY-FUSION complex protein OPG094|Variola virus
Query: 3 FFRSQL 8
FFRS+L
Sbjct: 46 FFRSEL 51
>sp|PG099_VAR67|ENTRY-FUSION complex protein OPG094|Variola virus (isolate
Query: 3 FFRSQL 8
FFRS+L
Sbjct: 46 FFRSEL 51
>sp|PG099_VACCA|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Ankara) (VACV)
Query: 3 FFRSQL 8
FFRS+L
Sbjct: 46 FFRSEL 51
>sp|PG099_VACCC|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 FFRSQL 8
FFRS+L
Sbjct: 46 FFRSEL 51
11|SequenceR|60|51|QACGQSAFFR
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 1 QACGQSAFF 9
+ACGQ+ F+
Sbjct: 845 RACGQTQFY 853
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 QACGQSAFF 9
+ACGQ+ F+
Sbjct: 839 KACGQTQFY 847
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 QACGQSAFF 9
+ACGQ+ F+
Sbjct: 839 KACGQTQFY 847
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 QACGQSAFF 9
+ACGQ+ F+
Sbjct: 839 KACGQTQFY 847
>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong
Query: 4 GQSAFFR 10
G+S+FFR
Sbjct: 155 GKSSFFR 161
>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 4 GQSAFFR 10
G+S+FFR
Sbjct: 147 GKSSFFR 153
>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 4 GQSAFFR 10
G+S+FFR
Sbjct: 155 GKSSFFR 161
>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky
Query: 4 GQSAFFR 10
G+S+FFR
Sbjct: 155 GKSSFFR 161
>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 4 GQSAFFR 10
G+S+FFR
Sbjct: 155 GKSSFFR 161
>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 4 GQSAFFR 10
G+S+FFR
Sbjct: 155 GKSSFFR 161
>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea
Query: 4 GQSAFFR 10
G+S+FFR
Sbjct: 153 GKSSFFR 159
>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 4 GQSAFFR 10
G+S+FFR
Sbjct: 144 GKSSFFR 150
>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 4 GQSAFFR 10
G+S+FFR
Sbjct: 144 GKSSFFR 150
>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky
Query: 4 GQSAFFR 10
G+S+FFR
Sbjct: 144 GKSSFFR 150
>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 4 GQSAFFR 10
G+S+FFR
Sbjct: 155 GKSSFFR 161
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 QACGQSAFFR 10
QACGQ R
Sbjct: 1273 QACGQEGRTR 1282
>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong
Query: 4 GQSAFFR 10
G+S+FFR
Sbjct: 155 GRSSFFR 161
>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 4 GQSAFFR 10
G+S+FFR
Sbjct: 155 GRSSFFR 161
>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996
Query: 4 GQSAFFR 10
G+S+FFR
Sbjct: 155 GRSSFFR 161
>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959
Query: 4 GQSAFFR 10
G+S+FFR
Sbjct: 155 GRSSFFR 161
>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003
Query: 4 GQSAFFR 10
G+S+FFR
Sbjct: 155 GRSSFFR 161
>sp|HEMA_I02A7|HEMAGGLUTININ A virus (strain A/Teal/China/2978.1/2002
Query: 4 GQSAFFR 10
G+S+FFR
Sbjct: 151 GRSSFFR 157
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 2 ACGQSAFFR 10
AC S FF+
Sbjct: 732 ACNPSVFFK 740
>sp|HEMA_I07A0|HEMAGGLUTININ A virus (strain A/USA:Texas/UR06-0195/2007
Query: 4 GQSAFFR 10
G+S+F+R
Sbjct: 156 GESSFYR 162
>sp|NCAP_PIV5|NUCLEOPROTEIN virus 5 (strain W3)
Query: 1 QACGQSAFF 9
+ CG FF
Sbjct: 262 ENCGMGGFF 270
>sp|VE2_HPV41|REGULATORY protein E2|Human papillomavirus type 41
Query: 1 QACGQSAFF 9
+ CG FF
Sbjct: 347 ERCGSGRFF 355
12|SequenceR|65|56|AQFPSQACGQ
>sp|GLYCO_VSNJO|GLYCOPROTEIN stomatitis New Jersey virus
Query: 3 FPSQACG 9
FP Q+CG
Sbjct: 125 FPPQSCG 131
>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 FPSQACG 9
FP Q+CG
Sbjct: 125 FPPQSCG 131
>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 FPSQACG 9
FP Q+CG
Sbjct: 125 FPPQSCG 131
>sp|U10_HHV6Z|PROTEIN U10|Human herpesvirus 6B (strain Z29)
Query: 2 QFPSQACG 9
QFP CG
Sbjct: 190 QFPEHECG 197
>sp|U10_HHV6H|PROTEIN U10|Human herpesvirus 6B (HHV-6 variant
Query: 2 QFPSQACG 9
QFP CG
Sbjct: 190 QFPEHECG 197
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 FPSQACG 9
FP Q+CG
Sbjct: 125 FPPQSCG 131
>sp|U10_HHV6U|U10 protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 QFPSQACG 9
QFP CG
Sbjct: 190 QFPEHECG 197
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 FPSQACG 9
FP Q+CG
Sbjct: 125 FPPQSCG 131
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 3 FPSQACG 9
FP Q+CG
Sbjct: 125 FPPQSCG 131
>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 FPSQACG 9
FP Q+CG
Sbjct: 125 FPPQSCG 131
>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 FPSQACG 9
FP Q+CG
Sbjct: 125 FPPQSCG 131
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 FPSQACG 9
FPSQA G
Sbjct: 536 FPSQAAG 542
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 FPSQACG 9
FPSQA G
Sbjct: 536 FPSQAAG 542
>sp|GLYCO_ISFV|GLYCOPROTEIN virus (ISFV)
Query: 3 FPSQACG 9
FP ++CG
Sbjct: 129 FPPESCG 135
>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)
Query: 3 FPSQACG 9
FP ++CG
Sbjct: 130 FPPESCG 136
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 QFPSQACGQ 10
Q P + CGQ
Sbjct: 549 QIPIEICGQ 557
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 QFPSQACGQ 10
Q P + CGQ
Sbjct: 544 QIPIEICGQ 552
>sp|U78_HHV6U|UNCHARACTERIZED protein U78|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 QFPSQACG 9
+FP + CG
Sbjct: 21 EFPPRLCG 28
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 QFPSQAC 8
Q P++AC
Sbjct: 1668 QIPTEAC 1674
>sp|VE6_HPV2A|PROTEIN E6|Human papillomavirus type 2a
Query: 3 FPSQACGQ 10
FP ACG+
Sbjct: 57 FPFGACGK 64
>sp|VE2_HPV24|REGULATORY protein E2|Human papillomavirus 24
Query: 2 QFPSQAC 8
Q P QAC
Sbjct: 227 QQPQQAC 233
>sp|VE6_HPV27|PROTEIN E6|Human papillomavirus 27
Query: 3 FPSQACGQ 10
FP ACG+
Sbjct: 63 FPFGACGK 70
13|SequenceR|70|61|PPAPAAQFPS
>sp|VIF_HV2ST|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 PPAPAAQFP 9
PPAP A FP
Sbjct: 197 PPAPRAYFP 205
>sp|VIF_HV2CA|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 PAPAAQFP 9
PAP A FP
Sbjct: 198 PAPGAYFP 205
>sp|VIF_HV2KR|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 PPAPAAQFP 9
PPA A FP
Sbjct: 197 PPASGAYFP 205
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PAPAAQFP 9
P AAQFP
Sbjct: 303 PTLAAQFP 310
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PAPAAQFP 9
P AAQFP
Sbjct: 303 PTLAAQFP 310
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PAPAAQFP 9
P AAQFP
Sbjct: 303 PTLAAQFP 310
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PAPAAQFP 9
P AAQFP
Sbjct: 303 PTLAAQFP 310
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PAPAAQFP 9
P AAQFP
Sbjct: 303 PTLAAQFP 310
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PAPAAQFP 9
P AAQFP
Sbjct: 303 PTLAAQFP 310
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PAPAAQFP 9
P AAQFP
Sbjct: 303 PTLAAQFP 310
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PAPAAQFP 9
P AAQFP
Sbjct: 303 PTLAAQFP 310
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PAPAAQFP 9
P AAQFP
Sbjct: 303 PTLAAQFP 310
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PAPAAQFP 9
P AAQFP
Sbjct: 303 PTLAAQFP 310
>sp|RIR2_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain HG52)
Query: 2 PAPAAQFP 9
PAP A FP
Sbjct: 302 PAPDASFP 309
>sp|RIR2_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain 333)
Query: 2 PAPAAQFP 9
PAP A FP
Sbjct: 302 PAPDASFP 309
>sp|VIF_HV2SB|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 PPAPAAQFP 9
PPA A FP
Sbjct: 197 PPAQGAYFP 205
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 PPAPAAQFP 9
PP + +FP
Sbjct: 1791 PPGTSNEFP 1799
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 PPAPAAQF 8
PPA +QF
Sbjct: 713 PPADTSQF 720
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 PPAPAAQF 8
PPA +QF
Sbjct: 713 PPADTSQF 720
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 PPAPAAQFP 9
PP A FP
Sbjct: 1792 PPGTAEAFP 1800
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 PPAPAAQFP 9
PP + +FP
Sbjct: 1807 PPGTSDEFP 1815
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 PPAPAAQFP 9
PP + +FP
Sbjct: 1807 PPGTSDEFP 1815
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 PPAPAAQFP 9
PP + +FP
Sbjct: 1802 PPGTSNEFP 1810
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 PPAPAAQFP 9
PP + +FP
Sbjct: 1807 PPGTSDEFP 1815
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 PPAPAAQFP 9
PP + +FP
Sbjct: 1807 PPGTSDEFP 1815
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 PPAPAAQFP 9
PP + +FP
Sbjct: 1807 PPGTSDEFP 1815
>sp|C_MEASA|PROTEIN C|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 PAPAAQFPS 10
P+P+A +PS
Sbjct: 14 PSPSAHWPS 22
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 PPAPAAQFP 9
PP + +FP
Sbjct: 1807 PPGTSDEFP 1815
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 PPAPAAQFP 9
PP + +FP
Sbjct: 1807 PPGTSDEFP 1815
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 PPAPAAQFP 9
PP + +FP
Sbjct: 1807 PPGTSDEFP 1815
>sp|C_MEASE|PROTEIN C|Measles virus (strain Edmonston) (MeV)
Query: 2 PAPAAQFPS 10
P+P+A +PS
Sbjct: 14 PSPSAHWPS 22
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 PPAPAAQFP 9
PP + +FP
Sbjct: 1807 PPGTSDEFP 1815
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 PPAPAAQFP 9
PP A FP
Sbjct: 1792 PPGTADAFP 1800
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 PPAPAAQFP 9
PP A FP
Sbjct: 1792 PPGTADAFP 1800
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 PPAPAAQFP 9
PP A FP
Sbjct: 1792 PPGTADAFP 1800
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 PPAPAAQFP 9
PP A FP
Sbjct: 1792 PPGTADAFP 1800
>sp|C_MEASI|PROTEIN C|Measles virus (strain IP-3-Ca) (MeV)
Query: 2 PAPAAQFPS 10
P+P+A +PS
Sbjct: 14 PSPSAHWPS 22
>sp|GAG_XMRV3|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 PPAPAAQFPS 10
PP P+AQ PS
Sbjct: 115 PPGPSAQPPS 124
>sp|C_MEASC|PROTEIN C|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 PAPAAQFPS 10
P+P+A +PS
Sbjct: 14 PSPSAHWPS 22
>sp|GAG_XMRV4|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 PPAPAAQFPS 10
PP P+AQ PS
Sbjct: 115 PPGPSAQPPS 124
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PAPAAQFP 9
P AAQFP
Sbjct: 303 PTLAAQFP 310
>sp|GAG_XMRV6|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 PPAPAAQFPS 10
PP P+AQ PS
Sbjct: 115 PPGPSAQPPS 124
>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23
Query: 2 PAPAAQ 7
P PAAQ
Sbjct: 142 PGPAAQ 147
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 PPAPAAQFPS 10
PP P+AQ PS
Sbjct: 115 PPGPSAQPPS 124
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 PPAPAAQFPS 10
PP P+AQ PS
Sbjct: 115 PPGPSAQPPS 124
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 PPAPAAQFPS 10
PP P+AQ PS
Sbjct: 115 PPGPSAQPPS 124
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PAPAAQFP 9
P AAQFP
Sbjct: 282 PTLAAQFP 289
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 PPAPAAQFP 9
PP P Q+P
Sbjct: 161 PPRPQKQYP 169
>sp|C_MEASY|PROTEIN C|Measles virus (strain Yamagata-1) (MeV)
Query: 2 PAPAAQFPS 10
P+P+A +PS
Sbjct: 14 PSPSAHWPS 22
14|SequenceR|75|66|AQPTPPPAPA
>sp|PG097_VARV|PROTEIN OPG097|Variola virus
Query: 2 QPTPPP 7
QP+PPP
Sbjct: 48 QPSPPP 53
>sp|PG097_VAR67|PROTEIN OPG097|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 QPTPPP 7
QP+PPP
Sbjct: 48 QPSPPP 53
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 4 TPPPAP 9
TPPP P
Sbjct: 1223 TPPPKP 1228
>sp|VE6_HPV19|PROTEIN E6|Human papillomavirus 19
Query: 2 QPTPPPAPA 10
Q T PP PA
Sbjct: 22 QVTEPPLPA 30
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PTPPPAPA 10
P PP AP
Sbjct: 440 PVPPAAPG 447
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PTPPPAPA 10
P PP AP
Sbjct: 440 PVPPAAPG 447
>sp|PG034_MONPV|PROTEIN OPG034|Monkeypox virus (MPXV)
Query: 3 PTPPPA 8
PTP PA
Sbjct: 86 PTPKPA 91
Query: 4 TPPPAPA 10
TP P PA
Sbjct: 85 TPTPKPA 91
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PTPPPAPA 10
P PP AP
Sbjct: 440 PVPPTAPG 447
>sp|GM_HHV8P|ENVELOPE glycoprotein M|Human herpesvirus 8 type P
Query: 5 PPPAPA 10
PPP PA
Sbjct: 357 PPPLPA 362
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 PTPPP 7
P+PPP
Sbjct: 1483 PSPPP 1487
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 PTPPP 7
P+PPP
Sbjct: 1483 PSPPP 1487
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 PTPPP 7
P+PPP
Sbjct: 1483 PSPPP 1487
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 PTPPP 7
P+PPP
Sbjct: 1483 PSPPP 1487
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 3 PTPPP 7
P+PPP
Sbjct: 1483 PSPPP 1487
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 PTPPP 7
P+PPP
Sbjct: 1483 PSPPP 1487
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 3 PTPPPAPA 10
P P P PA
Sbjct: 751 PLPAPKPA 758
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 PTPPP 7
P+PPP
Sbjct: 1483 PSPPP 1487
>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4
Query: 1 AQPTPPPAP 9
A+P P PAP
Sbjct: 173 AEPCPSPAP 181
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 PTPPP 7
P+PPP
Sbjct: 1073 PSPPP 1077
>sp|ICP27_VZVO|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Oka
Query: 2 QPTPPPA 8
+PT PPA
Sbjct: 143 RPTTPPA 149
>sp|ICP27_VZVD|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Dumas)
Query: 2 QPTPPPA 8
+PT PPA
Sbjct: 143 RPTTPPA 149
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 2 QPTPPPAPA 10
QPT PPA A
Sbjct: 1678 QPTAPPAQA 1686
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 AQPTPPPA 8
A P PP A
Sbjct: 1694 ASPDPPSA 1701
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 5 PPPAPA 10
PPP P
Sbjct: 2864 PPPPPG 2869
Query: 3 PTPPPA 8
P PPP
Sbjct: 2864 PPPPPG 2869
>sp|CAPSD_HEVRH|CAPSID protein|Hepatitis E virus (isolate Rhesus/HT-4)
Query: 2 QPTPPPAPA 10
+PTP PAP+
Sbjct: 319 RPTPSPAPS 327
>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P
Query: 4 TPPPAP 9
+PPP P
Sbjct: 385 SPPPLP 390
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 AQPTPPPA 8
A P PP A
Sbjct: 1705 ASPEPPSA 1712
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 AQPTPPPA 8
A P PP A
Sbjct: 1705 ASPEPPSA 1712
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 AQPTPPPA 8
A P PP A
Sbjct: 1705 ASPEPPSA 1712
>sp|CAPSD_HEVME|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 2
Query: 2 QPTPPPAPA 10
+PTP PAP+
Sbjct: 450 RPTPSPAPS 458
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 AQPTPPPAPA 10
A P P P PA
Sbjct: 215 AHPIPGPLPA 224
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 AQPTPPPA 8
A P PP A
Sbjct: 1705 ASPEPPSA 1712
>sp|CAPSD_HEVCT|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 4
Query: 2 QPTPPPAPA 10
+PTP PAP+
Sbjct: 449 RPTPSPAPS 457
>sp|CAPSD_HEVBU|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 QPTPPPAPA 10
+PTP PAP+
Sbjct: 451 RPTPSPAPS 459
>sp|CAPSD_HEVCH|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 QPTPPPAPA 10
+PTP PAP+
Sbjct: 451 RPTPSPAPS 459
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 2 QPTPPPAPA 10
QPTP APA
Sbjct: 561 QPTPSAAPA 569
Query: 1 AQPTPPPAP 9
A PTP PAP
Sbjct: 476 ASPTPHPAP 484
>sp|CAPSD_HEVUS|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 2 QPTPPPAPA 10
+PTP PAP+
Sbjct: 451 RPTPSPAPS 459
>sp|CAPSD_HEVPA|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 QPTPPPAPA 10
+PTP PAP+
Sbjct: 451 RPTPSPAPS 459
>sp|CAPSD_HEVMG|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 2 QPTPPPAPA 10
+PTP PAP+
Sbjct: 451 RPTPSPAPS 459
>sp|CAPSD_HEVMY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 QPTPPPAPA 10
+PTP PAP+
Sbjct: 451 RPTPSPAPS 459
>sp|CAPSD_HEVHY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 QPTPPPAPA 10
+PTP PAP+
Sbjct: 451 RPTPSPAPS 459
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 2 QPTPPPAPA 10
QPT PPA +
Sbjct: 1054 QPTSPPASS 1062
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 AQPTPPPA 8
A P PP A
Sbjct: 1705 ASPEPPSA 1712
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 AQPTPPPAP 9
A PTP PAP
Sbjct: 481 ASPTPRPAP 489
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 2 QPTPPPAPA 10
+PT PAPA
Sbjct: 471 EPTVKPAPA 479
>sp|NP04_HHV2H|NUCLEAR protein UL4|Human herpesvirus 2 (strain HG52)
Query: 2 QPTPPPAP 9
+PT PPAP
Sbjct: 156 RPTTPPAP 163
>sp|NRAM_INBLE|NEURAMINIDASE B virus (strain B/Lee/1940)
Query: 5 PPPAP 9
PPP P
Sbjct: 74 PPPEP 78
>sp|VE4_HPV65|PROTEIN E4|Human papillomavirus 65
Query: 1 AQPTPPPA 8
AQ TPPP+
Sbjct: 5 AQQTPPPS 12
>sp|AN_HCMVM|ALKALINE nuclease|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 AQPTPPPAP 9
A+P PP P
Sbjct: 348 ARPLKPPEP 356
>sp|AN_HCMVA|ALKALINE nuclease|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 AQPTPPPAP 9
A+P PP P
Sbjct: 348 ARPLKPPEP 356
>sp|US17_HCMVM|PROTEIN US17|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 AQPTPPPAPA 10
A PPP P+
Sbjct: 11 AWAPPPPRPS 20
>sp|US17_HCMVA|UNCHARACTERIZED protein HVLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 AQPTPPPAPA 10
A PPP P+
Sbjct: 11 AWAPPPPRPS 20
>sp|PHOSP_ABLVB|PHOSPHOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 QPTPPPAP 9
+P PP AP
Sbjct: 154 KPEPPSAP 161
15|SequenceR|80|71|PEAAPAQPTP
>sp|U23_HHV6Z|PROTEIN U23|Human herpesvirus 6B (strain Z29)
Query: 1 PEAAPAQPTP 10
P+ P + TP
Sbjct: 202 PQGLPTKSTP 211
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 2 EAAPAQPTP 10
+ AP++P P
Sbjct: 288 DTAPSKPIP 296
>sp|NCAP_JUNIN|NUCLEOPROTEIN mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 PEAAPAQP 8
P A P QP
Sbjct: 337 PVAGPRQP 344
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 4 APAQPTP 10
APAQP P
Sbjct: 326 APAQPRP 332
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 4 APAQPTP 10
APAQP P
Sbjct: 326 APAQPRP 332
>sp|MATRX_MEASU|MATRIX protein|Measles virus (strain Hu2) (MeV)
Query: 4 APAQPT 9
AP QPT
Sbjct: 19 APIQPT 24
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 1 PEAAPAQPTP 10
P P QPTP
Sbjct: 22 PWQVPMQPTP 31
>sp|MATRX_MEASE|MATRIX protein|Measles virus (strain Edmonston) (MeV)
Query: 4 APAQPT 9
AP QPT
Sbjct: 19 APIQPT 24
>sp|MATRX_MEASC|MATRIX protein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 4 APAQPT 9
AP QPT
Sbjct: 19 APIQPT 24
>sp|MATRX_MEASA|MATRIX protein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 4 APAQPT 9
AP QPT
Sbjct: 19 APIQPT 24
16|SequenceR|85|76|LDVQLPEAAP
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 LDVQLP 6
LDVQLP
Sbjct: 1738 LDVQLP 1743
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 2 DVQLPEA 8
DV+LP+A
Sbjct: 139 DVELPKA 145
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 LDVQLPE 7
LD+ LPE
Sbjct: 1549 LDIGLPE 1555
>sp|VP3_ROTHD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/DS-1/1976/G2P1B[4])
Query: 1 LDVQLPEAA 9
+DV+LP +A
Sbjct: 387 MDVELPISA 395
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 LDVQLPE 7
LD+ LPE
Sbjct: 1549 LDIGLPE 1555
>sp|CVC1_HCMVM|CAPSID vertex component 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 DVQLPEAA 9
D +LPEAA
Sbjct: 205 DRRLPEAA 212
>sp|CVC1_HCMVA|CAPSID vertex component 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 DVQLPEAA 9
D +LPEAA
Sbjct: 205 DRRLPEAA 212
>sp|VIRF2_HHV8P|VIRAL IRF2-like protein|Human herpesvirus 8 type P
Query: 4 QLPEAAP 10
Q+PEA+P
Sbjct: 542 QVPEASP 548
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 4 QLPEAAP 10
+LPEA P
Sbjct: 125 ELPEAGP 131
17|SequenceR|90|81|ALVPLLDVQL
>sp|PORTL_HCMVM|PORTAL protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ALVPLLDVQ 9
LVPLLDV+
Sbjct: 182 GLVPLLDVK 190
>sp|PORTL_HCMVA|PORTAL protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ALVPLLDVQ 9
LVPLLDV+
Sbjct: 182 GLVPLLDVK 190
>sp|VE6_HPV66|PROTEIN E6|Human papillomavirus 66
Query: 3 VPLLDVQL 10
+PLLD++L
Sbjct: 24 IPLLDLRL 31
>sp|US03_HHV11|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 1 (strain 17)
Query: 1 ALVPLLDVQL 10
A++PLLD+ +
Sbjct: 241 AILPLLDLHV 250
>sp|US03_HHV2H|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 2 (strain HG52)
Query: 1 ALVPLLDVQL 10
A++PLLD+ +
Sbjct: 241 AILPLLDLHV 250
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 2 LVPLLDVQL 10
L+ +LDVQL
Sbjct: 252 LMSILDVQL 260
>sp|VL2_HPV41|MINOR capsid protein L2|Human papillomavirus type 41
Query: 2 LVPLLDV 8
L+PLLD+
Sbjct: 236 LIPLLDI 242
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 4 PLLDVQ 9
PLLD+Q
Sbjct: 745 PLLDMQ 750
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 4 PLLDVQ 9
PLLD+Q
Sbjct: 745 PLLDMQ 750
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 LVPLLD 7
LVP+LD
Sbjct: 1018 LVPILD 1023
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 LVPLLD 7
LVP+LD
Sbjct: 1018 LVPILD 1023
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 LVPLLD 7
LVP+LD
Sbjct: 1018 LVPILD 1023
>sp|VP7_ROTAM|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 2 LVPLLDVQ 9
L PLLD Q
Sbjct: 44 LSPLLDAQ 51
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 ALVPLLD 7
+LVP+LD
Sbjct: 1019 SLVPVLD 1025
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 ALVPLLD 7
+L+PL+D
Sbjct: 136 SLIPLID 142
>sp|ORF1_VZVO|STRUCTURAL protein 1|Varicella-zoster virus (strain Oka vaccine)
Query: 2 LVPLLDV 8
L+PL+DV
Sbjct: 49 LIPLVDV 55
>sp|ORF1_VZVD|STRUCTURAL protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 LVPLLDV 8
L+PL+DV
Sbjct: 49 LIPLVDV 55
18|SequenceR|95|86|SEQAAALVPL
>sp|NRAM_I97A1|NEURAMINIDASE A virus (strain A/Hong
Query: 1 SEQAAALVPL 10
+EQAAA V L
Sbjct: 57 TEQAAASVTL 66
>sp|NRAM_I97A0|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 1 SEQAAALVPL 10
+EQAAA V L
Sbjct: 57 TEQAAASVTL 66
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 EQAAALVP 9
E+A ALVP
Sbjct: 2516 EEACALVP 2523
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 EQAAALVP 9
E+A ALVP
Sbjct: 2516 EEACALVP 2523
19|SequenceR|100|91|AAAAASEQAA
***** No hits found ******
20|SequenceR|105|96|AAAAAAAAAA
***** No hits found ******
21|SequenceR|110|101|AVAAAAAAAA
***** No hits found ******
22|SequenceR|115|106|APPAAAVAAA
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 APPAAAVA 8
APP A+A
Sbjct: 1423 APPPPAIA 1430
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 APPAAAVAA 9
+PP+A VAA
Sbjct: 676 SPPSATVAA 684
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 APPAAAVAA 9
+PP+A VAA
Sbjct: 673 SPPSATVAA 681
23|SequenceR|120|111|SAAAPAPPAA
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 SAAAPAPPAA 10
+A P PPAA
Sbjct: 436 NATTPVPPAA 445
Query: 5 PAPPA 9
PAPPA
Sbjct: 28 PAPPA 32
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 SAAAPAPPAA 10
+A P PPAA
Sbjct: 436 NATTPVPPAA 445
Query: 5 PAPPA 9
PAPPA
Sbjct: 28 PAPPA 32
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 AAAPAPPAA 10
A+P PP+A
Sbjct: 1704 GASPEPPSA 1712
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 AAAPAPPAA 10
A+P PP+A
Sbjct: 1704 GASPEPPSA 1712
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 AAAPAPPAA 10
A+P PP+A
Sbjct: 1704 GASPEPPSA 1712
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 AAAPAPPAA 10
A+P PP+A
Sbjct: 1704 GASPEPPSA 1712
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 AAAPAPPAA 10
A+P PP+A
Sbjct: 1704 GASPEPPSA 1712
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 2 AAAPAPPAA 10
A+P PP+A
Sbjct: 1693 GASPDPPSA 1701
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 SAAAPAPP 8
S AAP PP
Sbjct: 2093 SGAAPTPP 2100
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 1 SAAAPAPP 8
S AAP PP
Sbjct: 2092 SGAAPTPP 2099
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 SAAAPAPP 8
S AAP PP
Sbjct: 2092 SGAAPTPP 2099
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 AAAPAPPAA 10
++P PP+A
Sbjct: 1704 GSSPEPPSA 1712
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 AAAPAPPAA 10
++P PP+A
Sbjct: 1704 GSSPEPPSA 1712
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SAAAPAPPAA 10
+A P PP A
Sbjct: 436 NATTPVPPTA 445
Query: 5 PAPPA 9
PAPPA
Sbjct: 28 PAPPA 32
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 SAAAPAPP 8
+ A P+PP
Sbjct: 119 TTATPSPP 126
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 SAAAPAPPAA 10
S P PP+A
Sbjct: 1737 SGTRPLPPSA 1746
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 SAAAPAPPAA 10
S P PP+A
Sbjct: 1737 SGTHPLPPSA 1746
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 SAAAPAPPAA 10
S P PP+A
Sbjct: 1737 SGTHPLPPSA 1746
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 SAAAPAPPAA 10
S P PP+A
Sbjct: 1737 SGTHPLPPSA 1746
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 SAAAPAPPAA 10
S P PP+A
Sbjct: 1737 SGTHPLPPSA 1746
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 SAAAPAPPAA 10
S P PP+A
Sbjct: 1737 SGTHPLPPSA 1746
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 SAAAPAPPAA 10
S P PP+A
Sbjct: 1737 SGTHPLPPSA 1746
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 SAAAPAPPAA 10
S P PP+A
Sbjct: 1737 SGTHPLPPSA 1746
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 1 SAAAPAPPAA 10
S P PP+A
Sbjct: 1738 SGTHPLPPSA 1747
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 SAAAPAPPAA 10
S P PP+A
Sbjct: 1737 SGTHPLPPSA 1746
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 1 SAAAPAPPAA 10
S P PP+A
Sbjct: 1737 SGTHPLPPSA 1746
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 SAAAPAPPAA 10
S P PP+A
Sbjct: 1738 SGTHPLPPSA 1747
>sp|PHOSP_RABVR|PHOSPHOPROTEIN virus (strain China/MRV) (RABV)
Query: 1 SAAAPAPPA 9
+ AP PPA
Sbjct: 175 AQVAPGPPA 183
>sp|PHOSP_RABVC|PHOSPHOPROTEIN virus (strain CVS-11) (RABV)
Query: 1 SAAAPAPPA 9
+ AP PPA
Sbjct: 175 AQVAPGPPA 183
>sp|PHOSP_RABVA|PHOSPHOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 1 SAAAPAPPA 9
+ AP PPA
Sbjct: 175 AQVAPGPPA 183
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 4 APAPPAA 10
AP PPA
Sbjct: 2872 APEPPAG 2878
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 4 APAPPAA 10
AP PPA
Sbjct: 2885 APEPPAG 2891
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 AAPAPPA 9
A PAPP
Sbjct: 216 AGPAPPG 222
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 4 APAPPAA 10
AP PPA
Sbjct: 2892 APEPPAG 2898
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 4 APAPPAA 10
AP PPA
Sbjct: 2892 APEPPAG 2898
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 APAPPAA 10
AP PPA
Sbjct: 2892 APEPPAG 2898
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 4 APAPPAA 10
AP PPA
Sbjct: 2892 APEPPAG 2898
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 AAAPAPP 8
AA+P PP
Sbjct: 528 AASPLPP 534
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 AAAPAPP 8
AA+P PP
Sbjct: 528 AASPLPP 534
24|SequenceR|125|116|ATDVTSAAAP
***** No hits found ******
25|SequenceR|130|121|PQKLAATDVT
>sp|ORF50_HHV8P|REPLICATION and transcription activator|Human herpesvirus 8 type P
Query: 1 PQKLAATDV 9
