1|Sequence|1|10|MMWGAGSPLA
>sp|U10_HHV6Z|PROTEIN U10|Human herpesvirus 6B (strain Z29)
Query: 1 MMWGAGSPL 9
M+W G+PL
Sbjct: 403 MLWAPGTPL 411
>sp|U10_HHV6U|U10 protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 MMWGAGSPL 9
M+W G+PL
Sbjct: 403 MLWAPGTPL 411
>sp|U10_HHV6H|PROTEIN U10|Human herpesvirus 6B (HHV-6 variant
Query: 1 MMWGAGSPL 9
M+W G+PL
Sbjct: 403 MLWAPGTPL 411
>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31
Query: 3 WGAGSP 8
WG GSP
Sbjct: 170 WGKGSP 175
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 3 WGAGSP 8
WG GSP
Sbjct: 169 WGKGSP 174
>sp|IR10_HCMVM|PROTEIN IRL10|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 WGAGSPLA 10
WGAGS +A
Sbjct: 80 WGAGSFVA 87
>sp|IR10_HCMVA|PROTEIN IRL10|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 WGAGSPLA 10
WGAGS +A
Sbjct: 81 WGAGSFVA 88
>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52
Query: 3 WGAGSP 8
WG G+P
Sbjct: 198 WGKGTP 203
>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67
Query: 3 WGAGSP 8
WG G+P
Sbjct: 199 WGKGTP 204
>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35
Query: 3 WGAGSP 8
WG G+P
Sbjct: 169 WGKGTP 174
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 3 WGAGSP 8
WG G+P
Sbjct: 167 WGMGTP 172
>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40
Query: 3 WGAGSP 8
WG G+P
Sbjct: 167 WGKGTP 172
>sp|VL1_HPV34|MAJOR capsid protein L1|Human papillomavirus type 34
Query: 3 WGAGSP 8
WG G+P
Sbjct: 194 WGTGTP 199
>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28
Query: 3 WGAGSP 8
WG G+P
Sbjct: 169 WGKGTP 174
>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3
Query: 3 WGAGSP 8
WG G+P
Sbjct: 197 WGKGTP 202
>sp|VE6_HPV41|PROTEIN E6|Human papillomavirus type 41
Query: 1 MMWGAGSP 8
+ WG G P
Sbjct: 64 LSWGEGGP 71
>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10
Query: 3 WGAGSP 8
WG G+P
Sbjct: 197 WGKGTP 202
>sp|MB43_VZVO|MEMBRANE protein UL43 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 MMWGAGSPLA 10
++W G P++
Sbjct: 114 VLWAVGCPIS 123
>sp|MB43_VZVD|MEMBRANE protein UL43 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 MMWGAGSPLA 10
++W G P++
Sbjct: 114 VLWAVGCPIS 123
>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United
Query: 3 WGAGSPL 9
WG+GS L
Sbjct: 50 WGSGSIL 56
>sp|UL132_HCMVT|ENVELOPE glycoprotein UL132|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 WGAGSPL 9
+G GSPL
Sbjct: 205 YGRGSPL 211
>sp|UL132_HCMVM|ENVELOPE glycoprotein UL132|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 WGAGSPL 9
+G GSPL
Sbjct: 205 YGRGSPL 211
>sp|UL132_HCMVA|ENVELOPE glycoprotein UL132|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 WGAGSPL 9
+G GSPL
Sbjct: 205 YGRGSPL 211
>sp|VE6_HPV94|PROTEIN E6|Human papillomavirus type 94
Query: 1 MMWGAGSP 8
++W AG P
Sbjct: 51 LVWKAGVP 58
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 MWGAGSPLA 10
+WG +PL+
Sbjct: 463 VWGGDNPLS 471
>sp|VL1_HPV55|MAJOR capsid protein L1|Human papillomavirus type 55
Query: 3 WGAGSP 8
WG G P
Sbjct: 166 WGKGKP 171
>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 WGAGSPLA 10
WG+G L+
Sbjct: 50 WGSGETLS 57
>sp|VE6_HPV10|PROTEIN E6|Human papillomavirus type 10
Query: 1 MMWGAGSP 8
++W AG P
Sbjct: 51 LVWRAGVP 58
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 3 WGAGSP 8
WG G P
Sbjct: 195 WGQGVP 200
>sp|KR2_EBVG|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 MWGAG 6
MWG G
Sbjct: 209 MWGMG 213
>sp|KR2_EBVB9|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 MWGAG 6
MWG G
Sbjct: 209 MWGMG 213
>sp|KR2_EBVA8|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 MWGAG 6
MWG G
Sbjct: 209 MWGMG 213
>sp|C_MEASY|PROTEIN C|Measles virus (strain Yamagata-1) (MeV)
Query: 2 MWGAGSPL 9
+WG+G P+
Sbjct: 167 LWGSGLPM 174
>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 MWGAGSPL 9
+W G PL
Sbjct: 518 VWRGGEPL 525
>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 MWGAGSPL 9
+W G PL
Sbjct: 518 VWRGGEPL 525
>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)
Query: 3 WGAGSPL 9
WG G+PL
Sbjct: 1175 WGLGAPL 1181
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 MWGAGSPLA 10
+WG +PL+
Sbjct: 466 VWGRDNPLS 474
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 3 WGAGSPL 9
WG G+PL
Sbjct: 1203 WGLGAPL 1209
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 MWGAGSPLA 10
+WG +PL+
Sbjct: 467 VWGRDNPLS 475
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 3 WGAGSP 8
WG GSP
Sbjct: 800 WGLGSP 805
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 3 WGAGSP 8
WG GSP
Sbjct: 800 WGLGSP 805
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 3 WGAGSP 8
WG GSP
Sbjct: 800 WGLGSP 805
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 3 WGAGSP 8
WG GSP
Sbjct: 800 WGLGSP 805
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 3 WGAGSP 8
WG GSP
Sbjct: 800 WGLGSP 805
2|Sequence|6|15|GSPLAWLSAG
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 GSPLAWLSA 9
GSP AW+ A
Sbjct: 1089 GSPWAWIKA 1097
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 GSPLAWLSA 9
GSP AW+ A
Sbjct: 1089 GSPWAWIKA 1097
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 GSPLAWLSA 9
GSP AW+ A
Sbjct: 1089 GSPWAWIKA 1097
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 GSPLAWLSA 9
GSP AW+ A
Sbjct: 1089 GSPWAWIKA 1097
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 3 PLAWLSA 9
P AWLSA
Sbjct: 1646 PKAWLSA 1652
>sp|PG153_VAR67|ENVELOP protein OPG153|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 GSPLAWLS 8
G+P+ WL+
Sbjct: 75 GAPMQWLT 82
>sp|PG153_MONPV|ENVELOP protein OPG153|Monkeypox virus (MPXV)
Query: 1 GSPLAWLS 8
G+P+ WL+
Sbjct: 75 GAPMQWLT 82
>sp|A26_VACCC|PUTATIVE A-type inclusion protein|Vaccinia virus (strain Copenhagen)
Query: 1 GSPLAWLS 8
G+P+ WL+
Sbjct: 75 GAPMQWLT 82
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 GSPLAWLS 8
G P+ WLS
Sbjct: 1981 GKPVIWLS 1988
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 GSPLAWLS 8
G P+ WLS
Sbjct: 1981 GKPVIWLS 1988
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 GSPLAW 6
G PLAW
Sbjct: 1625 GRPLAW 1630
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 1 GSPLAW 6
G PLAW
Sbjct: 1624 GRPLAW 1629
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 GSPLAW 6
G PLAW
Sbjct: 1624 GRPLAW 1629
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 GSPLAWLSA 9
GSP AW+ +
Sbjct: 1089 GSPWAWIKS 1097
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 PLAWLSAG 10
P+AW S G
Sbjct: 306 PMAWYSMG 313
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 1 GSPLAWLSA 9
PLAW A
Sbjct: 52 AQPLAWTRA 60
>sp|P100_HHV7J|LARGE structural phosphoprotein|Human herpesvirus 7 (strain JI)
Query: 3 PLAWLS 8
P AW+S
Sbjct: 7 PFAWIS 12
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 1 GSPLAW 6
GSP+ W
Sbjct: 1984 GSPMLW 1989
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 2 SPLAWLSA 9
+PL W++A
Sbjct: 619 NPLMWITA 626
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 3 PLAWLSAG 10
P+AW+ +G
Sbjct: 3295 PMAWVPSG 3302
>sp|VU25_HHV7J|PROTEIN U25|Human herpesvirus 7 (strain JI)
Query: 3 PLAWLSAG 10
PL W S G
Sbjct: 303 PLLWKSVG 310
>sp|GLYCP_HENDH|GLYCOPROTEIN G|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 4 LAWLSAG 10
L W+SAG
Sbjct: 517 LNWVSAG 523
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 2 SPLAWLSA 9
+PL W++A
Sbjct: 619 NPLMWITA 626
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 2 SPLAWL 7
SP+ WL
Sbjct: 742 SPVGWL 747
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 GSPLAWL 7
G P+ WL
Sbjct: 2037 GKPVIWL 2043
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 GSPLAWL 7
G P+ WL
Sbjct: 2037 GKPVIWL 2043
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 3 PLAWLSA 9
PL WL A
Sbjct: 764 PLFWLQA 770
>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 6 WLSAG 10
WLSAG
Sbjct: 415 WLSAG 419
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 3 PLAWLSA 9
PL WL A
Sbjct: 764 PLFWLQA 770
>sp|ST_POVJC|SMALL t antigen|JC polyomavirus (JCPyV) (JCV)
Query: 2 SPLAWL 7
SPL W+
Sbjct: 129 SPLVWI 134
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 3 PLAWLSA 9
PL WL A
Sbjct: 764 PLFWLQA 770
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 PLAWLSA 9
PL WL A
Sbjct: 764 PLFWLQA 770
>sp|CAP8_ADE12|PRE-HEXON-LINKING protein VIII|Human adenovirus A serotype 12
Query: 2 SPLAWLSAG 10
S + WLSAG
Sbjct: 29 SKMNWLSAG 37
>sp|U91_HHV6U|UNCHARACTERIZED protein U91|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 GSPLAWLSA 9
G P W+ A
Sbjct: 89 GEPPVWIQA 97
>sp|CAP8_ADE40|PRE-HEXON-LINKING protein VIII|Human adenovirus F serotype 40
Query: 2 SPLAWLSAG 10
S + WLSAG
Sbjct: 29 SRMNWLSAG 37
>sp|CAP8_ADE41|PRE-HEXON-LINKING protein VIII|Human adenovirus F serotype 41
Query: 2 SPLAWLSAG 10
S + WLSAG
Sbjct: 29 SRMNWLSAG 37
>sp|GLYCP_NIPAV|GLYCOPROTEIN G|Nipah virus
Query: 6 WLSAG 10
W+SAG
Sbjct: 519 WISAG 523
>sp|HBSAG_HBVD1|LARGE envelope protein|Hepatitis B virus genotype D
Query: 2 SPLAWLSA 9
SP+ WLS
Sbjct: 350 SPIVWLSV 357
>sp|HBSAG_HBVD4|LARGE envelope protein|Hepatitis B virus genotype D
Query: 2 SPLAWLSA 9
SP+ WLS
Sbjct: 350 SPIVWLSV 357
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 3 PLAWLSA 9
PLAWL
Sbjct: 918 PLAWLHT 924
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 3 PLAWLSA 9
PL WL A
Sbjct: 920 PLVWLHA 926
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 GSPLAWLS 8
G P+ W++
Sbjct: 1920 GKPILWVN 1927
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 GSPLAWLS 8
G P+ W++
Sbjct: 1920 GKPILWVN 1927
3|Sequence|11|20|WLSAGSGNVN
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 WLSAGSGNV 9
W+S G+GN+
Sbjct: 2711 WVSCGTGNI 2719
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 WLSAGSGNV 9
W+S G+GN+
Sbjct: 2712 WVSCGTGNI 2720
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 WLSAGSGNV 9
W+S G+GN+
Sbjct: 2712 WVSCGTGNI 2720
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 WLSAGSGNV 9
W+S G+GN+
Sbjct: 2709 WISNGTGNI 2717
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 WLSAGSGNV 9
W+S G+GN+
Sbjct: 2709 WISNGTGNI 2717
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 WLSAGSGNV 9
W+S G+GN+
Sbjct: 2709 WISNGTGNI 2717
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 WLSAGSGNV 9
W+S G+GN+
Sbjct: 2709 WISNGTGNI 2717
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 WLSAGSGNV 9
W+S G+GN+
Sbjct: 2709 WISNGTGNI 2717
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WLSAGSGNV 9
WLS SGN+
Sbjct: 2711 WLSNASGNI 2719
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 WLSAGSGNV 9
W+S SGN+
Sbjct: 2707 WVSGASGNI 2715
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 WLSAGSGNV 9
W+S SGN+
Sbjct: 2707 WVSGASGNI 2715
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 WLSAGSGNV 9
W+S SGN+
Sbjct: 2707 WVSGASGNI 2715
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 WLSAGSGNV 9
W+S SGNV
Sbjct: 2741 WVSGSSGNV 2749
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 WLSAGSGNV 9
W+S SGN+
Sbjct: 2750 WVSGASGNI 2758
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 WLSAGSGNV 9
W+S SGNV
Sbjct: 2749 WVSRASGNV 2757
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 WLSAGSGNV 9
W+S SGNV
Sbjct: 2749 WVSRASGNV 2757
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WLSAGSGNV 9
W+S SGN+
Sbjct: 2711 WVSNASGNI 2719
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WLSAGSGNV 9
W+S SGN+
Sbjct: 2711 WVSNASGNI 2719
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 2 LSAGSGNVN 10
L+ G GN+N
Sbjct: 78 LTCGRGNIN 86
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WLSAGSGNV 9
W+S SGN+
Sbjct: 2708 WVSNASGNI 2716
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WLSAGSGNV 9
W+S SGN+
Sbjct: 2711 WVSNASGNI 2719
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WLSAGSGNV 9
W+S SGN+
Sbjct: 2711 WVSNASGNI 2719
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 WLSAGSGNV 9
W+S SGN+
Sbjct: 2711 WVSNASGNI 2719
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 2 LSAGSGNVN 10
L+ G+GN N
Sbjct: 286 LAGGTGNTN 294
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 WLSAGSGNV 9
W+S +GNV
Sbjct: 2748 WVSGAAGNV 2756
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 WLSAGSGNV 9
W+S +GNV
Sbjct: 2748 WVSGAAGNV 2756
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 WLSAGSGNV 9
W+S +GNV
Sbjct: 2748 WVSGAAGNV 2756
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 WLSAGSGNV 9
W+S +GNV
Sbjct: 2748 WVSGAAGNV 2756
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 WLSAGSGNV 9
W+S SGN+
Sbjct: 2746 WVSHASGNI 2754
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 WLSAGSGNV 9
W+S SGN+
Sbjct: 2707 WVSGVSGNI 2715
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 WLSAGSGNV 9
W+S SGN+
Sbjct: 2707 WVSGVSGNI 2715
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 WLSAGSGNV 9
W+S +GN+
Sbjct: 2745 WVSGAAGNI 2753
>sp|VP6_ROTHW|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 WLSAGS 6
WL+AGS
Sbjct: 181 WLNAGS 186
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 WLSAGSGNV 9
W+S +GN+
Sbjct: 2750 WVSGAAGNI 2758
>sp|VP6_ROTWI|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United
Query: 1 WLSAGS 6
WL+AGS
Sbjct: 181 WLNAGS 186
>sp|VP6_ROTHT|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 WLSAGS 6
WL+AGS
Sbjct: 181 WLNAGS 186
>sp|VP6_ROTYO|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 WLSAGS 6
WL+AGS
Sbjct: 181 WLNAGS 186
>sp|VP6_ROTAD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 WLSAGS 6
WL+AGS
Sbjct: 181 WLNAGS 186
>sp|UL87_HHV7J|PROTEIN U58|Human herpesvirus 7 (strain JI)
Query: 1 WLSAGSG 7
W AG+G
Sbjct: 569 WFKAGTG 575
>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)
Query: 1 WLSAGSG 7
W AG+G
Sbjct: 578 WFKAGTG 584
>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 WLSAGSG 7
W AG+G
Sbjct: 578 WFKAGTG 584
>sp|VP6_ROTHK|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 WLSAGS 6
WL+AGS
Sbjct: 181 WLNAGS 186
>sp|VP6_ROTHP|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 WLSAGS 6
WL+AGS
Sbjct: 181 WLNAGS 186
>sp|VP6_ROTHU|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 1 WLSAGS 6
WL+AGS
Sbjct: 181 WLNAGS 186
>sp|VP6_ROTHS|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 WLSAGS 6
WL+AGS
Sbjct: 181 WLNAGS 186
>sp|VP6_ROTH7|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United
Query: 1 WLSAGS 6
WL+AGS
Sbjct: 181 WLNAGS 186
>sp|VP6_ROTH1|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 1 WLSAGS 6
WL+AGS
Sbjct: 181 WLNAGS 186
>sp|VP6_ROTHD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 WLSAGS 6
WL+AGS
Sbjct: 181 WLNAGS 186
>sp|VP6_ROTH6|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 WLSAGS 6
WL+AGS
Sbjct: 181 WLNAGS 186
>sp|VP6_ROT41|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 1 WLSAGS 6
WL+AGS
Sbjct: 181 WLNAGS 186
>sp|VP6_ROTHL|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 WLSAGS 6
WL+AGS
Sbjct: 181 WLNAGS 186
>sp|VP6_ROTH3|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 WLSAGS 6
WL+AGS
Sbjct: 181 WLNAGS 186
>sp|PG015_MONPV|ANKYRIN repeat domain-containing protein OPG015|Monkeypox virus (MPXV)
Query: 1 WLSAGSGNVN 10
WL NVN
Sbjct: 239 WLLENGANVN 248
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 WLSAGS 6