PQ + ATDV
Sbjct: 556 PQDVHATDV 564
>sp|NS2_HRSVA|NON-STRUCTURAL protein 2|Human respiratory syncytial virus A
Query: 1 PQKLAATDV 9
PQ+L TD+
Sbjct: 10 PQRLMITDM 18
>sp|NS2_HRSV|NON-STRUCTURAL protein 2|Human respiratory syncytial virus
Query: 1 PQKLAATDV 9
PQ+L TD+
Sbjct: 10 PQRLMITDM 18
26|SequenceR|135|126|PPPAPPQKLA
>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P
Query: 1 PPPAPP 6
PPP PP
Sbjct: 386 PPPLPP 391
>sp|NS1_I85A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 2 PPAPPQK 8
PP PP++
Sbjct: 212 PPLPPKQ 218
>sp|NS1_I78A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Mallard/New
Query: 2 PPAPPQK 8
PP PP++
Sbjct: 212 PPLPPKQ 218
>sp|NS1_I80A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 2 PPAPPQK 8
PP PP++
Sbjct: 212 PPLPPKQ 218
>sp|NS1_I59A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 2 PPAPPQK 8
PP PP++
Sbjct: 212 PPLPPKQ 218
>sp|NS1_I78A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Mallard/New
Query: 2 PPAPPQK 8
PP PP++
Sbjct: 212 PPLPPKQ 218
>sp|NS1_I18A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Brevig
Query: 2 PPAPPQK 8
PP PP++
Sbjct: 212 PPLPPKQ 218
>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)
Query: 1 PPPAPP 6
PP APP
Sbjct: 66 PPTAPP 71
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 PPAPP 6
PP PP
Sbjct: 2864 PPPPP 2868
>sp|CEP1_HCMVM|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PPPAPPQ 7
PP PP+
Sbjct: 236 PPKLPPR 242
>sp|CEP1_HCMVA|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PPPAPPQ 7
PP PP+
Sbjct: 236 PPKLPPR 242
>sp|NS1_I82A8|NON-STRUCTURAL protein 1|Influenza A virus (strain
Query: 2 PPAPPQK 8
PP PP++
Sbjct: 212 PPLPPKQ 218
>sp|NS1_I24A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Japan/1924
Query: 2 PPAPPQK 8
PP PP++
Sbjct: 209 PPLPPKQ 215
>sp|NS1_I78A8|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/18/1978
Query: 1 PPPAPPQK 8
PP P QK
Sbjct: 212 PPLTPKQK 219
>sp|NS1_I78A7|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/2/1978
Query: 1 PPPAPPQK 8
PP P QK
Sbjct: 212 PPLTPKQK 219
>sp|NS1_I77A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Alaska/6/1977
Query: 1 PPPAPPQK 8
PP P QK
Sbjct: 212 PPLTPKQK 219
>sp|NS1_I01A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Silky
Query: 2 PPAPPQK 8
PP PP +
Sbjct: 207 PPLPPNQ 213
>sp|NS1_I96A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 PPPAPPQK 8
PP P QK
Sbjct: 212 PPLTPTQK 219
>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)
Query: 2 PPAPP 6
PPAPP
Sbjct: 598 PPAPP 602
>sp|NS1_I01A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 2 PPAPPQK 8
PP PP +
Sbjct: 207 PPLPPNQ 213
>sp|NS1_I00A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Duck/Hong
Query: 2 PPAPPQK 8
PP PP +
Sbjct: 207 PPLPPNQ 213
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 PPAPP 6
PP PP
Sbjct: 183 PPTPP 187
>sp|NS1_I76A6|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/110/1976
Query: 1 PPPAPPQK 8
PP P QK
Sbjct: 212 PPLTPKQK 219
>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)
Query: 2 PPAPPQKLA 10
PP+PP LA
Sbjct: 648 PPSPPAPLA 656
>sp|NS1_I77A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 PPPAPPQK 8
PP P QK
Sbjct: 212 PPLTPKQK 219
>sp|NS1_I01A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 2 PPAPPQK 8
PP PP +
Sbjct: 207 PPLPPNQ 213
>sp|GO_HHV6U|120 kDa Glycoprotein O|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PPPAPP 6
P PAPP
Sbjct: 292 PTPAPP 297
>sp|NS1_I75A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Beijing/39/1975
Query: 1 PPPAPPQK 8
PP P QK
Sbjct: 212 PPLTPKQK 219
>sp|NS1_I73A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Port
Query: 1 PPPAPPQK 8
PP P QK
Sbjct: 212 PPLTPKQK 219
>sp|NS1_I72A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Udorn/307/1972
Query: 1 PPPAPPQK 8
PP P QK
Sbjct: 212 PPLTPKQK 219
>sp|NS1_I68A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong
Query: 1 PPPAPPQK 8
PP P QK
Sbjct: 212 PPLTPKQK 219
>sp|NS1_I01A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 2 PPAPPQK 8
PP PP +
Sbjct: 207 PPLPPNQ 213
>sp|NS1_I80A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/4/1980
Query: 1 PPPAPPQK 8
PP P QK
Sbjct: 212 PPLTPKQK 219
>sp|NS1_I68A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Korea/426/1968
Query: 1 PPPAPPQK 8
PP P QK
Sbjct: 212 PPLTPKQK 219
>sp|NS1_I68A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Aichi/2/1968
Query: 1 PPPAPPQK 8
PP P QK
Sbjct: 212 PPLTPKQK 219
>sp|NS1_I83A8|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong
Query: 1 PPPAPPQK 8
PP P QK
Sbjct: 212 PPLTPKQK 219
>sp|NS1_I70A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Qu/7/1970
Query: 1 PPPAPPQK 8
PP P QK
Sbjct: 212 PPLTPKQK 219
>sp|NS1_I89A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Beijing/352/1989
Query: 1 PPPAPPQK 8
PP P QK
Sbjct: 212 PPLTPKQK 219
>sp|NS1_I71A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/1/1971
Query: 1 PPPAPPQK 8
PP P QK
Sbjct: 212 PPLTPKQK 219
>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)
Query: 2 PPAPPQKLA 10
PP+PP LA
Sbjct: 649 PPSPPAPLA 657
>sp|NS1_I72A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/101/1972
Query: 1 PPPAPPQK 8
PP P QK
Sbjct: 212 PPLTPKQK 219
>sp|NS1_I72A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/102/1972
Query: 1 PPPAPPQK 8
PP P QK
Sbjct: 212 PPLTPKQK 219
>sp|NS1_I45A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 1 PPPAPPQK 8
PP P QK
Sbjct: 212 PPLTPKQK 219
>sp|NS1_I02A7|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 2 PPAPPQK 8
PP PP +
Sbjct: 190 PPLPPNQ 196
>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37
Query: 2 PPAPP 6
PP PP
Sbjct: 14 PPTPP 18
>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15
Query: 2 PPAPP 6
PP PP
Sbjct: 14 PPTPP 18
>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38
Query: 2 PPAPP 6
PP PP
Sbjct: 14 PPTPP 18
>sp|NS1_I40A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hickox/1940
Query: 1 PPPAPPQK 8
PP P QK
Sbjct: 212 PPLTPKQK 219
>sp|VL1_HPV22|MAJOR capsid protein L1|Human papillomavirus 22
Query: 2 PPAPP 6
PP PP
Sbjct: 14 PPTPP 18
>sp|NS1_I77AB|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USSR/90/1977
Query: 1 PPPAPPQK 8
PP P QK
Sbjct: 212 PPLTPKQK 219
>sp|NS1_I77AA|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Brazil/11/1978
Query: 1 PPPAPPQK 8
PP P QK
Sbjct: 212 PPLTPKQK 219
>sp|NS1_I54A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 PPPAPPQK 8
PP P QK
Sbjct: 212 PPLTPKQK 219
>sp|NS1_I51A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 PPPAPPQK 8
PP P QK
Sbjct: 212 PPLTPKQK 219
>sp|NS1_I83A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chile/1/1983
Query: 1 PPPAPPQK 8
PP P QK
Sbjct: 212 PPLTPKQK 219
>sp|NS1_I80AA|NON-STRUCTURAL protein 1|Influenza A virus (strain A/India/6263/1980
Query: 1 PPPAPPQK 8
PP P QK
Sbjct: 212 PPLTPKQK 219
>sp|NS1_I50A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Fort
Query: 1 PPPAPPQK 8
PP P QK
Sbjct: 212 PPLTPKQK 219
>sp|NS1_I36A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Henry/1936
Query: 1 PPPAPPQK 8
PP P QK
Sbjct: 212 PPLTPKQK 219
>sp|NS1_I35A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Phila/1935
Query: 1 PPPAPPQK 8
PP P QK
Sbjct: 212 PPLTPKQK 219
>sp|NS1_I33A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 PPPAPPQK 8
PP P QK
Sbjct: 212 PPLTPKQK 219
>sp|NS1_I57A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Japan/305/1957
Query: 1 PPPAPPQK 8
PP P QK
Sbjct: 212 PPLTPKQK 219
>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17
Query: 2 PPAPP 6
PP PP
Sbjct: 14 PPTPP 18
>sp|NS1_I54A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/1/1954
Query: 1 PPPAPPQK 8
PP P QK
Sbjct: 212 PPLTPKQK 219
>sp|NS1_I34A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Puerto
Query: 1 PPPAPPQK 8
PP P QK
Sbjct: 212 PPLTPKQK 219
>sp|NS1_I06A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 PPPAPPQK 8
PP P QK
Sbjct: 212 PPLTPKQK 219
>sp|NS1_I000X|NON-STRUCTURAL protein 1|Influenza A virus (strain A/X-31
Query: 1 PPPAPPQK 8
PP P QK
Sbjct: 212 PPLTPKQK 219
27|SequenceR|140|131|VPPPPPPPAP
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 1 VPPPPPPPAP 10
V PPP P P
Sbjct: 1222 VTPPPKPETP 1231
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 4 PPPPPA 9
PPPPP
Sbjct: 2864 PPPPPG 2869
Query: 2 PPPPP 6
PPPPP
Sbjct: 2864 PPPPP 2868
Query: 3 PPPPP 7
PPPPP
Sbjct: 2864 PPPPP 2868
Query: 6 PPPAP 10
PPP P
Sbjct: 2864 PPPPP 2868
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 PPPPPPPA 9
P PPPPA
Sbjct: 1461 PETPPPPA 1468
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 PPPPPPPA 9
P PPPPA
Sbjct: 1451 PETPPPPA 1458
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 PPPPPPPA 9
P PPPPA
Sbjct: 1441 PETPPPPA 1448
>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P
Query: 1 VPPPPPPP 8
+ PPP PP
Sbjct: 384 ISPPPLPP 391
Query: 6 PPPAP 10
PPP P
Sbjct: 386 PPPLP 390
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 PPPPPPPA 9
P PPPPA
Sbjct: 1442 PETPPPPA 1449
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 2 PPPPPPPA 9
P PPPPA
Sbjct: 1453 PETPPPPA 1460
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 PPPPPPPA 9
P PPPPA
Sbjct: 1445 PETPPPPA 1452
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 2 PPPPPPPA 9
P PPPPA
Sbjct: 1452 PETPPPPA 1459
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 2 PPPPPPPA 9
P PPPPA
Sbjct: 1442 PETPPPPA 1449
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 2 PPPPPPPA 9
P PPPPA
Sbjct: 1440 PETPPPPA 1447
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 2 PPPPPPPA 9
P PPPPA
Sbjct: 1451 PETPPPPA 1458
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 5 PPPPAP 10
PPPP+P
Sbjct: 626 PPPPSP 631
Query: 1 VPPPPPP 7
+PPPP P
Sbjct: 625 LPPPPSP 631
Query: 3 PPPPPP 8
PPPP P
Sbjct: 626 PPPPSP 631
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 2 PPPPPPPA 9
P PPPPA
Sbjct: 1454 PETPPPPA 1461
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 2 PPPPPPPA 9
P PPPPA
Sbjct: 1443 PETPPPPA 1450
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 2 PPPPPPPA 9
P PPPPA
Sbjct: 1443 PDTPPPPA 1450
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 PPPPPPPA 9
P PP PP+
Sbjct: 1950 PVPPNPPS 1957
Query: 1 VPPPPP 6
VPP PP
Sbjct: 1951 VPPNPP 1956
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 PPPPPPPA 9
P PP PP+
Sbjct: 1950 PMPPNPPS 1957
Query: 1 VPPPPP 6
+PP PP
Sbjct: 1951 MPPNPP 1956
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 PPPPPPPA 9
P PP PP+
Sbjct: 1950 PIPPNPPS 1957
Query: 1 VPPPPP 6
+PP PP
Sbjct: 1951 IPPNPP 1956
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 PPPPPPPA 9
P PP PP+
Sbjct: 1950 PIPPNPPS 1957
Query: 1 VPPPPP 6
+PP PP
Sbjct: 1951 IPPNPP 1956
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 VPPPPP 6
VP PPP
Sbjct: 1482 VPSPPP 1487
Query: 3 PPPPP 7
P PPP
Sbjct: 1483 PSPPP 1487
Query: 4 PPPPP 8
P PPP
Sbjct: 1483 PSPPP 1487
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 VPPPPP 6
VP PPP
Sbjct: 1482 VPSPPP 1487
Query: 3 PPPPP 7
P PPP
Sbjct: 1483 PSPPP 1487
Query: 4 PPPPP 8
P PPP
Sbjct: 1483 PSPPP 1487
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 VPPPPP 6
VP PPP
Sbjct: 1482 VPSPPP 1487
Query: 3 PPPPP 7
P PPP
Sbjct: 1483 PSPPP 1487
Query: 4 PPPPP 8
P PPP
Sbjct: 1483 PSPPP 1487
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 1 VPPPPP 6
+PPPPP
Sbjct: 68 IPPPPP 73
Query: 3 PPPPP 7
PPPPP
Sbjct: 69 PPPPP 73
Query: 4 PPPPP 8
PPPPP
Sbjct: 69 PPPPP 73
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 VPPPPP 6
VP PPP
Sbjct: 1482 VPSPPP 1487
Query: 3 PPPPP 7
P PPP
Sbjct: 1483 PSPPP 1487
Query: 4 PPPPP 8
P PPP
Sbjct: 1483 PSPPP 1487
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 VPPPPP 6
VP PPP
Sbjct: 1482 VPSPPP 1487
Query: 3 PPPPP 7
P PPP
Sbjct: 1483 PSPPP 1487
Query: 4 PPPPP 8
P PPP
Sbjct: 1483 PSPPP 1487
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 VPPPPP 6
VP PPP
Sbjct: 1482 VPSPPP 1487
Query: 3 PPPPP 7
P PPP
Sbjct: 1483 PSPPP 1487
Query: 4 PPPPP 8
P PPP
Sbjct: 1483 PSPPP 1487
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 VPPPPP 6
VP PPP
Sbjct: 1482 VPSPPP 1487
Query: 3 PPPPP 7
P PPP
Sbjct: 1483 PSPPP 1487
Query: 4 PPPPP 8
P PPP
Sbjct: 1483 PSPPP 1487
>sp|V_MEASY|NON-STRUCTURAL protein V|Measles virus (strain Yamagata-1) (MeV)
Query: 1 VPPPPPP 7
VPPPP P
Sbjct: 212 VPPPPDP 218
Query: 3 PPPPPPA 9
PPPP P
Sbjct: 213 PPPPDPG 219
Query: 5 PPPPAP 10
PPPP P
Sbjct: 213 PPPPDP 218
>sp|US17_HCMVM|PROTEIN US17|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PPPPPPA 9
PPPP P+
Sbjct: 14 PPPPRPS 20
Query: 5 PPPPAP 10
PPPP P
Sbjct: 14 PPPPRP 19
Query: 2 PPPPPP 7
PPPP P
Sbjct: 14 PPPPRP 19
>sp|US17_HCMVA|UNCHARACTERIZED protein HVLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PPPPPPA 9
PPPP P+
Sbjct: 14 PPPPRPS 20
Query: 5 PPPPAP 10
PPPP P
Sbjct: 14 PPPPRP 19
Query: 2 PPPPPP 7
PPPP P
Sbjct: 14 PPPPRP 19
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 PPPPPPPA 9
P PP PP+
Sbjct: 1950 PIPPNPPS 1957
Query: 1 VPPPPP 6
+PP PP
Sbjct: 1951 IPPNPP 1956
>sp|V_MEASC|NON-STRUCTURAL protein V|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 VPPPPPP 7
VPPPP P
Sbjct: 212 VPPPPNP 218
Query: 3 PPPPPPA 9
PPPP P+
Sbjct: 213 PPPPNPS 219
Query: 5 PPPPAP 10
PPPP P
Sbjct: 213 PPPPNP 218
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 VPPPPP 6
VP PPP
Sbjct: 1072 VPSPPP 1077
Query: 3 PPPPP 7
P PPP
Sbjct: 1073 PSPPP 1077
Query: 4 PPPPP 8
P PPP
Sbjct: 1073 PSPPP 1077
>sp|PHOSP_MEASY|PHOSPHOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 1 VPPPPPP 7
VPPPP P
Sbjct: 212 VPPPPDP 218
Query: 3 PPPPPPA 9
PPPP P
Sbjct: 213 PPPPDPG 219
Query: 5 PPPPAP 10
PPPP P
Sbjct: 213 PPPPDP 218
>sp|V_MEASI|NON-STRUCTURAL protein V|Measles virus (strain IP-3-Ca) (MeV)
Query: 1 VPPPPPP 7
VPPPP P
Sbjct: 212 VPPPPDP 218
Query: 3 PPPPPPA 9
PPPP P
Sbjct: 213 PPPPDPG 219
Query: 5 PPPPAP 10
PPPP P
Sbjct: 213 PPPPDP 218
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 4 PPPPPAP 10
PPP P+P
Sbjct: 50 PPPVPSP 56
Query: 2 PPPPPPP 8
PPP P P
Sbjct: 50 PPPVPSP 56
Query: 2 PPPPPPPAP 10
P PPP P
Sbjct: 46 PASRPPPVP 54
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 4 PPPPPAP 10
PPP P+P
Sbjct: 50 PPPVPSP 56
Query: 2 PPPPPPP 8
PPP P P
Sbjct: 50 PPPVPSP 56
Query: 2 PPPPPPPAP 10
P PPP P
Sbjct: 46 PASRPPPVP 54
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 2 PPPPPPP 8
P PPPP
Sbjct: 1459 PETPPPP 1465
Query: 1 VPPPPPPPA 9
VPP P PA
Sbjct: 715 VPPGGPIPA 723
>sp|GO_HHV6U|120 kDa Glycoprotein O|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 VPPPPPPP 8
+P P PPP
Sbjct: 291 IPTPAPPP 298
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 2 PPPPPPP 8
P PPPP
Sbjct: 1443 PETPPPP 1449
>sp|PHOSP_MEASC|PHOSPHOPROTEIN virus (strain Ichinose-B95a) (MeV)
Query: 1 VPPPPPP 7
VPPPP P
Sbjct: 212 VPPPPNP 218
Query: 3 PPPPPPA 9
PPPP P+
Sbjct: 213 PPPPNPS 219
Query: 5 PPPPAP 10
PPPP P
Sbjct: 213 PPPPNP 218
>sp|GO_HHV6G|120 kDa Glycoprotein O|Human herpesvirus 6A (strain GS)
Query: 1 VPPPPPPP 8
+P P PPP
Sbjct: 291 IPTPEPPP 298
>sp|PHOSP_MEASI|PHOSPHOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 1 VPPPPPP 7
VPPPP P
Sbjct: 212 VPPPPDP 218
Query: 3 PPPPPPA 9
PPPP P
Sbjct: 213 PPPPDPG 219
Query: 5 PPPPAP 10
PPPP P
Sbjct: 213 PPPPDP 218
>sp|PG097_VARV|PROTEIN OPG097|Variola virus
Query: 2 PPPPP 6
P PPP
Sbjct: 49 PSPPP 53
Query: 3 PPPPP 7
P PPP
Sbjct: 49 PSPPP 53
Query: 4 PPPPP 8
P PPP
Sbjct: 49 PSPPP 53
>sp|PG097_VAR67|PROTEIN OPG097|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 PPPPP 6
P PPP
Sbjct: 49 PSPPP 53
Query: 3 PPPPP 7
P PPP
Sbjct: 49 PSPPP 53
Query: 4 PPPPP 8
P PPP
Sbjct: 49 PSPPP 53
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 4 PPPPPA 9
PP PPA
Sbjct: 183 PPTPPA 188
Query: 2 PPPPPPPA 9
PP PP A
Sbjct: 183 PPTPPATA 190
>sp|V_MEASW|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-Schwarz vaccine)
Query: 1 VPPPPPP 7
VPPPP P
Sbjct: 212 VPPPPDP 218
Query: 3 PPPPPPA 9
PPPP P
Sbjct: 213 PPPPDPG 219
Query: 5 PPPPAP 10
PPPP P
Sbjct: 213 PPPPDP 218
>sp|V_MEASE|NON-STRUCTURAL protein V|Measles virus (strain Edmonston) (MeV)
Query: 1 VPPPPPP 7
VPPPP P
Sbjct: 212 VPPPPDP 218
Query: 3 PPPPPPA 9
PPPP P
Sbjct: 213 PPPPDPG 219
Query: 5 PPPPAP 10
PPPP P
Sbjct: 213 PPPPDP 218
>sp|V_MEASA|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 VPPPPPP 7
VPPPP P
Sbjct: 212 VPPPPDP 218
Query: 3 PPPPPPA 9
PPPP P
Sbjct: 213 PPPPDPG 219
Query: 5 PPPPAP 10
PPPP P
Sbjct: 213 PPPPDP 218
>sp|PHOSP_MEASM|PHOSPHOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 1 VPPPPPP 7
VPPPP P
Sbjct: 212 VPPPPDP 218
Query: 3 PPPPPPA 9
PPPP P
Sbjct: 213 PPPPDPG 219
Query: 5 PPPPAP 10
PPPP P
Sbjct: 213 PPPPDP 218
>sp|PHOSP_MEASE|PHOSPHOPROTEIN virus (strain Edmonston) (MeV)
Query: 1 VPPPPPP 7
VPPPP P
Sbjct: 212 VPPPPDP 218
Query: 3 PPPPPPA 9
PPPP P
Sbjct: 213 PPPPDPG 219
Query: 5 PPPPAP 10
PPPP P
Sbjct: 213 PPPPDP 218
>sp|PHOSP_MEASF|PHOSPHOPROTEIN virus (strain Edmonston B)
Query: 1 VPPPPPP 7
VPPPP P
Sbjct: 212 VPPPPDP 218
Query: 3 PPPPPPA 9
PPPP P
Sbjct: 213 PPPPDPG 219
Query: 5 PPPPAP 10
PPPP P
Sbjct: 213 PPPPDP 218
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 3 PPPPPPAP 10
P PP P P
Sbjct: 622 PRPPSPTP 629
Query: 3 PPPPPPA 9
PP P PA
Sbjct: 624 PPSPTPA 630
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 5 PPPPA 9
PPPPA
Sbjct: 1417 PPPPA 1421
Query: 1 VPPPPPPPA 9
+PP PP A
Sbjct: 528 IPPQTPPTA 536
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 5 PPPPA 9
PPPPA
Sbjct: 1424 PPPPA 1428
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 5 PPPPA 9
PPPPA
Sbjct: 1420 PPPPA 1424
>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)
Query: 4 PPPPPAP 10
PP PPAP
Sbjct: 648 PPSPPAP 654
Query: 1 VPPPPPPP 8
VPP PP P
Sbjct: 647 VPPSPPAP 654
>sp|VIF_HV196|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 PPPPPPPAP 10
P P PP P
Sbjct: 156 PRRPKPPVP 164
>sp|PHOSP_MEASA|PHOSPHOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 1 VPPPPPP 7
VPPPP P
Sbjct: 212 VPPPPDP 218
Query: 3 PPPPPPA 9
PPPP P
Sbjct: 213 PPPPDPG 219
>sp|VP30_MABVR|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 PPPPP 6
PPPPP
Sbjct: 70 PPPPP 74
Query: 3 PPPPP 7
PPPPP
Sbjct: 70 PPPPP 74
Query: 4 PPPPP 8
PPPPP
Sbjct: 70 PPPPP 74
>sp|GM_HHV8P|ENVELOPE glycoprotein M|Human herpesvirus 8 type P
Query: 4 PPPPPA 9
PPP PA
Sbjct: 357 PPPLPA 362
Query: 6 PPPAP 10
PPP P
Sbjct: 357 PPPLP 361
>sp|NEC2_HCMVA|NUCLEAR egress protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PPPPPPAP 10
PP PP AP
Sbjct: 322 PPSPPCAP 329
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 5 PPPPA 9
PPPPA
Sbjct: 1431 PPPPA 1435
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 3 PPPPPPAP 10
PP P P P
Sbjct: 296 PPGPDPGP 303
>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)
Query: 4 PPPPPAP 10
PP PPAP
Sbjct: 649 PPSPPAP 655
Query: 1 VPPPPPPP 8
VPP PP P
Sbjct: 648 VPPSPPAP 655
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PPPPPPAP 10
PP P P P
Sbjct: 296 PPGPDPGP 303
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 2 PPPPPPPA 9
P P P PA
Sbjct: 751 PLPAPKPA 758
>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57
Query: 1 VPPPP 5
VPPPP
Sbjct: 417 VPPPP 421
Query: 4 PPPPPA 9
PPPP A
Sbjct: 418 PPPPSA 423
>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 VPPPPPPPAP 10
+PPP P P
Sbjct: 231 IPPPLPTARP 240
>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PPPPPAP 10
PP PAP
Sbjct: 25 PPTSPAP 31
>sp|UL88_HCMVM|PROTEIN UL88|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PPPPPA 9
PPPP A
Sbjct: 53 PPPPDA 58
>sp|UL88_HCMVA|PROTEIN UL88|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PPPPPA 9
PPPP A
Sbjct: 53 PPPPDA 58
>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin)
Query: 4 PPPPPAP 10
PP PAP
Sbjct: 25 PPTSPAP 31
>sp|NRAM_INBLE|NEURAMINIDASE B virus (strain B/Lee/1940)
Query: 2 PPPPP 6
PPP P
Sbjct: 74 PPPEP 78
>sp|VGP_MABVO|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 PPPPPPAP 10
PP P P P
Sbjct: 295 PPTPSPQP 302
>sp|VSSGP_EBOSU|SUPER small secreted glycoprotein|Sudan ebolavirus (strain
Query: 1 VPPPP 5
+PPPP
Sbjct: 122 LPPPP 126
>sp|VP30_MABVO|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 PPPPP 6
PPPPP
Sbjct: 70 PPPPP 74
Query: 3 PPPPP 7
PPPPP
Sbjct: 70 PPPPP 74
Query: 4 PPPPP 8
PPPPP
Sbjct: 70 PPPPP 74
>sp|PKG3_ADE05|PACKAGING protein 3|Human adenovirus C serotype 5
Query: 3 PPPPPPA 9
P PPP A
Sbjct: 27 PSPPPTA 33
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VPPPPPP 7
VP PP P
Sbjct: 142 VPLPPDP 148
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 1 VPPPP 5
VPPPP
Sbjct: 511 VPPPP 515
>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37
Query: 3 PPPPPPA 9
PP PP A
Sbjct: 14 PPTPPVA 20
28|SequenceR|145|136|AAPASVPPPP
>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 PASVPPP 9
P +VPPP
Sbjct: 152 PTTVPPP 158
>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PASVPPP 9
P +VPPP
Sbjct: 152 PTTVPPP 158
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PASVPPP 9
P +VPPP
Sbjct: 153 PTTVPPP 159
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 3 PASVPP 8
PA++PP
Sbjct: 1905 PAAIPP 1910
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 3 PASVPP 8
PA++PP
Sbjct: 1906 PAAIPP 1911
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 3 PASVPP 8
PA++PP
Sbjct: 1905 PAAIPP 1910
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 3 PASVPP 8
PA++PP
Sbjct: 1905 PAAIPP 1910
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 3 PASVPP 8
PA++PP
Sbjct: 1905 PAAIPP 1910
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 3 PASVPP 8
PA++PP
Sbjct: 1905 PAAIPP 1910
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 3 PASVPP 8
PA++PP
Sbjct: 1905 PAAIPP 1910
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 3 PASVPP 8
PA++PP
Sbjct: 1906 PAAIPP 1911
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 3 PASVPP 8
PA++PP
Sbjct: 1906 PAAIPP 1911
>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 APASVPPP 9
AP+ +PPP
Sbjct: 227 APSKIPPP 234
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 1 AAPASVPPP 9
PAS PPP
Sbjct: 44 GGPASRPPP 52
>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P
Query: 4 ASVPPPP 10
AS+PP P
Sbjct: 555 ASLPPSP 561
>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23
Query: 3 PASVPPP 9
PAS P P
Sbjct: 138 PASAPGP 144
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 APASVPPP 9
AP + PPP
Sbjct: 1460 APETPPPP 1467
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 APASVPPP 9
AP + PPP
Sbjct: 1440 APETPPPP 1447
>sp|MATRX_RABVN|MATRIX protein|Rabies virus (strain Nishigahara RCEH)
Query: 2 APASVPP 8
+PAS PP
Sbjct: 20 SPASAPP 26
>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57
Query: 6 VPPPP 10
VPPPP
Sbjct: 417 VPPPP 421
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 APASVPPP 9
AP + PPP
Sbjct: 1450 APETPPPP 1457
>sp|VE2_HPV57|REGULATORY protein E2|Human papillomavirus 57
Query: 2 APASVPP 8
AP+S PP
Sbjct: 245 APSSPPP 251
>sp|VP30_EBOZM|TRANSCRIPTIONAL activator VP30|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 3 PASVPPPP 10
P +VPP P
Sbjct: 61 PLTVPPAP 68
>sp|VP30_EBOZ5|TRANSCRIPTIONAL activator VP30|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 3 PASVPPPP 10
P +VPP P
Sbjct: 61 PLTVPPAP 68
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 2 APASVPPP 9
AP + PPP
Sbjct: 1452 APETPPPP 1459
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 APASVPPP 9
AP + PPP
Sbjct: 1441 APETPPPP 1448
>sp|UL138_HCMVM|PROTEIN UL138|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 SVPPP 9
SVPPP
Sbjct: 128 SVPPP 132
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 APASVPPP 9
AP + PPP
Sbjct: 1444 APETPPPP 1451
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 2 APASVPPP 9
AP + PPP
Sbjct: 1458 APETPPPP 1465
>sp|MATRX_RABVH|MATRIX protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 APASVPP 8
+PAS PP
Sbjct: 20 SPASAPP 26
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 6 VPPPP 10
VPPPP
Sbjct: 511 VPPPP 515
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 2 APASVPPP 9
AP + PPP
Sbjct: 1451 APETPPPP 1458
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 2 APASVPPP 9
AP + PPP
Sbjct: 1453 APETPPPP 1460
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 2 APASVPPP 9
AP + PPP
Sbjct: 1442 APETPPPP 1449
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 2 APASVPPP 9
AP + PPP
Sbjct: 1442 APETPPPP 1449
>sp|V_MEASY|NON-STRUCTURAL protein V|Measles virus (strain Yamagata-1) (MeV)
Query: 5 SVPPPP 10
+VPPPP
Sbjct: 211 NVPPPP 216
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 2 APASVPPP 9
AP + PPP
Sbjct: 1442 APDTPPPP 1449
>sp|V_MEASC|NON-STRUCTURAL protein V|Measles virus (strain Ichinose-B95a) (MeV)
Query: 5 SVPPPP 10
+VPPPP
Sbjct: 211 NVPPPP 216
>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a
Query: 6 VPPPP 10
VPPPP
Sbjct: 416 VPPPP 420
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 AAPASVPPP 9
A PASVP P
Sbjct: 473 AVPASVPEP 481
>sp|V_MEASI|NON-STRUCTURAL protein V|Measles virus (strain IP-3-Ca) (MeV)
Query: 5 SVPPPP 10
+VPPPP
Sbjct: 211 NVPPPP 216
>sp|VL1_HPV63|MAJOR capsid protein L1|Human papillomavirus type 63
Query: 3 PASVPPP 9
P +VPPP
Sbjct: 434 PDNVPPP 440
>sp|UNG_HHV11|URACIL-DNA glycosylase|Human herpesvirus 1 (strain 17)
Query: 4 ASVPPPP 10
A+VPPPP
Sbjct: 195 ANVPPPP 201
>sp|ORF50_HHV8P|REPLICATION and transcription activator|Human herpesvirus 8 type P
Query: 1 AAPASVPPP 9
AP+S PPP
Sbjct: 444 CAPSSTPPP 452
>sp|PHOSP_MEASY|PHOSPHOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 5 SVPPPP 10
+VPPPP
Sbjct: 211 NVPPPP 216
29|SequenceR|150|141|PPAAEAAPAS
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PPAAEAAP 8
PPAA +AP
Sbjct: 581 PPAANSAP 588
>sp|PAP1_ORFN2|POLY(A) polymerase catalytic subunit|Orf virus (strain NZ2) (OV
Query: 1 PPAAEAAPAS 10
PP EAAP +
Sbjct: 137 PPPEEAAPMA 146
>sp|BFRF2_EBVB9|LATE gene expression regulator BFRF2|Epstein-Barr virus (strain B95-8)
Query: 1 PPAAEAAPAS 10
PPA+EAA AS
Sbjct: 68 PPASEAAVAS 77
>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3
Query: 1 PPAAEAAPAS 10
PP +APA+
Sbjct: 319 PPKLRSAPAA 328
>sp|MB43_HHV11|MEMBRANE protein UL43|Human herpesvirus 1 (strain 17)
Query: 1 PPAAEAAPA 9
PPA E APA
Sbjct: 249 PPADEVAPA 257
30|SequenceR|155|146|TAASAPPAAE
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 AASAPPAAE 10
AAS PPA E