WL+AG+
Sbjct: 153 WLNAGA 158
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 WLSAGS 6
WL+AG+
Sbjct: 153 WLNAGA 158
>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 WLSAGSG 7
W +AG G
Sbjct: 224 WAAAGQG 230
>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 WLSAGSG 7
W +AG G
Sbjct: 224 WAAAGQG 230
>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 WLSAGSG 7
W +AG G
Sbjct: 224 WAAAGQG 230
>sp|TRX1_HHV7J|TRIPLEX capsid protein 1|Human herpesvirus 7 (strain JI)
Query: 1 WLSAGSGNVN 10
+L G GN+N
Sbjct: 230 YLINGDGNLN 239
4|Sequence|16|25|SGNVNVSSVG
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus
Query: 1 SGNVNVSS 8
+GN NVSS
Sbjct: 67 AGNTNVSS 74
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus
Query: 1 SGNVNVSS 8
+GN NVSS
Sbjct: 67 AGNTNVSS 74
>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 1 SGNVNVSSV 9
+GNV++SS+
Sbjct: 82 TGNVDISSL 90
>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 1 SGNVNVSSV 9
+GNV++SS+
Sbjct: 82 TGNVDISSL 90
>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann
Query: 1 SGNVNVSSV 9
+GNV++SS+
Sbjct: 82 TGNVDISSL 90
>sp|VL2_HPV33|MINOR capsid protein L2|Human papillomavirus 33
Query: 4 VNVSSVG 10
+NVSSVG
Sbjct: 142 INVSSVG 148
>sp|VL2_HPV67|MINOR capsid protein L2|Human papillomavirus 67
Query: 4 VNVSSVG 10
+NVSS+G
Sbjct: 142 INVSSIG 148
>sp|V_HENDH|NON-STRUCTURAL protein V|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 GNVNVSSV 9
GNVN+ S+
Sbjct: 228 GNVNLDSI 235
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 1 SGNVNVSS 8
SGN NV++
Sbjct: 850 SGNCNVAT 857
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 1 SGNVNVSS 8
SGN NV++
Sbjct: 850 SGNCNVAT 857
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 1 SGNVNVSS 8
SGN NV++
Sbjct: 850 SGNCNVAA 857
>sp|W_HENDH|PROTEIN W|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 GNVNVSSV 9
GNVN+ S+
Sbjct: 228 GNVNLDSI 235
>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 GNVNVSSV 9
GNVN+ S+
Sbjct: 228 GNVNLDSI 235
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 2 GNVNVS 7
GN+NVS
Sbjct: 44 GNLNVS 49
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 2 GNVNVS 7
GN+NVS
Sbjct: 44 GNLNVS 49
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 2 GNVNVS 7
GN+NVS
Sbjct: 44 GNLNVS 49
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 2 GNVNVS 7
GN+NVS
Sbjct: 44 GNLNVS 49
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 2 GNVNVS 7
GN+NVS
Sbjct: 44 GNLNVS 49
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 2 GNVNVS 7
GN+NVS
Sbjct: 44 GNLNVS 49
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 2 GNVNVS 7
GN+NVS
Sbjct: 44 GNLNVS 49
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 2 GNVNVS 7
GN+NVS
Sbjct: 44 GNLNVS 49
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 2 GNVNVS 7
GN+NVS
Sbjct: 44 GNLNVS 49
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 2 GNVNVS 7
GN+NVS
Sbjct: 44 GNLNVS 49
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 2 GNVNVS 7
GN+NVS
Sbjct: 44 GNLNVS 49
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 2 GNVNVS 7
GN+NVS
Sbjct: 44 GNLNVS 49
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 2 GNVNVS 7
GN+NVS
Sbjct: 44 GNLNVS 49
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 2 GNVNVS 7
GN+NVS
Sbjct: 44 GNLNVS 49
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 2 GNVNVS 7
GN+NVS
Sbjct: 44 GNLNVS 49
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 GNVNVS 7
GN+NVS
Sbjct: 44 GNLNVS 49
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 2 GNVNVS 7
GN+NVS
Sbjct: 44 GNLNVS 49
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 GNVNVS 7
GN+NVS
Sbjct: 44 GNLNVS 49
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 2 GNVNVS 7
GN+NVS
Sbjct: 46 GNLNVS 51
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 2 GNVNVS 7
GN+NVS
Sbjct: 46 GNLNVS 51
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 GNVNVS 7
GN+NVS
Sbjct: 46 GNLNVS 51
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 2 GNVNVS 7
GN+NVS
Sbjct: 46 GNLNVS 51
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 2 GNVNVS 7
GN+NVS
Sbjct: 46 GNLNVS 51
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 GNVNVS 7
GN+NVS
Sbjct: 46 GNLNVS 51
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 GNVNVS 7
GN+NVS
Sbjct: 46 GNLNVS 51
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 GNVNVS 7
GN+NVS
Sbjct: 46 GNLNVS 51
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 GNVNVS 7
GN+NVS
Sbjct: 44 GNLNVS 49
>sp|VL2_HPV52|MINOR capsid protein L2|Human papillomavirus 52
Query: 4 VNVSSVG 10
+NV+S+G
Sbjct: 142 INVTSIG 148
5|Sequence|21|30|VSSVGPAEGP
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 VSSVGPAEGP 10
+ S GP EGP
Sbjct: 778 IMSKGPGEGP 787
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VSSVGPAEGP 10
+ S GP EGP
Sbjct: 778 IMSKGPGEGP 787
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 VSSVGPAEGP 10
+ S GP EGP
Sbjct: 778 IMSKGPGEGP 787
>sp|VE2_HPV28|REGULATORY protein E2|Human papillomavirus 28
Query: 2 SSVGPAEGP 10
+SVG EGP
Sbjct: 227 TSVGATEGP 235
>sp|VE2_HPV40|REGULATORY protein E2|Human papillomavirus 40
Query: 3 SVGPAEGP 10
+VGPA+ P
Sbjct: 232 TVGPAQAP 239
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 VGPAEGP 10
VGP EGP
Sbjct: 1912 VGPGEGP 1918
>sp|VE6_HPV41|PROTEIN E6|Human papillomavirus type 41
Query: 1 VSSVGPA 7
V SVGPA
Sbjct: 7 VGSVGPA 13
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 4 VGPAEG 9
VGPAEG
Sbjct: 1911 VGPAEG 1916
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 4 VGPAEG 9
VGPAEG
Sbjct: 1910 VGPAEG 1915
>sp|VE8E2_HPV28|PROTEIN E8^E2C|Human papillomavirus 28
Query: 2 SSVGPAEGP 10
+SVG EGP
Sbjct: 27 TSVGATEGP 35
>sp|NCAP_PIV5|NUCLEOPROTEIN virus 5 (strain W3)
Query: 2 SSVGPAEGP 10
+S GP GP
Sbjct: 469 TSAGPRTGP 477
>sp|VL2_HPV82|MINOR capsid protein L2|Human papillomavirus 82
Query: 1 VSSVGPAE 8
+SS+ PAE
Sbjct: 326 ISSIAPAE 333
>sp|VL2_HPV39|MINOR capsid protein L2|Human papillomavirus 39
Query: 1 VSSVGPAE 8
+SS+ PAE
Sbjct: 323 ISSIAPAE 330
>sp|NRAM_I54A2|NEURAMINIDASE A virus (strain A/Malaysia:Malaya/302/1954
Query: 5 GPAEGP 10
GP++GP
Sbjct: 245 GPSDGP 250
>sp|NRAM_I54A0|NEURAMINIDASE A virus (strain A/Leningrad/1/1954
Query: 5 GPAEGP 10
GP++GP
Sbjct: 245 GPSDGP 250
>sp|NRAM_I51A0|NEURAMINIDASE A virus (strain A/USA:Albany/12/1951
Query: 5 GPAEGP 10
GP++GP
Sbjct: 245 GPSDGP 250
>sp|NRAM_I77AB|NEURAMINIDASE A virus (strain A/USSR/90/1977
Query: 5 GPAEGP 10
GP++GP
Sbjct: 245 GPSDGP 250
>sp|NRAM_I77AA|NEURAMINIDASE A virus (strain A/Brazil/11/1978
Query: 5 GPAEGP 10
GP++GP
Sbjct: 245 GPSDGP 250
>sp|UL56_HHV2H|PROTEIN UL56|Human herpesvirus 2 (strain HG52)
Query: 3 SVGPAEGP 10
SVGPA+ P
Sbjct: 163 SVGPADQP 170
>sp|NRAM_I45A0|NEURAMINIDASE A virus (strain A/USA:Huston/AA/1945
Query: 5 GPAEGP 10
GP++GP
Sbjct: 245 GPSDGP 250
>sp|VL2_HPV57|MINOR capsid protein L2|Human papillomavirus 57
Query: 3 SVGPAEGP 10
SVGP GP
Sbjct: 412 SVGPGMGP 419
6|Sequence|26|35|PAEGPTGPAA
>sp|E312_ADE12|EARLY E3A 12.1 kDa protein|Human adenovirus A serotype 12
Query: 1 PAEGPTGPA 9
P E P GPA
Sbjct: 36 PEEHPQGPA 44
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 PAEGPTGP 8
PA GP P
Sbjct: 728 PARGPDRP 735
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 AEGPTGPAA 10
A P GPAA
Sbjct: 8 ALAPVGPAA 16
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 AEGPTGPAA 10
A P GPAA
Sbjct: 8 ALAPVGPAA 16
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PAEGPTG 7
P EGP G
Sbjct: 783 PGEGPGG 789
>sp|CEP2_HCMVA|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 GPTGPAA 10
GP GPA+
Sbjct: 108 GPLGPAS 114
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PAEGPTG 7
P EGP G
Sbjct: 783 PGEGPGG 789
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PAEGPTG 7
P EGP G
Sbjct: 783 PGEGPGG 789
>sp|CEP2_HCMVM|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 GPTGPAA 10
GP GPA+
Sbjct: 108 GPLGPAS 114
>sp|VSGP_EBOSU|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 EGPTGP 8
E PTGP
Sbjct: 330 ESPTGP 335
>sp|TRM2_HHV2H|TRIPARTITE terminase subunit 2|Human herpesvirus 2 (strain HG52)
Query: 1 PAEGPTGPAA 10
P + P GPAA
Sbjct: 84 PIKAPDGPAA 93
>sp|VSGP_EBOSM|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 3 EGPTGP 8
E PTGP
Sbjct: 330 ESPTGP 335
>sp|VSGP_EBOSB|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 3 EGPTGP 8
E PTGP
Sbjct: 330 ESPTGP 335
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 PAEGPTGP 8
PAEGP P
Sbjct: 1446 PAEGPADP 1453
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 1 PAEGPTGPAA 10
PA P PA+
Sbjct: 668 PASPPNSPAS 677
>sp|VIRF1_HHV8P|VIRF-1 herpesvirus 8 type P
Query: 1 PAEGPTG 7
P EGP+G
Sbjct: 45 PGEGPSG 51
7|Sequence|31|40|TGPAAPLPSP
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 TGPAAPLPSP 10
TGP PLP+P
Sbjct: 2067 TGPCTPLPAP 2076
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TGPAAPLPSP 10
TGP PLP+P
Sbjct: 2067 TGPCTPLPAP 2076
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 TGPAAPLPSP 10
TGP PLP+P
Sbjct: 2067 TGPCTPLPAP 2076
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 TGPAAPLPSP 10
TGP+ P PSP
Sbjct: 2073 TGPSTPCPSP 2082
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 TGPAAPLPSP 10
TGP+ P+P P
Sbjct: 2069 TGPSVPIPEP 2078
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 TGPAAPLPSP 10
TGP+ P+P P
Sbjct: 2068 TGPSVPIPEP 2077
>sp|TOP1_VAR67|DNA topoisomerase 1|Variola virus (isolate Human/India/Ind3/1967)
Query: 5 APLPSP 10
+PLPSP
Sbjct: 243 SPLPSP 248
>sp|TOP1_VACCC|DNA topoisomerase 1B|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 APLPSP 10
+PLPSP
Sbjct: 243 SPLPSP 248
>sp|TOP1_VACCA|DNA topoisomerase 1B|Vaccinia virus (strain Ankara) (VACV)
Query: 5 APLPSP 10
+PLPSP
Sbjct: 243 SPLPSP 248
>sp|TOP1_MONPV|DNA topoisomerase I|Monkeypox virus (MPXV)
Query: 5 APLPSP 10
+PLPSP
Sbjct: 243 SPLPSP 248
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 TGPAAPLPSP 10
TGP P+P+P
Sbjct: 2067 TGPGVPIPAP 2076
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 TGPAAPLPSP 10
TGP+ P+P+P
Sbjct: 2071 TGPSIPIPAP 2080
>sp|X_HBVC2|PROTEIN X|Hepatitis B virus genotype C
Query: 1 TGPAAPLPSP 10
+GP PLPSP
Sbjct: 31 SGPFGPLPSP 40
>sp|X_HBVC8|PROTEIN X|Hepatitis B virus genotype C
Query: 1 TGPAAPLPSP 10
+GP PLPSP
Sbjct: 31 SGPFGPLPSP 40
>sp|X_HBVC1|PROTEIN X|Hepatitis B virus genotype C
Query: 1 TGPAAPLPSP 10
+GP PLPSP
Sbjct: 31 SGPFGPLPSP 40
>sp|X_HBVCJ|PROTEIN X|Hepatitis B virus genotype C
Query: 1 TGPAAPLPSP 10
+GP PLPSP
Sbjct: 31 SGPFGPLPSP 40
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 TGPAAPLPSP 10
TGP+ P+P P
Sbjct: 2065 TGPSVPVPEP 2074
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TGPAAPLPSP 10
TGP AP P+P
Sbjct: 2067 TGPCAPSPAP 2076
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 TGPAAPLPS 9
T P P+PS
Sbjct: 483 TNPNTPIPS 491
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 3 PAAPLPS 9
P AP+PS
Sbjct: 720 PGAPIPS 726
>sp|GH_HHV6Z|ENVELOPE glycoprotein H|Human herpesvirus 6B (strain Z29)
Query: 3 PAAPLPSP 10
PAA LP P
Sbjct: 530 PAASLPLP 537
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 TGPAAPLPSP 10
TGP+ P P+P
Sbjct: 2068 TGPSVPAPAP 2077
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 TGPAAPLPSP 10
TGP+ P P+P
Sbjct: 2068 TGPSVPAPAP 2077
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 TGPAAPLPSP 10
TGP+ P P+P
Sbjct: 2071 TGPSTPRPAP 2080
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 TGPAAPLPSP 10
TGP+ P P+P
Sbjct: 2072 TGPSTPRPAP 2081
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 TGPAAPLP 8
T P+ P+P
Sbjct: 289 TAPSKPIP 296
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 1 TGPAAP 6
TGPAAP
Sbjct: 505 TGPAAP 510
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TGPAAPLPSP 10
TGP P P+P
Sbjct: 2067 TGPCTPSPAP 2076
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TGPAAPLPSP 10
TGP P P+P
Sbjct: 2067 TGPCTPSPAP 2076
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TGPAAPLPSP 10
TGP P P+P
Sbjct: 2067 TGPCTPSPAP 2076
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TGPAAPLPSP 10
TGP P P+P
Sbjct: 2067 TGPCTPSPAP 2076
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 TGPAAPLPSP 10
TGP P P+P
Sbjct: 2067 TGPCTPSPAP 2076
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TGPAAPLPSP 10
TGP P P+P
Sbjct: 2067 TGPCTPSPAP 2076
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 TGPAAPLPSP 10
TGP P P+P
Sbjct: 2067 TGPCTPSPAP 2076
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TGPAAPLPSP 10
TGP P P+P
Sbjct: 2067 TGPCTPSPAP 2076
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 1 TGPAAPLPSP 10
T PA+P SP
Sbjct: 666 TAPASPPNSP 675
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 2 GPAAPLP 8
GPA PLP
Sbjct: 1158 GPAQPLP 1164
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 TGPAAPLPS 9
TGP+ P+P+
Sbjct: 2075 TGPSTPVPA 2083
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 3 PAAPLPS 9
P AP+P+
Sbjct: 715 PGAPIPT 721
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 TGPAAPLPS 9
TGP+ P PS
Sbjct: 2072 TGPSTPAPS 2080
>sp|X_HBVC5|PROTEIN X|Hepatitis B virus genotype C
Query: 1 TGPAAPLPSP 10
+GP LPSP
Sbjct: 31 SGPFGALPSP 40
>sp|X_HBVC9|PROTEIN X|Hepatitis B virus genotype C
Query: 1 TGPAAPLPSP 10
+GP LPSP
Sbjct: 31 SGPLGDLPSP 40
>sp|X_HBVC7|PROTEIN X|Hepatitis B virus genotype C
Query: 1 TGPAAPLPSP 10
+GP LPSP
Sbjct: 31 SGPLGTLPSP 40
>sp|VL2_HPV52|MINOR capsid protein L2|Human papillomavirus 52
Query: 1 TGPAAPLPS 9
+GP PLPS
Sbjct: 405 SGPDIPLPS 413
>sp|X_HBVC3|PROTEIN X|Hepatitis B virus genotype C
Query: 1 TGPAAPLPSP 10
+GP LPSP
Sbjct: 31 SGPFGTLPSP 40
>sp|Y115_ADE02|UNCHARACTERIZED protein E-115|Human adenovirus C serotype 2
Query: 2 GPAAPLPSP 10
GPAA +P+P
Sbjct: 25 GPAARMPTP 33
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 TGPAAPLPSP 10
T P+ P+P+P
Sbjct: 2072 TSPSVPVPAP 2081
>sp|VIE1_HCMVA|IMMEDIATE early protein IE1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GPAAPLPSP 10
GP++ +P P
Sbjct: 17 GPSSKVPRP 25
>sp|VIE1_HCMVT|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 GPAAPLPSP 10
GP++ +P P
Sbjct: 17 GPSSKVPRP 25
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 3 PAAPLPSP 10
P AP+P+P
Sbjct: 1777 PEAPIPAP 1784
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 3 PAAPLPSP 10
P AP+P+P
Sbjct: 1777 PEAPIPAP 1784
8|Sequence|36|45|PLPSPKAWDV
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 3 PSPKAWD 9
P+PK+WD
Sbjct: 741 PTPKSWD 747
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 3 PSPKAWD 9
P+PK+WD
Sbjct: 741 PTPKSWD 747
>sp|TOP1_VAR67|DNA topoisomerase 1|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 PLPSPK 6
PLPSPK
Sbjct: 244 PLPSPK 249
>sp|TOP1_VACCC|DNA topoisomerase 1B|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PLPSPK 6
PLPSPK
Sbjct: 244 PLPSPK 249
>sp|TOP1_VACCA|DNA topoisomerase 1B|Vaccinia virus (strain Ankara) (VACV)
Query: 1 PLPSPK 6
PLPSPK
Sbjct: 244 PLPSPK 249
>sp|TOP1_MONPV|DNA topoisomerase I|Monkeypox virus (MPXV)
Query: 1 PLPSPK 6
PLPSPK
Sbjct: 244 PLPSPK 249
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 3 PSPKAWD 9
P+PK WD
Sbjct: 725 PNPKEWD 731
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 3 PSPKAWD 9
P+PK WD
Sbjct: 725 PNPKEWD 731
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 3 PSPKAW 8
PSP AW
Sbjct: 735 PSPDAW 740
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 3 PSPKAWD 9
P P AWD
Sbjct: 747 PRPTAWD 753
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 3 PSPKAW 8
PSP AW
Sbjct: 735 PSPDAW 740
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 3 PSPKAW 8
PSP AW
Sbjct: 735 PSPDAW 740
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 PLPSPK 6
PLP+PK
Sbjct: 751 PLPAPK 756
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 PLPSPK 6
PLP+PK
Sbjct: 751 PLPAPK 756
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 LPSPKAWD 9
LP P WD
Sbjct: 60 LPIPSMWD 67
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 LPSPKAWD 9
LP P WD
Sbjct: 60 LPIPSMWD 67
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 LPSPKAWD 9
LP P WD
Sbjct: 60 LPIPSMWD 67
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 LPSPKAWD 9
LP P WD
Sbjct: 60 LPIPSMWD 67
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 3 PSPKAWD 9
P P +WD
Sbjct: 741 PRPSSWD 747
>sp|VU25_HHV7J|PROTEIN U25|Human herpesvirus 7 (strain JI)
Query: 2 LPSPKAWDV 10
LP P+ W V
Sbjct: 30 LPFPEEWRV 38
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 LPSPKAWD 9
LP P WD
Sbjct: 60 LPIPSMWD 67
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 1 PLPSPKAW 8
P P P AW
Sbjct: 730 PEPDPTAW 737
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 PLPSPKA 7
P+P+P+A
Sbjct: 1759 PIPTPRA 1765
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 PLPSPKA 7
P+P+P+A
Sbjct: 1704 PVPAPRA 1710
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 2 LPSPKAWD 9
+PSP W+
Sbjct: 346 VPSPLNWE 353
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 2 LPSPKAWD 9
+PSP W+
Sbjct: 338 VPSPLNWE 345
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 2 LPSPKAWD 9
+PSP W+
Sbjct: 338 VPSPLNWE 345
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 2 LPSPKAWD 9
+PSP W+
Sbjct: 338 VPSPLNWE 345
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 5 PKAWDV 10
PKAW V
Sbjct: 491 PKAWQV 496
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 5 PKAWDV 10
PKAW V
Sbjct: 491 PKAWQV 496
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 3 PSPKAWD 9
P P+ WD
Sbjct: 744 PVPEKWD 750
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 3 PSPKAWD 9
P P+ WD
Sbjct: 744 PVPEKWD 750
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PSPKAWD 9
P+P WD
Sbjct: 341 PAPYTWD 347
>sp|DNLI_VACCC|DNA ligase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 SPKAWDV 10
SP A+DV
Sbjct: 168 SPNAYDV 174
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 5 PKAW 8
PKAW
Sbjct: 1646 PKAW 1649
>sp|REV_HV1S1|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 1 PLPSPKA 7
PLPSPK
Sbjct: 27 PLPSPKG 33
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 1 PLPSPKAWDV 10
P+P+P+A V
Sbjct: 428 PIPAPRAARV 437
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 PLPSPKAWD 9
PLP PK D
Sbjct: 1163 PLPDPKDID 1171
>sp|AGNO_POVJC|AGNOPROTEIN polyomavirus (JCPyV) (JCV)
Query: 2 LPSPKA 7
LP PKA
Sbjct: 65 LPEPKA 70
>sp|X_HBVC1|PROTEIN X|Hepatitis B virus genotype C
Query: 1 PLPSPKAWDV 10
PLPSP + V
Sbjct: 36 PLPSPSSSAV 45
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 3 PSPKAWD 9
P+P WD
Sbjct: 130 PNPCEWD 136
>sp|X_HBVC2|PROTEIN X|Hepatitis B virus genotype C
Query: 1 PLPSPKAWDV 10
PLPSP + V
Sbjct: 36 PLPSPSSSAV 45
>sp|X_HBVCJ|PROTEIN X|Hepatitis B virus genotype C
Query: 1 PLPSPKAWDV 10
PLPSP + V
Sbjct: 36 PLPSPSSSAV 45
9|Sequence|41|50|KAWDVVLCIS
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 KAWDVVLCIS 10
K W ++ CIS
Sbjct: 3238 KYWKILHCIS 3247
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 KAWDVVLCIS 10
K W V CIS
Sbjct: 807 KRWARVSCIS 816
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 KAWDVVLCIS 10
K W V CIS
Sbjct: 807 KRWARVSCIS 816
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 KAWDVVLCIS 10
K W V CIS
Sbjct: 807 KRWARVSCIS 816
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 KAWDVVLCIS 10
K W V CIS
Sbjct: 807 KRWARVSCIS 816
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 1 KAWDVVLCIS 10
K W V CIS
Sbjct: 808 KRWARVSCIS 817
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 KAWDVVLCIS 10
K W V CIS
Sbjct: 807 KRWARVSCIS 816
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 KAWDVVLCIS 10
+ W ++ CIS
Sbjct: 3326 RYWKILHCIS 3335
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 KAWDVVLCIS 10
K W V CIS
Sbjct: 808 KRWARVSCIS 817
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 KAWDVVLCIS 10
K W V CIS
Sbjct: 807 KRWARVSCIS 816
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 AWDVVLC 8
A+DV++C
Sbjct: 1317 AYDVIIC 1323
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 AWDVVLC 8
A+DV++C
Sbjct: 1313 AYDVIIC 1319
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 AWDVVLC 8
A+DV++C
Sbjct: 1310 AYDVIIC 1316
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 AWDVVLC 8
A+DV++C
Sbjct: 1313 AYDVIIC 1319
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 AWDVVLC 8
A+DV++C
Sbjct: 1310 AYDVIIC 1316
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 1 KAWDVVLCIS 10
K W V CIS
Sbjct: 807 KRWARVSCIS 816
>sp|VP22_HCMVM|TEGUMENT protein UL24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 KAWDVVLC 8
KAW LC
Sbjct: 115 KAWSHYLC 122
>sp|VP22_HCMVA|PROTEIN UL24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 KAWDVVLC 8
KAW LC
Sbjct: 115 KAWSHYLC 122
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 AWDVVLC 8
A+DV++C
Sbjct: 1310 AYDVIIC 1316
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 AWDVVLC 8
A+DV++C
Sbjct: 1315 AYDVIIC 1321
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 AWDVVLC 8
A+DV++C
Sbjct: 1315 AYDVIIC 1321
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 AWDVVLC 8
A+DV++C
Sbjct: 1314 AYDVIIC 1320
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 KAWDVV 6
K WDVV
Sbjct: 2821 KPWDVV 2826
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 KAWDVV 6
K WDVV
Sbjct: 2821 KPWDVV 2826
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 KAWDVV 6
K WDVV
Sbjct: 2818 KPWDVV 2823
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 KAWDVV 6
K WDVV
Sbjct: 2821 KPWDVV 2826
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 KAWDVV 6
K WDVV
Sbjct: 2821 KPWDVV 2826
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 AWDVVLC 8
A+DV++C
Sbjct: 1313 AYDVIIC 1319
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 3 WDVVLCIS 10
W V LCIS
Sbjct: 1116 WWVWLCIS 1123
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 5 VVLCIS 10
VVLC+S
Sbjct: 1239 VVLCVS 1244
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 KAWDVVLCIS 10
K WDVV ++
Sbjct: 2851 KPWDVVTGVT 2860
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 KAWDVVLCIS 10
K WDVV ++
Sbjct: 2851 KPWDVVTGVT 2860
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 KAWDVV 6
K WDVV
Sbjct: 2819 KPWDVV 2824
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 KAWDVV 6
K WDVV
Sbjct: 2819 KPWDVV 2824
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 KAWDVV 6
K WDVV
Sbjct: 2817 KPWDVV 2822
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 KAWDVV 6
K WDVV
Sbjct: 2819 KPWDVV 2824
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 KAWDVV 6
K WDVV
Sbjct: 2819 KPWDVV 2824
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 KAWDVV 6
K WDVV
Sbjct: 2819 KPWDVV 2824
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 KAWDVVLCIS 10
K WDVV ++
Sbjct: 2847 KPWDVVTGVT 2856
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 5 VVLCIS 10
VVLC+S
Sbjct: 1239 VVLCVS 1244
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 5 VVLCIS 10
VVLC+S
Sbjct: 1239 VVLCVS 1244
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 AWDVV 6
AWDVV
Sbjct: 2134 AWDVV 2138
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 AWDVVLC 8
A+D+++C
Sbjct: 1309 AYDIIMC 1315
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 KAWDVVLCIS 10
K W V C++
Sbjct: 792 KRWSRVTCVT 801
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 KAWDVVLCIS 10
K W V C++
Sbjct: 792 KRWSRVTCVT 801
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 KAWDVVLCIS 10
K W V C++
Sbjct: 792 KRWSRVTCVT 801
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 KAWDVVLCIS 10
K W V C++
Sbjct: 792 KRWSRVTCVT 801
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 KAWDVVLCIS 10
K W V C++
Sbjct: 792 KRWSRVTCVT 801
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 KAWDVVLCIS 10
K W V C++
Sbjct: 782 KRWSRVTCVT 791
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 AWDVVLC 8
A+D+++C
Sbjct: 1313 AYDIIIC 1319
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 KAWDVVLCIS 10
K W V C++
Sbjct: 781 KRWSRVTCVT 790
>sp|IR01_HCMVM|PROTEIN RL1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 WDVVLC 8
W+VV C
Sbjct: 165 WNVVRC 170
>sp|IR01_HCMVA|UNCHARACTERIZED protein HKLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 WDVVLC 8
W+VV C
Sbjct: 165 WNVVRC 170
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 KAWDVVLCIS 10
K W V C+S
Sbjct: 807 KRWARVSCVS 816
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 KAWDVVLCIS 10
K W V C+S
Sbjct: 807 KRWARVSCVS 816
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 KAWDVVLCIS 10
K W V C+S
Sbjct: 807 KRWARVSCVS 816
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 KAWDVVLCIS 10
K W V C++
Sbjct: 792 KRWSRVTCVT 801
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 KAWDVVLCIS 10
K W V C++
Sbjct: 792 KRWSRVTCVT 801
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 AWDVVLC 8
A+D+++C
Sbjct: 1311 AYDIIIC 1317
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 AWDVVLC 8
A+D+++C
Sbjct: 1307 AYDIIIC 1313
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 AWDVVLC 8
A+D+++C
Sbjct: 1313 AYDIIIC 1319
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 AWDVVLC 8
A+D+++C
Sbjct: 1309 AYDIIIC 1315
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 AWDVVLC 8
A+D+++C
Sbjct: 1309 AYDIIIC 1315
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 AWDVVLC 8
A+D+++C
Sbjct: 1313 AYDIIIC 1319
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 AWDVVLC 8
A+D+++C
Sbjct: 1313 AYDIIIC 1319
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 AWDVVLC 8
A+D+++C
Sbjct: 1309 AYDIIIC 1315
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 AWDVVLC 8
A+D+++C
Sbjct: 1309 AYDIIIC 1315
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 AWDVVLC 8
A+D+++C
Sbjct: 1309 AYDIIIC 1315
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 AWDVVLC 8
A+D+++C
Sbjct: 1309 AYDIIIC 1315
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 AWDVVLC 8
A+D+++C
Sbjct: 1314 AYDIIIC 1320
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 AWDVVLC 8
A+D+++C
Sbjct: 1309 AYDIIIC 1315
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 AWDVVLC 8
A+D+++C
Sbjct: 1313 AYDIIIC 1319
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 AWDVVLC 8
A+D+++C
Sbjct: 1309 AYDIIIC 1315
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 AWDVVLC 8
A+D+++C
Sbjct: 1314 AYDIIIC 1320
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 KAWDVV 6
K WDV+
Sbjct: 2821 KPWDVI 2826
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 AWDVVLC 8
A+D+++C
Sbjct: 1309 AYDIIIC 1315
>sp|VP3_ROTHP|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/P/1974/G3P1A[8])
Query: 2 AWDVV 6
AWD++
Sbjct: 415 AWDII 419
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 AWDVVLC 8
A+D+++C
Sbjct: 1309 AYDIIIC 1315
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 AWDVVLC 8
A+D+++C
Sbjct: 1309 AYDIIIC 1315
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 AWDVVLC 8
A+D+++C
Sbjct: 1309 AYDIIIC 1315
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 KAWDVV 6
K WDV+
Sbjct: 2817 KPWDVI 2822
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 KAWDVV 6
K WDV+
Sbjct: 2817 KPWDVI 2822
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 KAWDVV 6
K WDV+
Sbjct: 2817 KPWDVI 2822
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 KAWDVV 6
K WDV+
Sbjct: 2817 KPWDVI 2822
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 KAWDVV 6
K WDV+
Sbjct: 2822 KPWDVI 2827
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 KAWDVV 6
K WDV+
Sbjct: 2822 KPWDVI 2827
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 AWDVV 6
AWDV+
Sbjct: 156 AWDVI 160
>sp|OBP_HHV6Z|REPLICATION origin-binding protein|Human herpesvirus 6B (strain Z29)
Query: 3 WDVVLCI 9
WD LC+
Sbjct: 234 WDKKLCL 240
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 KAWDVVLCIS 10
+ W +V+C++
Sbjct: 4 RIWCLVVCVN 13
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 KAWDVVLCIS 10
+ W +V+C++
Sbjct: 4 RIWCLVVCVN 13
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 KAWDVVLCIS 10
+ W +V+C++
Sbjct: 4 RIWCLVVCVN 13
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 5 VVLCIS 10
+VLC+S
Sbjct: 1238 IVLCVS 1243
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 5 VVLCIS 10
+VLC+S
Sbjct: 1238 IVLCVS 1243
>sp|OBP_HHV6U|REPLICATION origin-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 WDVVLCI 9
WD LC+
Sbjct: 234 WDKKLCL 240
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 5 VVLCIS 10
+VLC+S
Sbjct: 1238 IVLCVS 1243
10|Sequence|46|55|VLCISGTLVS
>sp|CAPSD_HEVCH|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 VLCISGTLVS 10
+LCI G+LV+
Sbjct: 277 MLCIHGSLVN 286
>sp|CAPSD_HEVBU|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 VLCISGTLVS 10
+LCI G+LV+
Sbjct: 277 MLCIHGSLVN 286
>sp|US15_HCMVM|MEMBRANE protein US15|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LCISGTLV 9
LC+ GTLV
Sbjct: 127 LCLDGTLV 134
>sp|US15_HCMVA|UNCHARACTERIZED protein HVLF3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LCISGTLV 9
LC+ GTLV
Sbjct: 127 LCLDGTLV 134
>sp|HEMA_CVHOC|HEMAGGLUTININ-ESTERASE coronavirus OC43 (HCoV-OC43)
Query: 2 LCISGTLV 9
LC SG+LV
Sbjct: 161 LCKSGSLV 168
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 VLCISG 6
V+CISG
Sbjct: 2352 VICISG 2357
>sp|CVC1_HHV7J|CAPSID vertex component 1|Human herpesvirus 7 (strain JI)
Query: 2 LCISGTL 8
C+SGT
Sbjct: 416 FCVSGTF 422
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 VLCISGT 7
+LC+ GT
Sbjct: 1567 LLCVKGT 1573
>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)
Query: 5 SGTLVS 10
SGTLVS
Sbjct: 122 SGTLVS 127
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 3 CISGTL 8
CI+GT+
Sbjct: 835 CINGTM 840
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 CISGTL 8
CI+GT+
Sbjct: 1158 CINGTM 1163
>sp|VE1_HPV6B|REPLICATION protein E1|Human papillomavirus type 6b
Query: 3 CISGTLV 9
C+ GT+V
Sbjct: 640 CVPGTVV 646
>sp|VE1_HPV6A|REPLICATION protein E1|Human papillomavirus type 6a
Query: 3 CISGTLV 9
C+ GT+V
Sbjct: 640 CVPGTVV 646
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 3 CISGTLV 9
C+ GT+V
Sbjct: 634 CVPGTVV 640
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 3 CISGTLV 9
C+ GT+V
Sbjct: 634 CVPGTVV 640
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 3 CISGTLV 9
C+ GT+V
Sbjct: 633 CVPGTVV 639
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 3 CISGTLV 9
C+ GT+V
Sbjct: 637 CVPGTVV 643