Sbjct: 754 AASVPPAPE 762
31|SequenceR|160|151|AAAAITAASA
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 3 AAITAASA 10
+AITAASA
Sbjct: 1949 SAITAASA 1956
>sp|GAG_FOAMV|GAG polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 AAAAITAASA 10
+++A+TAAS
Sbjct: 634 SSSAVTAASG 643
32|SequenceR|165|156|VVATAAAAAI
***** No hits found ******
33|SequenceR|170|161|TSTPAVVATA
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 PAVVATA 10
P V+ATA
Sbjct: 3312 PTVIATA 3318
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 2 STPAVVATA 10
STP V+A A
Sbjct: 686 STPPVIAPA 694
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 2 STPAVVATA 10
STP V+A A
Sbjct: 683 STPPVIAPA 691
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 4 PAVVATA 10
P V+ATA
Sbjct: 3312 PTVIATA 3318
34|SequenceR|175|166|PAVAVTSTPA
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 1 PAVAVTSTP 9
PA AVT P
Sbjct: 614 PATAVTQQP 622
>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82
Query: 1 PAVAVTSTPA 10
P+VA T TPA
Sbjct: 350 PSVAQTFTPA 359
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 PAVAVTSTPA 10
PA+ V +TP
Sbjct: 1604 PAINVQTTPG 1613
>sp|VIE2_HCMVM|VIRAL transcription factor IE2|Human cytomegalovirus (strain Merlin)
Query: 2 AVAVTSTP 9
+VAVT+TP
Sbjct: 126 SVAVTNTP 133
>sp|VIE2_HCMVT|VIRAL transcription factor IE2|Human cytomegalovirus (strain Towne)
Query: 2 AVAVTSTP 9
+VAVT+TP
Sbjct: 126 SVAVTNTP 133
>sp|VIE2_HCMVA|VIRAL transcription factor IE2|Human cytomegalovirus (strain AD169)
Query: 2 AVAVTSTP 9
+VAVT+TP
Sbjct: 126 SVAVTNTP 133
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 1 PAVAVTSTP 9
PA AVT P
Sbjct: 614 PATAVTQQP 622
35|SequenceR|180|171|LASAVPAVAV
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 AVPAVAV 10
A+P+VAV
Sbjct: 22 AIPSVAV 28
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 SAVPAVA 9
SA+PA+A
Sbjct: 4082 SAIPALA 4088
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 SAVPAVA 9
SA+PA+A
Sbjct: 4132 SAIPALA 4138
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 SAVPAVA 9
SA+PA+A
Sbjct: 4082 SAIPALA 4088
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 SAVPAVA 9
SA+PA+A
Sbjct: 4132 SAIPALA 4138
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 4 AVPAVAV 10
A+P+VAV
Sbjct: 22 AIPSVAV 28
36|SequenceR|185|176|KTKKELASAV
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 KTKKELAS 8
KTK+ LAS
Sbjct: 580 KTKQTLAS 587
37|SequenceR|190|181|YPGKSKTKKE
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 YPGKSKTKK 9
+PG KT+K
Sbjct: 1699 HPGSGKTRK 1707
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 YPGKSKTKK 9
+PG KT+K
Sbjct: 1699 HPGSGKTRK 1707
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 YPGKSKTKK 9
+PG KT+K
Sbjct: 1699 HPGSGKTRK 1707
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 YPGKSKTKK 9
+PG KT+K
Sbjct: 1699 HPGSGKTRK 1707
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 YPGKSKTKK 9
+PG KT+K
Sbjct: 1667 HPGAGKTRK 1675
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 YPGKSKTKK 9
+PG KT+K
Sbjct: 1693 HPGSGKTRK 1701
>sp|NEC1_HHV2H|NUCLEAR egress protein 1|Human herpesvirus 2 (strain HG52)
Query: 2 PGKSKTKK 9
PG+ KT++
Sbjct: 15 PGRDKTRR 22
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 YPGKSKTKK 9
+PG KT+K
Sbjct: 1696 HPGAGKTRK 1704
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 YPGKSKTKK 9
+PG KT+K
Sbjct: 1694 HPGAGKTRK 1702
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 YPGKSKTKK 9
+PG KT+K
Sbjct: 1698 HPGAGKTRK 1706
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 YPGKSKTKK 9
+PG KT+K
Sbjct: 1668 HPGSGKTRK 1676
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 YPGKSKTKK 9
+PG KT+K
Sbjct: 1668 HPGSGKTRK 1676
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 YPGKSKTKK 9
+PG KTK+
Sbjct: 1668 HPGAGKTKR 1676
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 YPGKSKTKK 9
+PG KT+K
Sbjct: 1668 HPGSGKTRK 1676
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 YPGKSKTKK 9
+PG KT+K
Sbjct: 1668 HPGSGKTRK 1676
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 YPGKSKTKK 9
+PG KT+K
Sbjct: 1668 HPGSGKTRK 1676
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 YPGKSKTKK 9
+PG KTK+
Sbjct: 1668 HPGAGKTKR 1676
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 YPGKSKTKK 9
+PG KTK+
Sbjct: 1668 HPGAGKTKR 1676
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 YPGKSKTKK 9
+PG KTK+
Sbjct: 1668 HPGAGKTKR 1676
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 YPGKSKTKK 9
+PG KTK+
Sbjct: 1668 HPGAGKTKR 1676
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 YPGKSKTKK 9
+PG KTK+
Sbjct: 1669 HPGAGKTKR 1677
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 YPGKSKTKK 9
+PG KTK+
Sbjct: 1669 HPGAGKTKR 1677
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 YPGKSKTKK 9
+PG KTK+
Sbjct: 1669 HPGAGKTKR 1677
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 YPGKSKTKK 9
+PG KTK+
Sbjct: 1669 HPGAGKTKR 1677
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 YPGKSKTKK 9
+PG KTK+
Sbjct: 1669 HPGAGKTKR 1677
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 YPGKSKTKK 9
+PG KTK+
Sbjct: 1669 HPGAGKTKR 1677
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 YPGKSKTKK 9
+PG KTK+
Sbjct: 1669 HPGAGKTKR 1677
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 YPGKSKTKK 9
YP KSK K+
Sbjct: 139 YPFKSKNKE 147
>sp|VP6_CTFVL|UNCHARACTERIZED protein VP6|Colorado tick fever virus (strain
Query: 1 YPGKSKTKK 9
Y G +KTK+
Sbjct: 198 YKGDTKTKR 206
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 YPGKSKTKK 9
+PG KTK+
Sbjct: 1259 HPGAGKTKR 1267
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 YPGKSKTKK 9
+PG KT++
Sbjct: 1683 HPGAGKTRR 1691
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 YPGKSKTKK 9
+PG KT++
Sbjct: 1683 HPGAGKTRR 1691
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 YPGKSKTKK 9
+PG KT++
Sbjct: 1683 HPGAGKTRR 1691
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 YPGKSKTKK 9
+PG KT++
Sbjct: 1683 HPGAGKTRR 1691
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 YPGKSKTKK 9
+PG KT++
Sbjct: 1683 HPGAGKTRR 1691
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 YPGKSKTKK 9
+PG KT++
Sbjct: 1683 HPGAGKTRR 1691
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 YPGKSKTKK 9
+PG KT++
Sbjct: 1692 HPGAGKTRR 1700
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 YPGKSKTKK 9
+PG KT++
Sbjct: 1669 HPGSGKTRR 1677
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 YPGKSKTKK 9
+PG KT++
Sbjct: 1683 HPGAGKTRR 1691
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 YPGKSKTKK 9
+PG KT++
Sbjct: 1683 HPGAGKTRR 1691
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 YPGKSKTKK 9
+PG KT++
Sbjct: 1670 HPGSGKTRR 1678
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 YPGKSKTKK 9
+PG KT++
Sbjct: 1670 HPGSGKTRR 1678
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 YPGKSKTKK 9
+PG KT++
Sbjct: 1693 HPGAGKTRR 1701
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 YPGKSKTKK 9
+PG KT++
Sbjct: 1683 HPGAGKTRR 1691
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 YPGKSKTKK 9
+PG KT++
Sbjct: 1700 HPGAGKTRR 1708
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 YPGKSKTKK 9
+PG KT++
Sbjct: 1700 HPGAGKTRR 1708
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 YPGKSKTKK 9
+PG KT++
Sbjct: 1697 HPGAGKTRR 1705
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 YPGKSKTKK 9
+PG KT++
Sbjct: 1697 HPGAGKTRR 1705
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 YPGKSKTKK 9
+PG KT++
Sbjct: 1698 HPGAGKTRR 1706
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 YPGKSKTKK 9
+PG KT++
Sbjct: 1698 HPGAGKTRR 1706
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PGKSKTKKE 10
PG KT+ E
Sbjct: 73 PGSKKTQGE 81
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 YPGKSKTKK 9
+PG KT++
Sbjct: 1692 HPGAGKTRR 1700
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PGKSKTKKE 10
PG KT+ E
Sbjct: 73 PGSKKTQGE 81
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PGKSKTKKE 10
PG KT+ E
Sbjct: 73 PGSKKTQGE 81
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PGKSKTKKE 10
PG KT+ E
Sbjct: 73 PGSKKTQGE 81
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PGKSKTKKE 10
PG KT+ E
Sbjct: 73 PGSKKTQGE 81
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PGKSKTKKE 10
PG KT+ E
Sbjct: 73 PGSKKTQGE 81
>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)
Query: 4 KSKTKKE 10
++KTKKE
Sbjct: 165 RNKTKKE 171
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PGKSKTKKE 10
PG KT+ E
Sbjct: 73 PGSKKTQGE 81
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PGKSKTKKE 10
PG KT+ E
Sbjct: 73 PGSKKTQGE 81
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 YPGKSKTKK 9
+PG KT++
Sbjct: 1687 HPGAGKTRR 1695
>sp|VP2_POVJC|MINOR capsid protein VP2|JC polyomavirus (JCPyV) (JCV)
Query: 2 PGKSKTKKE 10
P K K +KE
Sbjct: 317 PNKKKRRKE 325
38|SequenceR|195|186|CLACIYPGKS
>sp|SCAF_HHV7J|CAPSID scaffolding protein|Human herpesvirus 7 (strain JI)
Query: 1 CLACIYPGKS 10
CL I+PG S
Sbjct: 106 CLNSIFPGLS 115
>sp|PG104_MONPV|PROTEIN OPG104|Monkeypox virus (MPXV)
Query: 4 CIYPGKS 10
CIYP KS
Sbjct: 21 CIYPDKS 27
>sp|PG104_VACCC|PROTEIN OPG104|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 CIYPGKS 10
CIYP KS
Sbjct: 21 CIYPDKS 27
>sp|J5_VACCA|PROTEIN J5|Vaccinia virus (strain Ankara) (VACV)
Query: 4 CIYPGKS 10
CIYP KS
Sbjct: 21 CIYPDKS 27
>sp|PG104_VAR67|PROTEIN OPG104|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 CIYPGKS 10
CIYP KS
Sbjct: 21 CIYPDKS 27
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 2 LACIYPGKS 10
L CI P KS
Sbjct: 509 LLCILPSKS 517
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank
Query: 2 LACIYPGKS 10
L CI P KS
Sbjct: 509 LLCILPSKS 517
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 2 LACIYP 7
LACI+P
Sbjct: 571 LACIHP 576
>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong
Query: 3 ACIYPGKS 10
AC Y GKS
Sbjct: 150 ACPYQGKS 157
>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 ACIYPGKS 10
AC Y GKS
Sbjct: 142 ACPYQGKS 149
>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 3 ACIYPGKS 10
AC Y GKS
Sbjct: 150 ACPYQGKS 157
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 LACIYP 7
LACI+P
Sbjct: 571 LACIHP 576
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 LACIYP 7
LACI+P
Sbjct: 571 LACIHP 576
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 LACIYP 7
LACI+P
Sbjct: 571 LACIHP 576
>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky
Query: 3 ACIYPGKS 10
AC Y GKS
Sbjct: 150 ACPYNGKS 157
>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 ACIYPGKS 10
AC Y GKS
Sbjct: 150 ACPYNGKS 157
>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 ACIYPGKS 10
AC Y GKS
Sbjct: 150 ACPYNGKS 157
>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea
Query: 3 ACIYPGKS 10
AC Y GKS
Sbjct: 148 ACPYNGKS 155
>sp|RL11_HCMVM|MEMBRANE glycoprotein RL11|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 CIYPG 8
C YPG
Sbjct: 150 CFYPG 154
>sp|SCAF_HHV6Z|CAPSID scaffolding protein|Human herpesvirus 6B (strain Z29)
Query: 1 CLACIYPGKS 10
CL+ +PG S
Sbjct: 107 CLSSSFPGLS 116
>sp|IR11_HCMVA|VIRAL Fc-gamma receptor-like protein IR11|Human cytomegalovirus (strain
Query: 4 CIYPG 8
C YPG
Sbjct: 150 CFYPG 154
>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 ACIYPGKS 10
AC Y GKS
Sbjct: 150 ACPYLGKS 157
>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 ACIYPGKS 10
AC Y GKS
Sbjct: 139 ACPYLGKS 146
>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 ACIYPGKS 10
AC Y GKS
Sbjct: 139 ACPYLGKS 146
>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky
Query: 3 ACIYPGKS 10
AC Y GKS
Sbjct: 139 ACPYLGKS 146
>sp|SCAF_HHV6U|CAPSID scaffolding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 CLACIYPGKS 10
CL+ +PG S
Sbjct: 107 CLSSSFPGLS 116
>sp|IR12_HCMVA|UNCHARACTERIZED protein IRL12|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 CLACI 5
C+ACI
Sbjct: 377 CMACI 381
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 CLACIYPG 8
C C+ PG
Sbjct: 1537 CAVCLPPG 1544
>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003
Query: 3 ACIYPGKS 10
AC Y G+S
Sbjct: 150 ACPYQGRS 157
>sp|HEMA_I02A7|HEMAGGLUTININ A virus (strain A/Teal/China/2978.1/2002
Query: 3 ACIYPGKS 10
AC Y G+S
Sbjct: 146 ACPYQGRS 153
>sp|US20_HCMVM|MEMBRANE protein US20|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CLACIY 6
C++C+Y
Sbjct: 145 CISCVY 150
>sp|RL12_HCMVM|UNCHARACTERIZED protein RL12|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CLACI 5
C+ACI
Sbjct: 375 CIACI 379
>sp|V30K_HCMVE|30 kDa major early protein|Human cytomegalovirus (strain Eisenhardt)
Query: 1 CLACIYP 7
C+ IYP
Sbjct: 85 CICLIYP 91
>sp|NEC1_VZVD|NUCLEAR egress protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 IYPGKS 10
I+PGKS
Sbjct: 244 IFPGKS 249
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 LACIYP 7
L+CI+P
Sbjct: 573 LSCIHP 578
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 LACIYP 7
L+CI+P
Sbjct: 573 LSCIHP 578
>sp|POLG_DEN23|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 CLACIYP 7
CL +YP
Sbjct: 350 CLITVYP 356
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 LACIYP 7
L+CI+P
Sbjct: 573 LSCIHP 578
>sp|YL15_ADE41|UNCHARACTERIZED 12.4 kDa protein in|Human adenovirus F serotype 41
Query: 2 LACIYP 7
+AC++P
Sbjct: 102 MACLFP 107
>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996
Query: 3 ACIYPGKS 10
AC Y G+S
Sbjct: 150 ACPYHGRS 157
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 LACIYPG 8
L C+Y G
Sbjct: 1383 LCCLYSG 1389
>sp|HEMA_I45A0|HEMAGGLUTININ A virus (strain A/USA:Huston/AA/1945
Query: 3 ACIYPGKS 10
AC + GKS
Sbjct: 152 ACSHAGKS 159
>sp|US20_HCMVT|TRANSMEMBRANE protein HWLF3|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 CLACIY 6
C++C+Y
Sbjct: 233 CISCVY 238
>sp|HEMA_I43A0|HEMAGGLUTININ A virus (strain A/USA:Iowa/1943
Query: 3 ACIYPGKS 10
AC + GKS
Sbjct: 151 ACSHAGKS 158
>sp|US20_HCMVA|TRANSMEMBRANE protein HWLF3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 CLACIY 6
C++C+Y
Sbjct: 233 CISCVY 238
39|SequenceR|200|191|KFEKACLACI
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 KFEKACL 7
+FE+ACL
Sbjct: 1212 EFERACL 1218
Query: 2 FEKACLACI 10
F+K C+A I
Sbjct: 2226 FKKKCIALI 2234
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 KFEKACL 7
+FE+ACL
Sbjct: 1212 EFERACL 1218
Query: 2 FEKACLACI 10
F+K C+A I
Sbjct: 2226 FKKKCIALI 2234
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 2 FEKACLACI 10
FE+ LAC+
Sbjct: 486 FERCTLACL 494
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 2 FEKACLACI 10
FE+ LAC+
Sbjct: 470 FERCTLACL 478
>sp|U79_HHV6Z|PROTEIN U79|Human herpesvirus 6B (strain Z29)
Query: 1 KFEKACLA 8
KFEK C A
Sbjct: 147 KFEKECRA 154
>sp|U79_HHV6H|PROTEIN U79/U80|Human herpesvirus 6B (HHV-6 variant
Query: 1 KFEKACLA 8
KFEK C A
Sbjct: 147 KFEKECRA 154
>sp|U79_HHV6U|PROTEIN U79/U80|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 KFEKACLA 8
KFEK C A
Sbjct: 147 KFEKECRA 154
>sp|IR12_HCMVA|UNCHARACTERIZED protein IRL12|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 CLACI 10
C+ACI
Sbjct: 377 CMACI 381
>sp|RDRP_I88A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 FEKACLACI 10
FE +CL I
Sbjct: 103 FENSCLETI 111
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 KFEKACL 7
K+E ACL
Sbjct: 148 KYEIACL 154
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 FEKACLAC 9
++ACL C
Sbjct: 103 LDRACLVC 110
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 KFEKACLACI 10
K + ACL C+
Sbjct: 1335 KKKGACLICL 1344
>sp|NCAP_EBOZM|NUCLEOPROTEIN ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 3 EKACL 7
EKACL
Sbjct: 165 EKACL 169
>sp|NCAP_EBOZ5|NUCLEOPROTEIN ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 3 EKACL 7
EKACL
Sbjct: 165 EKACL 169
>sp|NCAP_EBOSU|NUCLEOPROTEIN ebolavirus (strain Human/Uganda/Gulu/2000) (SEBOV)
Query: 3 EKACL 7
EKACL
Sbjct: 165 EKACL 169
>sp|NCAP_EBOSB|NUCLEOPROTEIN ebolavirus (strain Boniface-76) (SEBOV)
Query: 3 EKACL 7
EKACL
Sbjct: 165 EKACL 169
>sp|NCAP_EBORR|NUCLEOPROTEIN ebolavirus (strain Reston-89) (REBOV)
Query: 3 EKACL 7
EKACL
Sbjct: 165 EKACL 169
>sp|NCAP_EBORE|NUCLEOPROTEIN ebolavirus (strain Philippines-96) (REBOV)
Query: 3 EKACL 7
EKACL
Sbjct: 165 EKACL 169
>sp|NCAP_EBOG4|NUCLEOPROTEIN ebolavirus (strain Gabon-94) (ZEBOV)
Query: 3 EKACL 7
EKACL
Sbjct: 165 EKACL 169
>sp|OBP_HHV7J|REPLICATION origin-binding protein|Human herpesvirus 7 (strain JI)
Query: 2 FEKACLAC 9
FEK+ L C
Sbjct: 366 FEKSILQC 373
40|SequenceR|205|196|LNYGNKFEKA
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LNYGNK 6
LNYGNK
Sbjct: 1123 LNYGNK 1128
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LNYGNK 6
+NYGNK
Sbjct: 1123 VNYGNK 1128
>sp|NEC1_HHV7J|NUCLEAR egress protein 1|Human herpesvirus 7 (strain JI)
Query: 4 GNKFEK 9
G+KFEK
Sbjct: 246 GDKFEK 251
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 3 YGNKFEK 9
YGN F K
Sbjct: 1884 YGNLFSK 1890
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 YGNKFEK 9
YG +FE+
Sbjct: 322 YGEEFER 328
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 YGNKFEK 9
YG +FE+
Sbjct: 322 YGEEFER 328
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 YGNKFEK 9
YG +FE+
Sbjct: 322 YGEEFER 328
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 2 NYGNKF 7
NY N+F
Sbjct: 146 NYNNRF 151
41|SequenceR|210|201|AEHRRLNYGN
>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1
Query: 4 RRLNYGN 10
RRL+YGN
Sbjct: 367 RRLHYGN 373
>sp|M2_I77AC|MATRIX protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 3 HRRLNYG 9
HRR YG
Sbjct: 52 HRRFKYG 58
>sp|M2_I96A0|MATRIX protein 2|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 3 HRRLNYG 9
+RRL YG
Sbjct: 52 YRRLKYG 58
>sp|M2_I85A3|MATRIX protein 2|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 3 HRRLNYG 9
+RRL YG
Sbjct: 52 YRRLKYG 58
>sp|M2_I80A2|MATRIX protein 2|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 3 HRRLNYG 9
+RRL YG
Sbjct: 52 YRRLKYG 58
>sp|M2_I78A3|MATRIX protein 2|Influenza A virus (strain A/Mallard/New
Query: 3 HRRLNYG 9
+RRL YG
Sbjct: 52 YRRLKYG 58
>sp|M2_I77A9|MATRIX protein 2|Influenza A virus (strain A/Equine/New
Query: 3 HRRLNYG 9
+RRL YG
Sbjct: 52 YRRLKYG 58
>sp|M2_I59A0|MATRIX protein 2|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 3 HRRLNYG 9
+RRL YG
Sbjct: 52 YRRLKYG 58
>sp|M2_I05A1|MATRIX protein 2|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 3 HRRLNYG 9
+RRL YG
Sbjct: 52 YRRLKYG 58
>sp|M2_I03A1|MATRIX protein 2|Influenza A virus (strain A/Chicken/Shantou/4231/2003
Query: 3 HRRLNYG 9
+RRL YG
Sbjct: 52 YRRLKYG 58
>sp|M2_I02A7|MATRIX protein 2|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 3 HRRLNYG 9
+RRL YG
Sbjct: 50 YRRLKYG 56
>sp|M2_I02A6|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 HRRLNYG 9
+RRL YG
Sbjct: 52 YRRLKYG 58
>sp|M2_I02A4|MATRIX protein 2|Influenza A virus (strain A/Silky
Query: 3 HRRLNYG 9
+RRL YG
Sbjct: 52 YRRLKYG 58
>sp|M2_I02A2|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 HRRLNYG 9
+RRL YG
Sbjct: 52 YRRLKYG 58
>sp|M2_I02A1|MATRIX protein 2|Influenza A virus (strain A/Guinea
Query: 3 HRRLNYG 9
+RRL YG
Sbjct: 45 YRRLKYG 51
>sp|M2_I01A3|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 HRRLNYG 9
+RRL YG
Sbjct: 52 YRRLKYG 58
>sp|M2_I01A2|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 HRRLNYG 9
+RRL YG
Sbjct: 55 YRRLKYG 61
>sp|M2_I01A0|MATRIX protein 2|Influenza A virus (strain A/Silky
Query: 3 HRRLNYG 9
+RRL YG
Sbjct: 52 YRRLKYG 58
>sp|M2_I00A0|MATRIX protein 2|Influenza A virus (strain A/Duck/Hong
Query: 3 HRRLNYG 9
+RRL YG
Sbjct: 52 YRRLKYG 58
>sp|M2_I000F|MATRIX protein 2|Influenza A virus (strain A/Chicken/Weybridge
Query: 3 HRRLNYG 9
+RRL YG
Sbjct: 52 YRRLKYG 58
>sp|M2_I54A1|MATRIX protein 2|Influenza A virus (strain A/Swine/May/1954
Query: 3 HRRLNYG 9
+RRL YG
Sbjct: 52 YRRLEYG 58
>sp|M2_I18A0|MATRIX protein 2|Influenza A virus (strain A/Brevig
Query: 3 HRRLNYG 9
+RRL YG
Sbjct: 52 YRRLKYG 58
>sp|M2_I02A0|MATRIX protein 2|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 3 HRRLNYG 9
+RRL YG
Sbjct: 52 YRRLKYG 58
>sp|M2_I02A5|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 HRRLNYG 9
+RRL YG
Sbjct: 52 YRRLKYG 58
>sp|M2_I37A0|MATRIX protein 2|Influenza A virus (strain A/Swine/29/1937
Query: 3 HRRLNYG 9
+RRL YG
Sbjct: 52 YRRLEYG 58
>sp|M2_I01A1|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 HRRLNYG 9
+RRL YG
Sbjct: 52 YRRLKYG 58
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 AEHRRL 6
EHRRL
Sbjct: 3089 GEHRRL 3094
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 AEHRRL 6
EHRRL
Sbjct: 3086 GEHRRL 3091
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 AEHRRL 6
EHRRL
Sbjct: 3089 GEHRRL 3094
>sp|M2_I03A0|MATRIX protein 2|Influenza A virus (strain A/Hong
Query: 3 HRRLNYG 9
+RRL YG
Sbjct: 52 YRRLKYG 58
>sp|TEG6_HHV1E|TEGUMENT protein UL55|Human herpesvirus 1 (strain HFEM)
Query: 1 AEHRRL 6
AEHRR+
Sbjct: 175 AEHRRV 180
>sp|VL2_HPV62|MINOR capsid protein L2|Human papillomavirus 62
Query: 2 EHRRLNY 8
+H+RL+Y
Sbjct: 459 KHKRLHY 465
>sp|TEG6_HHV11|TEGUMENT protein UL55|Human herpesvirus 1 (strain 17)
Query: 1 AEHRRL 6
AEHRR+
Sbjct: 175 AEHRRV 180
>sp|M2_I30A0|MATRIX protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 3 HRRLNYG 9
+RRL YG
Sbjct: 52 YRRLKYG 58
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 2 EHRRLNYGN 10
++RR N GN
Sbjct: 1438 KNRRANIGN 1446
>sp|VU54_HHV6U|PROTEIN U54|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 EHRRLNY 8
++RR+NY
Sbjct: 316 KNRRINY 322
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 3 HRRLNYGN 10
+RR N GN
Sbjct: 1447 NRRANIGN 1454
>sp|VP7_ROTGI|OUTER capsid glycoprotein VP7|Rotavirus B (isolate RVB/Rat/United
Query: 4 RRLNYGN 10
+R+N+GN
Sbjct: 211 QRVNWGN 217
>sp|DNB2_ADE12|DNA-BINDING protein|Human adenovirus A serotype 12
Query: 3 HRRLNYGN 10
H+RL Y N
Sbjct: 460 HQRLQYRN 467
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 2 EHRRLNYGN 10
++RR N GN
Sbjct: 1438 KNRRSNIGN 1446
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 2 EHRRLNY 8
EH R NY
Sbjct: 254 EHYRKNY 260
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 2 EHRRLNYGN 10
+HR L YG+
Sbjct: 226 DHRILYYGD 234
>sp|UL35_HCMVA|PROTEIN UL35|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 EHRRL 6
EHRRL
Sbjct: 32 EHRRL 36
>sp|UL35_HCMVM|TEGUMENT protein UL35|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 EHRRL 6
EHRRL
Sbjct: 32 EHRRL 36
42|SequenceR|215|206|AGTHIAEHRR
>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 AGTHIAEHRR 10
+G+++AEH R
Sbjct: 347 SGSNVAEHTR 356
>sp|PG140_VARV|VIRION membrane protein OPG140|Variola virus
Query: 2 GTHIAEHR 9
G H A HR
Sbjct: 68 GKHCAPHR 75
>sp|PG140_VAR67|VIRION membrane protein OPG140|Variola virus (isolate
Query: 2 GTHIAEHR 9
G H A HR
Sbjct: 68 GKHCAPHR 75
>sp|PG140_VACCC|VIRION membrane protein OPG140|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 GTHIAEHR 9
G H A HR
Sbjct: 68 GKHCAPHR 75
>sp|PG140_MONPV|VIRION membrane protein OPG140|Monkeypox virus (MPXV)
Query: 2 GTHIAEHR 9
G H A HR
Sbjct: 68 GKHCAPHR 75
>sp|F13_MCV2|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 2
Query: 2 GTHIAEH 8
GTH A H
Sbjct: 335 GTHYARH 341
>sp|F13_MCV1|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 1
Query: 2 GTHIAEH 8
GTH A H
Sbjct: 335 GTHYARH 341
>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5
Query: 4 HIAEHRR 10
H+A H R
Sbjct: 373 HVASHSR 379
>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2
Query: 4 HIAEHRR 10
H+A H R
Sbjct: 372 HVASHSR 378
43|SequenceR|220|211|VRGAKAGTHI
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 VRGAKAGTH 9
VRG + GTH
Sbjct: 1441 VRGHRPGTH 1449
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 VRGAKAGTH 9
VRG + GTH
Sbjct: 1441 VRGHRPGTH 1449
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 VRGAKAGTH 9
VRG + GTH
Sbjct: 1441 VRGHRPGTH 1449
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VRGAKAGTHI 10
+RGAKA T I
Sbjct: 867 IRGAKALTDI 876
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VRGAKAGTHI 10
+RGAKA T I
Sbjct: 871 LRGAKALTEI 880
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VRGAKAGTHI 10
+RGAKA T I
Sbjct: 864 LRGAKALTDI 873
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VRGAKAGTHI 10
+RGAKA T I
Sbjct: 863 LRGAKALTDI 872
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VRGAKAGTHI 10
+RGAKA T I
Sbjct: 874 LRGAKALTDI 883
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VRGAKAGTHI 10
+RGAKA T I
Sbjct: 866 LRGAKALTDI 875
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VRGAKAGTHI 10
+RGAKA T I
Sbjct: 868 LRGAKALTDI 877
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VRGAKAGTHI 10
+RGAKA T I
Sbjct: 870 LRGAKALTDI 879
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VRGAKAGTHI 10
+RGAKA T I
Sbjct: 875 LRGAKALTDI 884
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VRGAKAGTHI 10
+RGAKA T I
Sbjct: 870 LRGAKALTDI 879
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VRGAKAGTHI 10
+RGAKA T I
Sbjct: 865 LRGAKALTDI 874
>sp|KRB2_MONPV|PSEUDOKINASE OPG198|Monkeypox virus (MPXV)
Query: 5 KAGTHI 10
K+GTHI
Sbjct: 165 KSGTHI 170
>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b
Query: 1 VRGAKAGTHI 10
VRG K G I
Sbjct: 271 VRGGKTGDDI 280
>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47
Query: 1 VRGAKAGTHI 10
VRG K G I
Sbjct: 260 VRGGKTGDDI 269
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 1 VRGAKAGTHI 10
VRG K G I
Sbjct: 262 VRGGKTGDDI 271
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 1 VRGAKAGTHI 10
VRG K G I
Sbjct: 262 VRGGKTGDDI 271
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 1 VRGAKAGTHI 10
VRG K G I
Sbjct: 264 VRGGKTGDDI 273
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 1 VRGAKAGTHI 10
VRG K G I
Sbjct: 262 VRGGKTGDDI 271
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 1 VRGAKAGTHI 10
VRG K G I
Sbjct: 291 VRGGKTGDDI 300
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 1 VRGAKAGTHI 10
VRG K G I
Sbjct: 264 VRGGKTGDDI 273
>sp|VL1_HPV12|MAJOR capsid protein L1|Human papillomavirus 12
Query: 1 VRGAKAGTHI 10
VRG K G I
Sbjct: 262 VRGGKTGDDI 271
>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8
Query: 1 VRGAKAGTHI 10
VRG K G I
Sbjct: 261 VRGGKTGDDI 270
>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5
Query: 1 VRGAKAGTHI 10