11|Sequence|51|60|GTLVSCENAL
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 GTLVSCE 7
GT+VSCE
Sbjct: 275 GTIVSCE 281
>sp|PG181_MONPV|PROTEIN OPG181|Monkeypox virus (MPXV)
Query: 1 GTLVSCENAL 10
G +V C NAL
Sbjct: 3 GVIVYCLNAL 12
>sp|GM_VZVO|ENVELOPE glycoprotein M|Varicella-zoster virus (strain Oka vaccine)
Query: 1 GTLVSC 6
GTLV+C
Sbjct: 305 GTLVAC 310
>sp|GM_VZVD|ENVELOPE glycoprotein M|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 GTLVSC 6
GTLV+C
Sbjct: 305 GTLVAC 310
>sp|PG181_VACCC|PROTEIN OPG181|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 GTLVSCENAL 10
G +V C NAL
Sbjct: 3 GVIVYCLNAL 12
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 LVSCENAL 10
LVSC+N +
Sbjct: 1117 LVSCDNLI 1124
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 TLVSCE 7
T+VSCE
Sbjct: 279 TIVSCE 284
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 2 TLVSCE 7
T+VSCE
Sbjct: 276 TIVSCE 281
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 TLVSCE 7
T+VSCE
Sbjct: 278 TIVSCE 283
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 2 TLVSCE 7
T+VSCE
Sbjct: 278 TIVSCE 283
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 TLVSCE 7
T+VSCE
Sbjct: 276 TIVSCE 281
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 TLVSCE 7
T+VSCE
Sbjct: 276 TIVSCE 281
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 2 TLVSCE 7
T+VSCE
Sbjct: 276 TIVSCE 281
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 TLVSCE 7
T+VSCE
Sbjct: 278 TIVSCE 283
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 TLVSCE 7
T+VSCE
Sbjct: 278 TIVSCE 283
>sp|PG181_VARV|PROTEIN OPG181|Variola virus
Query: 1 GTLVSCENAL 10
G +V C NAL
Sbjct: 3 GVIVYCLNAL 12
>sp|PG181_VAR67|PROTEIN OPG181|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 GTLVSCENAL 10
G +V C NAL
Sbjct: 3 GVIVYCLNAL 12
>sp|PG181_VACCA|PROTEIN OPG181|Vaccinia virus (strain Ankara) (VACV)
Query: 1 GTLVSCENAL 10
G +V C NAL
Sbjct: 3 GVIVYCLNAL 12
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 GTLVSCENAL 10
GT+ +C N++
Sbjct: 5802 GTVATCYNSV 5811
12|Sequence|56|65|CENALVVAII
***** No hits found ******
13|Sequence|61|70|VVAIIVGTPA
>sp|NSP1N_ROTJ1|NON-STRUCTURAL protein 1|Rotavirus X (strain
Query: 1 VVAIIVGTP 9
V A I+GTP
Sbjct: 164 VAATIIGTP 172
>sp|NSP1N_ROTB2|NON-STRUCTURAL protein 1|Rotavirus X (isolate
Query: 1 VVAIIVGTP 9
V A I+GTP
Sbjct: 164 VAATIIGTP 172
>sp|NSP3_ROTHC|NON-STRUCTURAL protein 3|Rotavirus C (isolate RVC/Human/United
Query: 1 VVAIIVGTP 9
+V+ I+GTP
Sbjct: 208 LVSTILGTP 216
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VVAIIVGTP 9
V+ I+VG P
Sbjct: 1113 VMGIVVGQP 1121
>sp|NPH2_VARV|RNA helicase NPH-II|Variola virus
Query: 2 VAIIVGTP 9
V+II+ TP
Sbjct: 444 VSIIISTP 451
>sp|NPH2_VACCT|RNA helicase NPH-II|Vaccinia virus (strain Tian Tan)
Query: 2 VAIIVGTP 9
V+II+ TP
Sbjct: 444 VSIIISTP 451
>sp|NPH2_VACCC|RNA helicase NPH-II|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 VAIIVGTP 9
V+II+ TP
Sbjct: 444 VSIIISTP 451
>sp|NPH2_VACCA|RNA helicase NPH-II|Vaccinia virus (strain Ankara) (VACV)
Query: 2 VAIIVGTP 9
V+II+ TP
Sbjct: 444 VSIIISTP 451
>sp|NPH2_MONPV|RNA helicase NPH-II|Monkeypox virus (MPXV)
Query: 2 VAIIVGTP 9
V+II+ TP
Sbjct: 444 VSIIISTP 451
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 VVAIIVGTP 9
V A +VGTP
Sbjct: 774 VEAPLVGTP 782
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 VVAIIVGTP 9
V A +VGTP
Sbjct: 774 VEAPLVGTP 782
14|Sequence|66|75|VGTPAFRAPM
>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68
Query: 1 VGTPAFRAPM 10
VG P F+ PM
Sbjct: 45 VGHPYFKVPM 54
>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180
Query: 1 VGTPAFRAPM 10
VG P F+ PM
Sbjct: 45 VGHPYFKVPM 54
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 1 VGTPAFRAP 9
VG P FR P
Sbjct: 106 VGNPYFRVP 114
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TPAFRAPM 10
TP FR P+
Sbjct: 969 TPKFRLPI 976
>sp|NRAM_I85A3|NEURAMINIDASE A virus (strain A/Chicken/Victoria/1/1985
Query: 4 PAFRAP 9
P FRAP
Sbjct: 76 PEFRAP 81
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TPAFRAPM 10
TP FR P+
Sbjct: 979 TPKFRLPI 986
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TPAFRAPM 10
TP FR P+
Sbjct: 978 TPKFRLPI 985
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TPAFRAPM 10
TP FR P+
Sbjct: 970 TPKFRLPI 977
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TPAFRAPM 10
TP FR P+
Sbjct: 968 TPKFRLPI 975
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TPAFRAPM 10
TP FR P+
Sbjct: 974 TPKFRLPI 981
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TPAFRAPM 10
TP FR P+
Sbjct: 970 TPKFRLPI 977
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TPAFRAPM 10
TP FR P+
Sbjct: 973 TPKFRLPI 980
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TPAFRAPM 10
TP FR P+
Sbjct: 968 TPKFRLPI 975
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TPAFRAPM 10
TP FR P+
Sbjct: 968 TPKFRLPI 975
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 VGTPAFR 7
+G+P FR
Sbjct: 1538 IGSPGFR 1544
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TPAFRAPM 10
TP FR P+
Sbjct: 977 TPKFRLPI 984
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 TPAFRAPM 10
TP FR P+
Sbjct: 983 TPKFRLPV 990
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 2 GTPAFRAPM 10
GTP R P+
Sbjct: 841 GTPTLRQPL 849
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 2 GTPAFRAPM 10
GTP R P+
Sbjct: 841 GTPTLRQPL 849
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 2 GTPAFRAPM 10
GTP R P+
Sbjct: 841 GTPTLRQPL 849
>sp|MC160_MCV1|PROTEIN MC160|Molluscum contagiosum virus subtype 1
Query: 1 VGTPAFRAPM 10
VGTP PM
Sbjct: 179 VGTPVQDEPM 188
15|Sequence|71|80|FRAPMFLLVG
>sp|NRAM_I85A3|NEURAMINIDASE A virus (strain A/Chicken/Victoria/1/1985
Query: 1 FRAPMFLLV 9
FRAP +LL+
Sbjct: 78 FRAPSYLLL 86
>sp|TRM3_HHV6Z|TRIPARTITE terminase subunit 3|Human herpesvirus 6B (strain Z29)
Query: 1 FRAPMFLLV 9
+R P+FL +
Sbjct: 117 YREPLFLQI 125
>sp|TRM3_HHV6U|TRIPARTITE terminase subunit 3|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 FRAPMFLLV 9
+R P+FL +
Sbjct: 117 YREPLFLQI 125
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 4 PMFLLVG 10
P+F L+G
Sbjct: 2384 PLFCLIG 2390
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 4 PMFLLVG 10
P+F L+G
Sbjct: 2414 PLFCLIG 2420
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 PMFLLVG 10
P+F L+G
Sbjct: 2364 PLFCLIG 2370
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 PMFLLVG 10
P+F L+G
Sbjct: 2384 PLFCLIG 2390
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 PMFLLVG 10
P+F L+G
Sbjct: 2414 PLFCLIG 2420
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 4 PMFLLVG 10
P+F L+G
Sbjct: 2364 PLFCLIG 2370
>sp|GG_HHV2H|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain HG52)
Query: 3 APMFLLVG 10
AP LLVG
Sbjct: 270 APQSLLVG 277
>sp|GG_HHV2B|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain B4327UR)
Query: 3 APMFLLVG 10
AP LLVG
Sbjct: 270 APQSLLVG 277
16|Sequence|76|85|FLLVGSLAVA
>sp|VIL6_HHV8P|VIRAL interleukin-6 homolog|Human herpesvirus 8 type P
Query: 2 LLVGSLAVA 10
LLVGSL V+
Sbjct: 10 LLVGSLLVS 18
17|Sequence|81|90|SLAVADLLAG
>sp|US27_HCMVM|ENVELOPE glycoprotein US27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SLAVADLL 8
+LAVADLL
Sbjct: 74 NLAVADLL 81
>sp|US27_HCMVA|G-PROTEIN coupled receptor homolog US27|Human cytomegalovirus (strain
Query: 1 SLAVADLL 8
+LAVADLL
Sbjct: 72 NLAVADLL 79
>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959
Query: 1 SLAVADLLAG 10
SLA+A ++AG
Sbjct: 538 SLALAIMIAG 547
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 VADLLAG 10
+AD LAG
Sbjct: 5762 IADFLAG 5768
>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 SLAVADLLAG 10
SLA+A ++AG
Sbjct: 542 SLALAIMVAG 551
>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 SLAVADLLAG 10
SLA+A ++AG
Sbjct: 542 SLALAIMVAG 551
>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996
Query: 1 SLAVADLLAG 10
SLA+A ++AG
Sbjct: 542 SLALAIMVAG 551
>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003
Query: 1 SLAVADLLAG 10
SLA+A ++AG
Sbjct: 542 SLALAIMVAG 551
>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 SLAVADLLAG 10
SLA+A ++AG
Sbjct: 542 SLALAIMVAG 551
>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 SLAVADLLAG 10
SLA+A ++AG
Sbjct: 534 SLALAIMVAG 543
>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 SLAVADLLAG 10
SLA+A ++AG
Sbjct: 542 SLALAIMVAG 551
>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky
Query: 1 SLAVADLLAG 10
SLA+A ++AG
Sbjct: 542 SLALAIMVAG 551
>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 SLAVADLLAG 10
SLA+A ++AG
Sbjct: 542 SLALAIMVAG 551
>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 SLAVADLLAG 10
SLA+A ++AG
Sbjct: 542 SLALAIMVAG 551
>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea
Query: 1 SLAVADLLAG 10
SLA+A ++AG
Sbjct: 540 SLALAIMVAG 549
>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 SLAVADLLAG 10
SLA+A ++AG
Sbjct: 531 SLALAIMVAG 540
>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 SLAVADLLAG 10
SLA+A ++AG
Sbjct: 531 SLALAIMVAG 540
>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky
Query: 1 SLAVADLLAG 10
SLA+A ++AG
Sbjct: 531 SLALAIMVAG 540
>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 1 SLAVADLLAG 10
SLA+A ++AG
Sbjct: 542 SLALAIMVAG 551
18|Sequence|86|95|DLLAGLGLVL
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 DLLAGLG 7
DL++GLG
Sbjct: 714 DLMSGLG 720
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DLLAGLG 7
DL++GLG
Sbjct: 714 DLMSGLG 720
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DLLAGLG 7
DL++GLG
Sbjct: 713 DLMSGLG 719
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 2 LLAGLGLVL 10
++ G+GLVL
Sbjct: 343 VMGGIGLVL 351
>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 LAGLGL 8
LAGLGL
Sbjct: 174 LAGLGL 179
>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 LAGLGL 8
LAGLGL
Sbjct: 174 LAGLGL 179
>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 LAGLGL 8
LAGLGL
Sbjct: 174 LAGLGL 179
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 AGLGLV 9
AGLGLV
Sbjct: 2227 AGLGLV 2232
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 4 AGLGLV 9
AGLGLV
Sbjct: 2200 AGLGLV 2205
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 4 AGLGLV 9
AGLGLV
Sbjct: 2205 AGLGLV 2210
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 DLLAGLGLV 9
D+L GLG V
Sbjct: 2115 DILTGLGGV 2123
>sp|PG079_MONPV|PROTEIN OPG079|Monkeypox virus (MPXV)
Query: 1 DLLAGLGLV 9
DL+ LGLV
Sbjct: 242 DLVRNLGLV 250
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 LLAGLGL 8
+LAG+GL
Sbjct: 1365 VLAGMGL 1371
>sp|NSP1A_ROTGI|NON-STRUCTURAL protein 1, peptide 1|Rotavirus B (isolate RVB/Rat/United
Query: 2 LLAGLGLVL 10
L+AG+G+++
Sbjct: 41 LVAGVGIIV 49
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 DLLAGLG 7
D+LAG G
Sbjct: 1848 DILAGYG 1854
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 DLLAGLG 7
D+LAG G
Sbjct: 1856 DILAGYG 1862
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 DLLAGLG 7
D+LAG G
Sbjct: 1856 DILAGYG 1862
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 DLLAGLG 7
D+LAG G
Sbjct: 1854 DILAGYG 1860
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 DLLAGLG 7
D+LAG G
Sbjct: 1854 DILAGYG 1860
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 DLLAGLG 7
D+LAG G
Sbjct: 1854 DILAGYG 1860
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 DLLAGLG 7
D+LAG G
Sbjct: 1851 DILAGYG 1857
19|Sequence|91|100|LGLVLHFAAV
>sp|YORF2_TTVV9|UNCHARACTERIZED ORF2 protein|Torque teno virus (isolate Japanese
Query: 1 LGLVLHFAA 9
LGL+LH A
Sbjct: 40 LGLLLHSAG 48
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 LGLVLHF 7
LGL+ HF
Sbjct: 1924 LGLISHF 1930
>sp|VE2_HPV49|REGULATORY protein E2|Human papillomavirus type 49
Query: 1 LGLVLHFA 8
LGLV H++
Sbjct: 429 LGLVKHYS 436
20|Sequence|96|105|HFAAVFCIGS
>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain Merlin)
Query: 1 HFAAVFC 7
H AAVFC
Sbjct: 162 HHAAVFC 168
>sp|VGLI_HCMVA|UL37 immediate early glycoprotein|Human cytomegalovirus (strain AD169)
Query: 1 HFAAVFC 7
H AAVFC
Sbjct: 162 HHAAVFC 168
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 FAAVFCI 8
FAA FCI
Sbjct: 641 FAACFCI 647
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 1 HFAAVFC 7
HF AV C
Sbjct: 73 HFGAVLC 79
>sp|KITH_VZVO|THYMIDINE kinase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 HFAAVFC 7
HF ++FC
Sbjct: 88 HFQSLFC 94
>sp|KITH_VZVD|THYMIDINE kinase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 HFAAVFC 7
HF ++FC
Sbjct: 88 HFQSLFC 94
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 1 HFAAVFC 7
HF A+ C
Sbjct: 73 HFGAILC 79
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 2 FAAVFCIG 9
AA+FC G
Sbjct: 778 LAALFCCG 785
>sp|NTP1_YMTV5|NUCLEOSIDE triphosphatase I|Yaba monkey tumor virus (strain
Query: 2 FAAVFCIGS 10
+ +VFCI S
Sbjct: 400 YFSVFCITS 408
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 1 HFAAVFC 7
HF V+C
Sbjct: 462 HFLNVYC 468
>sp|ORF0_VZVO|MEMBRANE protein 0|Varicella-zoster virus (strain Oka vaccine)
Query: 4 AVFCIGS 10
A+FCI S
Sbjct: 213 ALFCISS 219
>sp|GM_HHV11|ENVELOPE glycoprotein M|Human herpesvirus 1 (strain 17)
Query: 1 HFAAVFC 7
+FAA FC
Sbjct: 178 YFAAHFC 184
21|Sequence|101|110|FCIGSAEMSL
>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)
Query: 1 FCIGSAE 7
+C GSAE
Sbjct: 421 YCFGSAE 427
>sp|NCAP_BUNL8|NUCLEOPROTEIN La Crosse (isolate Human/United
Query: 1 FCIGSAEM 8
FC+ +AE+
Sbjct: 26 FCVKNAEL 33
22|Sequence|106|115|AEMSLVLVGV
>sp|PG091_MONPV|PROTEIN OPG091|Monkeypox virus (MPXV)
Query: 1 AEMSLVLVGV 10
A+MSL L+G+
Sbjct: 89 ADMSLTLLGI 98
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 3 MSLVLVGV 10
MS++LVGV
Sbjct: 760 MSMILVGV 767
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 MSLVLVGV 10
+SLVLVGV
Sbjct: 757 VSLVLVGV 764
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 3 MSLVLVGV 10
MS++LVGV
Sbjct: 760 MSMILVGV 767
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 3 MSLVLVGV 10
MS++LVGV
Sbjct: 760 MSMILVGV 767
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 3 MSLVLVGV 10
MS++LVGV
Sbjct: 760 MSMILVGV 767
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 3 MSLVLVGV 10
MS++LVGV
Sbjct: 760 MSMILVGV 767
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 3 MSLVLVGV 10
MS++LVGV
Sbjct: 760 MSMILVGV 767
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 MSLVLVGV 10
MS++LVGV
Sbjct: 760 MSMILVGV 767
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 3 MSLVLVGV 10
MS++LVGV
Sbjct: 760 MSMILVGV 767
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 3 MSLVLVGV 10
MS++LVGV
Sbjct: 760 MSMILVGV 767
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 MSLVLVGV 10
MS++LVGV
Sbjct: 760 MSMILVGV 767
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 MSLVLVGV 10
+SLVLVG+
Sbjct: 757 VSLVLVGI 764
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 3 MSLVLVGV 10
+SLVLVG+
Sbjct: 757 VSLVLVGI 764
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 MSLVLVGV 10
+SLVLVG+
Sbjct: 477 VSLVLVGI 484
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 MSLVLVGV 10
+SLVLVG+
Sbjct: 757 VSLVLVGI 764
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 MSLVLVGV 10