VRG K G I
Sbjct: 262 VRGGKTGDDI 271
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VRGAKAGTHI 10
+RGAKA T +
Sbjct: 865 LRGAKALTDV 874
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 5 KAGTH 9
KAGTH
Sbjct: 392 KAGTH 396
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 5 KAGTH 9
KAGTH
Sbjct: 392 KAGTH 396
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 5 KAGTHI 10
KAG HI
Sbjct: 170 KAGAHI 175
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 5 KAGTHI 10
KAG HI
Sbjct: 168 KAGAHI 173
>sp|GLYC_PIARV|PRE-GLYCOPROTEIN polyprotein GP complex|Pichinde mammarenavirus (PICV) (Pichind
Query: 2 RGAKAGTHI 10
RG + G H+
Sbjct: 187 RGGEVGRHL 195
44|SequenceR|225|216|MAGSPVRGAK
>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41
Query: 4 SPVRGAK 10
SP+RGA+
Sbjct: 477 SPLRGAR 483
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 GSPVRGA 9
G PV+GA
Sbjct: 514 GKPVKGA 520
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 GSPVRGA 9
G PV+GA
Sbjct: 514 GKPVKGA 520
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 1 MAGSPVRGA 9
+ G+P+RGA
Sbjct: 139 LVGAPLRGA 147
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 3 GSPVRG 8
G PVRG
Sbjct: 217 GEPVRG 222
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 MAGSPVRGA 9
++GS +RGA
Sbjct: 1697 LSGSVMRGA 1705
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 MAGSPVRGA 9
++GS +RGA
Sbjct: 1697 LSGSVMRGA 1705
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 MAGSPVRGA 9
++GS +RGA
Sbjct: 1697 LSGSVMRGA 1705
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 MAGSPVRGA 9
++GS +RGA
Sbjct: 1697 LSGSVMRGA 1705
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 MAGSPVRGA 9
++GS +RGA
Sbjct: 1697 LSGSVMRGA 1705
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 GSPVRG 8
G PVRG
Sbjct: 804 GRPVRG 809
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 AGSPVRGA 9
A SPV+GA
Sbjct: 688 AISPVQGA 695
>sp|VP1_POVJC|MAJOR capsid protein VP1|JC polyomavirus (JCPyV) (JCV)
Query: 2 AGSPVRG 8
AG PV+G
Sbjct: 133 AGKPVQG 139
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 3 GSPVRGAK 10
G+P RG +
Sbjct: 4 GAPARGCR 11
45|SequenceR|230|221|MTPMKMAGSP
>sp|VE2_HPV63|REGULATORY protein E2|Human papillomavirus type 63
Query: 2 TPMKMAGSP 10
+P++ +GSP
Sbjct: 205 SPLRTSGSP 213
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 TPMKMAGS 9
TP K+AGS
Sbjct: 825 TPKKLAGS 832
>sp|VE8E2_HPV63|PROTEIN E8^E2C|Human papillomavirus type 63
Query: 2 TPMKMAGSP 10
+P++ +GSP
Sbjct: 14 SPLRTSGSP 22
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 PMKMAGS 9
P+K+AG+
Sbjct: 7047 PLKLAGT 7053
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 1 MTPMKMAG 8
+ P KMAG
Sbjct: 584 IIPQKMAG 591
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 1 MTPMKMAG 8
+ P KMAG
Sbjct: 584 IIPQKMAG 591
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 1 MTPMKMAG 8
+ P KMAG
Sbjct: 584 IIPQKMAG 591
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 1 MTPMKMAG 8
+ P KMAG
Sbjct: 584 IIPQKMAG 591
46|SequenceR|235|226|LSLPVMTPMK
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 LSLPVM 6
LSLPVM
Sbjct: 980 LSLPVM 985
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 LSLPVM 6
LSLPVM
Sbjct: 980 LSLPVM 985
>sp|BET_FOAMV|PROTEIN Bet|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 3 LPVMTP 8
LPV+TP
Sbjct: 131 LPVVTP 136
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 2 SLPVMTPM 9
S PV TPM
Sbjct: 407 SEPVFTPM 414
>sp|VGLI_HCMVA|UL37 immediate early glycoprotein|Human cytomegalovirus (strain AD169)
Query: 2 SLPVMTP 8
+LPV TP
Sbjct: 394 TLPVWTP 400
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 2 SLPVMTPM 9
S PV TPM
Sbjct: 423 SEPVFTPM 430
>sp|B3_HHV6Z|PROTEIN B3|Human herpesvirus 6B (strain Z29)
Query: 1 LSLPVMTPMK 10
+SLP PM+
Sbjct: 18 VSLPAFNPMR 27
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 LSLPVMTPMK 10
L LP M PM+
Sbjct: 1931 LGLPGMDPME 1940
>sp|BEL2_SFV3L|PROTEIN Bel-2|Simian foamy virus type 3
Query: 3 LPVMTP 8
LPV+TP
Sbjct: 53 LPVVTP 58
47|SequenceR|240|231|QPVSLLSLPV
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 2 PVSLLSLPV 10
PVS++SLPV
Sbjct: 287 PVSIVSLPV 295
>sp|DUT_HHV6Z|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6B (strain
Query: 1 QPVSLLSLP 9
+P+SLL +P
Sbjct: 72 RPISLLGIP 80
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 PVSLLSL 8
PVSLL+L
Sbjct: 428 PVSLLAL 434
>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)
Query: 2 PVSLLSLPV 10
PV + SLP+
Sbjct: 348 PVPVTSLPI 356
>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PVSLLSLPV 10
PV + SLP+
Sbjct: 348 PVPVTSLPI 356
>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 PVSLLSLPV 10
PV + SLP+
Sbjct: 348 PVPVTSLPI 356
48|SequenceR|245|236|GAGSLQPVSL
>sp|V30K_HCMVE|30 kDa major early protein|Human cytomegalovirus (strain Eisenhardt)
Query: 2 AGSLQPVSL 10
A SL+PVSL
Sbjct: 29 ASSLRPVSL 37
>sp|FUS_PIV5|FUSION glycoprotein F0|Parainfluenza virus 5 (strain W3)
Query: 1 GAGSLQPVSL 10
GAGSL P +L
Sbjct: 16 GAGSLDPAAL 25
>sp|NRAM_I59A0|NEURAMINIDASE A virus (strain A/Chicken/Scotland/1959
Query: 1 GAGSLQPVS 9
GAGS PVS
Sbjct: 331 GAGSCGPVS 339
>sp|NRAM_I97A1|NEURAMINIDASE A virus (strain A/Hong
Query: 1 GAGSLQPVSL 10
G GS PVSL
Sbjct: 312 GTGSCGPVSL 321
>sp|NRAM_I97A0|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 1 GAGSLQPVSL 10
G GS PVSL
Sbjct: 312 GTGSCGPVSL 321
>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 2 AGSLQPVSL 10
AGSL+P L
Sbjct: 471 AGSLRPTDL 479
>sp|LMP2_EBVG|LATENT membrane protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 GAGSLQPVSL 10
G GS+ PV L
Sbjct: 116 GRGSMNPVCL 125
>sp|UL132_HCMVT|ENVELOPE glycoprotein UL132|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 4 SLQPVSL 10
++QPVSL
Sbjct: 258 AMQPVSL 264
>sp|UL132_HCMVA|ENVELOPE glycoprotein UL132|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 SLQPVSL 10
++QPVSL
Sbjct: 258 AMQPVSL 264
>sp|LMP2_EBVA8|LATENT membrane protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 GAGSLQPVSL 10
G GS+ PV L
Sbjct: 116 GRGSMNPVCL 125
>sp|UL49_HCMVA|UNCHARACTERIZED protein UL49|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GAGSLQP 7
G G+LQP
Sbjct: 42 GRGALQP 48
>sp|LMP2_EBVB9|LATENT membrane protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 GAGSLQPVSL 10
G GS+ PV L
Sbjct: 116 GRGSMNPVCL 125
>sp|UL132_HCMVM|ENVELOPE glycoprotein UL132|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 SLQPVSL 10
++QPVSL
Sbjct: 258 AMQPVSL 264
>sp|NRAM_I02A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 1 GAGSLQPVSL 10
G GS P+SL
Sbjct: 311 GTGSCGPMSL 320
>sp|NRAM_I02A1|NEURAMINIDASE A virus (strain A/Guinea
Query: 1 GAGSLQPVSL 10
G GS P+SL
Sbjct: 311 GTGSCGPMSL 320
>sp|NRAM_I07A0|NEURAMINIDASE A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 GAGSLQPVSL 10
G GS PV++
Sbjct: 331 GKGSCNPVTV 340
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 2 AGSLQPVSL 10
+GSL+P L
Sbjct: 470 SGSLRPTDL 478
>sp|NRAM_I96A2|NEURAMINIDASE A virus (strain A/USA:Memphis/10/1996
Query: 1 GAGSLQPVSL 10
G GS PV++
Sbjct: 331 GEGSCNPVTV 340
>sp|NRAM_I96A3|NEURAMINIDASE A virus (strain A/China:Nanchang/11/1996
Query: 1 GAGSLQPVSL 10
G GS PV++
Sbjct: 331 GEGSCNPVTV 340
>sp|NRAM_I00A1|NEURAMINIDASE A virus (strain A/New
Query: 1 GAGSLQPVSL 10
G GS PV++
Sbjct: 331 GEGSCNPVTV 340
>sp|CEP2_HHV6Z|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6B (strain Z29)
Query: 3 GSLQPVSL 10
GS+ PV L
Sbjct: 108 GSISPVDL 115
>sp|NRAM_I02A7|NEURAMINIDASE A virus (strain A/Teal/China/2978.1/2002
Query: 1 GAGSLQPVS 9
G GS PVS
Sbjct: 316 GTGSCGPVS 324
>sp|NRAM_I18A0|NEURAMINIDASE A virus (strain A/Brevig
Query: 1 GAGSLQPVS 9
G GS PVS
Sbjct: 331 GTGSCGPVS 339
>sp|NRAM_I03A0|NEURAMINIDASE A virus (strain A/Hong
Query: 1 GAGSLQPVS 9
G GS PVS
Sbjct: 331 GTGSCGPVS 339
>sp|NRAM_I96A0|NEURAMINIDASE A virus (strain A/Goose/Guangdong/1/1996
Query: 1 GAGSLQPVS 9
G GS PVS
Sbjct: 331 GTGSCGPVS 339
>sp|NRAM_I01A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 1 GAGSLQPVS 9
G GS PVS
Sbjct: 331 GTGSCGPVS 339
>sp|NRAM_I00A0|NEURAMINIDASE A virus (strain A/Duck/Hong
Query: 1 GAGSLQPVS 9
G GS PVS
Sbjct: 331 GTGSCGPVS 339
>sp|UL49_HCMVM|PROTEIN UL49|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GAGSLQP 7
G G+LQP
Sbjct: 42 GRGALQP 48
>sp|NRAM_I01A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 1 GAGSLQPVS 9
G GS PVS
Sbjct: 331 GTGSCGPVS 339
>sp|NRAM_I83A1|NEURAMINIDASE A virus (strain A/Chile/1/1983
Query: 1 GAGSLQPVSL 10
G GS PV++
Sbjct: 331 GKGSCDPVTV 340
>sp|NRAM_I80AA|NEURAMINIDASE A virus (strain A/India/6263/1980
Query: 1 GAGSLQPVSL 10
G GS PV++
Sbjct: 331 GKGSCDPVTV 340
>sp|NRAM_I04A1|NEURAMINIDASE A virus (strain A/Vietnam/1203/2004
Query: 1 GAGSLQPVS 9
G GS PVS
Sbjct: 311 GTGSCGPVS 319
>sp|NRAM_I05A1|NEURAMINIDASE A virus (strain A/Goose/Guangxi/345/2005
Query: 1 GAGSLQPVS 9
G GS PVS
Sbjct: 303 GTGSCGPVS 311
>sp|NRAM_I02A4|NEURAMINIDASE A virus (strain A/Silky
Query: 1 GAGSLQPVS 9
G GS PVS
Sbjct: 311 GTGSCGPVS 319
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 GAGSLQPVSL 10
G+G + PV L
Sbjct: 183 GSGLIPPVEL 192
>sp|NRAM_I03A1|NEURAMINIDASE A virus (strain A/Chicken/Shantou/4231/2003
Query: 1 GAGSLQPVS 9
G GS PVS
Sbjct: 311 GTGSCGPVS 319
>sp|NRAM_I01A0|NEURAMINIDASE A virus (strain A/Silky
Query: 1 GAGSLQPVS 9
G GS PVS
Sbjct: 311 GTGSCGPVS 319
>sp|NRAM_I02A6|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 1 GAGSLQPVS 9
G GS PVS
Sbjct: 311 GTGSCGPVS 319
>sp|NRAM_I02A5|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 1 GAGSLQPVS 9
G GS PVS
Sbjct: 311 GTGSCGPVS 319
49|SequenceR|250|241|EGGGGGAGSL
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GGGGGAGS 9
GGGG +G+
Sbjct: 177 GGGGASGT 184
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GGGGGAGS 9
GGGG +G+
Sbjct: 177 GGGGASGT 184
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 1 EGGGGGAGS 9
EG G AGS
Sbjct: 267 EGAGSAAGS 275
Query: 2 GGGGGAGS 9
GG GAGS
Sbjct: 264 GGEEGAGS 271
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 GGGGAGSL 10
GGG AG+L
Sbjct: 1068 GGGVAGAL 1075
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 GGGGAGSL 10
GGG AG+L
Sbjct: 1046 GGGVAGAL 1053
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 GGGGAGSL 10
GGG AG+L
Sbjct: 1068 GGGVAGAL 1075
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 GGGGAGSL 10
GGG AG+L
Sbjct: 1046 GGGVAGAL 1053
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 2 GGGGG 6
GGGGG
Sbjct: 402 GGGGG 406
>sp|US13_HCMVM|MEMBRANE protein US13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 EGGGG 5
EGGGG
Sbjct: 256 EGGGG 260
>sp|US13_HCMVA|UNCHARACTERIZED protein HVLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 EGGGG 5
EGGGG
Sbjct: 256 EGGGG 260
>sp|VIE2_HCMVT|VIRAL transcription factor IE2|Human cytomegalovirus (strain Towne)
Query: 2 GGGGGAGS 9
GG GGA S
Sbjct: 296 GGFGGAAS 303
>sp|VIE2_HCMVM|VIRAL transcription factor IE2|Human cytomegalovirus (strain Merlin)
Query: 2 GGGGGAGS 9
GG GGA S
Sbjct: 297 GGFGGAAS 304
>sp|VIE2_HCMVA|VIRAL transcription factor IE2|Human cytomegalovirus (strain AD169)
Query: 2 GGGGGAGS 9
GG GGA S
Sbjct: 297 GGFGGAAS 304
>sp|IE247_HCMVT|45 kDa immediate-early protein 2|Human cytomegalovirus (strain Towne)
Query: 2 GGGGGAGS 9
GG GGA S
Sbjct: 127 GGFGGAAS 134
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 3 GGGGAG 8
GGGG G
Sbjct: 156 GGGGQG 161
>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P
Query: 2 GGGGGAGS 9
GGG G G+
Sbjct: 349 GGGSGRGT 356
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 GGGGAGSL 10
GGG AG++
Sbjct: 1153 GGGIAGAI 1160
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 GGGGAGSL 10
GGG AG++
Sbjct: 1153 GGGIAGAI 1160
>sp|VIE3_HCMVT|30 kDa immediate-early protein 2|Human cytomegalovirus (strain Towne)
Query: 2 GGGGGAGS 9
GG GGA S
Sbjct: 127 GGFGGAAS 134
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 2 GGGGGAG 8
GG GG+G
Sbjct: 2518 GGDGGSG 2524
50|SequenceR|255|246|GGAGAEGGGG
>sp|US13_HCMVM|MEMBRANE protein US13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 6 EGGGG 10
EGGGG
Sbjct: 256 EGGGG 260
>sp|US13_HCMVA|UNCHARACTERIZED protein HVLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 EGGGG 10
EGGGG
Sbjct: 256 EGGGG 260
>sp|DNLI_VARV|DNA ligase|Variola virus
Query: 2 GAGAEGG 8
G GA+GG
Sbjct: 422 GKGAKGG 428
>sp|DNLI_VAR67|DNA ligase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 GAGAEGG 8
G GA+GG
Sbjct: 422 GKGAKGG 428
>sp|DNLI_VACCC|DNA ligase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 GAGAEGG 8
G GA+GG
Sbjct: 422 GKGAKGG 428
>sp|DNLI_VACCA|DNA ligase|Vaccinia virus (strain Ankara) (VACV)
Query: 2 GAGAEGG 8
G GA+GG
Sbjct: 422 GKGAKGG 428
>sp|LRP1_HHV1F|LATENCY-RELATED protein 1|Human herpesvirus 1 (strain F)
Query: 3 AGAEGG 8
AGAEGG
Sbjct: 269 AGAEGG 274
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 2 GAGAEGG 8
G G EGG
Sbjct: 827 GEGEEGG 833
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 2 GAGAEGG 8
G G EGG
Sbjct: 827 GEGEEGG 833
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 2 GAGAEGG 8
G G EGG
Sbjct: 826 GEGEEGG 832
>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)
Query: 2 GAGAEGG 8
G G EGG
Sbjct: 827 GEGEEGG 833
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 GAGAEGGGG 10
G GA+G G
Sbjct: 219 GVGAKGDSG 227
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 GAGAEGGGG 10
G GA+G G
Sbjct: 219 GVGAKGDSG 227
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 GAGAEGGGG 10
G GA+G G
Sbjct: 218 GVGAKGDSG 226
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 GAGAEGGGG 10
G GA+G G
Sbjct: 219 GVGAKGDSG 227
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 GAGAEGGGG 10
G GA+G G
Sbjct: 219 GVGAKGDSG 227
>sp|ENV_HTL1N|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 2 GAGAEGG 8
GAG GG
Sbjct: 327 GAGVAGG 333
>sp|ENV_HTL1M|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 2 GAGAEGG 8
GAG GG
Sbjct: 327 GAGVAGG 333
>sp|ENV_HTL1A|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 2 GAGAEGG 8
GAG GG
Sbjct: 327 GAGVAGG 333
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 2 GAGAEGGGG 10
GAG+ G G
Sbjct: 268 GAGSAAGSG 276
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 2 GAGAEGG 8
GAG++GG
Sbjct: 111 GAGSDGG 117
51|SequenceR|260|251|VAAAGGGAGA
>sp|VE7_HPV49|PROTEIN E7|Human papillomavirus type 49
Query: 1 VAAAGGGAGA 10
+A GGG GA
Sbjct: 54 IATCGGGCGA 63
>sp|NCAP_LASSG|NUCLEOPROTEIN virus (strain GA391) (LASV)
Query: 4 AGGGAGA 10
+GGG GA
Sbjct: 150 SGGGKGA 156
>sp|VL2_HPV29|MINOR capsid protein L2|Human papillomavirus 29
Query: 1 VAAAGGGAGA 10
+A GGG GA
Sbjct: 365 MAFTGGGRGA 374
52|SequenceR|265|256|VGGAAVAAAG
>sp|GP42_EBVG|GLYCOPROTEIN 42|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 GGAAVAAAG 10
GG VAAA
Sbjct: 33 GGGRVAAAA 41
>sp|GP42_EBVB9|GLYCOPROTEIN 42|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 GGAAVAAAG 10
GG VAAA
Sbjct: 33 GGGRVAAAA 41
53|SequenceR|270|261|ATTTVVGGAA
>sp|NEC2_EBVB9|NUCLEAR egress protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 TVVGGA 9
TVVGGA
Sbjct: 301 TVVGGA 306
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 ATTTVVGGAA 10
A+TT+ GG A
Sbjct: 383 ASTTITGGVA 392
>sp|POLG_HCVTH|GENOME polyprotein|Hepatitis C virus (isolate TH)
Query: 1 ATTTVVGGAA 10
A TTV GG+A
Sbjct: 267 AETTVTGGSA 276
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 TTVVGGA 9
TT++GG
Sbjct: 141 TTIIGGG 147
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 ATTTVVGGAA 10
ATT V GG A
Sbjct: 383 ATTQVTGGTA 392
54|SequenceR|275|266|IRKGSATTTV
***** No hits found ******
55|SequenceR|280|271|AHNKRIRKGS
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 HNKRIRKG 9
NK +RKG
Sbjct: 319 QNKSVRKG 326
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 HNKRIRKG 9
NK +RKG
Sbjct: 319 QNKSVRKG 326
>sp|PG121_MONPV|MRNA-DECAPPING protein OPG121|Monkeypox virus (MPXV)
Query: 4 KRIRKGS 10
+R+RKGS
Sbjct: 89 RRLRKGS 95
>sp|PG121_VAR67|MRNA-DECAPPING protein OPG121|Variola virus (isolate Human/India/Ind3/1967)
Query: 4 KRIRKGS 10
+R+RKGS
Sbjct: 89 RRLRKGS 95
>sp|D9_VARV|MRNA-DECAPPING protein D9|Variola virus
Query: 4 KRIRKGS 10
+R+RKGS
Sbjct: 89 RRLRKGS 95
>sp|PG121_VACCC|MRNA-DECAPPING protein OPG121|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 KRIRKGS 10
+R+RKGS
Sbjct: 89 RRLRKGS 95
56|SequenceR|285|276|GCMECAHNKR
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 1 GCMECAHN 8
GC EC +N
Sbjct: 542 GCEECRYN 549
>sp|CEP2_VZVD|CYTOPLASMIC envelopment protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 GCMECAH 7
GC EC H
Sbjct: 226 GCDECNH 232
>sp|UL49_HHV8P|PROTEIN ORF66|Human herpesvirus 8 type P
Query: 2 CMECAH 7
CMEC H
Sbjct: 295 CMECGH 300
>sp|ATI_VAR67|A-TYPE inclusion protein A25 homolog|Variola virus (isolate
Query: 4 ECAHNKR 10
EC HN++
Sbjct: 630 ECTHNQK 636
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 GCMEC-----AHNKR 10
GC+EC +NKR
Sbjct: 902 GCVECRRMFIMYNKR 916
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 4 ECAHNKR 10
EC H KR
Sbjct: 117 ECTHRKR 123
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 1 GCMEC-----AHNKR 10
GC+EC +NKR
Sbjct: 579 GCVECRRMFIMYNKR 593
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 1 GCMECAH 7
GC+ CAH
Sbjct: 566 GCIVCAH 572
>sp|RIR2_HHV1K|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain KOS)
Query: 2 CMECAHNK 9
C+E AH++
Sbjct: 122 CIEVAHSR 129
>sp|POLG_HCVH8|GENOME polyprotein|Hepatitis C virus (isolate HCT18)
Query: 1 GCMECAH 7
GC+ C H
Sbjct: 109 GCVPCVH 115
>sp|ORF0_VZVD|MEMBRANE protein 0|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 CMECAHN 8
C++CA++
Sbjct: 74 CLDCAYD 80
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 2 CMECAH 7
C++C H
Sbjct: 948 CLQCPH 953
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 3 MECAHNK 9
+EC H K
Sbjct: 924 LECGHKK 930
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 4 ECAHNKR 10
EC NKR
Sbjct: 912 ECPFNKR 918
>sp|ORF0_VZVO|MEMBRANE protein 0|Varicella-zoster virus (strain Oka vaccine)
Query: 2 CMECAHN 8
C++CA++
Sbjct: 74 CLDCAYD 80
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 1 GCMECAHNK 9
GC +C K
Sbjct: 1336 GCCDCGSTK 1344
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 GCMECAHNK 9
GC +CA+ +
Sbjct: 1174 GCPKCAYGR 1182
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 GCMECAHNK 9
GC +CA+ +
Sbjct: 1174 GCPKCAYGR 1182
>sp|GD_HHV1P|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Patton)
Query: 4 ECAHNK 9
EC++NK
Sbjct: 142 ECSYNK 147
>sp|GD_HHV1K|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain KOS)
Query: 4 ECAHNK 9
EC++NK
Sbjct: 142 ECSYNK 147
>sp|GD_HHV1H|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain HZT)
Query: 4 ECAHNK 9
EC++NK
Sbjct: 141 ECSYNK 146
>sp|GD_HHV1F|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain F)
Query: 4 ECAHNK 9
EC++NK
Sbjct: 142 ECSYNK 147
>sp|GD_HHV1A|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Angelotti)
Query: 4 ECAHNK 9
EC++NK
Sbjct: 142 ECSYNK 147
>sp|GD_HHV11|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain 17)
Query: 4 ECAHNK 9
EC++NK
Sbjct: 142 ECSYNK 147
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 GCMECAHNK 9
GC +CA+ +
Sbjct: 1174 GCPKCAYGR 1182
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 GCMECAHNK 9
GC +CA+ +
Sbjct: 1174 GCPKCAYGR 1182
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 GCMECAHNK 9
GC +CA+ +
Sbjct: 1174 GCPKCAYGR 1182
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 GCMECAHNK 9
GC +CA+ +
Sbjct: 1174 GCPKCAYGR 1182
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 GCMECAHNK 9
GC +CA+ +
Sbjct: 1174 GCPKCAYGR 1182
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 GCMECAHNK 9
GC +CA+ +
Sbjct: 1174 GCPKCAYGR 1182
>sp|POLG_HCVE1|GENOME polyprotein|Hepatitis C virus (isolate EC1)
Query: 1 GCMECAH 7
GC+ C H
Sbjct: 109 GCVPCVH 115
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 GCMECAHNKR 10
G M C NK+
Sbjct: 1362 GLMACNPNKK 1371
>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2
Query: 3 MECAHNKR 10
++CAH+ R
Sbjct: 708 VDCAHHLR 715
>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1
Query: 3 MECAHNKR 10
++CAH+ R
Sbjct: 706 VDCAHHLR 713
>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)
Query: 3 MECAHN 8
++C HN
Sbjct: 273 LQCGHN 278
>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 3 MECAHN 8
++C HN
Sbjct: 273 LQCGHN 278
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 GCMECAHNK 9
GC CA+ +
Sbjct: 1174 GCPRCAYGR 1182
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 2 CMECA 6
CM CA
Sbjct: 1132 CMSCA 1136
>sp|BRRF2_EBVG|TEGUMENT protein BRRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 GCMEC 5
GC EC
Sbjct: 131 GCPEC 135
>sp|BRRF2_EBVB9|TEGUMENT protein BRRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 GCMEC 5
GC EC
Sbjct: 131 GCPEC 135
>sp|BRRF2_EBVA8|TEGUMENT protein BRRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 GCMEC 5
GC EC
Sbjct: 131 GCPEC 135
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 CMECAHNK 9
CM C + K
Sbjct: 281 CMPCCYEK 288
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 2 CMECAHNK 9
CM C + K
Sbjct: 280 CMPCCYEK 287
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 CMECAHNK 9
CM C + K
Sbjct: 282 CMPCCYEK 289
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 CMECAHNK 9
CM C + K
Sbjct: 282 CMPCCYEK 289
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 CMECAHNK 9
CM C + K
Sbjct: 282 CMPCCYEK 289
57|SequenceR|290|281|DRFAKGCMEC
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 DRFAKG 6
DRFA+G
Sbjct: 463 DRFAQG 468
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 2 RFAKGCMEC 10
RF+K EC
Sbjct: 291 RFSKNAEEC 299
>sp|CEP2_VZVD|CYTOPLASMIC envelopment protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 AKGCMEC 10
A GC EC
Sbjct: 224 ADGCDEC 230
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 2 RFAKGCMEC 10
RF+K EC
Sbjct: 290 RFSKNAEEC 298
>sp|VPX_HV2EH|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 3 FAKGC 7
FAKGC
Sbjct: 82 FAKGC 86
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 6 GCMEC 10
GC+EC
Sbjct: 902 GCVEC 906
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 2 RFAKGCME 9
+FAK C E
Sbjct: 967 QFAKQCYE 974
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 2 RFAKGCME 9
+FAK C E
Sbjct: 967 QFAKQCYE 974
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 2 RFAKGCME 9
+FAK C E
Sbjct: 967 QFAKQCYE 974
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 RFAKGCME 9
+FAK C E
Sbjct: 967 QFAKQCYE 974
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 RFAKGCME 9
+FAK C E
Sbjct: 959 QFAKQCYE 966
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 2 RFAKGCME 9
+FAK C E
Sbjct: 967 QFAKQCYE 974
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 2 RFAKGCME 9
+FAK C E
Sbjct: 967 QFAKQCYE 974
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 2 RFAKGCME 9
+FAK C E
Sbjct: 967 QFAKQCYE 974
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 2 RFAKGCME 9
+FAK C E
Sbjct: 967 QFAKQCYE 974
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 6 GCMEC 10
GC+EC
Sbjct: 579 GCVEC 583
>sp|TRM1_HHV6Z|TRIPARTITE terminase subunit 1|Human herpesvirus 6B (strain Z29)
Query: 5 KGCMEC 10
K CM+C
Sbjct: 187 KTCMKC 192
>sp|TRM1_HHV6U|TRIPARTITE terminase subunit 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 KGCMEC 10
K CM+C
Sbjct: 187 KTCMKC 192
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 DRFAKGCM 8
D F +GC+
Sbjct: 1708 DNFDEGCI 1715
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 DRFAKGCM 8
D F +GC+
Sbjct: 1622 DNFDEGCI 1629
>sp|E3145_ADE03|EARLY E3 15.3 kDa protein|Human adenovirus B serotype 3
Query: 5 KGCMEC 10
KGC++C
Sbjct: 106 KGCIQC 111
>sp|BRRF2_EBVG|TEGUMENT protein BRRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 6 GCMEC 10
GC EC
Sbjct: 131 GCPEC 135
>sp|BRRF2_EBVB9|TEGUMENT protein BRRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 6 GCMEC 10
GC EC
Sbjct: 131 GCPEC 135
>sp|BRRF2_EBVA8|TEGUMENT protein BRRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 6 GCMEC 10
GC EC
Sbjct: 131 GCPEC 135
58|SequenceR|295|286|NLHYVDRFAK
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 LHYVDRF 8
L YVDRF
Sbjct: 322 LAYVDRF 328
>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)
Query: 2 LHYVDRFAK 10
+ YVDRF +
Sbjct: 329 IEYVDRFVR 337
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 3 HYVDRFA 9
HYV +FA
Sbjct: 1000 HYVTKFA 1006
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 YVDRFAK 10
YVDRF +
Sbjct: 383 YVDRFVR 389
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 YVDRFAK 10
YVDRF +
Sbjct: 383 YVDRFVR 389
>sp|W_HENDH|PROTEIN W|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 LHYVDRFAK 10
L Y D FAK
Sbjct: 248 LEYEDEFAK 256
>sp|V_HENDH|NON-STRUCTURAL protein V|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 LHYVDRFAK 10
L Y D FAK
Sbjct: 248 LEYEDEFAK 256
>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 LHYVDRFAK 10
L Y D FAK
Sbjct: 248 LEYEDEFAK 256
>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)
Query: 2 LHYVDRFAK 10
+ YVD+F K
Sbjct: 329 IEYVDQFVK 337
>sp|VP2_POVJC|MINOR capsid protein VP2|JC polyomavirus (JCPyV) (JCV)
Query: 1 NLHYVD 6
N+HY+D
Sbjct: 144 NIHYLD 149
>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LHYVDRFAK 10
+ YVD+F K
Sbjct: 329 IEYVDQFVK 337
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 2 LHYVDR 7
LHY DR
Sbjct: 857 LHYQDR 862
>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P
Query: 2 LHYVDRF 8
+ Y+DRF
Sbjct: 321 MDYIDRF 327
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LHYVDRFAK 10
+H++++FA+
Sbjct: 176 IHHINKFAQ 184
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 1 NLHYVDRF 8
++ +VDRF
Sbjct: 368 HMQFVDRF 375
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 1 NLHYVDRFAK 10
+LHY FAK
Sbjct: 71 DLHYGAVFAK 80
>sp|HELI_HHV2H|DNA replication helicase|Human herpesvirus 2 (strain HG52)
Query: 1 NLHYVDRF 8
++ +VDRF
Sbjct: 367 HMQFVDRF 374
>sp|VIF_HV1A2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 NLHYVDRFAK 10
+LHY D F++
Sbjct: 108 HLHYFDCFSE 117
>sp|E434_ADE40|EARLY E4 34 kDa protein|Human adenovirus F serotype 40
Query: 1 NLHYV 5
N+HYV
Sbjct: 46 NMHYV 50
>sp|VIF_HV1N5|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 NLHYVDRFAK 10
+LHY D F++
Sbjct: 108 HLHYFDCFSE 117
>sp|VIF_HV1ET|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 NLHYVDRFAK 10