+SLVLVG+
Sbjct: 657 VSLVLVGI 664
>sp|POLG_DEN2H|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 MSLVLVGV 10
+SLVLVG+
Sbjct: 526 VSLVLVGI 533
>sp|POLG_DEN22|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 3 MSLVLVGV 10
+SLVLVG+
Sbjct: 477 VSLVLVGI 484
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 MSLVLVGV 10
++LVLVG+
Sbjct: 757 VTLVLVGI 764
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 MSLVLVGV 10
++LVLVG+
Sbjct: 757 VTLVLVGI 764
>sp|VGLG_HMPVC|MAJOR surface glycoprotein G|Human metapneumovirus (strain CAN97-83)
Query: 4 SLVLVGV 10
SL+L+G+
Sbjct: 32 SLILIGI 38
23|Sequence|111|120|VLVGVLAMAF
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 VLVGVLAM 8
+LVGV+ M
Sbjct: 763 ILVGVIMM 770
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 VLVGVLAM 8
+LVGV+ M
Sbjct: 763 ILVGVIMM 770
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 VLVGVLAM 8
+LVGV+ M
Sbjct: 763 ILVGVIMM 770
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 VLVGVLAM 8
+LVGV+ M
Sbjct: 763 ILVGVIMM 770
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 VLVGVLAM 8
+LVGV+ M
Sbjct: 763 ILVGVIMM 770
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 VLVGVLAM 8
+LVGV+ M
Sbjct: 763 ILVGVIMM 770
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 VLVGVLAM 8
+LVGV+ M
Sbjct: 763 ILVGVIMM 770
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 VLVGVLAM 8
+LVGV+ M
Sbjct: 763 ILVGVIMM 770
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 1 VLVGVLAM 8
+LVGV+ M
Sbjct: 763 ILVGVIMM 770
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 VLVGVLAM 8
+LVGV+ M
Sbjct: 763 ILVGVIMM 770
24|Sequence|116|125|LAMAFTASIG
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 MAFTASI 9
MAFTASI
Sbjct: 1791 MAFTASI 1797
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 MAFTASI 9
MAFTASI
Sbjct: 1791 MAFTASI 1797
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 MAFTASI 9
MAFTASI
Sbjct: 1791 MAFTASI 1797
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 MAFTASI 9
MAFTASI
Sbjct: 1791 MAFTASI 1797
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 MAFTASI 9
MAFTASI
Sbjct: 1791 MAFTASI 1797
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 MAFTASI 9
MAFTASI
Sbjct: 1791 MAFTASI 1797
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 MAFTASI 9
MAFTASI
Sbjct: 1791 MAFTASI 1797
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 3 MAFTASI 9
MAFTAS+
Sbjct: 1799 MAFTASV 1805
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 MAFTASI 9
MAFTAS+
Sbjct: 1797 MAFTASV 1803
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 MAFTASI 9
MAFTAS+
Sbjct: 1796 MAFTASV 1802
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 MAFTASI 9
MAFTAS+
Sbjct: 1797 MAFTASV 1803
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 MAFTASI 9
M+FTAS+
Sbjct: 1795 MSFTASL 1801
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 MAFTASI 9
M+FTAS+
Sbjct: 1796 MSFTASL 1802
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 3 MAFTASI 9
M+FTAS+
Sbjct: 1796 MSFTASL 1802
25|Sequence|121|130|TASIGSLLAI
***** No hits found ******
26|Sequence|126|135|SLLAITVDRY
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 SLLAITVD 8
SLL +T+D
Sbjct: 196 SLLPVTID 203
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 SLLAITVD 8
SLL +T+D
Sbjct: 196 SLLPVTID 203
27|Sequence|131|140|TVDRYLSLYN
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 DRYLSLYN 10
+RYLSLYN
Sbjct: 3187 NRYLSLYN 3194
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 DRYLSLYN 10
+RYLSLYN
Sbjct: 3225 NRYLSLYN 3232
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 DRYLSLYN 10
+RYLSLYN
Sbjct: 3245 NRYLSLYN 3252
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 DRYLSLYN 10
+RYLSLYN
Sbjct: 3187 NRYLSLYN 3194
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 DRYLSLYN 10
+RYLSLYN
Sbjct: 3275 NRYLSLYN 3282
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 DRYLSLYN 10
+RYLSLYN
Sbjct: 3225 NRYLSLYN 3232
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 DRYLSLYN 10
+RYLSLYN
Sbjct: 3275 NRYLSLYN 3282
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 DRYLSLYN 10
+RYLSLYN
Sbjct: 3245 NRYLSLYN 3252
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 DRYLSLYN 10
+RYL+LYN
Sbjct: 3205 NRYLALYN 3212
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 DRYLSLYN 10
+RYL+LYN
Sbjct: 3182 NRYLALYN 3189
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 DRYLSLYN 10
+RYL+LYN
Sbjct: 3205 NRYLALYN 3212
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 DRYLSLYN 10
+RYL+LYN
Sbjct: 3182 NRYLALYN 3189
>sp|PB2_INCBE|POLYMERASE basic protein 2|Influenza C virus (strain C/Berlin/1/1985)
Query: 5 YLSLYN 10
YLSLYN
Sbjct: 591 YLSLYN 596
>sp|PB2_INCAA|POLYMERASE basic protein 2|Influenza C virus (strain C/Ann
Query: 5 YLSLYN 10
YLSLYN
Sbjct: 591 YLSLYN 596
>sp|PB2_INCJJ|POLYMERASE basic protein 2|Influenza C virus (strain C/JJ/1950)
Query: 5 YLSLYN 10
YLSLYN
Sbjct: 591 YLSLYN 596
>sp|PB2_INCJH|POLYMERASE basic protein 2|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 5 YLSLYN 10
YLSLYN
Sbjct: 591 YLSLYN 596
>sp|TRX2_EBVB9|TRIPLEX capsid protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 TVDRYLSLYN 10
TV Y+S+YN
Sbjct: 53 TVPDYVSMYN 62
>sp|ETF2_MCV1|EARLY transcription factor 82 kDa|Molluscum contagiosum virus subtype 1
Query: 4 RYLSLY 9
RYLSLY
Sbjct: 22 RYLSLY 27
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 4 RYLSLYN 10
RY SL+N
Sbjct: 350 RYFSLWN 356
>sp|NSP2_ROTGA|NON-STRUCTURAL protein 2|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)
Query: 2 VDRYLS 7
+DRYLS
Sbjct: 28 LDRYLS 33
>sp|U20_HHV6Z|GLYCOPROTEIN U20|Human herpesvirus 6B (strain Z29)
Query: 1 TVDRYL 6
TVDR+L
Sbjct: 80 TVDRFL 85
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 4 RYLSLY 9
RYLS+Y
Sbjct: 567 RYLSIY 572
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate
Query: 4 RYLSLY 9
RYLS+Y
Sbjct: 567 RYLSIY 572
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 RYLSLY 9
RYLS+Y
Sbjct: 567 RYLSIY 572
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 4 RYLSLY 9
RYLS+Y
Sbjct: 567 RYLSIY 572
>sp|U20_HHV6U|GLYCOPROTEIN U20|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 TVDRYLS 7
TVDR+L
Sbjct: 80 TVDRFLG 86
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 4 RYLSLY 9
RYLS+Y
Sbjct: 567 RYLSIY 572
28|Sequence|136|145|LSLYNALTYY
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LSLYNALTYY 10
LSLYN YY
Sbjct: 3190 LSLYNKYRYY 3199
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 LSLYNALTYY 10
LSLYN YY
Sbjct: 3278 LSLYNKYRYY 3287
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 LSLYNALTYY 10
LSLYN YY
Sbjct: 3248 LSLYNKYRYY 3257
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 LSLYNALTYY 10
LSLYN YY
Sbjct: 3228 LSLYNKYRYY 3237
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LSLYNALTYY 10
LSLYN YY
Sbjct: 3190 LSLYNKYRYY 3199
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 LSLYNALTYY 10
LSLYN YY
Sbjct: 3278 LSLYNKYRYY 3287
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 LSLYNALTYY 10
LSLYN YY
Sbjct: 3228 LSLYNKYRYY 3237
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 LSLYNALTYY 10
LSLYN YY
Sbjct: 3248 LSLYNKYRYY 3257
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 SLYNAL 7
SLYNAL
Sbjct: 77 SLYNAL 82
>sp|GAG_HV1YF|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 SLYNAL 7
SLYNAL
Sbjct: 77 SLYNAL 82
>sp|VP3_ROTYO|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8]) (RV-A)
Query: 3 LYNALTYY 10
+YNAL YY
Sbjct: 613 VYNALIYY 620
>sp|VP3_ROTHW|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8])
Query: 3 LYNALTYY 10
+YNAL YY
Sbjct: 613 VYNALIYY 620
>sp|VP3_ROTAD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/D/1974/G1P1A[8])
Query: 3 LYNALTYY 10
+YNAL YY
Sbjct: 613 VYNALIYY 620
>sp|VP3_ROTHS|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4]) (RV-A)
Query: 3 LYNALTYY 10
+YNAL YY
Sbjct: 613 VYNALIYY 620
>sp|VP3_ROTH7|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 3 LYNALTYY 10
+YNAL YY
Sbjct: 613 VYNALIYY 620
>sp|VP3_ROTH6|PROTEIN VP3|Rotavirus A (strain RVA/Human/Indonesia/69M/1980/G8P4[10])
Query: 3 LYNALTYY 10
+YNAL YY
Sbjct: 613 VYNALIYY 620
>sp|VP3_ROTH3|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9]) (RV-A)
Query: 3 LYNALTYY 10
+YNAL YY
Sbjct: 613 VYNALIYY 620
>sp|VP3_ROTWI|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 3 LYNALTYY 10
+YNAL YY
Sbjct: 613 VYNALIYY 620
>sp|VP3_ROTHD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/DS-1/1976/G2P1B[4])
Query: 3 LYNALTYY 10
+YNAL YY
Sbjct: 613 VYNALIYY 620
>sp|VP3_ROTHT|PROTEIN VP3|Rotavirus A (strain RVA/Human/United Kingdom/ST3/1975/G4P2A[6])
Query: 3 LYNALTYY 10
+YNAL YY
Sbjct: 613 VYNALIYY 620
>sp|VP3_ROTHL|PROTEIN VP3|Rotavirus A (strain RVA/Human/Philippines/L26/1987/G12P1B[4])
Query: 3 LYNALTYY 10
+YNAL YY
Sbjct: 613 VYNALIYY 620
>sp|VP3_ROTHU|PROTEIN VP3|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11]) (RV-A)
Query: 3 LYNALTYY 10
+YNAL YY
Sbjct: 613 VYNALIYY 620
>sp|VP3_ROTHP|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/P/1974/G3P1A[8])
Query: 3 LYNALTYY 10
+YNAL YY
Sbjct: 613 VYNALIYY 620
>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)
Query: 3 LYNALTYY 10
+YNAL YY
Sbjct: 613 VYNALIYY 620
>sp|VP3_ROT41|PROTEIN VP3|Rotavirus A (isolate RVA/Human/Belgium/B4106/2000/G3P11[14])
Query: 3 LYNALTYY 10
+YNAL YY
Sbjct: 613 VYNALIYY 620
>sp|Y15K_HBVD3|PUTATIVE uncharacterized 15.3 kDa protein|Hepatitis B virus genotype D
Query: 4 YNALTYY 10
+N+LTY+
Sbjct: 90 HNSLTYF 96
>sp|VGP3_EBVP3|ENVELOPE glycoprotein GP340|Epstein-Barr virus (strain P3HR-1) (HHV-4)
Query: 4 YNALTY 9
YNA TY
Sbjct: 793 YNATTY 798
>sp|GP350_EBVG|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 YNALTY 9
YNA TY
Sbjct: 763 YNATTY 768
>sp|GP350_EBVB9|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 YNALTY 9
YNA TY
Sbjct: 814 YNATTY 819
>sp|GP350_EBVA8|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 YNALTY 9
YNA TY
Sbjct: 793 YNATTY 798
>sp|TEG4_VZVO|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 4 YNALTYY 10
YN +T+Y
Sbjct: 11 YNGVTFY 17
>sp|TEG4_VZVD|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Dumas)
Query: 4 YNALTYY 10
YN +T+Y
Sbjct: 11 YNGVTFY 17
>sp|PG187_MONPV|B1 kinase|Monkeypox virus (MPXV)
Query: 1 LSLYNALTYY 10
+++ N+LTY+
Sbjct: 273 ITMVNSLTYF 282
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 LSLYNALTYY 10
+SL+ +TY+
Sbjct: 3016 VSLFQPITYF 3025
29|Sequence|141|150|ALTYYSETTV
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 ALTYYSETT 9
ALTYY T+
Sbjct: 949 ALTYYLHTS 957
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 ALTYYSETT 9
ALTYY T+
Sbjct: 949 ALTYYLHTS 957
30|Sequence|146|155|SETTVTRTYV
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 1 SETTVT 6
SETTVT
Sbjct: 1254 SETTVT 1259
31|Sequence|151|160|TRTYVMLALV
***** No hits found ******
32|Sequence|156|165|MLALVWGGAL
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 4 LVWGGAL 10
++WGG L
Sbjct: 1203 VIWGGVL 1209
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 4 LVWGGA 9
+WGGA
Sbjct: 884 FMWGGA 889
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 4 LVWGGA 9
+WGGA
Sbjct: 893 FMWGGA 898
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 4 LVWGGA 9
+WGGA
Sbjct: 893 FMWGGA 898
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 4 LVWGGA 9
+WGGA
Sbjct: 902 FMWGGA 907
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 4 LVWGGA 9
+WGGA
Sbjct: 902 FMWGGA 907
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 4 LVWGGA 9
+WGGA
Sbjct: 903 FMWGGA 908
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 4 LVWGGA 9
+WGGA
Sbjct: 903 FMWGGA 908
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 4 LVWGGA 9
+WGGA
Sbjct: 895 FMWGGA 900
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 4 LVWGGA 9
+WGGA
Sbjct: 895 FMWGGA 900
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 4 LVWGGA 9
+WGGA
Sbjct: 895 FMWGGA 900
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 4 LVWGGA 9
+WGGA
Sbjct: 893 FMWGGA 898
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 4 LVWGGA 9
+WGGA
Sbjct: 902 FMWGGA 907
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 4 LVWGGA 9
+WGGA
Sbjct: 899 FMWGGA 904
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 4 LVWGGA 9
+WGGA
Sbjct: 900 FMWGGA 905
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 4 LVWGGA 9
+WGGA
Sbjct: 899 FMWGGA 904
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 4 LVWGGA 9
+WGGA
Sbjct: 899 FMWGGA 904
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 4 LVWGGA 9
+WGGA
Sbjct: 899 FMWGGA 904
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 4 LVWGGA 9
+WGGA
Sbjct: 900 FMWGGA 905
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 4 LVWGGA 9
+WGGA
Sbjct: 888 FMWGGA 893
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 4 LVWGGA 9
+WGGA
Sbjct: 888 FMWGGA 893
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 4 LVWGGA 9
+WGGA
Sbjct: 886 FMWGGA 891
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 4 LVWGGA 9
+WGGA
Sbjct: 888 FMWGGA 893
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 4 LVWGGA 9
+WGGA
Sbjct: 885 FMWGGA 890
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 4 LVWGGA 9
+WGGA
Sbjct: 896 FMWGGA 901
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 4 LVWGGA 9
+WGGA
Sbjct: 896 FMWGGA 901
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 4 LVWGGA 9
+WGGA
Sbjct: 896 FMWGGA 901
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 4 LVWGGA 9
+WGGA
Sbjct: 887 FMWGGA 892
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 6 WGGAL 10
WGG+L
Sbjct: 99 WGGSL 103
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 6 WGGAL 10
WGGA+
Sbjct: 482 WGGAV 486
>sp|TRX1_VZVD|TRIPLEX capsid protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 ALVWGG 8
+VWGG
Sbjct: 469 GVVWGG 474
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 2 LALVWGGAL 10
L +VWGG +
Sbjct: 1161 LTVVWGGVV 1169
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 LALVWGGAL 10
L L WGG L
Sbjct: 2718 LQLKWGGGL 2726
>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka
Query: 5 VWGG 8
VWGG
Sbjct: 1296 VWGG 1299
>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Dumas)
Query: 5 VWGG 8
VWGG
Sbjct: 1296 VWGG 1299
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 VWGG 8
VWGG
Sbjct: 1074 VWGG 1077
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 VWGG 8
VWGG
Sbjct: 1074 VWGG 1077
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 VWGG 8
VWGG
Sbjct: 1074 VWGG 1077
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 VWGG 8
VWGG
Sbjct: 467 VWGG 470
>sp|TAX_HTL1F|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 2 LALVWGGAL 10
L +WGG++
Sbjct: 143 LYTLWGGSV 151
>sp|TAX_HTL1C|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 2 LALVWGGAL 10
L +WGG++
Sbjct: 143 LYTLWGGSV 151
>sp|TAX_HTL1A|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 2 LALVWGGAL 10
L +WGG++
Sbjct: 143 LYTLWGGSV 151
>sp|TRX1_HHV11|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain 17)
Query: 5 VWGGA 9
VWGG+
Sbjct: 12 VWGGS 16
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 MLALVW 6