++HY D FA+
Sbjct: 108 HMHYFDCFAE 117
>sp|VIF_HV1B5|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 NLHYVDRFA 9
+LHY D F+
Sbjct: 108 HLHYFDCFS 116
>sp|VIF_HV1SE|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 NLHYVDRFA 9
+LHY D F+
Sbjct: 108 HLHYFDCFS 116
>sp|VC02_VACCT|KELCH repeat protein C2|Vaccinia virus (strain Tian Tan)
Query: 1 NLHYVDRFAK 10
N+ Y D F K
Sbjct: 477 NIEYYDMFTK 486
>sp|VC02_VACCC|KELCH repeat protein C2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 NLHYVDRFAK 10
N+ Y D F K
Sbjct: 477 NIEYYDMFTK 486
>sp|VIF_HV1U4|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 NLHYVDRFAK 10
+LHY D F++
Sbjct: 108 HLHYFDCFSE 117
>sp|C2_CWPXG|KELCH repeat protein C2|Cowpox virus (strain GRI-90 /
Query: 1 NLHYVDRFAK 10
N+ Y D F K
Sbjct: 477 NIEYYDMFTK 486
59|SequenceR|300|291|SLKHRNLHYV
>sp|VL2_HPV62|MINOR capsid protein L2|Human papillomavirus 62
Query: 3 KHRNLHY 9
KH+ LHY
Sbjct: 459 KHKRLHY 465
>sp|E434_ADE40|EARLY E4 34 kDa protein|Human adenovirus F serotype 40
Query: 3 KHRNLHYV 10
+H N+HYV
Sbjct: 43 EHLNMHYV 50
>sp|VTF3S_MONPV|INTERMEDIATE transcription factor 3 small|Monkeypox virus (MPXV)
Query: 2 LKHRNLHYV 10
L HR +HY+
Sbjct: 65 LDHREIHYL 73
>sp|VTF3S_VACCC|INTERMEDIATE transcription factor 3 small|Vaccinia virus (strain Copenhagen)
Query: 2 LKHRNLHYV 10
L HR +HY+
Sbjct: 65 LDHREIHYL 73
>sp|VTF3S_VARV|INTERMEDIATE transcription factor 3 small|Variola virus
Query: 2 LKHRNLHYV 10
L HR +HY+
Sbjct: 65 LDHREIHYL 73
>sp|VTF3S_VAR67|INTERMEDIATE transcription factor 3 small|Variola virus (isolate
Query: 2 LKHRNLHYV 10
L HR +HY+
Sbjct: 65 LDHREIHYL 73
>sp|VTF3S_VACCA|INTERMEDIATE transcription factor 3 small|Vaccinia virus (strain Ankara)
Query: 2 LKHRNLHYV 10
L HR +HY+
Sbjct: 65 LDHREIHYL 73
>sp|UL14_HCMVM|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 KHRNLHYV 10
+HR +HY+
Sbjct: 202 RHRVVHYI 209
>sp|UL14_HCMVA|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 KHRNLHYV 10
+HR +HY+
Sbjct: 202 RHRVVHYI 209
>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72
Query: 3 KHRNL 7
KHRNL
Sbjct: 549 KHRNL 553
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 3 KHRNL 7
KHRNL
Sbjct: 549 KHRNL 553
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 KHRNLH 8
K RNLH
Sbjct: 2928 KERNLH 2933
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 KHRNLH 8
K RNLH
Sbjct: 2925 KERNLH 2930
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 KHRNLH 8
K RNLH
Sbjct: 2928 KERNLH 2933
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 3 KHRNLH 8
K RNLH
Sbjct: 2928 KERNLH 2933
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 KHRNLH 8
K RNLH
Sbjct: 2928 KERNLH 2933
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 KHRNLH 8
K RNLH
Sbjct: 2928 KERNLH 2933
>sp|VE2_HPV18|REGULATORY protein E2|Human papillomavirus type 18
Query: 2 LKHRNLHYV 10
+ HR L+YV
Sbjct: 157 VSHRGLYYV 165
>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LKHRNLHYV 10
L+ RNLH +
Sbjct: 624 LEQRNLHQI 632
>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)
Query: 2 LKHRNLHYV 10
L+ RNLH +
Sbjct: 624 LEQRNLHQI 632
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 SLKHRNLH 8
+L +RNLH
Sbjct: 877 NLIYRNLH 884
>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48
Query: 2 LKHRNLH 8
+KH+NL
Sbjct: 494 IKHKNLQ 500
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 SLKHRNLH 8
+L +RNLH
Sbjct: 868 NLIYRNLH 875
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 SLKHRNLH 8
+L +RNLH
Sbjct: 864 NLIYRNLH 871
>sp|TAX_HTL32|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 2 LKHRNLHY 9
L H+ +HY
Sbjct: 292 LSHKLIHY 299
>sp|VE8E2_HPV31|PROTEIN E8^E2C|Human papillomavirus 31
Query: 3 KHRNLHY 9
+HRN H+
Sbjct: 63 EHRNTHH 69
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 SLKHRNLH 8
+L +RNLH
Sbjct: 861 NLIYRNLH 868
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 SLKHRNLH 8
+L +RNLH
Sbjct: 868 NLIYRNLH 875
>sp|PORTL_HHV7J|PORTAL protein|Human herpesvirus 7 (strain JI)
Query: 3 KHRNLH 8
KH NLH
Sbjct: 280 KHENLH 285
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 LKHRNLH 8
+KH +LH
Sbjct: 5561 IKHADLH 5567
>sp|AN_HHV8P|SHUTOFF alkaline exonuclease|Human herpesvirus 8 type P
Query: 3 KHRNLH 8
KHR LH
Sbjct: 449 KHRLLH 454
60|SequenceR|305|296|KEDSHSLKHR
>sp|NEP_I96A2|NUCLEAR export protein|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 3 DSHSLKHR 10
D HSL+HR
Sbjct: 54 DLHSLQHR 61
>sp|NEP_I96A3|NUCLEAR export protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 3 DSHSLKHR 10
D HSL+HR
Sbjct: 54 DLHSLQHR 61
>sp|NEP_I07A0|NUCLEAR export protein|Influenza A virus (strain
Query: 3 DSHSLKHR 10
D HSL+HR
Sbjct: 54 DLHSLQHR 61
>sp|NEP_I00A1|NUCLEAR export protein|Influenza A virus (strain A/New
Query: 3 DSHSLKHR 10
D HSL+HR
Sbjct: 54 DLHSLQHR 61
>sp|UL88_HHV6Z|PROTEIN U59|Human herpesvirus 6B (strain Z29)
Query: 2 EDSHSLKHR 10
E SH + HR
Sbjct: 276 ERSHEIVHR 284
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 4 SHSLKHR 10
+HS+ HR
Sbjct: 1683 THSIMHR 1689
>sp|NRAM_INBME|NEURAMINIDASE B virus (strain B/Memphis/6/1986)
Query: 1 KEDSHSLKH 9
+ED + L+H
Sbjct: 146 REDRNKLRH 154
>sp|NRAM_INBLN|NEURAMINIDASE B virus (strain B/Leningrad/179/1986)
Query: 1 KEDSHSLKH 9
+ED + L+H
Sbjct: 146 REDRNKLRH 154
>sp|NRAM_INBYB|NEURAMINIDASE B virus (strain B/Yamagata/16/1988)
Query: 1 KEDSHSLKH 9
+ED + L+H
Sbjct: 147 REDRNKLRH 155
>sp|NRAM_INBVI|NEURAMINIDASE B virus (strain B/Victoria/3/1985)
Query: 1 KEDSHSLKH 9
+ED + L+H
Sbjct: 146 REDRNKLRH 154
>sp|NRAM_INBMF|NEURAMINIDASE B virus (strain B/Memphis/3/1989)
Query: 1 KEDSHSLKH 9
+ED + L+H
Sbjct: 146 REDRNKLRH 154
>sp|PG187_VACCC|B1 kinase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 EDSHSLKH 9
+ SH++KH
Sbjct: 70 KKSHNIKH 77
>sp|PG187_VACCA|B1 kinase|Vaccinia virus (strain Ankara) (VACV)
Query: 2 EDSHSLKH 9
+ SH++KH
Sbjct: 70 KKSHNIKH 77
>sp|PG187_MONPV|B1 kinase|Monkeypox virus (MPXV)
Query: 2 EDSHSLKH 9
+ SH++KH
Sbjct: 70 KKSHNIKH 77
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 KEDSHSL 7
KED H+L
Sbjct: 2016 KEDLHTL 2022
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 KEDSHSL 7
KED H+L
Sbjct: 2016 KEDLHTL 2022
>sp|NRAM_INBUS|NEURAMINIDASE B virus (strain B/USSR/100/1983)
Query: 1 KEDSHSLKH 9
+ED + L+H
Sbjct: 147 REDRNKLRH 155
>sp|NRAM_INBBE|NEURAMINIDASE B virus (strain B/Beijing/1/1987)
Query: 1 KEDSHSLKH 9
+ED + L+H
Sbjct: 146 REDRNKLRH 154
61|SequenceR|310|301|PCQYPKEDSH
>sp|ETF2_YMTV5|EARLY transcription factor 82 kDa|Yaba monkey tumor virus (strain
Query: 1 PCQYPKEDSH 10
PC + K+ SH
Sbjct: 443 PCCFLKDQSH 452
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 CQYPKED 8
C +P+ED
Sbjct: 56 CTFPEED 62
>sp|RDRP_ROTYO|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8])
Query: 2 CQYPKED 8
C YPK +
Sbjct: 1056 CNYPKSE 1062
>sp|RDRP_ROTWI|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 2 CQYPKED 8
C YPK +
Sbjct: 1056 CNYPKSE 1062
>sp|RDRP_ROTHW|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 2 CQYPKED 8
C YPK +
Sbjct: 1056 CNYPKSE 1062
>sp|RDRP_ROTHT|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 2 CQYPKED 8
C YPK +
Sbjct: 1056 CNYPKSE 1062
>sp|RDRP_ROTHS|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4])
Query: 2 CQYPKED 8
C YPK +
Sbjct: 1056 CNYPKSE 1062
>sp|RDRP_ROTHP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 2 CQYPKED 8
C YPK +
Sbjct: 1056 CNYPKSE 1062
>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 2 CQYPKED 8
C YPK +
Sbjct: 1056 CNYPKSE 1062
>sp|RDRP_ROTHK|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 2 CQYPKED 8
C YPK +
Sbjct: 1056 CNYPKSE 1062
>sp|RDRP_ROTHD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 2 CQYPKED 8
C YPK +
Sbjct: 1056 CNYPKSE 1062
>sp|RDRP_ROTH7|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 2 CQYPKED 8
C YPK +
Sbjct: 1056 CNYPKSE 1062
>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 2 CQYPKED 8
C YPK +
Sbjct: 1056 CNYPKSE 1062
>sp|RDRP_ROTH3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 2 CQYPKED 8
C YPK +
Sbjct: 1056 CNYPKSE 1062
>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 2 CQYPKED 8
C YPK +
Sbjct: 1056 CNYPKSE 1062
>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate
Query: 2 CQYPKED 8
C YPK +
Sbjct: 1056 CNYPKSE 1062
>sp|UL20_VZVD|PROTEIN UL20 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 QYPKEDS 9
Q+P+ED+
Sbjct: 22 QHPEEDA 28
>sp|GE_HHV11|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain 17)
Query: 1 PCQYPKEDSH 10
P YP+ D H
Sbjct: 513 PSVYPRSDGH 522
>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)
Query: 1 PCQYPKEDSH 10
P YP+ D H
Sbjct: 515 PSVYPRSDGH 524
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 PCQYPKEDS 9
P Q P++DS
Sbjct: 826 PIQLPEKDS 834
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 2 CQYPKE 7
C YP+E
Sbjct: 327 CAYPEE 332
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 CQYPKE 7
C YP+E
Sbjct: 327 CAYPEE 332
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 PCQYPKEDS 9
P Q P++DS
Sbjct: 834 PIQLPEKDS 842
>sp|VPR_HV2BE|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 1 PCQYPKED 8
P ++P ED
Sbjct: 5 PTEFPPED 12
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 PCQYPKEDS 9
P Q P++DS
Sbjct: 823 PIQLPEKDS 831
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 PCQYPKEDS 9
P Q P +DS
Sbjct: 824 PIQLPNKDS 832
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 PCQYPKEDS 9
P Q P +DS
Sbjct: 825 PIQLPDKDS 833
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 PCQYPKEDS 9
P Q P +DS
Sbjct: 825 PIQLPDKDS 833
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 PCQYPKEDS 9
P Q P +DS
Sbjct: 825 PIQLPDKDS 833
62|SequenceR|315|306|RQQCVPCQYP
>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus
Query: 1 RQQCVPCQY 9
R+ C+PC +
Sbjct: 438 RKYCIPCCF 446
>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate
Query: 1 RQQCVPCQY 9
R+ C+PC +
Sbjct: 438 RKYCIPCCF 446
>sp|ETF2_VACCT|EARLY transcription factor 82 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 RQQCVPCQY 9
R+ C+PC +
Sbjct: 438 RKYCIPCCF 446
>sp|ETF2_VACCC|EARLY transcription factor 82 kDa|Vaccinia virus (strain Copenhagen)
Query: 1 RQQCVPCQY 9
R+ C+PC +
Sbjct: 438 RKYCIPCCF 446
>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)
Query: 1 RQQCVPCQY 9
R+ C+PC +
Sbjct: 438 RKYCIPCCF 446
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 2 QQCVPCQYP 10
++CVP +P
Sbjct: 933 RRCVPANFP 941
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 2 QQCVPCQYP 10
++CVP +P
Sbjct: 934 RRCVPANFP 942
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 2 QQCVPCQYP 10
++CVP +P
Sbjct: 954 RRCVPANFP 962
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 2 QQCVPCQYP 10
++CVP +P
Sbjct: 935 RRCVPANFP 943
>sp|ETF2_YMTV5|EARLY transcription factor 82 kDa|Yaba monkey tumor virus (strain
Query: 1 RQQCVPCQY 9
++ C+PC +
Sbjct: 438 QKMCIPCCF 446
>sp|ETF2_MCV1|EARLY transcription factor 82 kDa|Molluscum contagiosum virus subtype 1
Query: 1 RQQCVPCQY 9
++ C+PC +
Sbjct: 433 QKMCIPCCF 441
>sp|CAP3_ADE12|PRE-HEXON-LINKING protein IIIa|Human adenovirus A serotype 12
Query: 1 RQQCVPCQY 9
R+Q VP QY
Sbjct: 312 RRQQVPPQY 320
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 5 VPCQYP 10
VPCQ P
Sbjct: 2116 VPCQVP 2121
Query: 4 CVPCQ 8
CVPC+
Sbjct: 226 CVPCE 230
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 5 VPCQYP 10
VPCQ P
Sbjct: 2116 VPCQVP 2121
Query: 4 CVPCQ 8
CVPC+
Sbjct: 226 CVPCE 230
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 5 VPCQYP 10
VPCQ P
Sbjct: 2116 VPCQLP 2121
Query: 4 CVPCQ 8
CVPC+
Sbjct: 226 CVPCE 230
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 5 VPCQYP 10
VPCQ P
Sbjct: 2116 VPCQLP 2121
Query: 4 CVPCQ 8
CVPC+
Sbjct: 226 CVPCE 230
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 6 PCQYP 10
PC++P
Sbjct: 1346 PCEFP 1350
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 6 PCQYP 10
PC++P
Sbjct: 1346 PCEFP 1350
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 6 PCQYP 10
PC++P
Sbjct: 1346 PCEFP 1350
>sp|US20_HCMVM|MEMBRANE protein US20|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RQQCVPCQY 9
R +C+ C Y
Sbjct: 142 RWKCISCVY 150
>sp|POLG_HCVTH|GENOME polyprotein|Hepatitis C virus (isolate TH)
Query: 4 CVPC 7
CVPC
Sbjct: 110 CVPC 113
>sp|POLG_HCVH8|GENOME polyprotein|Hepatitis C virus (isolate HCT18)
Query: 4 CVPC 7
CVPC
Sbjct: 110 CVPC 113
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 5 VPCQYP 10
VPCQ P
Sbjct: 2116 VPCQLP 2121
Query: 4 CVPCQ 8
CVPC+
Sbjct: 226 CVPCE 230
>sp|POLG_HCVH7|GENOME polyprotein|Hepatitis C virus (isolate HCT27)
Query: 4 CVPC 7
CVPC
Sbjct: 98 CVPC 101
>sp|ETF2_VACCA|EARLY transcription factor 82 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 4 CVPCQY 9
C+PC +
Sbjct: 441 CIPCCF 446
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 5 VPCQYP 10
+PCQ P
Sbjct: 2120 IPCQVP 2125
Query: 4 CVPC 7
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 4 CVPCQ 8
CVPC+
Sbjct: 226 CVPCE 230
Query: 5 VPCQYP 10
+PCQ P
Sbjct: 2116 IPCQLP 2121
>sp|VP35_MABVM|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 QCVPC 7
QC PC
Sbjct: 46 QCSPC 50
>sp|VP35_MABVP|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 QCVPC 7
QC PC
Sbjct: 46 QCSPC 50
>sp|VP35_MABVO|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 QCVPC 7
QC PC
Sbjct: 46 QCSPC 50
>sp|VP35_MABVR|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 QCVPC 7
QC PC
Sbjct: 46 QCSPC 50
>sp|VP35_MABVA|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 QCVPC 7
QC PC
Sbjct: 46 QCSPC 50
>sp|VE2_HPV30|REGULATORY protein E2|Human papillomavirus 30
Query: 1 RQQCVPC 7
R Q VPC
Sbjct: 55 RHQVVPC 61
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 4 CVPC 7
CVPC
Sbjct: 226 CVPC 229
Query: 6 PCQYP 10
PCQ P
Sbjct: 2113 PCQVP 2117
>sp|SCAF_HHV8P|CAPSID scaffolding protein|Human herpesvirus 8 type P
Query: 6 PCQYP 10
PCQ+P
Sbjct: 413 PCQFP 417
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 QQCVPC 7
+QCV C
Sbjct: 1149 EQCVEC 1154
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 QQCVPC 7
+QCV C
Sbjct: 1149 EQCVEC 1154
>sp|VE6_HPV33|PROTEIN E6|Human papillomavirus 33
Query: 3 QCVPCQYP 10
QCV C+ P
Sbjct: 29 QCVECKKP 36
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 6 PCQYP 10
PCQ P
Sbjct: 971 PCQLP 975
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 4 CVPC 7
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 4 CVPC 7
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 4 CVPC 7
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 4 CVPC 7
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 CVPC 7
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 CVPC 7
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 CVPC 7
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 4 CVPC 7
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 CVPC 7
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 4 CVPC 7
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 4 CVPC 7
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 4 CVPC 7
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 CVPC 7
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 CVPC 7
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 CVPC 7
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCVE1|GENOME polyprotein|Hepatitis C virus (isolate EC1)
Query: 4 CVPC 7
CVPC
Sbjct: 110 CVPC 113
>sp|VE6_HPV23|PROTEIN E6|Human papillomavirus 23
Query: 2 QQCVPCQY 9
Q C+ CQY
Sbjct: 112 QICIRCQY 119
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 6 PCQYP 10
PCQ P
Sbjct: 2118 PCQVP 2122
63|SequenceR|320|311|DKRKFRQQCV
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 RKFRQQCV 10
R+F Q+C+
Sbjct: 4632 RQFHQKCL 4639
>sp|PG034_VAR67|PROTEIN OPG034|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 DKRKFRQQ 8
D+RKF+++
Sbjct: 203 DRRKFKKE 210
>sp|PG034_VACCC|PROTEIN OPG034|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DKRKFRQQ 8
D+RKF+++
Sbjct: 213 DRRKFKKE 220
>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human
Query: 1 DKRKFRQQ 8
DK+++R+Q
Sbjct: 107 DKKRYRRQ 114
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 DKRKFRQQ 8
DKR +R+Q
Sbjct: 391 DKRIYRRQ 398
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 1 DKRKFRQQ 8
DKR +R+Q
Sbjct: 391 DKRIYRRQ 398
64|SequenceR|325|316|HYSMRDKRKF
>sp|NPH2_VACCC|RNA helicase NPH-II|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 SMRDKRK 9
SMRD+RK
Sbjct: 487 SMRDQRK 493
>sp|NPH2_MONPV|RNA helicase NPH-II|Monkeypox virus (MPXV)
Query: 3 SMRDKRK 9
SMRD+RK
Sbjct: 487 SMRDQRK 493
>sp|NPH2_VARV|RNA helicase NPH-II|Variola virus
Query: 3 SMRDKRK 9
SMRD+RK
Sbjct: 487 SMRDQRK 493
>sp|NPH2_VAR67|RNA helicase NPH-II|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 SMRDKRK 9
SMRD+RK
Sbjct: 487 SMRDQRK 493
>sp|NPH2_VACCT|RNA helicase NPH-II|Vaccinia virus (strain Tian Tan)
Query: 3 SMRDKRK 9
SMRD+RK
Sbjct: 487 SMRDQRK 493
>sp|NPH2_VACCA|RNA helicase NPH-II|Vaccinia virus (strain Ankara) (VACV)
Query: 3 SMRDKRK 9
SMRD+RK
Sbjct: 487 SMRDQRK 493
>sp|VL2_HPV63|MINOR capsid protein L2|Human papillomavirus type 63
Query: 1 HYSMRDKRKF 10
H S+R +RK
Sbjct: 492 HPSLRKRRKL 501
>sp|VL2_HPV1|MINOR capsid protein L2|Human papillomavirus type 1 (Human
Query: 1 HYSMRDKRK 9
H S+R +RK
Sbjct: 495 HPSLRKRRK 503
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 3 SMRDKRKF 10
S RD+R F
Sbjct: 1353 SRRDRRSF 1360
>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33
Query: 1 HYSMRDKRK 9
HY +KRK
Sbjct: 404 HYKKAEKRK 412
>sp|NEC1_EBVB9|NUCLEAR egress protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 HYSMRD 6
H+S+RD
Sbjct: 81 HFSLRD 86
>sp|NEC1_EBVA8|NUCLEAR egress protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 HYSMRD 6
H+S+RD
Sbjct: 81 HFSLRD 86
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 YSMRDKRK 9
+++RDKR+
Sbjct: 154 FNVRDKRE 161
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 HYSMRDK 7
H++++DK
Sbjct: 1195 HFALKDK 1201
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 HYSMRDK 7
H++++DK
Sbjct: 1195 HFALKDK 1201
65|SequenceR|330|321|DHSRVHYSMR
>sp|VTF3S_VARV|INTERMEDIATE transcription factor 3 small|Variola virus
Query: 1 DHSRVHYSMR 10
DH +HY R
Sbjct: 66 DHREIHYLFR 75
>sp|VTF3S_VAR67|INTERMEDIATE transcription factor 3 small|Variola virus (isolate
Query: 1 DHSRVHYSMR 10
DH +HY R
Sbjct: 66 DHREIHYLFR 75
>sp|VTF3S_VACCC|INTERMEDIATE transcription factor 3 small|Vaccinia virus (strain Copenhagen)
Query: 1 DHSRVHYSMR 10
DH +HY R
Sbjct: 66 DHREIHYLFR 75
>sp|VTF3S_VACCA|INTERMEDIATE transcription factor 3 small|Vaccinia virus (strain Ankara)
Query: 1 DHSRVHYSMR 10
DH +HY R
Sbjct: 66 DHREIHYLFR 75
>sp|VTF3S_MONPV|INTERMEDIATE transcription factor 3 small|Monkeypox virus (MPXV)
Query: 1 DHSRVHYSMR 10
DH +HY R
Sbjct: 66 DHREIHYLFR 75
>sp|VL2_HPV62|MINOR capsid protein L2|Human papillomavirus 62
Query: 2 HSRVHY 7
H R+HY
Sbjct: 460 HKRLHY 465
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 2 HSRVHYSM 9
HSR H M
Sbjct: 1821 HSRTHEPM 1828
66|SequenceR|335|326|KHVAGDHSRV
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 HVAGDHSRV 10
H+AG+H ++
Sbjct: 3047 HMAGEHKKL 3055
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 HVAGDHSRV 10
H+AG+H ++
Sbjct: 3044 HMAGEHKKL 3052
>sp|FUS_MEASY|FUSION glycoprotein F0|Measles virus (strain Yamagata-1) (MeV)
Query: 2 HVAGDHSRV 10
H+A DH V
Sbjct: 414 HIAADHCPV 422
>sp|DNBI_ADE12|PROBABLE DNA-binding protein|Human adenovirus A serotype 12
Query: 1 KHVAGDHSRV 10
KHV GD ++V
Sbjct: 178 KHVRGDSAQV 187
>sp|UL32_EBVB9|PACKAGING protein UL32 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 AGDHSR 9
AGDHS+
Sbjct: 331 AGDHSQ 336
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 HVAGDH 7
++AGDH
Sbjct: 281 YIAGDH 286
>sp|CAPSD_LORDV|CAPSID protein VP1|Lordsdale virus (strain GII/Human/United
Query: 2 HVAGDH 7
H+AG H
Sbjct: 292 HIAGSH 297
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 6 DHSRV 10
DHSRV
Sbjct: 1193 DHSRV 1197
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 1 KHVAGDHSR 9
+HV HSR
Sbjct: 621 RHVKNYHSR 629
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 KHVAGDHSR 9
+HV HSR
Sbjct: 619 RHVKNYHSR 627
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 KHVAGDHSR 9
+HV HSR
Sbjct: 620 RHVKNYHSR 628
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 KHVAGDHSR 9
+HV HSR
Sbjct: 620 RHVKNYHSR 628
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 KHVAGDHSR 9
+HV HSR
Sbjct: 620 RHVKNYHSR 628
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 KHVAGDHSR 9
+HV HSR
Sbjct: 619 RHVKNYHSR 627
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 KHVAGDHSR 9
+HV HSR
Sbjct: 619 RHVKNYHSR 627
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 KHVAGDHSR 9
+HV HSR
Sbjct: 621 RHVKNYHSR 629
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 KHVAGDHSR 9
+HV HSR
Sbjct: 621 RHVKNYHSR 629
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 KHVAGDHSR 9
+HV HSR
Sbjct: 621 RHVKNYHSR 629
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 KHVAGDHSR 9
+HV HSR
Sbjct: 619 RHVKNYHSR 627
>sp|VP24_MABVR|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 HVAGDHSR 9
HV DH +
Sbjct: 168 HVVNDHGK 175
>sp|VP24_MABVP|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 HVAGDHSR 9
HV DH +
Sbjct: 168 HVVNDHGK 175
>sp|VP24_MABVO|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 HVAGDHSR 9
HV DH +
Sbjct: 168 HVVNDHGK 175
>sp|VP24_MABVM|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 HVAGDHSR 9
HV DH +
Sbjct: 168 HVVNDHGK 175
>sp|VP24_MABVA|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 HVAGDHSR 9
HV DH +
Sbjct: 168 HVVNDHGK 175
>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1
Query: 1 KHVAGDHSRV 10
+H+A H+++
Sbjct: 169 RHIASSHNKL 178
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 KHVAGDHSR 9
+HV HSR
Sbjct: 621 RHVQNFHSR 629
>sp|VP16_VZVD|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 KHVAGDH 7
+HV DH
Sbjct: 360 RHVRADH 366
>sp|VP16_VZVO|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 KHVAGDH 7
+HV DH
Sbjct: 360 RHVRADH 366
>sp|NEC2_EBVB9|NUCLEAR egress protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 GDHSRV 10
G HSRV
Sbjct: 286 GSHSRV 291
67|SequenceR|340|331|SCNYPKHVAG
>sp|RDRP_ROTYO|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8])
Query: 2 CNYPK 6
CNYPK
Sbjct: 1056 CNYPK 1060
>sp|RDRP_ROTWI|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 2 CNYPK 6
CNYPK
Sbjct: 1056 CNYPK 1060
>sp|RDRP_ROTHW|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 2 CNYPK 6
CNYPK
Sbjct: 1056 CNYPK 1060
>sp|RDRP_ROTHT|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 2 CNYPK 6
CNYPK
Sbjct: 1056 CNYPK 1060
>sp|RDRP_ROTHS|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4])
Query: 2 CNYPK 6
CNYPK
Sbjct: 1056 CNYPK 1060
>sp|RDRP_ROTHP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 2 CNYPK 6
CNYPK
Sbjct: 1056 CNYPK 1060
>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 2 CNYPK 6
CNYPK
Sbjct: 1056 CNYPK 1060
>sp|RDRP_ROTHK|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 2 CNYPK 6
CNYPK
Sbjct: 1056 CNYPK 1060
>sp|RDRP_ROTHD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 2 CNYPK 6
CNYPK
Sbjct: 1056 CNYPK 1060
>sp|RDRP_ROTH7|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 2 CNYPK 6
CNYPK
Sbjct: 1056 CNYPK 1060
>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 2 CNYPK 6
CNYPK
Sbjct: 1056 CNYPK 1060
>sp|RDRP_ROTH3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 2 CNYPK 6
CNYPK
Sbjct: 1056 CNYPK 1060
>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 2 CNYPK 6
CNYPK
Sbjct: 1056 CNYPK 1060
>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate
Query: 2 CNYPK 6
CNYPK
Sbjct: 1056 CNYPK 1060
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 SCNYPKHV 8
SC P+HV
Sbjct: 2690 SCRVPRHV 2697
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 SCNYPKHV 8
SC P+HV
Sbjct: 2690 SCRVPRHV 2697
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 SCN---YPKHVAG 10
+CN YP HV+G
Sbjct: 304 TCNCSIYPGHVSG 316
>sp|PG037_VACCC|INHIBITOR of Apoptosis OPG037|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 NYPKHVA 9
NYP H+A
Sbjct: 99 NYPLHIA 105
>sp|PG037_VAR67|INHIBITOR of Apoptosis OPG037|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 NYPKHVA 9
NYP H+A
Sbjct: 73 NYPLHIA 79
>sp|PG037_MONPV|INHIBITOR of Apoptosis OPG037|Monkeypox virus (MPXV)
Query: 3 NYPKHVA 9
NYP H+A
Sbjct: 69 NYPLHIA 75
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 CNYPKHVAG 10
CNY VAG
Sbjct: 4415 CNYKAKVAG 4423
>sp|VIF_HV2G1|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 CNYPK 6
CNYP+
Sbjct: 135 CNYPQ 139
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CN---YPKHVAG 10
CN YP HV+G
Sbjct: 304 CNCSIYPGHVSG 315
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CN---YPKHVAG 10
CN YP HV+G
Sbjct: 304 CNCSIYPGHVSG 315
>sp|VIF_HV2RO|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 CNYPK 6
CNYP+
Sbjct: 135 CNYPR 139
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CN---YPKHVAG 10
CN YP HV+G
Sbjct: 304 CNCSIYPGHVSG 315
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CN---YPKHVAG 10
CN YP HV+G
Sbjct: 304 CNCSIYPGHVSG 315
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CN---YPKHVAG 10
CN YP HV+G
Sbjct: 304 CNCSIYPGHVSG 315
>sp|POLG_HCVE0|GENOME polyprotein|Hepatitis C virus (isolate EC10)
Query: 2 CN---YPKHVAG 10
CN YP H+ G
Sbjct: 5 CNCSIYPGHITG 16
>sp|VIF_HV2EH|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 CNYPKHVAG 10
CNYP G
Sbjct: 135 CNYPSAHTG 143
>sp|PG068_VARV|PROTEIN OPG068|Variola virus
Query: 3 NYPKHV 8
N+P+HV
Sbjct: 45 NFPQHV 50
>sp|PG068_VAR67|PROTEIN OPG068|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 NYPKHV 8
N+P+HV
Sbjct: 45 NFPQHV 50
>sp|PG068_VACCC|PROTEIN OPG068|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 NYPKHV 8
N+P+HV
Sbjct: 45 NFPQHV 50
>sp|PG068_MONPV|PROTEIN OPG068|Monkeypox virus (MPXV)
Query: 3 NYPKHV 8
N+P+HV
Sbjct: 45 NFPQHV 50
>sp|VIF_HV2BE|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 CNYPK 6
CNYP+
Sbjct: 135 CNYPQ 139
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 CN---YPKHVAG 10
CN YP HV G
Sbjct: 304 CNCSIYPGHVTG 315
>sp|VIF_HV2SB|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 CNYPK 6
CNYP+
Sbjct: 135 CNYPQ 139