+LAL+W
Sbjct: 743 LLALIW 748
>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)
Query: 2 LALVWGGA 9
+ + WGG+
Sbjct: 191 MRMAWGGS 198
>sp|GLYC_LASSJ|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain Mouse/Sierra
Query: 2 LALVWGGA 9
+ + WGG+
Sbjct: 192 MRMAWGGS 199
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 MLALVW 6
+LAL+W
Sbjct: 757 LLALIW 762
33|Sequence|161|170|WGGALGLGLL
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 WGGALGLGLL 10
WGG L LGLL
Sbjct: 1165 WGGILMLGLL 1174
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WGGALGLGLL 10
WGG + LG+L
Sbjct: 16 WGGMMLLGIL 25
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 1 WGGALGLGL 9
WG +LGL +
Sbjct: 614 WGSSLGLAI 622
>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 1 WGGALGLGL 9
WG +LGL +
Sbjct: 613 WGSSLGLAI 621
>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great
Query: 1 WGGALGLGL 9
WG +LGL +
Sbjct: 614 WGSSLGLAI 622
>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)
Query: 1 WGGALGLGL 9
WG +LGL +
Sbjct: 613 WGSSLGLAI 621
>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)
Query: 1 WGGALGLGL 9
WG +LGL +
Sbjct: 613 WGSSLGLAI 621
>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)
Query: 1 WGGALGLGL 9
WG +LGL +
Sbjct: 613 WGSSLGLAI 621
>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 1 WGGALGLGL 9
WG +LGL +
Sbjct: 614 WGSSLGLAI 622
>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 1 WGGALGLGL 9
WG +LGL +
Sbjct: 614 WGSSLGLAI 622
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 1 WGGALGLGL 9
WG +LGL +
Sbjct: 614 WGSSLGLAI 622
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 1 WGGALGLGL 9
WG +LGL +
Sbjct: 614 WGSSLGLAI 622
>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)
Query: 1 WGGALGLGL 9
WG +LGL +
Sbjct: 614 WGSSLGLAI 622
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 1 WGGALGLGL 9
WG +LGL +
Sbjct: 620 WGSSLGLAI 628
>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 WGGALGLGL 9
WG +LGL +
Sbjct: 627 WGSSLGLAI 635
>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann
Query: 1 WGGALGLGL 9
WG +LGL +
Sbjct: 627 WGSSLGLAI 635
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 1 WGGALGLGL 9
WG +LGL +
Sbjct: 620 WGSSLGLAI 628
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 1 WGGALGLGL 9
WG +LGL +
Sbjct: 626 WGSSLGLAI 634
>sp|GAG_SFV3L|GAG polyprotein|Simian foamy virus type 3
Query: 2 GGALGLGL 9
GG+LGL L
Sbjct: 338 GGSLGLSL 345
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 3 GALGLGLL 10
GAL +GLL
Sbjct: 788 GALAVGLL 795
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 GALGLGLL 10
GAL +GLL
Sbjct: 788 GALAVGLL 795
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 3 GALGLGLL 10
GAL +GLL
Sbjct: 773 GALAVGLL 780
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 3 GALGLGLL 10
GAL +GLL
Sbjct: 773 GALAVGLL 780
>sp|US22_HCMVM|TEGUMENT protein US22|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 WGGALG 6
W GALG
Sbjct: 362 WHGALG 367
>sp|US22_HCMVA|EARLY nuclear protein HWLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 WGGALG 6
W GALG
Sbjct: 362 WHGALG 367
>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65
Query: 2 GGALGLG 8
GG LG+G
Sbjct: 112 GGPLGIG 118
>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60
Query: 2 GGALGLG 8
GG LG+G
Sbjct: 111 GGPLGIG 117
>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4
Query: 2 GGALGLG 8
GG LG+G
Sbjct: 112 GGPLGIG 118
>sp|VL1_HPV50|MAJOR capsid protein L1|Human papillomavirus type 50
Query: 2 GGALGLG 8
GG LG+G
Sbjct: 109 GGPLGVG 115
>sp|VL1_HPV48|MAJOR capsid protein L1|Human papillomavirus type 48
Query: 2 GGALGLG 8
GG LG+G
Sbjct: 109 GGPLGVG 115
>sp|GG_HHV2H|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain HG52)
Query: 2 GGALGLGLL 10
GG L +GLL
Sbjct: 185 GGELHVGLL 193
>sp|GG_HHV2B|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain B4327UR)
Query: 2 GGALGLGLL 10
GG L +GLL
Sbjct: 185 GGELHVGLL 193
>sp|CEP1_HCMVM|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GGALGLGLL 10
G +GLGLL
Sbjct: 215 GWPVGLGLL 223
>sp|CEP1_HCMVA|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GGALGLGLL 10
G +GLGLL
Sbjct: 215 GWPVGLGLL 223
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GGALGLGLL 10
GG L LG+L
Sbjct: 16 GGTLLLGML 24
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 WGGALGLGL 9
W +G+G+
Sbjct: 240 WNAGMGVGV 248
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 WGGALGLGL 9
W +G+G+
Sbjct: 242 WNAGMGVGV 250
>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5
Query: 1 WGGALGL 7
W G LG+
Sbjct: 225 WPGVLGM 231
>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2
Query: 1 WGGALGL 7
W G LG+
Sbjct: 224 WPGVLGM 230
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 1 WGGALGL 7
WG A+G+
Sbjct: 705 WGLAIGI 711
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 GGALGLGLL 10
GG L LG+L
Sbjct: 16 GGTLLLGML 24
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 ALGLGLL 10
A+GLG+L
Sbjct: 524 AVGLGML 530
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 GGALGLGLL 10
G LGLG+L
Sbjct: 1336 GMLLGLGVL 1344
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 GGALGLGLL 10
G LGLG+L
Sbjct: 1336 GMLLGLGVL 1344
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 GGALGLGLL 10
G LGLG+L
Sbjct: 1336 GMLLGLGVL 1344
>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)
Query: 3 GALGLGL 9
GA+G GL
Sbjct: 657 GAIGTGL 663
>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 GALGLGL 9
GA+G GL
Sbjct: 657 GAIGTGL 663
>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)
Query: 3 GALGLGL 9
GA+G GL
Sbjct: 657 GAIGTGL 663
34|Sequence|166|175|GLGLLPVLAW
>sp|VP6_ROTYO|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 GLGLLPVLAW 10
G+G LPV W
Sbjct: 50 GIGNLPVRNW 59
>sp|VP6_ROTHW|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 GLGLLPVLAW 10
G+G LPV W
Sbjct: 50 GIGNLPVRNW 59
>sp|VP6_ROTH3|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 GLGLLPVLAW 10
G+G LPV W
Sbjct: 50 GIGNLPVRNW 59
>sp|VP6_ROTAD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 GLGLLPVLAW 10
G+G LPV W
Sbjct: 50 GIGNLPVRNW 59
>sp|VP6_ROT41|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 1 GLGLLPVLAW 10
G+G LPV W
Sbjct: 50 GIGNLPVRNW 59
>sp|VP6_ROTWI|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United
Query: 1 GLGLLPVLAW 10
G+G LP+ W
Sbjct: 50 GIGNLPIRNW 59
>sp|VP6_ROTHU|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 1 GLGLLPVLAW 10
G+G LP+ W
Sbjct: 50 GIGNLPIRNW 59
>sp|VP6_ROTHT|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 GLGLLPVLAW 10
G+G LP+ W
Sbjct: 50 GIGNLPIRNW 59
>sp|VP6_ROTHP|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 GLGLLPVLAW 10
G+G LP+ W
Sbjct: 50 GIGNLPIRNW 59
>sp|VP6_ROTHK|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 GLGLLPVLAW 10
G+G LP+ W
Sbjct: 50 GIGNLPIRNW 59
>sp|VP6_ROTH7|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United
Query: 1 GLGLLPVLAW 10
G+G LP+ W
Sbjct: 50 GIGNLPIRNW 59
>sp|VP6_ROTH6|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 GLGLLPVLAW 10
G+G LP+ W
Sbjct: 50 GIGNLPIRNW 59
>sp|VP6_ROTH1|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 1 GLGLLPVLAW 10
G+G LP+ W
Sbjct: 50 GIGNLPIRNW 59
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 LGLLPVLAW 10
LG+LP AW
Sbjct: 2919 LGVLPSRAW 2927
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 2 LGLLPVL 8
LGL+P+L
Sbjct: 167 LGLVPIL 173
>sp|VP6_ROTHS|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 GLGLLPVLAW 10
G+G LP W
Sbjct: 50 GIGNLPTRNW 59
>sp|VP6_ROTHL|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 1 GLGLLPVLAW 10
G+G LP W
Sbjct: 50 GIGNLPTRNW 59
>sp|VP6_ROTHD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 1 GLGLLPVLAW 10
G+G LP W
Sbjct: 50 GIGNLPTRNW 59
>sp|GH_HHV7J|ENVELOPE glycoprotein H|Human herpesvirus 7 (strain JI)
Query: 1 GLGLLPVL 8
G GLLP+L
Sbjct: 308 GDGLLPLL 315
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 LPVLAW 10
LPV AW
Sbjct: 434 LPVEAW 439
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 LPVLAW 10
LPV AW
Sbjct: 434 LPVEAW 439
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 LPVLAW 10
LPV AW
Sbjct: 434 LPVEAW 439
>sp|PG172_VACCC|PROTEIN A43|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 LGLLPVLAW 10
+ ++PVLA+
Sbjct: 13 MSIMPVLAY 21
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 4 LLPVLAW 10
LLPV AW
Sbjct: 660 LLPVPAW 666
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 GLGLLPVL 8
G GL+P L
Sbjct: 605 GTGLVPAL 612
>sp|CVC2_EBVG|CAPSID vertex component 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 GLGLLPVLA 9
G GLLP A
Sbjct: 324 GAGLLPTTA 332
>sp|CVC2_EBVB9|CAPSID vertex component 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 GLGLLPVLA 9
G GLLP A
Sbjct: 324 GAGLLPTTA 332
>sp|CVC2_EBVA8|CAPSID vertex component 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 GLGLLPVLA 9
G GLLP A
Sbjct: 324 GAGLLPTTA 332
35|Sequence|171|180|PVLAWNCLDG
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 5 WNCLD 9
WNC+D
Sbjct: 2438 WNCID 2442
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 5 WNCLD 9
WNC+D
Sbjct: 2438 WNCID 2442
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 5 WNCLD 9
WNC+D
Sbjct: 2419 WNCVD 2423
Query: 3 LAWNC 7
L WNC
Sbjct: 6287 LFWNC 6291
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 5 WNCLD 9
WNC+D
Sbjct: 2419 WNCVD 2423
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 5 WNCLD 9
WNCL+
Sbjct: 2427 WNCLN 2431
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 WNCLD 9
WNCL+
Sbjct: 2427 WNCLN 2431
Query: 3 LAWNC 7
L WNC
Sbjct: 6285 LFWNC 6289
>sp|CAPSD_HASVA|CAPSID polyprotein VP86|Human astrovirus VA1 (HAstV-VA1) (Mamastrovirus
Query: 4 AWNCLDG 10
WN LDG
Sbjct: 499 GWNTLDG 505
>sp|VE2_HPV31|REGULATORY protein E2|Human papillomavirus 31
Query: 5 WNCLDG 10
W C DG
Sbjct: 328 WTCTDG 333
>sp|VE8E2_HPV31|PROTEIN E8^E2C|Human papillomavirus 31
Query: 5 WNCLDG 10
W C DG
Sbjct: 140 WTCTDG 145
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 VLAWN 6
VLAWN
Sbjct: 420 VLAWN 424
>sp|UL09_HCMVM|MEMBRANE glycoprotein UL9|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PVLAWNCLD 9
P + W C D
Sbjct: 85 PNIMWQCTD 93
>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)
Query: 1 PVLAWNCLD 9
P++A +C+D
Sbjct: 419 PIIATSCVD 427
>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant
Query: 1 PVLAWNCLD 9
P++A +C+D
Sbjct: 419 PIIATSCVD 427
>sp|VE2_HPV6B|REGULATORY protein E2|Human papillomavirus type 6b
Query: 2 VLAWNCL 8
VL W C+
Sbjct: 30 VLHWKCM 36
>sp|VE2_HPV6A|REGULATORY protein E2|Human papillomavirus type 6a
Query: 2 VLAWNCL 8
VL W C+
Sbjct: 30 VLHWKCM 36
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 1 PVLAWN 6
PV+ WN
Sbjct: 104 PVIDWN 109
>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PVLAWNCLD 9
P++A +C+D
Sbjct: 419 PIIATSCVD 427
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 5 WNCLD 9
WNC++
Sbjct: 2450 WNCVN 2454
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 WNCLD 9
WNC++
Sbjct: 2450 WNCVN 2454
Query: 3 LAWNC 7
L WNC
Sbjct: 6308 LFWNC 6312
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 1 PVLAWN 6
PV+ WN
Sbjct: 104 PVIDWN 109
>sp|EP84_HCMVM|EARLY phosphoprotein p84|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 6 NCLDG 10
NC+DG
Sbjct: 43 NCVDG 47
>sp|EP84_HCMVA|EARLY phosphoprotein p84|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 NCLDG 10
NC+DG
Sbjct: 43 NCVDG 47
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 1 PVLAWNCL 8
P +W CL
Sbjct: 1879 PSCSWMCL 1886
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 PVLAWN 6
PV+ WN
Sbjct: 104 PVIDWN 109
>sp|VP6_ROTGI|INTERMEDIATE capsid protein VP6|Rotavirus B (isolate RVB/Rat/United
Query: 1 PVLAWN 6
PV+ WN
Sbjct: 358 PVVDWN 363
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 4 AWNCLDG 10
W C DG
Sbjct: 142 GWGCADG 148
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 LAWNC 7
L WNC
Sbjct: 5968 LFWNC 5972
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 LAWNC 7
L WNC
Sbjct: 5943 LFWNC 5947
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 5 WNCLDG 10
W CL G
Sbjct: 105 WRCLHG 110
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 5 WNCLDG 10
W CL G
Sbjct: 105 WRCLHG 110
>sp|E1BS_ADE05|E1B protein, small T-antigen|Human adenovirus C serotype 5
Query: 4 AWNCLD 9
AW CL+
Sbjct: 3 AWECLE 8
>sp|E1BS_ADE02|E1B protein, small T-antigen|Human adenovirus C serotype 2
Query: 4 AWNCLD 9
AW CL+
Sbjct: 3 AWECLE 8
36|Sequence|176|185|NCLDGLTTCG
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 CLDGLTTC 9
CLDG + C
Sbjct: 146 CLDGFSGC 153
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 CLDGLTTC 9
CLDG + C
Sbjct: 146 CLDGFSGC 153
>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human
Query: 1 NCLDGLTTC 9
N LDG T C
Sbjct: 501 NALDGNTIC 509
>sp|FUS_PI1HC|FUSION glycoprotein F0|Human parainfluenza 1 virus (strain
Query: 1 NCLDGLTTCG 10
NC+ TCG
Sbjct: 389 NCIASTCTCG 398
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 3 LDGLTTCG 10
LDG + CG
Sbjct: 704 LDGASVCG 711
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 1 NCLDGLTTCG 10
+CL G +CG
Sbjct: 1224 SCLKGACSCG 1233
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 NCLDGLTT 8
+CLD LTT
Sbjct: 1958 DCLDLLTT 1965
>sp|KR2_EBVG|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 GLTTCG 10
GLT+CG
Sbjct: 361 GLTSCG 366
>sp|KR2_EBVB9|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 GLTTCG 10
GLT+CG
Sbjct: 361 GLTSCG 366
>sp|KR2_EBVA8|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 GLTTCG 10
GLT+CG
Sbjct: 361 GLTSCG 366
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 CLDGLTTC 9
CL G TC
Sbjct: 392 CLAGQATC 399
>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 NCLDGLTTCG 10
NC TTCG
Sbjct: 124 NCCAEETTCG 133
>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 NCLDGLTTCG 10
NC TTCG
Sbjct: 124 NCCAEETTCG 133
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 2 CLDGLTTC 9
CLD T C
Sbjct: 2017 CLDTATFC 2024
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 2 CLDGLTTC 9
CLD T C
Sbjct: 2060 CLDTATFC 2067
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 2 CLDGLTTC 9
CLD T C
Sbjct: 2062 CLDTATFC 2069
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 CLDGLTTC 9
CLD T C
Sbjct: 2044 CLDTATFC 2051
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 CLDGLTTC 9
CLD T C
Sbjct: 2024 CLDTATFC 2031
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 CLDGLTTC 9
CLD T C
Sbjct: 2021 CLDTATFC 2028
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 NCLDGLTTC 9
+CLD T C
Sbjct: 1975 SCLDRATFC 1983
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 NCLDGLTTC 9
+CLD T C
Sbjct: 2013 SCLDRATFC 2021
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 1 NCLDGLTTC 9
+CLD T C
Sbjct: 695 SCLDRATFC 703
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 NCLDGLTTC 9
+CLD T C
Sbjct: 2026 SCLDRATFC 2034
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 NCLDGLTTC 9
+CLD T C
Sbjct: 2013 SCLDRATFC 2021
>sp|PG128_VAR67|PROTEIN OPG128|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 NCLDGLTT 8
+C D LTT
Sbjct: 20 SCADNLTT 27
>sp|PG128_VACCC|PROTEIN OPG128|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CLDGLTT 8
C D LTT
Sbjct: 21 CADNLTT 27
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 2 CLDGLTT 8
CL LTT
Sbjct: 1502 CLQALTT 1508
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 2 CLDGLTT 8
CL LTT
Sbjct: 1501 CLQALTT 1507
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 2 CLDGLTT 8
CL LTT
Sbjct: 1503 CLQALTT 1509
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 CLDGLTT 8
CL LTT
Sbjct: 1501 CLQALTT 1507
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 CLDGLTT 8
CL LTT
Sbjct: 1511 CLQALTT 1517
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 2 CLDGLTT 8
CL LTT
Sbjct: 1499 CLQALTT 1505
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 2 CLDGLTT 8
CL LTT
Sbjct: 1504 CLQALTT 1510
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 CLDGLTT 8
CL LTT
Sbjct: 1492 CLQALTT 1498
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 2 CLDGLTT 8
CL LTT
Sbjct: 1492 CLQALTT 1498
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 2 CLDGLTT 8
CL LTT
Sbjct: 1493 CLQALTT 1499
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 2 CLDGLTT 8
CL LTT
Sbjct: 1491 CLQALTT 1497
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 CLDGLTT 8
CL LTT
Sbjct: 1491 CLQALTT 1497
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 2 CLDGLTT 8
CL LTT
Sbjct: 1493 CLQALTT 1499
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 CLDGLTT 8
CL LTT
Sbjct: 1495 CLQALTT 1501
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 2 CLDGLTT 8
CL LTT
Sbjct: 1490 CLQALTT 1496
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 4 DGLTTC 9
DG+ TC
Sbjct: 433 DGINTC 438
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 4 DGLTTC 9
DG+ TC
Sbjct: 433 DGINTC 438
>sp|EV45_HHV2H|ENVELOPE protein UL45|Human herpesvirus 2 (strain HG52)
Query: 4 DGLTTC 9
DG+ TC
Sbjct: 122 DGIRTC 127
37|Sequence|181|190|LTTCGVVYPL
>sp|CEP1_HHV7J|CYTOPLASMIC envelopment protein 1|Human herpesvirus 7 (strain JI)
Query: 4 CGVVYPL 10
CG+VY L
Sbjct: 119 CGIVYAL 125
>sp|GM_HCMVM|ENVELOPE glycoprotein M|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 CGVVYPL 10
CG++YP+
Sbjct: 278 CGLIYPI 284
>sp|GM_HCMVA|ENVELOPE glycoprotein M|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 CGVVYPL 10
CG++YP+
Sbjct: 278 CGLIYPI 284
>sp|GD_HHV1H|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain HZT)
Query: 1 LTTCGVVY 8
L CG+VY
Sbjct: 354 LVICGIVY 361
>sp|GD_HHV1K|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain KOS)
Query: 1 LTTCGVVY 8
L CG+VY
Sbjct: 355 LVICGIVY 362
>sp|GD_HHV1F|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain F)
Query: 1 LTTCGVVY 8
L CG+VY
Sbjct: 355 LVICGIVY 362
>sp|GD_HHV1A|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Angelotti)
Query: 1 LTTCGVVY 8
L CG+VY
Sbjct: 355 LVICGIVY 362
>sp|GD_HHV1P|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Patton)
Query: 1 LTTCGVVY 8
L CG+VY
Sbjct: 355 LVICGIVY 362
>sp|GD_HHV11|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain 17)
Query: 1 LTTCGVVY 8
L CG+VY
Sbjct: 355 LVICGIVY 362
>sp|MIR1_HHV8P|E3 ubiquitin-protein ligase MIR1|Human herpesvirus 8 type P
Query: 4 CGVVY 8
CGVVY
Sbjct: 53 CGVVY 57
>sp|NCAP_SFSV|NUCLEOPROTEIN fever sicilian virus (SFS)
Query: 4 CGVVYP 9
CG YP
Sbjct: 137 CGQTYP 142
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 CGVVYPL 10
CGV+Y L
Sbjct: 154 CGVLYYL 160
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 LTTCGVV 7
+ TCG+V
Sbjct: 1228 VATCGIV 1234
>sp|NSP1B_ROTGA|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate
Query: 4 CGVVYP 9
CG +YP
Sbjct: 123 CGNLYP 128
>sp|GK_HHV1K|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain KOS)
Query: 3 TCGVVYPL 10
C + YPL
Sbjct: 242 ACAITYPL 249
>sp|PG204_VARV|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus
Query: 4 CGVVY 8
CG++Y
Sbjct: 175 CGIIY 179
>sp|PG204_VAR67|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus (isolate
Query: 4 CGVVY 8
CG++Y
Sbjct: 175 CGIIY 179
>sp|GK_HHV19|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R19)
Query: 3 TCGVVYPL 10
C + YPL
Sbjct: 242 ACAITYPL 249
>sp|GK_HHV1R|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R15)
Query: 3 TCGVVYPL 10
C + YPL
Sbjct: 242 ACAITYPL 249
>sp|GK_HHV1M|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain MP)
Query: 3 TCGVVYPL 10
C + YPL
Sbjct: 242 ACAITYPL 249
>sp|GK_HHV11|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain 17)
Query: 3 TCGVVYPL 10
C + YPL
Sbjct: 242 ACAITYPL 249
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 CGVVYPL 10
C V YP
Sbjct: 637 CSVAYPF 643
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 3 TCGVV 7
TCG+V
Sbjct: 830 TCGIV 834
38|Sequence|186|195|VVYPLSKNHL
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 3 YPLSKNHL 10
YP+S++HL
Sbjct: 1033 YPISQSHL 1040
>sp|UL92_HCMVM|UNCHARACTERIZED protein UL92|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 VYPLSKNHL 10
+YP++++HL
Sbjct: 65 LYPVARSHL 73
>sp|UL92_HCMVA|PROTEIN UL92|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 VYPLSKNHL 10
+YP++++HL
Sbjct: 65 LYPVARSHL 73
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 YPLSKN 8
YPLSK+
Sbjct: 4930 YPLSKH 4935
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 3 YPLSKNH 9
+PL NH
Sbjct: 548 FPLDANH 554
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 4 PLSKNH 9
PLSK H
Sbjct: 538 PLSKRH 543
>sp|VL2_HPV36|MINOR capsid protein L2|Human papillomavirus 36
Query: 1 VVYPLSKNH 9
V YP S+N+
Sbjct: 470 VAYPESRNN 478
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 2 VYPLSKNHL 10
V PL+KN L
Sbjct: 96 VGPLTKNEL 104
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 2 VYPLSKNHL 10
V PL+KN L
Sbjct: 96 VGPLTKNEL 104
>sp|VL2_HPV08|MINOR capsid protein L2|Human papillomavirus type 8
Query: 1 VVYPLSKNH 9
V YP S+N+
Sbjct: 470 VAYPESRNN 478
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 VYPLSKNHL 10
V PL+KN L
Sbjct: 96 VGPLTKNEL 104
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 VYPLSKNHL 10
V PL+KN L
Sbjct: 96 VGPLTKNEL 104
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 VYPLSKNHL 10
V PL+KN L
Sbjct: 96 VGPLTKNEL 104
>sp|VL2_HPV05|MINOR capsid protein L2|Human papillomavirus 5
Query: 1 VVYPLSKNH 9
V YP S+N+
Sbjct: 470 VAYPESRNN 478
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 VVYPLSKNHL 10
++Y K+HL
Sbjct: 1988 LIYSFEKHHL 1997
>sp|Y172_ADE02|UNCHARACTERIZED protein D-172|Human adenovirus C serotype 2
Query: 1 VVYPLS 6
++YPLS
Sbjct: 13 IIYPLS 18
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 VVYPLSKNHL 10
++Y K+HL
Sbjct: 1988 LIYSFEKHHL 1997
>sp|VL2_HPV5B|MINOR capsid protein L2|Human papillomavirus type 5b
Query: 1 VVYPLSKNH 9
V YP S+N+
Sbjct: 470 VAYPESRNN 478
39|Sequence|191|200|SKNHLVVLAI
>sp|VPAP_HHV7J|DNA polymerase processivity factor|Human herpesvirus 7 (strain JI)
Query: 1 SKNHLVVLAI 10
+KNHLV+ I
Sbjct: 66 AKNHLVLKLI 75
>sp|VPAP_HHV6G|DNA polymerase processivity factor|Human herpesvirus 6A (strain GS)
Query: 1 SKNHLV 6
+KNHLV
Sbjct: 87 AKNHLV 92
>sp|VPAP_HHV6U|DNA polymerase processivity factor|Human herpesvirus 6A (strain
Query: 1 SKNHLV 6
+KNHLV
Sbjct: 92 AKNHLV 97
>sp|VPAP_HHV6Z|DNA polymerase processivity factor|Human herpesvirus 6B (strain Z29)
Query: 1 SKNHLV 6
+KNHLV
Sbjct: 67 AKNHLV 72
>sp|GLYC_HRSV8|MAJOR surface glycoprotein G|Human respiratory syncytial virus B
Query: 3 NHLVVLA 9
NHL+V++
Sbjct: 21 NHLIVIS 27
40|Sequence|196|205|VVLAIAFFMV
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 VVLAIAFF 8
++LA+A+F
Sbjct: 355 ILLAVAYF 362
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 VVLAIAFF 8
++LA+A+F
Sbjct: 355 ILLAVAYF 362
>sp|IR10_HCMVM|PROTEIN IRL10|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VVLAIAFFMV 10
+VL + FF++
Sbjct: 90 IVLLVVFFVI 99
>sp|IR10_HCMVA|PROTEIN IRL10|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VVLAIAFFMV 10
+VL + FF++
Sbjct: 91 IVLLVVFFVI 100
>sp|GP42_EBVG|GLYCOPROTEIN 42|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 VVLAIAFFM 9
+VL +A+F+
Sbjct: 19 IVLLLAYFL 27
>sp|GP42_EBVB9|GLYCOPROTEIN 42|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VVLAIAFFM 9
+VL +A+F+
Sbjct: 19 IVLLLAYFL 27
>sp|GP42_EBVA8|GLYCOPROTEIN 42|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 VVLAIAFFM 9
+VL +A+F+
Sbjct: 19 IVLLLAYFL 27
41|Sequence|201|210|AFFMVFGIML
***** No hits found ******
42|Sequence|206|215|FGIMLQLYAQ
>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a
Query: 3 IMLQLYAQ 10
I LQLYAQ
Sbjct: 63 IPLQLYAQ 70
>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57
Query: 3 IMLQLYAQ 10
+ LQLYAQ
Sbjct: 63 VPLQLYAQ 70
>sp|VE2_HPV12|REGULATORY protein E2|Human papillomavirus 12
Query: 2 GIMLQL 7
GIMLQL
Sbjct: 74 GIMLQL 79
>sp|VE2_HPV08|REGULATORY protein E2|Human papillomavirus type 8
Query: 2 GIMLQL 7
GIMLQL
Sbjct: 74 GIMLQL 79
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 3 IMLQLYAQ 10
I LQLY Q
Sbjct: 63 IPLQLYTQ 70
>sp|UL132_HCMVM|ENVELOPE glycoprotein UL132|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FGIMLQL 7
FG++LQ+
Sbjct: 18 FGLLLQI 24
>sp|E3B14_ADE12|EARLY E3B 12.7 kDa protein|Human adenovirus A serotype 12
Query: 3 IMLQLYAQ 10
+ LQLYA+
Sbjct: 55 VSLQLYAR 62
43|Sequence|211|220|QLYAQICRIV
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 QLYAQICR 8
Q Y QIC+
Sbjct: 932 QHYGQICK 939
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 QLYAQICR 8
Q Y Q+C+
Sbjct: 932 QHYGQVCK 939
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 2 LYAQICR 8
LY+++CR
Sbjct: 241 LYSRMCR 247
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 2 LYAQICR 8
LY+++CR
Sbjct: 241 LYSRMCR 247
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 2 LYAQICR 8
LY+++CR
Sbjct: 241 LYSRMCR 247
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 QLYAQIC 7
Q YA IC
Sbjct: 618 QCYAYIC 624
44|Sequence|216|225|ICRIVCRHAQ
>sp|VE1_HPV11|REPLICATION protein E1|Human papillomavirus 11
Query: 2 CRIVCRH 8
C I+CRH
Sbjct: 406 CAIMCRH 412
>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka
Query: 3 RIVCRHA 9
R+ CRHA
Sbjct: 1129 RVFCRHA 1135
>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Dumas)
Query: 3 RIVCRHA 9
R+ CRHA
Sbjct: 1129 RVFCRHA 1135
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 2 CRIVCRH 8
C I+CRH
Sbjct: 398 CGIMCRH 404
>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33
Query: 2 CRIVCRH 8
C I+CRH
Sbjct: 398 CGIMCRH 404
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 2 CRIVCRH 8
C ++CRH
Sbjct: 398 CAVMCRH 404
>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59
Query: 2 CRIVCRH 8
C ++CRH
Sbjct: 399 CAVMCRH 405
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 2 CRIVCRH 8
C I+CRH
Sbjct: 386 CGIMCRH 392
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ICRIVCRHAQ 10
+C I C HA+
Sbjct: 82 VCVIFCLHAE 91
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ICRIVCRHAQ 10
+C I C HA+
Sbjct: 82 VCVIFCLHAE 91
>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 ICRIVCRHAQ 10
+C I C HA+
Sbjct: 82 VCVIFCLHAE 91
>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 ICRIVCRHAQ 10
+C I C HA+
Sbjct: 82 VCVIFCLHAE 91
>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30
Query: 2 CRIVCRH 8
C I+CRH
Sbjct: 387 CGIMCRH 393
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 ICRIVCRHAQ 10
+C I C HA+
Sbjct: 82 VCVIYCLHAE 91
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 2 CRIVCRH 8
C ++CRH
Sbjct: 399 CGVMCRH 405
>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 ICRIVCRHAQ 10
+C I C HA+
Sbjct: 82 VCVIYCLHAE 91
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 2 CRIVCRH 8
C ++CRH
Sbjct: 398 CGVMCRH 404
>sp|POLG_DEN23|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 3 RIVCRHA 9
R+VC+H+
Sbjct: 89 RLVCKHS 95
>sp|E1A_ADE41|EARLY E1A protein|Human adenovirus F serotype 41
Query: 2 CRIVCR 7
CR+ CR
Sbjct: 215 CRVSCR 220
>sp|E1A_ADE40|EARLY E1A protein|Human adenovirus F serotype 40
Query: 2 CRIVCR 7
CR+ CR
Sbjct: 213 CRVSCR 218
>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)
Query: 1 ICRIVCRH 8
+CR +CR+
Sbjct: 170 VCRHLCRY 177
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 RIVCRHA 9
R VC+H+
Sbjct: 269 RFVCKHS 275
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 RIVCRHA 9
R VC+H+
Sbjct: 89 RFVCKHS 95
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 RIVCRHA 9
R VC+H+
Sbjct: 369 RFVCKHS 375
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 RIVCRHA 9
R VC+H+
Sbjct: 369 RFVCKHS 375
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 RIVCRHA 9
R VC+H+
Sbjct: 369 RFVCKHS 375
>sp|POLG_DEN2H|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 RIVCRHA 9
R VC+H+
Sbjct: 138 RFVCKHS 144
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 RIVCRHA 9
R VC+H+
Sbjct: 369 RFVCKHS 375
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 3 RIVCRHA 9
R VC+H+
Sbjct: 369 RFVCKHS 375
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 RIVCRHA 9
R VC+H+
Sbjct: 369 RFVCKHS 375
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 RIVCRHA 9
R VC+H+
Sbjct: 369 RFVCKHS 375
>sp|POLG_DEN22|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 3 RIVCRHA 9
R VC+H+
Sbjct: 89 RFVCKHS 95
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 ICRIVCRHA 9
+C I+C +A
Sbjct: 4599 LCEILCEYA 4607
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 ICRIVCRHA 9
+C I+C +A
Sbjct: 4569 LCEILCEYA 4577
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 ICRIVCRHA 9
+C I+C +A
Sbjct: 4549 LCEILCEYA 4557
>sp|TAT_HV19N|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 CRIVCRHAQ 10
C++ C H Q
Sbjct: 27 CKVCCWHCQ 35
>sp|VE1_HPV53|REPLICATION protein E1|Human papillomavirus type 53
Query: 2 CRIVCRH 8
C I+CRH
Sbjct: 30 CGIMCRH 36
>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180
Query: 1 ICRIVCRH 8
IC+ VC++
Sbjct: 224 ICQSVCKY 231
>sp|VL1_HPV70|MAJOR capsid protein L1|Human papillomavirus type 70
Query: 1 ICRIVCRH 8
IC+ VC++
Sbjct: 222 ICQSVCKY 229
>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68
Query: 1 ICRIVCRH 8
IC+ VC++
Sbjct: 224 ICQSVCKY 231
>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)
Query: 1 ICRIVCRH 8
+CR CR+
Sbjct: 170 LCRHFCRY 177
>sp|TEG5_HHV2H|TEGUMENT protein UL47|Human herpesvirus 2 (strain HG52)
Query: 2 CRIVCRHA 9
CR+ R+A
Sbjct: 383 CRVAARYA 390
>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)
Query: 2 CRIVCRHA 9
CR+ R+A
Sbjct: 380 CRVAARYA 387
>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)
Query: 2 CRIVCRHA 9
CR+ R+A
Sbjct: 380 CRVAARYA 387
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 1 ICRIVCRH 8
+CR C H
Sbjct: 638 LCRSACVH 645
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 2 CRIVCRHA 9
CR +C +A
Sbjct: 505 CRYLCEYA 512
>sp|PB2_INCJJ|POLYMERASE basic protein 2|Influenza C virus (strain C/JJ/1950)
Query: 1 ICRIVCRHA 9
+CR VC A
Sbjct: 269 VCRKVCLAA 277
>sp|PB2_INCJH|POLYMERASE basic protein 2|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 ICRIVCRHA 9
+CR VC A
Sbjct: 269 VCRKVCLAA 277
>sp|PB2_INCBE|POLYMERASE basic protein 2|Influenza C virus (strain C/Berlin/1/1985)
Query: 1 ICRIVCRHA 9
+CR VC A
Sbjct: 269 VCRKVCLAA 277
>sp|PB2_INCAA|POLYMERASE basic protein 2|Influenza C virus (strain C/Ann