>sp|NEC2_EBVB9|NUCLEAR egress protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SCNYP 5
+CNYP
Sbjct: 71 NCNYP 75
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 4 YPKHVA 9
YP HVA
Sbjct: 893 YPSHVA 898
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 4 YPKHVA 9
YP HVA
Sbjct: 964 YPSHVA 969
>sp|VIF_HV2D1|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 CNYPK 6
CNYP+
Sbjct: 135 CNYPQ 139
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 4 YPKHVA 9
YP HVA
Sbjct: 833 YPSHVA 838
>sp|VIF_HV2ST|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 CNYPK 6
CNYP+
Sbjct: 135 CNYPQ 139
>sp|VIF_HV2KR|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 CNYPK 6
CNYP+
Sbjct: 135 CNYPQ 139
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CN---YPKHVAG 10
CN YP HV G
Sbjct: 304 CNCSIYPGHVTG 315
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CN---YPKHVAG 10
CN YP HV G
Sbjct: 304 CNCSIYPGHVTG 315
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 CN---YPKHVAG 10
CN YP HV G
Sbjct: 304 CNCSIYPGHVTG 315
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 CN---YPKHVAG 10
CN YP HV G
Sbjct: 304 CNCSIYPGHVTG 315
>sp|VIF_HV2D2|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 CNYP 5
CNYP
Sbjct: 135 CNYP 138
>sp|VIF_HV2UC|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 CNYP 5
CNYP
Sbjct: 135 CNYP 138
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 4 YPKHV 8
YPKH+
Sbjct: 943 YPKHI 947
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 4 YPKHV 8
YPKH+
Sbjct: 952 YPKHI 956
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 4 YPKHV 8
YPKH+
Sbjct: 936 YPKHI 940
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 4 YPKHV 8
YPKH+
Sbjct: 939 YPKHI 943
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 4 YPKHV 8
YPKH+
Sbjct: 943 YPKHI 947
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 SCNYPK 6
SC++PK
Sbjct: 717 SCHWPK 722
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 SCNYPK 6
SC++PK
Sbjct: 997 SCHWPK 1002
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 SCNYPK 6
SC++PK
Sbjct: 997 SCHWPK 1002
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 SCNYPK 6
SC++PK
Sbjct: 997 SCHWPK 1002
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 SCNYPK 6
SC++PK
Sbjct: 997 SCHWPK 1002
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 SCNYPK 6
SC++PK
Sbjct: 997 SCHWPK 1002
>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)
Query: 4 YPKHVAG 10
YP HV+G
Sbjct: 309 YPGHVSG 315
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 4 YPKHV 8
YPKH+
Sbjct: 931 YPKHI 935
>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)
Query: 4 YPKHVAG 10
YP HV+G
Sbjct: 309 YPGHVSG 315
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 1 SCNYPKHV 8
SC+Y HV
Sbjct: 1160 SCDYGAHV 1167
>sp|VIF_HV190|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 CNYP 5
CNYP
Sbjct: 133 CNYP 136
>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)
Query: 4 YPKHVAG 10
YP H AG
Sbjct: 737 YPPHAAG 743
>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)
Query: 4 YPKHVAG 10
YP H AG
Sbjct: 737 YPPHAAG 743
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 CN---YPKHVAG 10
CN YP H+ G
Sbjct: 304 CNCSIYPGHITG 315
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CN---YPKHVAG 10
CN YP H+ G
Sbjct: 304 CNCSIYPGHITG 315
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 CN---YPKHVAG 10
CN YP H+ G
Sbjct: 304 CNCSIYPGHITG 315
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 1 SCNYPKHV 8
SCN+ HV
Sbjct: 63 SCNFDLHV 70
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 CNYPKHVAG 10
C KH+AG
Sbjct: 926 CTLVKHLAG 934
>sp|POLG_HCVH7|GENOME polyprotein|Hepatitis C virus (isolate HCT27)
Query: 2 CN---YPKHVAG 10
CN YP H+ G
Sbjct: 176 CNCSIYPGHITG 187
>sp|POLG_HCVTH|GENOME polyprotein|Hepatitis C virus (isolate TH)
Query: 2 CN---YPKHVAG 10
CN YP H+ G
Sbjct: 188 CNCSIYPGHITG 199
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 SCNYPKHV 8
SCN+ HV
Sbjct: 63 SCNFDLHV 70
>sp|YVAI_VACCC|UNCHARACTERIZED 8.2 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 YPKH 7
YPKH
Sbjct: 13 YPKH 16
>sp|SCAF_HHV11|CAPSID scaffolding protein|Human herpesvirus 1 (strain 17)
Query: 1 SCNYPKHVA 9
S +YP HVA
Sbjct: 371 SQHYPPHVA 379
>sp|POLG_HCVH8|GENOME polyprotein|Hepatitis C virus (isolate HCT18)
Query: 4 YPKHVAG 10
YP H+ G
Sbjct: 193 YPGHITG 199
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 4 YPKHVA 9
YP H+A
Sbjct: 969 YPSHLA 974
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 4 YPKHVA 9
YP H+A
Sbjct: 969 YPSHLA 974
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 4 YPKHVAG 10
YP H+ G
Sbjct: 309 YPGHITG 315
>sp|GLYC_LASSJ|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain Mouse/Sierra
Query: 2 CNYPKH 7
CNY K+
Sbjct: 364 CNYSKY 369
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 NYPKHVAG 10
NY HV G
Sbjct: 321 NYVDHVKG 328
>sp|BRRF2_EBVG|TEGUMENT protein BRRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 PKHVAG 10
P+H+AG
Sbjct: 13 PEHLAG 18
>sp|BRRF2_EBVA8|TEGUMENT protein BRRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 PKHVAG 10
P+H+AG
Sbjct: 13 PEHLAG 18
68|SequenceR|345|336|SKGCHSCNYP
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 4 CHSCNY 9
CHSC Y
Sbjct: 2964 CHSCVY 2969
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 2 KGCHSCNYP 10
+ CH N+P
Sbjct: 2114 RQCHGANFP 2122
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 3 GCHSCNY 9
GC+SC+Y
Sbjct: 1157 GCYSCDY 1163
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 2 KGCHSC 7
K CHSC
Sbjct: 470 KCCHSC 475
>sp|UL32_HHV6U|PACKAGING protein UL32|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 CHSCNY 9
C+ CNY
Sbjct: 98 CYKCNY 103
>sp|UL32_HHV6Z|PACKAGING protein UL32 homolog|Human herpesvirus 6B (strain Z29)
Query: 4 CHSCNY 9
C+ CNY
Sbjct: 98 CYKCNY 103
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 4 CHSCNY 9
CH+C Y
Sbjct: 2977 CHTCIY 2982
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 4 CHSCNY 9
CH+C Y
Sbjct: 2978 CHTCIY 2983
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 4 CHSCNY 9
CH+C Y
Sbjct: 2973 CHTCIY 2978
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 4 CHSCNY 9
CH+C Y
Sbjct: 2977 CHTCIY 2982
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 4 CHSCNY 9
CH+C Y
Sbjct: 2976 CHTCIY 2981
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 4 CHSCNY 9
CH+C Y
Sbjct: 2976 CHTCIY 2981
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 4 CHSCNY 9
CH+C Y
Sbjct: 2976 CHTCIY 2981
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 CHSCNY 9
CH+C Y
Sbjct: 2976 CHTCIY 2981
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 4 CHSCNYP 10
C+ NYP
Sbjct: 1963 CYKVNYP 1969
>sp|SODL_VARV|CU-ZN superoxide dismutase-like protein OPG175|Variola virus
Query: 1 SKGCHSCNYP 10
S+GC+S P
Sbjct: 49 SRGCNSIGSP 58
>sp|SODL_VAR67|CU-ZN superoxide dismutase-like protein OPG175|Variola virus (isolate
Query: 1 SKGCHSCNYP 10
S+GC+S P
Sbjct: 49 SRGCNSIGSP 58
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 3 GCHSCN 8
GC+SCN
Sbjct: 1038 GCYSCN 1043
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 3 GCHSCN 8
GC+SCN
Sbjct: 1038 GCYSCN 1043
>sp|UL121_HCMVA|MEMBRANE protein UL121|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SKGCHSCNYP 10
++ C SC +P
Sbjct: 83 TRHCTSCTHP 92
>sp|SODL_CWPXB|CU-ZN superoxide dismutase-like protein OPG175|Cowpox virus (strain
Query: 1 SKGCHSCNYP 10
S+GC S P
Sbjct: 49 SRGCESIGSP 58
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 4 CHSCNYP 10
C+ NYP
Sbjct: 1960 CYKINYP 1966
>sp|E1A_ADE02|EARLY E1A protein|Human adenovirus C serotype 2
Query: 3 GCHSCNY 9
GC SC+Y
Sbjct: 153 GCRSCHY 159
>sp|CEP2_VZVD|CYTOPLASMIC envelopment protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 SKGCHSCNY 9
+ GC CN+
Sbjct: 224 ADGCDECNH 232
>sp|ORF48_HHV8P|TEGUMENT protein ORF48|Human herpesvirus 8 type P
Query: 3 GCHSC 7
GCH C
Sbjct: 120 GCHQC 124
>sp|E1A_ADE05|EARLY E1A protein|Human adenovirus C serotype 5
Query: 3 GCHSCNY 9
GC SC+Y
Sbjct: 153 GCRSCHY 159
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 3 GCHSCNY 9
GC C Y
Sbjct: 542 GCEECRY 548
>sp|SODL_MONPZ|CU-ZN superoxide dismutase-like protein|Monkeypox virus (strain
Query: 1 SKGCHSCNYP 10
S+GC S P
Sbjct: 49 SRGCDSIGSP 58
>sp|SODL_MONPV|CU-ZN superoxide dismutase-like protein OPG175|Monkeypox virus (MPXV)
Query: 1 SKGCHSCNYP 10
S+GC S P
Sbjct: 49 SRGCDSIGSP 58
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 SKGCHSCNY 9
S GC C Y
Sbjct: 1172 SAGCPKCAY 1180
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 SKGCHSCNY 9
S GC C Y
Sbjct: 1172 SAGCPKCAY 1180
Query: 2 KGCHSCNY 9
+GC C Y
Sbjct: 1035 QGCELCRY 1042
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 SKGCHSCNY 9
S GC C Y
Sbjct: 1172 SAGCPKCAY 1180
Query: 2 KGCHSCNY 9
+GC C Y
Sbjct: 1035 QGCELCRY 1042
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 SKGCHSCNY 9
S GC C Y
Sbjct: 1172 SAGCPKCAY 1180
Query: 2 KGCHSCNY 9
+GC C Y
Sbjct: 1035 QGCELCRY 1042
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 SKGCHSCNY 9
S GC C Y
Sbjct: 1172 SAGCPKCAY 1180
Query: 2 KGCHSCNY 9
+GC C Y
Sbjct: 1035 QGCELCRY 1042
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 SKGCHSCNY 9
S GC C Y
Sbjct: 1172 SAGCPKCAY 1180
Query: 2 KGCHSCNY 9
+GC C Y
Sbjct: 1035 QGCELCRY 1042
>sp|POLG_HCVE0|GENOME polyprotein|Hepatitis C virus (isolate EC10)
Query: 1 SKGCHSCNYP 10
++GC+ YP
Sbjct: 2 TQGCNCSIYP 11
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 SKGCHSCNY 9
S GC C Y
Sbjct: 1172 SAGCPKCAY 1180
Query: 2 KGCHSCNY 9
+GC C Y
Sbjct: 1035 QGCELCRY 1042
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 SKGCHSCNY 9
S GC C Y
Sbjct: 1172 SAGCPKCAY 1180
>sp|SODL_VACCD|CU-ZN superoxide dismutase-like protein OPG175|Vaccinia virus (strain
Query: 1 SKGCHSCNYP 10
S+GC S P
Sbjct: 49 SRGCDSIGSP 58
>sp|SODL_CWPXG|CU-ZN superoxide dismutase-like protein|Cowpox virus (strain GRI-90 /
Query: 1 SKGCHSCNYP 10
S+GC S P
Sbjct: 49 SRGCDSIGSP 58
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 5 HSCNYP 10
+SCN P
Sbjct: 999 YSCNLP 1004
>sp|SODL_VACCT|CU-ZN superoxide dismutase-like protein|Vaccinia virus (strain Tian
Query: 1 SKGCHSCNYP 10
S+GC S P
Sbjct: 49 SQGCDSIGSP 58
>sp|SODL_VACCC|CU-ZN superoxide dismutase-like protein OPG175|Vaccinia virus (strain
Query: 1 SKGCHSCNYP 10
S+GC S P
Sbjct: 49 SQGCDSIGSP 58
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 SKGCHSCNY 9
S GC C Y
Sbjct: 1172 SAGCPRCAY 1180
Query: 2 KGCHSCNY 9
+GC C Y
Sbjct: 1035 QGCELCRY 1042
>sp|UL121_HCMVM|MEMBRANE protein UL121|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 CHSCNYP 10
C SC +P
Sbjct: 86 CTSCTHP 92
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 2 KGCHSC 7
+ CH+C
Sbjct: 1198 RSCHAC 1203
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 2 KGCHSC 7
+ CH+C
Sbjct: 1198 RSCHAC 1203
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 5 HSCNY 9
H CNY
Sbjct: 1325 HYCNY 1329
>sp|KBTB2_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 3 GCHSCNY 9
CH NY
Sbjct: 261 ACHDTNY 267
>sp|KBTB2_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 3 GCHSCNY 9
CH NY
Sbjct: 251 ACHDTNY 257
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 1 SKGCHSCNYP 10
S GC + YP
Sbjct: 891 SPGCTTVRYP 900
>sp|TRM3_HCMVM|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 HSCN 8
HSCN
Sbjct: 54 HSCN 57
>sp|TRM3_HCMVA|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 HSCN 8
HSCN
Sbjct: 54 HSCN 57
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 2 KGCHSC 7
+ CH+C
Sbjct: 1198 RSCHAC 1203
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 HSCNY 9
H CNY
Sbjct: 1325 HYCNY 1329
>sp|VE7_HPV52|PROTEIN E7|Human papillomavirus 52
Query: 4 CHSCN 8
CHSC+
Sbjct: 60 CHSCD 64
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 1 SKGCHSCNYP 10
S GC + YP
Sbjct: 891 SPGCTTIRYP 900
>sp|E1A_ADE40|EARLY E1A protein|Human adenovirus F serotype 40
Query: 2 KGCHSCNY 9
+GC +C++
Sbjct: 143 RGCRACDF 150
>sp|SODL_VACCA|CU-ZN superoxide dismutase-like protein|Vaccinia virus (strain Ankara)
Query: 1 SKGCHSCNYP 10
S+GC S P
Sbjct: 45 SQGCDSIGSP 54
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 6 SCNYP 10
SCN+P
Sbjct: 576 SCNFP 580
>sp|E1A_ADE07|EARLY E1A protein|Human adenovirus B serotype 7
Query: 3 GCHSCNY 9
GC SC +
Sbjct: 162 GCKSCEF 168
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 1 SKGCHSCNYP 10
S GC + YP
Sbjct: 883 SAGCKTDRYP 892
>sp|VE7_HPV33|PROTEIN E7|Human papillomavirus 33
Query: 4 CHSCN 8
CH+CN
Sbjct: 58 CHTCN 62
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 1 SKGCHSCNY 9
S GC C Y
Sbjct: 540 SMGCEICKY 548
69|SequenceR|350|341|DPRSFSKGCH
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 RSFSKGCH 10
R F+K CH
Sbjct: 914 RCFTKKCH 921
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 RSFSKGCH 10
R F+K CH
Sbjct: 914 RCFTKKCH 921
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 RSFSKGCH 10
R F+K CH
Sbjct: 914 RCFTKKCH 921
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 PRSFSKGCH 10
P+S + CH
Sbjct: 2694 PQSLVQACH 2702
>sp|FUS_HRSVR|FUSION glycoprotein F0|Human respiratory syncytial virus A
Query: 3 RSFSKGC 9
++FS GC
Sbjct: 433 KTFSNGC 439
>sp|FUS_HRSVB|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 3 RSFSKGC 9
++FS GC
Sbjct: 433 KTFSNGC 439
>sp|FUS_HRSVA|FUSION glycoprotein F0|Human respiratory syncytial virus A
Query: 3 RSFSKGC 9
++FS GC
Sbjct: 433 KTFSNGC 439
>sp|FUS_HRSV1|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 3 RSFSKGC 9
++FS GC
Sbjct: 433 KTFSNGC 439
>sp|FUS_HRSV|FUSION glycoprotein F0|Human respiratory syncytial virus
Query: 3 RSFSKGC 9
++FS GC
Sbjct: 433 KTFSNGC 439
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 2 PRSFSKGCH 10
P+S S GC+
Sbjct: 607 PQSTSPGCY 615
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 4 SFSKGC 9
SFS GC
Sbjct: 540 SFSNGC 545
>sp|VPX_HV2EH|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 5 FSKGC 9
F+KGC
Sbjct: 82 FAKGC 86
70|SequenceR|355|346|HSNLHDPRSF
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 HSNLHD 6
HSNLHD
Sbjct: 2035 HSNLHD 2040
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 4 LHDPRS 9
+HDPRS
Sbjct: 706 IHDPRS 711
>sp|UL95_HHV8P|PROTEIN UL95 homolog|Human herpesvirus 8 type P
Query: 2 SNLHDPR 8
SNLH PR
Sbjct: 72 SNLHLPR 78
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 HSNLHDPR 8
+N+H PR
Sbjct: 3057 QTNMHTPR 3064
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 HSNLHDPR 8
+N+H PR
Sbjct: 3057 QTNMHTPR 3064
>sp|HBEAG_HBVCJ|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 SNLHDPRS 9
SNL DP S
Sbjct: 103 SNLEDPAS 110
>sp|HBEAG_HBVC3|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 SNLHDPRS 9
SNL DP S
Sbjct: 103 SNLEDPAS 110
>sp|HBEAG_HBVC0|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 SNLHDPRS 9
SNL DP S
Sbjct: 103 SNLEDPAS 110
>sp|HBEAG_HBVB4|EXTERNAL core antigen|Hepatitis B virus genotype B/C
Query: 2 SNLHDPRS 9
SNL DP S
Sbjct: 103 SNLEDPAS 110
>sp|HBEAG_HBVB2|EXTERNAL core antigen|Hepatitis B virus genotype B2
Query: 2 SNLHDPRS 9
SNL DP S
Sbjct: 103 SNLEDPAS 110
>sp|HBEAG_HBVC1|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 SNLHDPRS 9
SNL DP S
Sbjct: 103 SNLEDPAS 110
>sp|UL10_HCMVM|UNCHARACTERIZED protein UL10|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HSNLHDPRSF 10
H N+ DPR++
Sbjct: 111 HVNVSDPRNY 120
>sp|NSP1_ROTHL|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 3 NLHDP 7
NLHDP
Sbjct: 235 NLHDP 239
>sp|NCAP_I97A1|NUCLEOPROTEIN A virus (strain A/Hong
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I96A3|NUCLEOPROTEIN A virus (strain A/China:Nanchang/11/1996
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I96A2|NUCLEOPROTEIN A virus (strain A/USA:Memphis/10/1996
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I89A6|NUCLEOPROTEIN A virus (strain A/Swine/Italy/839/1989
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I85A4|NUCLEOPROTEIN A virus (strain A/Swine/Netherlands/12/1985
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I83A2|NUCLEOPROTEIN A virus (strain A/Ohio/4/1983
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I83A1|NUCLEOPROTEIN A virus (strain A/Chile/1/1983
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I81A4|NUCLEOPROTEIN A virus (strain A/Swine/Ontario/2/1981
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I81A0|NUCLEOPROTEIN A virus (strain A/Swine/Germany/2/1981
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I80AA|NUCLEOPROTEIN A virus (strain A/India/6263/1980
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I77AB|NUCLEOPROTEIN A virus (strain A/USSR/90/1977
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I77AA|NUCLEOPROTEIN A virus (strain A/Brazil/11/1978
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I76AA|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I73A5|NUCLEOPROTEIN A virus (strain A/Port
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I73A3|NUCLEOPROTEIN A virus (strain A/Memphis/1/1973
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I73A2|NUCLEOPROTEIN A virus (strain A/Memphis/4/1973
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I72A4|NUCLEOPROTEIN A virus (strain A/Memphis/101/1972
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I72A2|NUCLEOPROTEIN A virus (strain A/Udorn/307/1972
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I71A1|NUCLEOPROTEIN A virus (strain A/Memphis/1/1971
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I68A6|NUCLEOPROTEIN A virus (strain A/Northern
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I68A4|NUCLEOPROTEIN A virus (strain A/Hong
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I68A2|NUCLEOPROTEIN A virus (strain A/Victoria/5/1968
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I67A2|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I61A1|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I60A0|NUCLEOPROTEIN A virus (strain A/Ann
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I57A7|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1957
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I57A5|NUCLEOPROTEIN A virus (strain A/Singapore/1/1957
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I56A3|NUCLEOPROTEIN A virus (strain A/Equine/Prague/1/1956
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I55A0|NUCLEOPROTEIN A virus (strain A/England/19/1955
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I54A2|NUCLEOPROTEIN A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I51A0|NUCLEOPROTEIN A virus (strain A/USA:Albany/12/1951
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I50A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I40A0|NUCLEOPROTEIN A virus (strain A/Hickox/1940
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I07A0|NUCLEOPROTEIN A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I01A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I00A1|NUCLEOPROTEIN A virus (strain A/New
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I82A4|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I81A3|NUCLEOPROTEIN A virus (strain A/Turkey/Minnesota/1661/1981
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I80A1|NUCLEOPROTEIN A virus (strain A/Duck/Australia/749/1980
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I77AC|NUCLEOPROTEIN A virus (strain A/Swine/Tennessee/24/1977
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I76AG|NUCLEOPROTEIN A virus (strain A/Swine/Italy/437/1976
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I76A7|NUCLEOPROTEIN A virus (strain A/New
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I36A0|NUCLEOPROTEIN A virus (strain A/Henry/1936
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I27A0|NUCLEOPROTEIN A virus (strain A/Fowl
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I82A7|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I81A1|NUCLEOPROTEIN A virus (strain A/Swine/Italy/141/1981
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I79A5|NUCLEOPROTEIN A virus (strain A/Swine/Italy/2/1979
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I77A3|NUCLEOPROTEIN A virus (strain A/Duck/Bavaria/2/1977
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I54A1|NUCLEOPROTEIN A virus (strain A/Swine/May/1954
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I35A2|NUCLEOPROTEIN A virus (strain A/Swine/Ohio/23/1935
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I02A7|NUCLEOPROTEIN A virus (strain A/Teal/China/2978.1/2002
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I01A0|NUCLEOPROTEIN A virus (strain A/Silky
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|HBEAG_HBVC7|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 SNLHDPRS 9
SNL DP S
Sbjct: 103 SNLEDPAS 110
>sp|NCAP_I80A5|NUCLEOPROTEIN A virus (strain A/Teal/Iceland/29/1980
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I00A0|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I96A0|NUCLEOPROTEIN A virus (strain A/Goose/Guangdong/1/1996
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I59A0|NUCLEOPROTEIN A virus (strain A/Chicken/Scotland/1959
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I54A0|NUCLEOPROTEIN A virus (strain A/Leningrad/1/1954
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I49A2|NUCLEOPROTEIN A virus (strain A/Swine/41/1949
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I47A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I43A0|NUCLEOPROTEIN A virus (strain A/USA:Iowa/1943
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I42A0|NUCLEOPROTEIN A virus (strain A/Swine/Jamesburg/1942
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I37A0|NUCLEOPROTEIN A virus (strain A/Swine/29/1937
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I18A0|NUCLEOPROTEIN A virus (strain A/Brevig
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I01A1|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I35A3|NUCLEOPROTEIN A virus (strain A/USA:Phila/1935
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|CAPSD_HBVC1|CAPSID protein|Hepatitis B virus genotype C
Query: 2 SNLHDPRS 9
SNL DP S
Sbjct: 74 SNLEDPAS 81
>sp|NCAP_I88A7|NUCLEOPROTEIN A virus (strain A/Wisconsin/3523/1988
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I88A5|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/17672/1988
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I80A2|NUCLEOPROTEIN A virus (strain A/Seal/Massachusetts/1/1980
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I78A3|NUCLEOPROTEIN A virus (strain A/Mallard/New
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I76AF|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1976/1931
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I75A2|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I45A0|NUCLEOPROTEIN A virus (strain A/USA:Huston/AA/1945
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I34A1|NUCLEOPROTEIN A virus (strain A/Puerto
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I30A0|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/15/1930
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I06A0|NUCLEOPROTEIN A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I03A1|NUCLEOPROTEIN A virus (strain A/Chicken/Shantou/4231/2003
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I02A4|NUCLEOPROTEIN A virus (strain A/Silky
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|CAPSD_HBVC9|CAPSID protein|Hepatitis B virus genotype C
Query: 2 SNLHDPRS 9
SNL DP S
Sbjct: 74 SNLEDPAS 81
>sp|NCAP_I77A5|NUCLEOPROTEIN A virus (strain A/Guangdong/38/1977
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I76A6|NUCLEOPROTEIN A virus (strain A/Memphis/110/1976
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I73A4|NUCLEOPROTEIN A virus (strain A/Equine/London/1416/1973
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I46A1|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1946
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I02A6|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I02A5|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I02A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I02A1|NUCLEOPROTEIN A virus (strain A/Guinea
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I01A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|CAPSD_HBVB3|CAPSID protein|Hepatitis B virus genotype B2
Query: 2 SNLHDPRS 9
SNL DP S
Sbjct: 74 SNLEDPAS 81
>sp|NCAP_I90A0|NUCLEOPROTEIN A virus (strain A/Shanghai/6/1990
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I78A8|NUCLEOPROTEIN A virus (strain A/Memphis/18/1978
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I78A7|NUCLEOPROTEIN A virus (strain A/Memphis/2/1978
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I77AH|NUCLEOPROTEIN A virus (strain A/Texas/1/1977
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I75A0|NUCLEOPROTEIN A virus (strain A/Beijing/39/1975
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I05A1|NUCLEOPROTEIN A virus (strain A/Goose/Guangxi/345/2005
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I02A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I89A4|NUCLEOPROTEIN A virus (strain A/Shanghai/16/1989
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I89A3|NUCLEOPROTEIN A virus (strain A/Guangdong/39/1989
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I89A2|NUCLEOPROTEIN A virus (strain A/Beijing/353/1989
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I89A1|NUCLEOPROTEIN A virus (strain A/Beijing/352/1989
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I89A0|NUCLEOPROTEIN A virus (strain A/Beijing/337/1989
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I88A3|NUCLEOPROTEIN A virus (strain A/Memphis/8/1988
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I88A2|NUCLEOPROTEIN A virus (strain A/Memphis/3/1988
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I87A2|NUCLEOPROTEIN A virus (strain A/Guangdong/9/1987
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I87A0|NUCLEOPROTEIN A virus (strain A/Shanghai/11/1987
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I85A0|NUCLEOPROTEIN A virus (strain A/Memphis/14/1985
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I80A3|NUCLEOPROTEIN A virus (strain A/Memphis/5/1980
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I80A0|NUCLEOPROTEIN A virus (strain A/Shanghai/31/1980
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I79A4|NUCLEOPROTEIN A virus (strain A/Kiev/59/1979
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I33A0|NUCLEOPROTEIN A virus (strain A/Wilson-Smith/1933
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I03A0|NUCLEOPROTEIN A virus (strain A/Hong
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|CAPSD_HBVCJ|CAPSID protein|Hepatitis B virus genotype C
Query: 2 SNLHDPRS 9
SNL DP S
Sbjct: 74 SNLEDPAS 81
>sp|CAPSD_HBVC5|CAPSID protein|Hepatitis B virus genotype C
Query: 2 SNLHDPRS 9
SNL DP S
Sbjct: 74 SNLEDPAS 81
>sp|CAPSD_HBVC4|CAPSID protein|Hepatitis B virus genotype C
Query: 2 SNLHDPRS 9
SNL DP S
Sbjct: 74 SNLEDPAS 81
>sp|CAPSD_HBVC3|CAPSID protein|Hepatitis B virus genotype C
Query: 2 SNLHDPRS 9
SNL DP S
Sbjct: 74 SNLEDPAS 81
>sp|CAPSD_HBVC0|CAPSID protein|Hepatitis B virus genotype C
Query: 2 SNLHDPRS 9
SNL DP S
Sbjct: 74 SNLEDPAS 81
>sp|CAPSD_HBVB4|CAPSID protein|Hepatitis B virus genotype B/C
Query: 2 SNLHDPRS 9
SNL DP S
Sbjct: 74 SNLEDPAS 81
>sp|CAPSD_HBVB2|CAPSID protein|Hepatitis B virus genotype B2
Query: 2 SNLHDPRS 9
SNL DP S
Sbjct: 74 SNLEDPAS 81
>sp|NCAP_I77A4|NUCLEOPROTEIN A virus (strain A/Swine/Colorado/1/1977
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 HSNLH 5
HSNLH
Sbjct: 433 HSNLH 437
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 HSNLHDPRS 9
H+NL DP S
Sbjct: 1142 HTNLPDPIS 1150
>sp|NCAP_I83A8|NUCLEOPROTEIN A virus (strain A/Hong
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I80A4|NUCLEOPROTEIN A virus (strain A/Memphis/4/1980
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I78A6|NUCLEOPROTEIN A virus (strain A/California/10/1978
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 HSNLHDPRS 9
H+NL DP S
Sbjct: 1142 HTNLPDPIS 1150
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 HSNLHDPRS 9
H+NL DP S
Sbjct: 1142 HTNLPDPIS 1150
>sp|NCAP_I93A0|NUCLEOPROTEIN A virus (strain A/Kitakyushu/159/1993
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|CAPSD_HBVC7|CAPSID protein|Hepatitis B virus genotype C
Query: 2 SNLHDPRS 9
SNL DP S
Sbjct: 74 SNLEDPAS 81
>sp|NCAP_I86A1|NUCLEOPROTEIN A virus (strain A/Memphis/6/1986
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I83A0|NUCLEOPROTEIN A virus (strain A/Swine/Dandong/9/1983
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|NCAP_I35A1|NUCLEOPROTEIN A virus (strain A/Swine/Cambridge/1/1935
Query: 1 HSNLHD 6
HSNL+D
Sbjct: 140 HSNLND 145
>sp|ETF2_YMTV5|EARLY transcription factor 82 kDa|Yaba monkey tumor virus (strain
Query: 1 HSNLHDP 7
H N+H+P
Sbjct: 44 HLNIHNP 50
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 HSNLHDPR 8
SN+H P+
Sbjct: 3031 QSNVHTPK 3038
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 HSNLHDPR 8
SN+H P+
Sbjct: 3031 QSNVHTPK 3038
>sp|XCORE_HBVC4|PUTATIVE X-Core fused protein|Hepatitis B virus genotype C
Query: 2 SNLHDPRS 9
SNL DP S
Sbjct: 250 SNLEDPAS 257
>sp|UL10_HCMVA|UNCHARACTERIZED protein UL10|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HSNLHDPRSF 10
H N+ DP+++
Sbjct: 111 HVNVSDPKNY 120
>sp|HBEAG_HBVA9|EXTERNAL core antigen|Hepatitis B virus genotype A3
Query: 2 SNLHDPRS 9
+NL DP S
Sbjct: 103 NNLQDPAS 110
>sp|HBEAG_HBVC2|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 SNLHDPRS 9
SNL DP S
Sbjct: 103 SNLADPAS 110
>sp|VL1_HPV50|MAJOR capsid protein L1|Human papillomavirus type 50
Query: 1 HSNLHDPR 8
H N+ DPR
Sbjct: 407 HLNVMDPR 414
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 1 HSNLHDPRS 9
H+NL DP S
Sbjct: 1141 HTNLPDPIS 1149
>sp|CAPSD_HBVC2|CAPSID protein|Hepatitis B virus genotype C
Query: 2 SNLHDPRS 9
SNL DP S
Sbjct: 74 SNLADPAS 81
>sp|HBEAG_HBVD7|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 2 SNLHDPRS 9
+NL DP S
Sbjct: 103 ANLQDPAS 110
>sp|HBEAG_HBVA7|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 2 SNLHDPRS 9
+NL DP S
Sbjct: 103 NNLQDPAS 110
>sp|HBEAG_HBVA2|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 2 SNLHDPRS 9
+NL DP S
Sbjct: 103 NNLQDPAS 110
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 3 NLHDP 7
N+HDP
Sbjct: 837 NMHDP 841
>sp|HBEAG_HBVA4|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 2 SNLHDPRS 9
+NL DP S
Sbjct: 103 NNLEDPAS 110
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 1 HSNLHDP 7
HS H+P
Sbjct: 1821 HSRTHEP 1827
>sp|CAPSD_HBVA9|CAPSID protein|Hepatitis B virus genotype A3
Query: 2 SNLHDPRS 9
+NL DP S
Sbjct: 74 NNLQDPAS 81
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 3 NLHDP 7
N HDP
Sbjct: 1605 NFHDP 1609
>sp|CAPSD_HBVD1|CAPSID protein|Hepatitis B virus genotype D
Query: 2 SNLHDPRS 9
+NL DP S
Sbjct: 74 TNLEDPAS 81
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 3 NLHDP 7
N HDP
Sbjct: 1605 NFHDP 1609
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 3 NLHDP 7
N HDP
Sbjct: 1605 NFHDP 1609
>sp|CAPSD_HBVD4|CAPSID protein|Hepatitis B virus genotype D
Query: 2 SNLHDPRS 9
+NL DP S
Sbjct: 74 TNLEDPAS 81
>sp|HBEAG_HBVB1|EXTERNAL core antigen|Hepatitis B virus genotype B1
Query: 2 SNLHDPRS 9
+NL DP S
Sbjct: 103 NNLEDPAS 110
>sp|HBEAG_HBVA3|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 2 SNLHDPRS 9
+NL DP S
Sbjct: 103 NNLEDPAS 110
>sp|HBEAG_HBVA6|EXTERNAL core antigen|Hepatitis B virus genotype A1
Query: 2 SNLHDPRS 9
+NL DP S
Sbjct: 103 NNLEDPAS 110
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 HSNLHDPR 8
H N DP+
Sbjct: 1331 HDNFKDPQ 1338
>sp|CAPSD_HBVD7|CAPSID protein|Hepatitis B virus genotype D
Query: 2 SNLHDPRS 9
+NL DP S
Sbjct: 74 ANLQDPAS 81
71|SequenceR|360|351|HVQRVHSNLH
>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 VHSNLH 10
VHSNLH
Sbjct: 432 VHSNLH 437
>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)
Query: 5 VHSNLH 10
VHSN+H
Sbjct: 432 VHSNIH 437
>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant
Query: 5 VHSNLH 10
VHSN+H
Sbjct: 432 VHSNIH 437
>sp|M1_INBAC|MATRIX protein 1|Influenza B virus (strain B/Ann
Query: 1 HVQRVHS 7
H QR HS
Sbjct: 157 HSQRAHS 163
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 HVQRVHS 7
HVQ HS
Sbjct: 622 HVQNFHS 628
>sp|RP19_VACCC|DNA-DIRECTED RNA polymerase 19 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 HVQRVHSNL 9
H++ HSNL
Sbjct: 51 HIEDAHSNL 59
>sp|RP19_VACCA|DNA-DIRECTED RNA polymerase 19 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 HVQRVHSNL 9
H++ HSNL
Sbjct: 51 HIEDAHSNL 59
>sp|RP19_MONPV|DNA-DIRECTED RNA polymerase 19 kDa|Monkeypox virus (MPXV)
Query: 1 HVQRVHSNL 9
H++ HSNL
Sbjct: 48 HIEDAHSNL 56
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 QRVHSNL 9
Q+VH NL
Sbjct: 840 QKVHPNL 846
>sp|RP19_VAR67|DNA-DIRECTED RNA polymerase 19 kDa|Variola virus (isolate
Query: 1 HVQRVHSNL 9
H++ HSNL
Sbjct: 51 HIEDAHSNL 59
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 1 HVQRVHSN 8
H Q VH++
Sbjct: 71 HAQEVHND 78
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 3 QRVHSNL 9
Q+VH NL
Sbjct: 840 QKVHPNL 846
>sp|NCAP_I96A3|NUCLEOPROTEIN A virus (strain A/China:Nanchang/11/1996
Query: 1 HVQRVHSNLH 10
H+ HSNL+
Sbjct: 135 HIMIWHSNLN 144
>sp|NCAP_I96A2|NUCLEOPROTEIN A virus (strain A/USA:Memphis/10/1996
Query: 1 HVQRVHSNLH 10
H+ HSNL+
Sbjct: 135 HIMIWHSNLN 144
>sp|NCAP_I88A7|NUCLEOPROTEIN A virus (strain A/Wisconsin/3523/1988
Query: 1 HVQRVHSNLH 10
H+ HSNL+
Sbjct: 135 HIMIWHSNLN 144
>sp|NCAP_I88A5|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/17672/1988
Query: 1 HVQRVHSNLH 10
H+ HSNL+
Sbjct: 135 HIMIWHSNLN 144
>sp|NCAP_I83A1|NUCLEOPROTEIN A virus (strain A/Chile/1/1983
Query: 1 HVQRVHSNLH 10
H+ HSNL+
Sbjct: 135 HIMIWHSNLN 144
>sp|NCAP_I82A7|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 1 HVQRVHSNLH 10
H+ HSNL+
Sbjct: 135 HIMIWHSNLN 144
>sp|NCAP_I81A4|NUCLEOPROTEIN A virus (strain A/Swine/Ontario/2/1981
Query: 1 HVQRVHSNLH 10
H+ HSNL+
Sbjct: 135 HIMIWHSNLN 144
>sp|NCAP_I81A1|NUCLEOPROTEIN A virus (strain A/Swine/Italy/141/1981
Query: 1 HVQRVHSNLH 10
H+ HSNL+
Sbjct: 135 HIMIWHSNLN 144
>sp|NCAP_I79A5|NUCLEOPROTEIN A virus (strain A/Swine/Italy/2/1979
Query: 1 HVQRVHSNLH 10
H+ HSNL+
Sbjct: 135 HIMIWHSNLN 144
>sp|NCAP_I77AC|NUCLEOPROTEIN A virus (strain A/Swine/Tennessee/24/1977
Query: 1 HVQRVHSNLH 10
H+ HSNL+
Sbjct: 135 HIMIWHSNLN 144
>sp|NCAP_I76AG|NUCLEOPROTEIN A virus (strain A/Swine/Italy/437/1976
Query: 1 HVQRVHSNLH 10
H+ HSNL+
Sbjct: 135 HIMIWHSNLN 144
>sp|NCAP_I76A7|NUCLEOPROTEIN A virus (strain A/New
Query: 1 HVQRVHSNLH 10
H+ HSNL+
Sbjct: 135 HIMIWHSNLN 144
>sp|NCAP_I67A2|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 HVQRVHSNLH 10
H+ HSNL+
Sbjct: 135 HIMIWHSNLN 144
>sp|NCAP_I61A1|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 HVQRVHSNLH 10
H+ HSNL+
Sbjct: 135 HIMIWHSNLN 144
>sp|NCAP_I57A7|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1957
Query: 1 HVQRVHSNLH 10
H+ HSNL+
Sbjct: 135 HIMIWHSNLN 144
>sp|NCAP_I54A1|NUCLEOPROTEIN A virus (strain A/Swine/May/1954
Query: 1 HVQRVHSNLH 10
H+ HSNL+
Sbjct: 135 HIMIWHSNLN 144
>sp|NCAP_I47A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 1 HVQRVHSNLH 10
H+ HSNL+
Sbjct: 135 HIMIWHSNLN 144
>sp|NCAP_I37A0|NUCLEOPROTEIN A virus (strain A/Swine/29/1937
Query: 1 HVQRVHSNLH 10
H+ HSNL+
Sbjct: 135 HIMIWHSNLN 144
>sp|NCAP_I35A2|NUCLEOPROTEIN A virus (strain A/Swine/Ohio/23/1935
Query: 1 HVQRVHSNLH 10
H+ HSNL+
Sbjct: 135 HIMIWHSNLN 144
>sp|NCAP_I07A0|NUCLEOPROTEIN A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 HVQRVHSNLH 10
H+ HSNL+
Sbjct: 135 HIMIWHSNLN 144
>sp|NCAP_I00A1|NUCLEOPROTEIN A virus (strain A/New
Query: 1 HVQRVHSNLH 10
H+ HSNL+
Sbjct: 135 HIMIWHSNLN 144
72|SequenceR|365|356|PRETSHVQRV
>sp|UL35_HCMVM|TEGUMENT protein UL35|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 ETSHVQRV 10
ET H+QR+
Sbjct: 438 ETYHLQRI 445
>sp|UL35_HCMVA|PROTEIN UL35|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 ETSHVQRV 10
ET H+QR+
Sbjct: 438 ETYHLQRI 445
>sp|TEG7_VZVO|TEGUMENT protein UL51 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 PRETSHVQR 9
P++T VQR
Sbjct: 238 PKQTQDVQR 246
>sp|TEG7_VZVD|TEGUMENT protein UL51 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PRETSHVQR 9
P++T VQR
Sbjct: 238 PKQTQDVQR 246
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 2 RETSHVQ 8
+ET HVQ
Sbjct: 548 KETFHVQ 554
>sp|NCAP_ISFV|NUCLEOPROTEIN virus (ISFV)
Query: 5 SHVQRV 10
SHVQ+V
Sbjct: 233 SHVQKV 238
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 TSHVQRV 10
T+H QRV
Sbjct: 260 TTHFQRV 266
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 TSHVQRV 10
T+H QRV
Sbjct: 260 TTHFQRV 266
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 2 RETSHVQR 9
R+TSH+ +
Sbjct: 566 RDTSHISQ 573
73|SequenceR|370|361|KECKFPRETS
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 CKFPRET 9
C FP ET
Sbjct: 153 CNFPAET 159
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 CKFPRET 9
C FP ET
Sbjct: 153 CNFPAET 159
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 CKFPRET 9
C FP ET
Sbjct: 153 CNFPAET 159
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 CKFPRET 9
C FP ET
Sbjct: 153 CNFPAET 159
>sp|ENV_HTL1A|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 KECKFPRETS 10
++C+FP T+
Sbjct: 398 EQCRFPNITN 407
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 KECKFPR 7
++CK P+
Sbjct: 42 RQCKLPK 48
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96)
Query: 1 KECKFPR 7
++CK P+
Sbjct: 42 RQCKLPK 48
>sp|VIF_HV2NZ|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 3 CKFPR 7
CK+PR
Sbjct: 135 CKYPR 139
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 CKFP 6
CKFP
Sbjct: 2284 CKFP 2287
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 KECKFPR 7
K+C+ PR
Sbjct: 402 KQCRAPR 408
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 KECKFPR 7
K+C+ PR
Sbjct: 401 KQCRAPR 407
>sp|GC_HHV2H|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain HG52)
Query: 3 CKFPRET 9
C+FP T
Sbjct: 113 CRFPNST 119
>sp|GC_HHV23|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain 333)
Query: 3 CKFPRET 9
C+FP T
Sbjct: 113 CRFPNST 119
>sp|GC_HHV2G|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain G)
Query: 3 CKFPRET 9
C+FP T
Sbjct: 112 CRFPNST 118
>sp|VIF_HV2CA|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 3 CKFPR 7
CK+PR
Sbjct: 135 CKYPR 139
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 KECKFP 6
+EC FP
Sbjct: 808 RECYFP 813
>sp|ORF4_HHV8P|COMPLEMENT control protein|Human herpesvirus 8 type P
Query: 3 CKFPRET 9
CKFP T
Sbjct: 212 CKFPSVT 218
74|SequenceR|375|366|FAAECKECKF
>sp|NSP5_ROTHJ|NON-STRUCTURAL protein 5|Rotavirus A (strain RVA/Human/Japan/K8/1977/G1P3A[9])
Query: 3 AECKECKF 10
+CK CK+
Sbjct: 169 GKCKNCKY 176
>sp|NSP5_ROTH7|NON-STRUCTURAL protein 5|Rotavirus A (isolate RVA/Human/United
Query: 3 AECKECKF 10
+CK CK+
Sbjct: 169 GKCKNCKY 176
>sp|NSP5_ROTH3|NON-STRUCTURAL protein 5|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 3 AECKECKF 10
+CK CK+
Sbjct: 169 GKCKNCKY 176
>sp|NSP5_ROT41|NON-STRUCTURAL protein 5|Rotavirus A (isolate
Query: 3 AECKECKF 10
+CK CK+
Sbjct: 169 GKCKNCKY 176
>sp|E1A_ADE07|EARLY E1A protein|Human adenovirus B serotype 7
Query: 5 CKECKF 10
CK C+F
Sbjct: 163 CKSCEF 168
>sp|E1A_ADE04|EARLY E1A protein|Human adenovirus E serotype 4
Query: 5 CKECKF 10
CK C+F
Sbjct: 158 CKSCEF 163
>sp|E3GL_ADE05|EARLY E3 18.5 kDa glycoprotein|Human adenovirus C serotype 5
Query: 1 FAAECKEC 8
FAAE EC
Sbjct: 33 FAAEANEC 40
>sp|NP1_HBOC3|NON-STRUCTURAL protein NP-1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 2 AAECKECKF 10
A++C+ C +
Sbjct: 171 ASDCERCNY 179
>sp|PG037_MONPV|INHIBITOR of Apoptosis OPG037|Monkeypox virus (MPXV)
Query: 5 CKECKF 10
CK C++
Sbjct: 412 CKNCRY 417
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 4 ECKECK 9
ECK+C+
Sbjct: 303 ECKKCQ 308
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 4 ECKECK 9
ECK+C+
Sbjct: 303 ECKKCQ 308
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 4 ECKEC 8
ECK C
Sbjct: 1649 ECKHC 1653
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 5 CKECKF 10
C+EC++
Sbjct: 543 CEECRY 548
75|SequenceR|380|371|RDKTAFAAEC
>sp|VU54_HHV6Z|PROTEIN U54|Human herpesvirus 6B (strain Z29)
Query: 1 RDKTAFAA 8
RD+++FAA
Sbjct: 49 RDESSFAA 56
>sp|DUSP_VARV|DUAL specificity protein phosphatase H1|Variola virus
Query: 2 DKTAFAAEC 10
D TAF ++C
Sbjct: 91 DVTAFLSKC 99
>sp|DUSP_VAR67|DUAL specificity protein phosphatase OPG106|Variola virus (isolate
Query: 2 DKTAFAAEC 10
D TAF ++C
Sbjct: 91 DVTAFLSKC 99
>sp|DUSP_VACCC|DUAL specificity protein phosphatase OPG106|Vaccinia virus (strain
Query: 2 DKTAFAAEC 10
D TAF ++C
Sbjct: 91 DVTAFLSKC 99
>sp|DUSP_MONPV|DUAL specificity protein phosphatase OPG106|Monkeypox virus (MPXV)
Query: 2 DKTAFAAEC 10
D TAF ++C
Sbjct: 91 DVTAFLSKC 99
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 1 RDKTAF 6
RDKT+F
Sbjct: 128 RDKTSF 133
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 RDKTAF 6
RDKT+F
Sbjct: 128 RDKTSF 133
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 RDKTAF 6
RDKT+F
Sbjct: 128 RDKTSF 133
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 1 RDKTAF 6
RDKT+F
Sbjct: 128 RDKTSF 133
76|SequenceR|385|376|THARLRDKTA
>sp|IL1BP_VACCA|INTERLEUKIN-1-BINDING protein|Vaccinia virus (strain Ankara) (VACV)
Query: 2 HARLRDK 8
H RLR+K
Sbjct: 163 HRRLRNK 169
>sp|IL1BP_CWPXB|INTERLEUKIN-1-BINDING protein|Cowpox virus (strain Brighton Red)
Query: 2 HARLRDK 8
H RLR+K
Sbjct: 163 HRRLRNK 169
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 1 THARLRDK 8
TH ++ DK
Sbjct: 351 THVKINDK 358
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 THARLRDK 8
TH ++ DK
Sbjct: 351 THVKINDK 358
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 THARLRDK 8
TH ++ DK
Sbjct: 351 THVKINDK 358
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 THARLRDK 8
TH ++ DK
Sbjct: 351 THVKINDK 358
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 THARLRDK 8
TH ++ DK
Sbjct: 351 THVKINDK 358
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 THARLRDK 8
TH ++ DK
Sbjct: 351 THVKINDK 358
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 THARLRDK 8
TH ++ DK
Sbjct: 351 THVKINDK 358
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 THARLRDK 8
TH ++ DK
Sbjct: 351 THVKINDK 358
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 THARLRDK 8
TH ++ DK
Sbjct: 351 THVKINDK 358
77|SequenceR|390|381|EEHRVTHARL
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 HRVTHAR 9
H V+HAR
Sbjct: 3004 HSVSHAR 3010
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 HRVTHAR 9
H V+HAR
Sbjct: 2993 HSVSHAR 2999
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 HRVTHAR 9
H V+HAR
Sbjct: 3004 HSVSHAR 3010
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 HRVTHAR 9
H V+HAR
Sbjct: 2982 HSVSHAR 2988
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 HRVTHAR 9
H V+HAR
Sbjct: 2982 HSVSHAR 2988
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 HRVTHAR 9
H V+HAR
Sbjct: 2982 HSVSHAR 2988
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 HRVTHAR 9
H V+HAR
Sbjct: 2982 HSVSHAR 2988
>sp|LAP_YLDV|E3 ubiquitin-protein ligase LAP|Yaba-like disease virus (YLDV)
Query: 1 EEHRVTHAR 9
EE++V H +
Sbjct: 23 EEYKVVHIK 31
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 3 HRVTH 7
HR+TH
Sbjct: 1385 HRLTH 1389
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 3 HRVTH 7
HR+TH
Sbjct: 1385 HRLTH 1389
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 3 HRVTH 7
HR+TH
Sbjct: 1385 HRLTH 1389
78|SequenceR|395|386|HCPVKEEHRV
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PVKEEH 8
P+KEEH
Sbjct: 375 PLKEEH 380
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PVKEEH 8
P+KEEH
Sbjct: 375 PLKEEH 380
>sp|NEC2_HHV7J|NUCLEAR egress protein 2|Human herpesvirus 7 (strain JI)
Query: 1 HCPVKEEHR 9
H P+K+E +
Sbjct: 87 HAPIKQESQ 95
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 CPVKEEHR 9
C VK+E R
Sbjct: 1751 CGVKQEQR 1758
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 CPVKEEHR 9
C VK+E R
Sbjct: 1751 CGVKQEQR 1758
>sp|V30K_HCMVE|30 kDa major early protein|Human cytomegalovirus (strain Eisenhardt)
Query: 1 HCPVKEEHRV 10
H PV + H++
Sbjct: 183 HEPVNQRHKI 192
>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 PVKEEHR 9
P KEE+R
Sbjct: 478 PFKEENR 484
>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 PVKEEHR 9
P KEE+R
Sbjct: 478 PFKEENR 484
>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)
Query: 3 PVKEEHR 9
P KEE+R
Sbjct: 478 PFKEENR 484
>sp|NSP1B_ROTGA|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate
Query: 2 CPVKEEH 8
CP+ EH
Sbjct: 64 CPLNHEH 70
>sp|VP22_HCMVM|TEGUMENT protein UL24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CPVKEEHR 9
CP +HR
Sbjct: 351 CPKGRQHR 358
>sp|VP22_HCMVA|PROTEIN UL24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CPVKEEHR 9
CP +HR
Sbjct: 351 CPKGRQHR 358
79|SequenceR|400|391|MKGCVHCPVK
>sp|E3145_ADE07|EARLY E3 15.3 kDa protein|Human adenovirus B serotype 7
Query: 2 KGCVHC 7
KGC+HC
Sbjct: 105 KGCIHC 110
>sp|VE7_HPV36|PROTEIN E7|Human papillomavirus 36
Query: 3 GCVHCPVK 10
GC HC VK
Sbjct: 56 GCSHCEVK 63
>sp|VU2_HHV6Z|PROTEIN U2|Human herpesvirus 6B (strain Z29)
Query: 4 CVHCPV 9
CVH PV
Sbjct: 311 CVHAPV 316
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 3 GCVHC 7
GC HC
Sbjct: 138 GCYHC 142
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 GCVHC 7
GC HC
Sbjct: 138 GCYHC 142
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 GCVHC 7
GC HC
Sbjct: 138 GCYHC 142
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 3 GCVHC 7
GC HC
Sbjct: 138 GCYHC 142
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 3 GCVHC 7
GC HC
Sbjct: 138 GCYHC 142
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 4 CVHCP 8
C++CP
Sbjct: 1008 CIYCP 1012
>sp|VE7_HPV5B|PROTEIN E7|Human papillomavirus type 5b
Query: 3 GCVHCPVK 10
GC HC VK
Sbjct: 57 GCRHCEVK 64
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 KGCVHCP 8
KGC H P
Sbjct: 2764 KGCRHGP 2770
>sp|VU1_HHV6U|PROTEIN U1|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 CVHCPV 9
CVH PV
Sbjct: 311 CVHAPV 316
>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 4 CVHCP 8
CV CP
Sbjct: 482 CVRCP 486
>sp|E3145_ADE05|EARLY E3 14.5 kDa protein|Human adenovirus C serotype 5
Query: 2 KGCVHCPVK 10
+GC+H P +
Sbjct: 98 EGCIHSPCQ 106
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 4 CVHCP 8
CV CP
Sbjct: 463 CVKCP 467
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 5 VHCP 8
VHCP
Sbjct: 1133 VHCP 1136
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 5 VHCP 8
VHCP
Sbjct: 1133 VHCP 1136
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 VHCP 8
VHCP
Sbjct: 1133 VHCP 1136
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 VHCP 8
VHCP
Sbjct: 1133 VHCP 1136
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 VHCP 8
VHCP
Sbjct: 1133 VHCP 1136
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 VHCP 8
VHCP
Sbjct: 1133 VHCP 1136
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 VHCP 8
VHCP
Sbjct: 1133 VHCP 1136
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 1 MKGCVHC 7
+KGCV C
Sbjct: 903 LKGCVGC 909
>sp|IL18B_MONPV|INTERLEUKIN-18-BINDING protein|Monkeypox virus (MPXV)
Query: 1 MKGCVH 6
M GCVH
Sbjct: 10 MYGCVH 15
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 GCVHC 7
GCV C
Sbjct: 902 GCVEC 906
>sp|E3145_ADE03|EARLY E3 15.3 kDa protein|Human adenovirus B serotype 3
Query: 2 KGCVHC 7
KGC+ C
Sbjct: 106 KGCIQC 111
>sp|E3145_ADE06|EARLY E3B 14 kDa protein|Human adenovirus C serotype 6
Query: 2 KGCVHCPVK 10
+GC+H P +
Sbjct: 98 EGCLHFPYQ 106
>sp|E3145_ADE02|EARLY 3 14.7 kDa protein|Human adenovirus C serotype 2
Query: 2 KGCVHCPVK 10
+GC+H P +
Sbjct: 98 EGCLHFPYQ 106
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 3 GCVHCPV 9
CV CP+
Sbjct: 929 ACVACPL 935
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 3 GCVHCPV 9
CV CP+
Sbjct: 929 ACVACPL 935
>sp|IL10H_HCMVM|VIRAL interleukin-10 homolog|Human cytomegalovirus (strain Merlin)
Query: 1 MKGCVHCPV 9
+KGC C V
Sbjct: 76 VKGCWGCSV 84
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 3 GCVHC 7
GCV C
Sbjct: 579 GCVEC 583
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 3 GCVHCPV 9
CV CP+
Sbjct: 929 ACVACPL 935
>sp|IL10H_HCMVA|VIRAL interleukin-10 homolog|Human cytomegalovirus (strain AD169)
Query: 1 MKGCVHCPV 9
+KGC C V
Sbjct: 75 VKGCWGCSV 83
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 3 GCVHCPV 9
CV CP+
Sbjct: 929 ACVACPL 935
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 3 GCVHCPV 9
CV CP+
Sbjct: 929 ACVACPL 935
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 4 CVHCPV 9
CV CP+
Sbjct: 930 CVACPL 935
>sp|US23_HCMVM|PROTEIN US23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 GCVH 6
GCVH
Sbjct: 339 GCVH 342
>sp|US23_HCMVA|TEGUMENT protein US23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 GCVH 6
GCVH
Sbjct: 339 GCVH 342
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 4 CVHCPV 9
C HC V
Sbjct: 1650 CKHCSV 1655
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 3 GCVH 6
GCVH
Sbjct: 645 GCVH 648
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 3 GCVH 6
GCVH
Sbjct: 645 GCVH 648
>sp|GLYCO_ISFV|GLYCOPROTEIN virus (ISFV)
Query: 1 MKGCVHCP 8
+KG +CP
Sbjct: 38 LKGTRYCP 45
80|SequenceR|405|396|YASSLMKGCV
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 1 YASSLMKGCV 10
+ SSL+ CV
Sbjct: 1085 FTSSLLHSCV 1094
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 YASSLMKGC 9
YA+ L K C
Sbjct: 96 YATKLKKNC 104
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 YASSLMKGC 9
YA+ L K C
Sbjct: 96 YATKLKKNC 104
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 YASSLMKGC 9
YA+ L K C
Sbjct: 96 YATKLKKNC 104
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 YASSLMKGC 9
YA+ L K C
Sbjct: 96 YAAKLKKNC 104
81|SequenceR|410|401|MHDSIYASSL
>sp|NCAP_CCHFV|NUCLEOPROTEIN hemorrhagic fever virus (isolate
Query: 3 DSIYASSL 10
DSIYAS+L
Sbjct: 60 DSIYASAL 67
>sp|NCAP_CCHFI|NUCLEOPROTEIN hemorrhagic fever virus (strain
Query: 3 DSIYASSL 10
DSIYAS+L
Sbjct: 60 DSIYASAL 67
>sp|VE6_HPV39|PROTEIN E6|Human papillomavirus 39
Query: 3 DSIYASSL 10
DS+YA++L
Sbjct: 83 DSVYATTL 90
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 2 HDSIYASS 9
HD +YA++
Sbjct: 761 HDPVYAAA 768
>sp|VE8E2_HPV04|PROTEIN E8^E2C|Human papillomavirus 4
Query: 1 MHDSIYASSL 10
+H S Y+SS
Sbjct: 7 LHSSTYSSSF 16
>sp|NSS_UUKS|NON-STRUCTURAL protein NS-S|Uukuniemi virus (strain S23) (UUKV)
Query: 2 HDSIYAS 8
HD IY S
Sbjct: 20 HDKIYDS 26
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 1 MHDSIY 6
+HDSI+
Sbjct: 217 LHDSIF 222
82|SequenceR|415|406|QSHVKMHDSI
>sp|US10_CHV1|VIRION protein US10 homolog|Cercopithecine herpesvirus 1 (CeHV-1) (Simian
Query: 1 QSHVKMHD 8
Q+H MHD
Sbjct: 155 QTHQHMHD 162
>sp|US10_HHV11|VIRION protein US10|Human herpesvirus 1 (strain 17)
Query: 1 QSHVKMHD 8
Q+H MHD
Sbjct: 259 QTHRHMHD 266
>sp|US10_HHV1F|VIRION protein US10|Human herpesvirus 1 (strain F)
Query: 1 QSHVKMHD 8
Q+H MHD
Sbjct: 250 QTHRHMHD 257
>sp|US10_HHV2H|VIRION protein US10|Human herpesvirus 2 (strain HG52)
Query: 1 QSHVKMHD 8
Q+H MHD
Sbjct: 243 QTHRHMHD 250
>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 QSHVKMHDSI 10
Q+ VK HD+I
Sbjct: 360 QAIVKNHDNI 369
>sp|PRO_HTLV2|GAG-PRO polyprotein|Human T-cell leukemia virus 2
Query: 4 VKMHDSI 10
VK+HD++
Sbjct: 495 VKLHDTL 501
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 5 KMHDSI 10
+MHDSI
Sbjct: 880 EMHDSI 885
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 4 VKMHDSI 10
VK+HD++
Sbjct: 495 VKLHDTL 501
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 5 KMHDSI 10
+MHDSI
Sbjct: 880 EMHDSI 885
83|SequenceR|420|411|VHHPGQSHVK
>sp|UNG_HHV2H|URACIL-DNA glycosylase|Human herpesvirus 2 (strain HG52)
Query: 2 HHPGQSH 8
HHPGQ+H
Sbjct: 102 HHPGQAH 108
>sp|UNG_HHV23|URACIL-DNA glycosylase|Human herpesvirus 2 (strain 333)
Query: 2 HHPGQSH 8
HHPGQ+H
Sbjct: 142 HHPGQAH 148
>sp|PG143_VACCC|VIRION membrane protein OPG143|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VHHPGQSHVK 10
VHHPG+ VK
Sbjct: 326 VHHPGEPVVK 335
>sp|A16_VACCT|VIRION membrane protein A16|Vaccinia virus (strain Tian Tan)
Query: 1 VHHPGQSHVK 10
VHHPG+ VK
Sbjct: 326 VHHPGEPVVK 335
>sp|UNG_HHV11|URACIL-DNA glycosylase|Human herpesvirus 1 (strain 17)
Query: 2 HHPGQSH 8
HHPGQ+H
Sbjct: 181 HHPGQAH 187
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 HPGQSHVK 10
HP +SHVK
Sbjct: 420 HPFKSHVK 427
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 HPGQSHVK 10
HP +SHVK
Sbjct: 420 HPFKSHVK 427
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 HPGQSHVK 10
HP +SHVK
Sbjct: 420 HPFKSHVK 427
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 HPGQSHVK 10
HP +SHVK
Sbjct: 420 HPFKSHVK 427
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 HPGQSHVK 10
HP +SHVK
Sbjct: 420 HPFKSHVK 427
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 VHHPGQSH 8
+H PGQ H
Sbjct: 353 MHIPGQVH 360
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 VHHPGQS 7
VHH G+S
Sbjct: 216 VHHHGES 222
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 3 HPGQS 7
HPGQS
Sbjct: 215 HPGQS 219
>sp|VE2_HPV26|REGULATORY protein E2|Human papillomavirus type 26
Query: 2 HHPGQ 6
HHPG+
Sbjct: 285 HHPGR 289
>sp|TRM3_HCMVM|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 HHPGQSHVK 10
H P Q+H++
Sbjct: 565 HTPDQNHIE 573
>sp|TRM3_HCMVA|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 HHPGQSHVK 10
H P Q+H++
Sbjct: 565 HTPDQNHIE 573
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 HPGQSH 8
H GQ+H
Sbjct: 146 HSGQTH 151
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 VHHPGQSHVK 10
+ H G+SH++
Sbjct: 214 IPHHGESHLE 223
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 2 HHPGQSHVK 10
+HP ++H++
Sbjct: 409 NHPFKNHIR 417
>sp|TEG7_HHV2H|TEGUMENT protein UL51|Human herpesvirus 2 (strain HG52)
Query: 2 HHPG 5
HHPG
Sbjct: 89 HHPG 92
>sp|BEL2_SFV3L|PROTEIN Bel-2|Simian foamy virus type 3
Query: 2 HHPG 5
HHPG
Sbjct: 321 HHPG 324
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 1 VHHPGQSH 8
VH PG S+
Sbjct: 1401 VHSPGVSN 1408
84|SequenceR|425|416|NCLECVHHPG
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 LECVHHP 9
L C HHP
Sbjct: 1789 LTCPHHP 1795
>sp|ETF2_MCV1|EARLY transcription factor 82 kDa|Molluscum contagiosum virus subtype 1
Query: 3 LECVHH 8
+ CVHH
Sbjct: 452 ISCVHH 457
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 5 CVHHPG 10
C+H PG
Sbjct: 356 CIHIPG 361
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 5 CVHHPG 10
C+H PG
Sbjct: 356 CIHIPG 361
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 5 CVHHPG 10
C+H PG
Sbjct: 356 CIHIPG 361
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 3 LECVHHP 9
L C+H P
Sbjct: 968 LRCIHGP 974
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 LECVHHP 9
L CV HP
Sbjct: 880 LTCVFHP 886
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 3 LECVHHP 9
L C+H P
Sbjct: 969 LRCIHGP 975
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 1 NCLECVH 7
NCL C H
Sbjct: 689 NCLLCYH 695
Query: 5 CVHHPG 10
C+H PG
Sbjct: 557 CIHAPG 562
>sp|SCAF_HCMVM|CAPSID scaffolding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CLECVHHP 9
CL CV P
Sbjct: 84 CLGCVTSP 91
>sp|SCAF_HCMVA|CAPSID scaffolding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CLECVHHP 9
CL CV P
Sbjct: 84 CLGCVTSP 91
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 2 CLECVH 7
CL+C H
Sbjct: 948 CLQCPH 953
>sp|PG079_MONPV|PROTEIN OPG079|Monkeypox virus (MPXV)
Query: 2 CLECV 6
C+ECV
Sbjct: 42 CIECV 46
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 CLECVHH 8
C E +HH
Sbjct: 2041 CKELIHH 2047
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 CLECVHH 8
C E +HH
Sbjct: 2041 CKELIHH 2047
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 CLECVHH 8
C E +HH
Sbjct: 2041 CKELIHH 2047
>sp|VE2_HPV44|REGULATORY protein E2|Human papillomavirus 44
Query: 1 NCLECVHH 8
NCL+C+ +
Sbjct: 305 NCLKCLRY 312
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 2 CLECVHHP 9
C+E +H P
Sbjct: 2024 CMELLHLP 2031
>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5
Query: 3 LECVHHPG 10
L VHHP
Sbjct: 437 LASVHHPA 444
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 4 ECVHHPG 10
ECV H G
Sbjct: 1433 ECVTHNG 1439
>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2
Query: 3 LECVHHPG 10
L VHHP
Sbjct: 437 LASVHHPA 444
>sp|VE2_HPV55|REGULATORY protein E2|Human papillomavirus type 55
Query: 1 NCLECVHH 8
NCL+C+ +
Sbjct: 305 NCLKCLRY 312
>sp|VP3_ROTHC|PROTEIN VP3|Rotavirus C (isolate RVC/Human/United Kingdom/Bristol/1989)
Query: 5 CVHHP 9
CVH P
Sbjct: 401 CVHSP 405
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 5 CVHHP 9
CV HP
Sbjct: 340 CVSHP 344
Query: 2 CLECVHHPG 10
CL + +PG
Sbjct: 68 CLAALRYPG 76
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 5 CVHHP 9
CV HP
Sbjct: 337 CVSHP 341
Query: 2 CLECVHHPG 10
CL + +PG
Sbjct: 65 CLAALRYPG 73
>sp|VE2_HPV69|REGULATORY protein E2|Human papillomavirus 69
Query: 1 NCLECVHH 8
NCL+C+ +
Sbjct: 302 NCLKCLRY 309
>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32
Query: 1 NCLECV 6
NCL+C+
Sbjct: 318 NCLKCL 323
>sp|UL13_VZVO|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 5 CVHHP 9
CV+HP
Sbjct: 49 CVNHP 53
>sp|UL13_VZVD|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 CVHHP 9
CV+HP
Sbjct: 49 CVNHP 53
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 LECVHHP 9
L CV HP
Sbjct: 876 LTCVLHP 882
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LECVHHP 9
L CV HP
Sbjct: 876 LACVVHP 882
>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2
Query: 3 LECVHH 8
++C HH
Sbjct: 708 VDCAHH 713
>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1
Query: 3 LECVHH 8
++C HH
Sbjct: 706 VDCAHH 711
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 LECVHHPG 10
L CV HP
Sbjct: 876 LTCVVHPA 883
>sp|PG067_MONPV|PROTEIN OPG067|Monkeypox virus (MPXV)
Query: 3 LECVHH 8
+EC+ H
Sbjct: 126 IECIQH 131
>sp|NSP1_ROTHW|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 1 NCLECVHHP 9
N LE +H+P
Sbjct: 231 NVLENLHNP 239
>sp|RIR2_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Oka
Query: 2 CLECVH 7
C+E VH
Sbjct: 94 CIEVVH 99
>sp|RIR2_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Dumas)
Query: 2 CLECVH 7
C+E VH
Sbjct: 94 CIEVVH 99
>sp|E1A_ADE12|EARLY E1A protein|Human adenovirus A serotype 12
Query: 1 NCLECVHH 8
NC C HH
Sbjct: 158 NCKSCEHH 165
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 NCLECVHH 8
+C EC ++
Sbjct: 919 DCTECTYY 926
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 CLECVHHP 9
CLE HP
Sbjct: 86 CLEIGAHP 93
>sp|RIR2_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain 17)
Query: 2 CLECVH 7
C+E VH
Sbjct: 122 CIEVVH 127
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 CLECVHHP 9
CLE HP
Sbjct: 86 CLEIGAHP 93
>sp|RIR2_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain HG52)
Query: 2 CLECVH 7
C+E VH
Sbjct: 119 CIEVVH 124
>sp|RIR2_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain 333)
Query: 2 CLECVH 7
C+E VH
Sbjct: 119 CIEVVH 124
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 CLECVHHP 9
CLE HP
Sbjct: 86 CLEVGAHP 93
>sp|VB18_VARV|ANKYRIN repeat protein B18|Variola virus
Query: 2 CLECVHHPG 10
CL V+ PG
Sbjct: 178 CLAHVYKPG 186
>sp|VB18_VAR67|ANKYRIN repeat protein B18|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 CLECVHHPG 10
CL V+ PG
Sbjct: 178 CLAHVYKPG 186
>sp|VB18_VACCC|ANKYRIN repeat protein B18|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CLECVHHPG 10
CL V+ PG
Sbjct: 178 CLAHVYKPG 186
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 CLECVHHP 9
CLE HP
Sbjct: 86 CLEVGAHP 93
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 CLECVHHP 9
CLE HP
Sbjct: 86 CLEIGAHP 93
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 CLECVHHP 9
CLE HP
Sbjct: 86 CLEIGAHP 93
>sp|NSP1_ROTWI|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 1 NCLECVHHP 9
N LE +H+P
Sbjct: 231 NVLENLHNP 239
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 LECVHHP 9
L CV HP
Sbjct: 876 LMCVLHP 882
>sp|NCAP_MACHU|NUCLEOPROTEIN virus (MACV)
Query: 5 CVHHPG 10
C HH G
Sbjct: 497 CKHHNG 502
>sp|NCAP_JUNIN|NUCLEOPROTEIN mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 5 CVHHPG 10
C HH G
Sbjct: 497 CKHHNG 502
>sp|VB18_VACCA|ANKYRIN repeat protein B18|Vaccinia virus (strain Ankara) (VACV)
Query: 2 CLECVHHPG 10
CL V+ PG
Sbjct: 178 CLAHVYKPG 186
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 CLECVHH 8
CL+ HH
Sbjct: 2631 CLKLSHH 2637
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 CLECVHHP 9
CLE HP
Sbjct: 86 CLEIGAHP 93
>sp|DNB2_ADE04|DNA-BINDING protein|Human adenovirus E serotype 4
Query: 4 ECVHHPG 10
+C H PG
Sbjct: 377 DCNHKPG 383
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 2 CLECVH 7
CLEC+
Sbjct: 182 CLECLQ 187
>sp|SPI2B_VACCC|PUTATIVE serine proteinase inhibitor 2|Vaccinia virus (strain Copenhagen)
Query: 5 CVHHP 9
CV HP
Sbjct: 193 CVDHP 197
>sp|NSP1_ROTHK|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 1 NCLECVHHP 9
N LE +H+P
Sbjct: 231 NVLENLHNP 239
>sp|NSP1_ROTHP|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 1 NCLECVHHP 9
N LE +H+P
Sbjct: 231 NVLENLHNP 239
>sp|NSP1_ROTHJ|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/K8/1977/G1P3A[9])
Query: 1 NCLECVHHP 9
N LE +H+P
Sbjct: 231 NVLENLHNP 239
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 LECVHHP 9
L C+ HP
Sbjct: 877 LACLFHP 883
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 2 CLECVHHP 9
CLE HP
Sbjct: 86 CLEIGAHP 93
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 LECVHHPG 10
L C+ HP
Sbjct: 877 LTCLFHPA 884
>sp|DNB2_ADE07|DNA-BINDING protein|Human adenovirus B serotype 7
Query: 4 ECVHHPG 10
+C H PG
Sbjct: 383 DCNHKPG 389
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 LECVHHPG 10
L C+ HP
Sbjct: 877 LTCLFHPA 884
85|SequenceR|430|421|EGTGKNCLEC
>sp|REV_HV2D2|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 1 EGTGKNCLEC 10
+G G+N EC
Sbjct: 118 KGYGRNSCEC 127
>sp|VE8E2_HPV57|PROTEIN E8^E2C|Human papillomavirus 57
Query: 6 NCLEC 10
NCL+C
Sbjct: 121 NCLKC 125
>sp|VE8E2_HPV11|PROTEIN E8^E2C|Human papillomavirus 11
Query: 6 NCLEC 10
NCL+C
Sbjct: 104 NCLKC 108
>sp|VE2_HPV2A|REGULATORY protein E2|Human papillomavirus type 2a
Query: 6 NCLEC 10
NCL+C
Sbjct: 320 NCLKC 324
>sp|VE2_HPV07|REGULATORY protein E2|Human papillomavirus 7
Query: 6 NCLEC 10
NCL+C
Sbjct: 305 NCLKC 309
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 TGKNCLEC 10
TG N L+C
Sbjct: 575 TGNNSLKC 582
>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 GTGKNCLEC 10
GTG LEC
Sbjct: 475 GTGIGNLEC 483
>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 GTGKNCLEC 10
GTG LEC
Sbjct: 475 GTGIGNLEC 483
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 TGKNCLEC 10
TG N L+C
Sbjct: 575 TGNNSLKC 582
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 GTGKNCLEC 10
G G N L C
Sbjct: 573 GAGNNTLHC 581
>sp|VE2_HPV6B|REGULATORY protein E2|Human papillomavirus type 6b
Query: 6 NCLEC 10
NCL+C
Sbjct: 295 NCLKC 299
>sp|VE2_HPV6A|REGULATORY protein E2|Human papillomavirus type 6a
Query: 6 NCLEC 10
NCL+C
Sbjct: 295 NCLKC 299
>sp|VE2_HPV03|REGULATORY protein E2|Human papillomavirus 3
Query: 6 NCLEC 10
NCL+C
Sbjct: 312 NCLKC 316
>sp|VE2_HPV57|REGULATORY protein E2|Human papillomavirus 57
Query: 6 NCLEC 10
NCL+C
Sbjct: 312 NCLKC 316
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 GTGKNCLEC 10
G G N L C
Sbjct: 573 GVGNNTLTC 581
>sp|VE2_HPV27|REGULATORY protein E2|Human papillomavirus 27
Query: 6 NCLEC 10
NCL+C
Sbjct: 317 NCLKC 321
>sp|VE2_HPV28|REGULATORY protein E2|Human papillomavirus 28
Query: 6 NCLEC 10
NCL+C
Sbjct: 305 NCLKC 309
>sp|VE2_HPV11|REGULATORY protein E2|Human papillomavirus 11
Query: 6 NCLEC 10
NCL+C
Sbjct: 294 NCLKC 298
>sp|MB43_HHV2H|MEMBRANE protein UL43|Human herpesvirus 2 (strain HG52)
Query: 2 GTGKNCL 8
G+G++CL
Sbjct: 12 GSGEHCL 18
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 2 GTGKNCLEC 10
G G N L C
Sbjct: 573 GVGNNTLHC 581
>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human
Query: 1 EGTGKN 6
EGTG N
Sbjct: 493 EGTGNN 498
>sp|VE2_HPV40|REGULATORY protein E2|Human papillomavirus 40
Query: 6 NCLEC 10
NCL+C
Sbjct: 300 NCLKC 304
>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32
Query: 6 NCLEC 10
NCL+C
Sbjct: 318 NCLKC 322
>sp|PG067_VARV|PROTEIN OPG067|Variola virus
Query: 4 GKNCLEC 10
GKN EC
Sbjct: 329 GKNLQEC 335
>sp|PG067_VAR67|PROTEIN OPG067|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 GKNCLEC 10
GKN EC
Sbjct: 329 GKNLQEC 335
>sp|PG067_VACCD|PROTEIN OPG067|Vaccinia virus (strain Dairen I)
Query: 4 GKNCLEC 10
GKN EC
Sbjct: 329 GKNLQEC 335
>sp|PG067_VACCC|PROTEIN OPG067|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 GKNCLEC 10
GKN EC
Sbjct: 329 GKNLQEC 335
>sp|VE8E2_HPV13|PROTEIN E8^E2C|Human papillomavirus 13
Query: 6 NCLEC 10
NCL+C
Sbjct: 114 NCLKC 118
>sp|VE2_HPV55|REGULATORY protein E2|Human papillomavirus type 55
Query: 6 NCLEC 10
NCL+C
Sbjct: 305 NCLKC 309
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 6 NCLEC 10
NC++C
Sbjct: 2439 NCIDC 2443
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 GTGKNC 7
TGKNC
Sbjct: 588 ATGKNC 593
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 6 NCLEC 10
NCL C
Sbjct: 2428 NCLNC 2432
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 GTGKNCLEC 10
G G N L C
Sbjct: 573 GGGNNTLHC 581
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 6 NCLEC 10
NC++C
Sbjct: 2439 NCIDC 2443
>sp|OBP_HHV7J|REPLICATION origin-binding protein|Human herpesvirus 7 (strain JI)
Query: 1 EGTGKNCLEC 10
E G+N L+C
Sbjct: 13 EWFGQNLLDC 22
>sp|VE2_HPV13|REGULATORY protein E2|Human papillomavirus 13
Query: 6 NCLEC 10
NCL+C
Sbjct: 304 NCLKC 308
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 2 GTGKNCL 8
G G NC+
Sbjct: 1322 GCGTNCM 1328
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 6 NCLEC 10
NCL C
Sbjct: 2428 NCLNC 2432
>sp|VE2_HPV51|REGULATORY protein E2|Human papillomavirus 51
Query: 6 NCLEC 10
NCL+C
Sbjct: 292 NCLKC 296
>sp|VE2_HPV44|REGULATORY protein E2|Human papillomavirus 44
Query: 6 NCLEC 10
NCL+C
Sbjct: 305 NCLKC 309
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 GTGKNCLEC 10
G G N L C
Sbjct: 573 GGGNNTLTC 581
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 GTGKNCLEC 10
G G N L C
Sbjct: 573 GVGNNTLVC 581
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 6 NCLEC 10
NC++C
Sbjct: 2420 NCVDC 2424
>sp|LF1_EBVG|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 GTGKNCLE 9
G GK+C +
Sbjct: 193 GIGKDCAQ 200
>sp|LF1_EBVA8|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 GTGKNCLE 9
G GK+C +
Sbjct: 193 GIGKDCAQ 200
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 6 NCLEC 10
NC++C
Sbjct: 2420 NCVDC 2424
>sp|LF1_EBVB9|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 GTGKNCLE 9
G GK+C +
Sbjct: 193 GIGKDCAQ 200
86|SequenceR|435|426|AMPCVEGTGK
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 1 AMPCVE 6
A+PCVE
Sbjct: 174 ALPCVE 179
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 2 MPCVEGTG 9
+PC+ G G
Sbjct: 698 VPCIAGRG 705
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 2 MPCVEGTG 9
+PC+ G G
Sbjct: 698 VPCIAGRG 705
>sp|TRM1_HHV7J|TRIPARTITE terminase subunit 1|Human herpesvirus 7 (strain JI)
Query: 4 CVEGT 8
CVEGT
Sbjct: 577 CVEGT 581
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 CVEGT 8
CVEGT
Sbjct: 1303 CVEGT 1307
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 CVEGT 8
CVEGT
Sbjct: 1303 CVEGT 1307
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 1 AMPCVEGT 8
A+PC+E T
Sbjct: 1036 ALPCLEPT 1043
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 1 AMPCVEG 7
A+P VEG
Sbjct: 339 ALPSVEG 345
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 1 AMPCVE 6
A+PC E
Sbjct: 201 ALPCAE 206
>sp|EP84_HCMVA|EARLY phosphoprotein p84|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 CVEGTGK 10
CV+G GK
Sbjct: 44 CVDGDGK 50
>sp|E3GL_ADE05|EARLY E3 18.5 kDa glycoprotein|Human adenovirus C serotype 5
Query: 4 CVEGTG 9
CVE TG
Sbjct: 119 CVENTG 124
>sp|EP84_HCMVM|EARLY phosphoprotein p84|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 CVEGTGK 10
CV+G GK
Sbjct: 44 CVDGDGK 50
>sp|NEF_HV1AN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 PCVEGTGK 10
PC G G+
Sbjct: 31 PCAPGVGQ 38
>sp|POXIN_VACCC|POXIN virus (strain Copenhagen) (VACV)
Query: 4 CVEGTG 9
C+EG G
Sbjct: 113 CLEGVG 118
>sp|POXIN_VACCA|POXIN virus (strain Ankara) (VACV)
Query: 4 CVEGTG 9
C+EG G
Sbjct: 113 CLEGVG 118
>sp|POXIN_MONPZ|POXIN-SCHLAFEN virus (strain Zaire-96-I-16) (MPXV)
Query: 4 CVEGTG 9
C+EG G
Sbjct: 111 CLEGVG 116
>sp|POXIN_MONPV|POXIN-SCHLAFEN virus (MPXV)
Query: 4 CVEGTG 9
C+EG G
Sbjct: 111 CLEGVG 116
>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)
Query: 4 CVEGTG 9
C+EG G
Sbjct: 113 CLEGVG 118
>sp|NEF_HV1MV|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 PCVEGTG 9
PC G G
Sbjct: 30 PCAPGVG 36
87|SequenceR|440|431|AAAAAAMPCV
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 AAAAAAMPCV 10
AAA PCV
Sbjct: 2457 AAALLVNPCV 2466
88|SequenceR|445|436|AAAAAAAAAA
***** No hits found ******
89|SequenceR|450|441|AVAAAAAAAA
***** No hits found ******
90|SequenceR|455|446|ATPPAAVAAA
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 2 TPPAAVAAA 10
TPPAA+ A
Sbjct: 475 TPPAAMIEA 483
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 ATPPAA 6
ATPP A
Sbjct: 1790 ATPPGA 1795
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 ATPPAAVA 8
A PP A+A
Sbjct: 1423 APPPPAIA 1430
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 ATPPAA 6
ATPP A
Sbjct: 1790 ATPPGA 1795
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 ATPPAA 6
ATPP A
Sbjct: 1790 ATPPGA 1795
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 1 ATPPAAVAA 9
+TPPA++ A
Sbjct: 1056 STPPASIRA 1064
>sp|NEF_HV197|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 TPPAA 6
TPPAA
Sbjct: 23 TPPAA 27
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 TPPAAVAA 9
T PA++AA
Sbjct: 1764 TDPASIAA 1771
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 3 PPAAVAAA 10
PPAA++ A
Sbjct: 155 PPAAISLA 162
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 TPPAAVAA 9
T PA++AA
Sbjct: 1764 TDPASIAA 1771
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 TPPAAVAA 9
T PA++AA
Sbjct: 1764 TDPASIAA 1771
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 TPPAAVAA 9
T PA++AA
Sbjct: 1764 TDPASIAA 1771
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 TPPAAVAA 9
T PA++AA
Sbjct: 1764 TDPASIAA 1771
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 TPPAAVAA 9
T PA++AA
Sbjct: 1764 TDPASIAA 1771
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 TPPAAVAA 9
T PA++AA
Sbjct: 1764 TDPASIAA 1771
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 TPPAAVAA 9
T PA++AA
Sbjct: 1765 TDPASIAA 1772
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 ATPPAAVAA 9
+TPPAA+
Sbjct: 661 STPPAALGG 669
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 TPPAAVAA 9
T PA++AA
Sbjct: 1765 TDPASIAA 1772
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 ATPPAAVAA 9
+TPPAA+
Sbjct: 661 STPPAALGG 669
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 TPPAAVAA 9
T PA++AA
Sbjct: 1354 TDPASIAA 1361
91|SequenceR|460|451|SLSGVATPPA
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 1 SLSGVATPPA 10
SLS V+ PPA
Sbjct: 713 SLSSVSQPPA 722
>sp|NSP2_ROTHC|NON-STRUCTURAL protein 2|Rotavirus C (isolate RVC/Human/United
Query: 2 LSGVATPP 9
L GVA PP
Sbjct: 48 LYGVAPPP 55
>sp|UNG_HHV2H|URACIL-DNA glycosylase|Human herpesvirus 2 (strain HG52)
Query: 2 LSGVATPP 9
LSG ATPP
Sbjct: 14 LSGDATPP 21
>sp|PG049_VACCP|PROTEIN OPG049|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 SLSGVATPP 9
+L+G TPP
Sbjct: 142 ALNGSTTPP 150
>sp|PG049_VACCC|PROTEIN OPG049|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SLSGVATPP 9
+L+G TPP
Sbjct: 142 ALNGSTTPP 150
>sp|KITH_HHV1|THYMIDINE kinase|Human herpesvirus 1 (HHV-1) (Human
Query: 1 SLSGVATPP 9
LSG A PP
Sbjct: 261 QLSGTAVPP 269
>sp|KITH_HHV1K|THYMIDINE kinase|Human herpesvirus 1 (strain KOS)
Query: 1 SLSGVATPP 9
LSG A PP
Sbjct: 261 QLSGTAVPP 269
>sp|KITH_HHV1C|THYMIDINE kinase|Human herpesvirus 1 (strain CL101)
Query: 1 SLSGVATPP 9
LSG A PP
Sbjct: 261 QLSGTAVPP 269
>sp|KITH_HHV1S|THYMIDINE kinase|Human herpesvirus 1 (strain SC16)
Query: 1 SLSGVATPP 9
LSG A PP
Sbjct: 261 QLSGTAVPP 269
>sp|KITH_HHV1E|THYMIDINE kinase|Human herpesvirus 1 (strain HFEM)
Query: 1 SLSGVATPP 9
LSG A PP
Sbjct: 261 QLSGTAVPP 269
>sp|KITH_HHV11|THYMIDINE kinase|Human herpesvirus 1 (strain 17)
Query: 1 SLSGVATPP 9
LSG A PP
Sbjct: 261 QLSGAAVPP 269
>sp|ORF50_HHV8P|REPLICATION and transcription activator|Human herpesvirus 8 type P
Query: 3 SGVATPPA 10
SGV+ PPA
Sbjct: 132 SGVSLPPA 139
>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)
Query: 3 SGVATPP 9
+G+ATPP
Sbjct: 1267 AGLATPP 1273
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 3 SGVATPP 9
+G+ATPP
Sbjct: 1291 AGLATPP 1297
92|SequenceR|465|456|VGEAGSLSGV
>sp|BILF1_EBVB9|G-PROTEIN coupled receptor BILF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VGEAGSL 7
+GEAGSL
Sbjct: 248 LGEAGSL 254
>sp|NCAP_SEOUS|NUCLEOPROTEIN virus (strain SR-11) (Sapporo
Query: 4 AGSLSG 9
AGSLSG
Sbjct: 253 AGSLSG 258
>sp|J1L_HCMVA|UNCHARACTERIZED protein J1L|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VGEAGSL 7
+GE GSL
Sbjct: 1 IGEVGSL 7
>sp|MB43_HHV2H|MEMBRANE protein UL43|Human herpesvirus 2 (strain HG52)
Query: 1 VGEAGSLSGV 10
+GEAG+ GV
Sbjct: 112 LGEAGAPPGV 121
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 EAGSLSGV 10
EAGSLS +
Sbjct: 2385 EAGSLSSM 2392
93|SequenceR|470|461|QSSVPVGEAG
>sp|NEP_INCYA|NUCLEAR export protein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 2 SSVPVGE 8
SS+P+GE
Sbjct: 110 SSIPIGE 116
>sp|NEP_INCY6|NUCLEAR export protein|Influenza C virus (strain C/Yamagata/1964)
Query: 2 SSVPVGE 8
SS+P+GE
Sbjct: 115 SSIPIGE 121
>sp|NEP_INCTA|NUCLEAR export protein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 2 SSVPVGE 8
SS+P+GE
Sbjct: 110 SSIPIGE 116
>sp|NEP_INCMI|NUCLEAR export protein|Influenza C virus (strain C/Mississippi/1980)
Query: 2 SSVPVGE 8
SS+P+GE
Sbjct: 110 SSIPIGE 116
>sp|NEP_INCJJ|NUCLEAR export protein|Influenza C virus (strain C/JJ/1950)
Query: 2 SSVPVGE 8
SS+P+GE
Sbjct: 115 SSIPIGE 121
>sp|NEP_INCJH|NUCLEAR export protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 2 SSVPVGE 8
SS+P+GE
Sbjct: 110 SSIPIGE 116
>sp|NEP_INCGL|NUCLEAR export protein|Influenza C virus (strain C/Great
Query: 2 SSVPVGE 8
SS+P+GE
Sbjct: 110 SSIPIGE 116
>sp|NEP_INCCA|NUCLEAR export protein|Influenza C virus (strain C/California/1978)
Query: 2 SSVPVGE 8
SS+P+GE
Sbjct: 115 SSIPIGE 121
>sp|NEP_INCAA|NUCLEAR export protein|Influenza C virus (strain C/Ann
Query: 2 SSVPVGE 8
SS+P+GE
Sbjct: 115 SSIPIGE 121
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 4 VPVGEA 9
VP+GEA
Sbjct: 740 VPIGEA 745
>sp|NEP_INCHY|NUCLEAR export protein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 2 SSVPVGE 8
+S+P+GE
Sbjct: 115 NSIPIGE 121
>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)
Query: 3 SVPVGEAG 10
+VP+ EAG
Sbjct: 484 TVPIKEAG 491
>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 SVPVGEAG 10
+VP+ EAG
Sbjct: 484 TVPIKEAG 491
>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)
Query: 3 SVPVGEAG 10
+VP+ EAG
Sbjct: 484 TVPIKEAG 491
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 3 SVPVGEA 9
SVPVG+A
Sbjct: 2170 SVPVGKA 2176
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 3 SVPVGEA 9
SVPVG+A
Sbjct: 2170 SVPVGKA 2176
>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 SVPVGEAG 10
+VP+ EAG
Sbjct: 484 NVPIKEAG 491
>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)
Query: 3 SVPVGEAG 10
+VP+ EAG
Sbjct: 484 NVPIKEAG 491
>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)
Query: 3 SVPVGEAG 10
+VP+ EAG
Sbjct: 484 TVPIKEAG 491
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 4 VPVGEA 9
VPVGE+
Sbjct: 1581 VPVGES 1586
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 VPVGEA 9
VPVGE+
Sbjct: 1581 VPVGES 1586
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 3 SVPVGEA 9
SVP+G+A
Sbjct: 2170 SVPIGKA 2176
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 3 SVPVGEA 9
SVP+G+A
Sbjct: 2170 SVPIGKA 2176
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 SVPVGEAG 10
+VP+G+ G
Sbjct: 858 NVPIGDMG 865
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 SVPVGEAG 10
+VP+G+ G
Sbjct: 858 NVPIGDMG 865
94|SequenceR|477|466|WPQSPLPQSSVP
>sp|PG057_VACCI|ENVELOPE phospholipase OPG057|Vaccinia virus (strain IHD-J) (VACV)
Query: 1 WPQSPLPQSS 10
WP +P+P +
Sbjct: 2 WPFAPVPAGA 11
>sp|PG057_VACCA|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Ankara) (VACV)
Query: 1 WPQSPLPQSS 10
WP +P+P +
Sbjct: 2 WPFAPVPAGA 11
>sp|GL_HHV7J|ENVELOPE glycoprotein L|Human herpesvirus 7 (strain JI)
Query: 3 QSPLPQSSV 11
Q+P+P+S +
Sbjct: 54 QAPIPKSDI 62
>sp|UL32_HHV6Z|PACKAGING protein UL32 homolog|Human herpesvirus 6B (strain Z29)
Query: 2 PQSPLPQSS 10
PQ P+P +
Sbjct: 28 PQPPIPSET 36
>sp|UL32_HHV6U|PACKAGING protein UL32|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PQSPLPQSS 10
PQ P+P +
Sbjct: 28 PQPPIPSET 36
>sp|ORF23_HHV8P|PROTEIN ORF23|Human herpesvirus 8 type P
Query: 2 PQSPLPQSSV 11
P+SPLP+ +
Sbjct: 170 PESPLPRHPI 179
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 PQSPLPQSSV 11
PQ+P+P S+
Sbjct: 254 PQNPVPVGSI 263
>sp|TAT_HV1U4|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 PQSPLPQS 9
P+ PLPQS
Sbjct: 70 PKQPLPQS 77
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 7 PQSSVP 12
PQS+VP
Sbjct: 911 PQSNVP 916
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 7 PQSSVP 12
PQS+VP
Sbjct: 911 PQSNVP 916
>sp|VIE1_HCMVT|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 PQSPLPQS 9
P+SP+P +
Sbjct: 404 PESPVPAT 411
>sp|VIE1_HCMVA|IMMEDIATE early protein IE1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PQSPLPQS 9
P+SP+P +
Sbjct: 404 PESPVPAT 411
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 4 SPLPQSSVP 12
S LP S+VP
Sbjct: 409 STLPDSTVP 417
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 4 SPLPQSSVP 12
S LP S+VP
Sbjct: 409 STLPDSTVP 417
>sp|PRO_ADE40|PROTEASE adenovirus F serotype 40
Query: 1 WPQSPLPQS 9
WP SP+ ++
Sbjct: 136 WPTSPMERN 144
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 4 SPLPQSSVP 12
S LP S+VP
Sbjct: 409 STLPDSTVP 417
>sp|VIE1_HCMVM|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PQSPLPQS 9
P+SP+P +
Sbjct: 404 PESPVPAT 411
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 4 SPLPQSSVP 12
S LP S+VP
Sbjct: 409 STLPDSTVP 417
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 4 SPLPQSSVP 12
S LP S+VP
Sbjct: 407 STLPDSTVP 415
THE END