Query: 1 ICRIVCRHA 9
+CR VC A
Sbjct: 269 VCRKVCLAA 277
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 3 RIVCRHAQ 10
RIVCR+ +
Sbjct: 162 RIVCRYLE 169
>sp|NEC2_EBVB9|NUCLEAR egress protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 ICRIVCRHAQ 10
+C + RH Q
Sbjct: 45 LCTVKLRHGQ 54
>sp|AN_EBVG|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 ICRIVCRHA 9
+C+++C A
Sbjct: 173 VCKLICGDA 181
>sp|AN_EBVB9|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 ICRIVCRHA 9
+C+++C A
Sbjct: 173 VCKLICGDA 181
>sp|AN_EBVA8|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 ICRIVCRHA 9
+C+++C A
Sbjct: 173 VCKLICGDA 181
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 1 ICRIVCR 7
+CR CR
Sbjct: 554 VCRRTCR 560
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 1 ICRIVCRH 8
IC+ +C++
Sbjct: 251 ICQSICKY 258
>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39
Query: 1 ICRIVCRH 8
IC+ +C++
Sbjct: 223 ICQSICKY 230
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 1 ICRIVCRH 8
IC+ +C++
Sbjct: 285 ICQSICKY 292
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 3 RIVCRHA 9
+++CRH
Sbjct: 966 KLLCRHG 972
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 3 RIVCRHA 9
+++CRH
Sbjct: 966 KLLCRHG 972
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 RIVCRH 8
+ +CRH
Sbjct: 664 KFICRH 669
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 RIVCRH 8
+ +CRH
Sbjct: 664 KFICRH 669
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 RIVCRH 8
+ +CRH
Sbjct: 664 KFICRH 669
>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11
Query: 1 ICRIVCRH 8
IC VC++
Sbjct: 221 ICGTVCKY 228
>sp|VL1_HPV61|MAJOR capsid protein L1|Human papillomavirus type 61
Query: 1 ICRIVCRH 8
IC +C++
Sbjct: 225 ICTTICKY 232
>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52
Query: 1 ICRIVCRH 8
IC VC++
Sbjct: 253 ICSSVCKY 260
>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CRIVCRHA 9
CR + +HA
Sbjct: 250 CRNILKHA 257
>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)
Query: 2 CRIVCRHA 9
CR + +HA
Sbjct: 250 CRNILKHA 257
>sp|TAT_HV1U4|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 CRIVCRHAQ 10
C++ C H Q
Sbjct: 27 CKVCCWHCQ 35
>sp|TAT_HV1SE|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 CRIVCRHAQ 10
C++ C H Q
Sbjct: 27 CKVCCWHCQ 35
>sp|VIE1_HCMVM|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CRIVC 6
CR++C
Sbjct: 309 CRVLC 313
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 3 RIVCRHAQ 10
+++C HA+
Sbjct: 814 KLLCNHAK 821
>sp|VIE1_HCMVA|IMMEDIATE early protein IE1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CRIVC 6
CR++C
Sbjct: 309 CRVLC 313
>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31
Query: 1 ICRIVCRH 8
IC +C++
Sbjct: 225 ICNSICKY 232
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 2 CRIVCRHAQ 10
CRI H Q
Sbjct: 449 CRIAYHHEQ 457
45|Sequence|221|230|CRHAQQIALQ
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 CRHAQQIALQ 10
C H Q ALQ
Sbjct: 2019 CLHVVQCALQ 2028
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 CRHAQQIALQ 10
C H Q ALQ
Sbjct: 2019 CLHVVQCALQ 2028
>sp|NCAP_TULV|NUCLEOPROTEIN orthohantavirus (TULV) (Tula virus)
Query: 2 RHAQQIAL 9
RH QQI +
Sbjct: 13 RHEQQIVI 20
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 2 RHAQQIALQ 10
+HA Q+AL+
Sbjct: 178 KHALQLALE 186
>sp|VGP_MABVR|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 HAQQIALQ 10
HAQ IAL
Sbjct: 131 HAQGIALH 138
>sp|VGP_MABVP|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 HAQQIALQ 10
HAQ IAL
Sbjct: 131 HAQGIALH 138
>sp|VGP_MABVO|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 HAQQIALQ 10
HAQ IAL
Sbjct: 131 HAQGIALH 138
>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 HAQQIALQ 10
HAQ IAL
Sbjct: 131 HAQGIALH 138
>sp|VGP_MABVA|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 HAQQIALQ 10
HAQ IAL
Sbjct: 131 HAQGIALH 138
>sp|NS3B_SARS|ORF3B protein|Severe acute respiratory syndrome coronavirus
Query: 1 CRHAQQIALQ 10
C++ Q ALQ
Sbjct: 103 CKYTQSTALQ 112
46|Sequence|226|235|QIALQRHLLP
>sp|ORF1_HPBVH|UNCHARACTERIZED ORF1 protein|Human picobirnavirus (strain
Query: 1 QIALQRHL 8
QIA Q+HL
Sbjct: 5 QIAYQKHL 12
>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)
Query: 5 QRHLLP 10
++HLLP
Sbjct: 267 EKHLLP 272
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 2 IALQRHLL 9
+AL+RH L
Sbjct: 233 VALRRHYL 240
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 3 ALQRHL 8
ALQRH+
Sbjct: 951 ALQRHM 956
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 3 ALQRHL 8
ALQRH+
Sbjct: 951 ALQRHM 956
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 3 ALQRHL 8
ALQRH+
Sbjct: 951 ALQRHM 956
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 QIALQRHLLP 10
I+ RH+LP
Sbjct: 848 SISETRHILP 857
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 QIALQRHLLP 10
I+ RH+LP
Sbjct: 848 SISETRHILP 857
>sp|NEF_HV1MV|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 QIALQRH 7
IALQ+H
Sbjct: 199 HIALQKH 205
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 IALQRHLLP 10
I+ RH+LP
Sbjct: 848 ISETRHILP 856
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 IALQRHLLP 10
I+ RH+LP
Sbjct: 848 ISETRHILP 856
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 3 ALQRHLLP 10
ALQRH P
Sbjct: 855 ALQRHTDP 862
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 3 ALQRHLLP 10
ALQRH P
Sbjct: 855 ALQRHTDP 862
47|Sequence|231|240|RHLLPASHYV
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 LLPASHYV 10
L+P HYV
Sbjct: 5564 LVPQEHYV 5571
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 LLPASHYV 10
L+P HYV
Sbjct: 5541 LVPQEHYV 5548
>sp|DNB2_ADE07|DNA-BINDING protein|Human adenovirus B serotype 7
Query: 4 LPASHY 9
LPA HY
Sbjct: 503 LPAGHY 508
>sp|SCAF_HHV2H|CAPSID scaffolding protein|Human herpesvirus 2 (strain HG52)
Query: 4 LPASHY 9
+PASHY
Sbjct: 331 IPASHY 336
>sp|SCAF_HHV11|CAPSID scaffolding protein|Human herpesvirus 1 (strain 17)
Query: 4 LPASHY 9
+PASHY
Sbjct: 329 IPASHY 334
Query: 1 RHLLPAS 7
RHL PAS
Sbjct: 176 RHLSPAS 182
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 RHLLPAS 7
+H+LP+S
Sbjct: 98 KHVLPSS 104
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 1 RHLLPAS 7
+H+LP+S
Sbjct: 98 KHVLPSS 104
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 1 RHLLPA 6
RH+LP+
Sbjct: 467 RHILPS 472
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 1 RHLLPA 6
RH+LP+
Sbjct: 467 RHILPS 472
48|Sequence|236|245|ASHYVATRKG
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 ASHYVAT 7
ASHYV T
Sbjct: 2512 ASHYVVT 2518
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 ASHYVAT 7
ASHYV T
Sbjct: 2532 ASHYVVT 2538
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 ASHYVAT 7
ASHYV T
Sbjct: 2562 ASHYVVT 2568
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 ASHYVAT 7
ASHYV T
Sbjct: 2512 ASHYVVT 2518
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 ASHYVAT 7
ASHYV T
Sbjct: 2532 ASHYVVT 2538
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 ASHYVAT 7
ASHYV T
Sbjct: 2562 ASHYVVT 2568
>sp|CVC1_HHV7J|CAPSID vertex component 1|Human herpesvirus 7 (strain JI)
Query: 1 ASHYVATRKG 10
ASH++ +KG
Sbjct: 333 ASHFLHKKKG 342
>sp|PP85_HCMVM|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ASHYVATRKG 10
A H++ +RKG
Sbjct: 314 ALHFLTSRKG 323
>sp|PP85_HCMVA|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ASHYVATRKG 10
A H++ +RKG
Sbjct: 314 ALHFLTSRKG 323
>sp|VPAP_HCMVM|DNA polymerase processivity factor|Human cytomegalovirus (strain
Query: 4 YVATRKG 10
YVA+R G
Sbjct: 253 YVASRNG 259
>sp|VPAP_HCMVA|DNA polymerase processivity factor|Human cytomegalovirus (strain AD169)
Query: 4 YVATRKG 10
YVA+R G
Sbjct: 253 YVASRNG 259
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 4 YVATRKG 10
Y+ATR G
Sbjct: 930 YLATRSG 936
49|Sequence|241|250|ATRKGIATLA
***** No hits found ******
50|Sequence|246|255|IATLAVVLGA
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 IATLAVVLGA 10
+A LA+++GA
Sbjct: 1200 LAKLAILMGA 1209
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 IATLAVVLGA 10
+A LA+++GA
Sbjct: 1200 LAKLAILMGA 1209
51|Sequence|251|260|VVLGAFAACW
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 VVLGAFAACW 10
V+ G FAAC+
Sbjct: 636 VLPGGFAACF 645
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 4 GAFAACW 10
G F CW
Sbjct: 517 GGFITCW 523
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 4 GAFAACW 10
G F CW
Sbjct: 519 GGFITCW 525
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 4 GAFAACW 10
G F CW
Sbjct: 519 GGFITCW 525
>sp|GM_HHV6U|ENVELOPE glycoprotein M|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 VVLGAFAAC 9
V LGAFA C
Sbjct: 149 VALGAFAYC 157
>sp|NRAM_I000F|NEURAMINIDASE A virus (strain A/Chicken/Weybridge
Query: 4 GAFAACW 10
G+F CW
Sbjct: 407 GSFIDCW 413
>sp|MC160_MCV1|PROTEIN MC160|Molluscum contagiosum virus subtype 1
Query: 4 GAFAACW 10
GAFAAC
Sbjct: 226 GAFAACT 232
>sp|FUS_HMPVC|FUSION glycoprotein F0|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 3 LGAFAACW 10
LGA AC+
Sbjct: 378 LGALVACY 385
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 2 VLGAFAACW 10
VLG AC+
Sbjct: 1045 VLGGLGACF 1053
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 2 VLGAFAACW 10
VLG AC+
Sbjct: 1045 VLGGLGACF 1053
>sp|ICP22_HHV11|TRANSCRIPTIONAL regulator ICP22|Human herpesvirus 1 (strain 17)
Query: 4 GAFAAC 9
GAFA C
Sbjct: 7 GAFAPC 12
>sp|US36_HCMVA|UNCHARACTERIZED protein US36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 VLGAFAAC 9
+LGA +AC
Sbjct: 36 ILGADSAC 43
>sp|BEL1_SFV1|PROTEIN Bel-1|Simian foamy virus type 1
Query: 1 VVLGAFAAC 9
++LG + AC
Sbjct: 102 ILLGLYQAC 110
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 1 VVLGAFAACW 10
VVL A+C+
Sbjct: 709 VVLSLLASCY 718
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 1 VVLGAFAACW 10
VVL A+C+
Sbjct: 709 VVLSLLASCY 718
52|Sequence|256|265|FAACWLPFTV
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 5 WLPFT 9
WLPFT
Sbjct: 1950 WLPFT 1954
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 5 WLPFT 9
WLPFT
Sbjct: 1950 WLPFT 1954
>sp|VU8_HHV6Z|PROTEIN U8|Human herpesvirus 6B (strain Z29)
Query: 4 CWLPFTV 10
CWL FT+
Sbjct: 108 CWLRFTL 114
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 AACWLPFTV 10
++CWLP T+
Sbjct: 236 SSCWLPATL 244
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 FAACWLPFT 9
+ WLPF+
Sbjct: 1951 YKTSWLPFS 1959
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 1 FAACWLP 7
F+A W+P
Sbjct: 692 FSALWMP 698
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 1 FAACWLP 7
F+A W+P
Sbjct: 694 FSALWMP 700
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 WLPFTV 10
WLP TV
Sbjct: 1316 WLPMTV 1321
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 WLPFTV 10
WLP TV
Sbjct: 1316 WLPMTV 1321
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 WLPFTV 10
WLP TV
Sbjct: 1316 WLPMTV 1321
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 WLPFTV 10
WLP TV
Sbjct: 1316 WLPMTV 1321
>sp|US27_HCMVA|G-PROTEIN coupled receptor homolog US27|Human cytomegalovirus (strain AD169)
Query: 1 FAACWLPFTV 10
FA+ W PF +
Sbjct: 241 FASFWFPFNL 250
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 1 FAACWLP 7
F+A W+P
Sbjct: 687 FSALWMP 693
>sp|US27_HCMVM|ENVELOPE glycoprotein US27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FAACWLPFTV 10
FA+ W PF +
Sbjct: 243 FASFWFPFNL 252
>sp|TRX1_VZVD|TRIPLEX capsid protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 FAACWLPFTV 10
F AC P+TV
Sbjct: 176 FNACTAPWTV 185
>sp|E1B55_ADE07|E1B 55 kDa protein|Human adenovirus B serotype 7
Query: 1 FAACWL 6
F ACW+
Sbjct: 281 FYACWI 286
>sp|MATRX_PI4HA|MATRIX protein|Human parainfluenza 4a virus (strain
Query: 1 FAACWLPF 8
AC LPF
Sbjct: 88 LTACMLPF 95
>sp|MATRX_PI4HB|MATRIX protein|Human parainfluenza 4b virus (strain
Query: 1 FAACWLPF 8
AC LPF
Sbjct: 88 LTACMLPF 95
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 FAACWLPFT 9
+ CW+P T
Sbjct: 235 ISRCWIPVT 243
>sp|PG074_VAR67|PROTEIN OPG074|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 CWLPFT 9
CW P T
Sbjct: 508 CWGPLT 513
>sp|PG074_VACCC|PROTEIN OPG074|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 CWLPFT 9
CW P T
Sbjct: 508 CWGPLT 513
>sp|PG074_MONPV|PROTEIN OPG074|Monkeypox virus (MPXV)
Query: 4 CWLPFT 9
CW P T
Sbjct: 507 CWGPLT 512
>sp|VE6_HPV58|PROTEIN E6|Human papillomavirus 58
Query: 2 AACWLP 7
A CW P
Sbjct: 137 AVCWRP 142
>sp|VP3_ROTJ1|PROTEIN VP3|Rotavirus X (strain RVX/Human/China/NADRV-J19/1997/GXP[X]) (RV
Query: 5 WLPFTV 10
W+PF +
Sbjct: 318 WVPFNI 323
>sp|VP3_ROTB2|PROTEIN VP3|Rotavirus X (isolate
Query: 5 WLPFTV 10
W+PF +
Sbjct: 318 WVPFNI 323
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 AACWL 6
A+CWL
Sbjct: 1570 ASCWL 1574
>sp|TRX2_EBVB9|TRIPLEX capsid protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 AACWL 6
A CWL
Sbjct: 296 ATCWL 300
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 AACWLPFT 9
+ CW+P T
Sbjct: 236 SRCWVPVT 243
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 WLPFT 9
WLP T
Sbjct: 382 WLPLT 386
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 WLPFT 9
WLP T
Sbjct: 382 WLPLT 386
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 WLPFT 9
WLP T
Sbjct: 382 WLPLT 386
>sp|NSS_PTPV|NON-STRUCTURAL protein NS-S|Punta toro phlebovirus
Query: 5 WLPFTV 10
WLP T+
Sbjct: 240 WLPLTM 245
>sp|ORF58_HHV8P|PROTEIN ORF58|Human herpesvirus 8 type P
Query: 5 WLPFTV 10
WLPF V
Sbjct: 163 WLPFIV 168
>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 WLPF 8
WLPF
Sbjct: 219 WLPF 222
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 5 WLPF 8
WLPF
Sbjct: 350 WLPF 353
>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 WLPF 8
WLPF
Sbjct: 288 WLPF 291
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 AACWLPFT 9
+ CW P T
Sbjct: 236 STCWTPVT 243
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 AACWLPFT 9
+ CW P T
Sbjct: 236 STCWTPVT 243
>sp|GLYCO_ISFV|GLYCOPROTEIN virus (ISFV)
Query: 5 WLPF 8
WLPF
Sbjct: 384 WLPF 387
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 3 ACWLPFTV 10
+C LPF V
Sbjct: 788 SCCLPFLV 795
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 3 ACWLPFTV 10
+C LPF V
Sbjct: 788 SCCLPFLV 795
53|Sequence|261|270|LPFTVYCLLG
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 2 PFTVYCLL 9
PFTV+C+L
Sbjct: 375 PFTVFCVL 382
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 LPFTVYCLLG 10
+P T YCL G
Sbjct: 787 VPLTTYCLTG 796
>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 LPFTVYCLLG 10
LPF+VY + G
Sbjct: 81 LPFSVYLISG 90
>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas)
Query: 1 LPFTVYCLLG 10
LPF+VY + G
Sbjct: 81 LPFSVYLISG 90
>sp|ORF10_SARS2|PUTATIVE ORF10 protein|Severe acute respiratory syndrome coronavirus
Query: 1 LPFTVYCLL 9
PFT+Y LL
Sbjct: 9 FPFTIYSLL 17
>sp|VB18_VACCC|ANKYRIN repeat protein B18|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PFTVYCLL 9
P+T+ CLL
Sbjct: 376 PYTINCLL 383
>sp|VB18_VACCA|ANKYRIN repeat protein B18|Vaccinia virus (strain Ankara) (VACV)
Query: 2 PFTVYCLL 9
P+T+ CLL
Sbjct: 376 PYTINCLL 383
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 1 LPFTVYCLLG 10
PF VY + G
Sbjct: 88 FPFAVYLITG 97
>sp|NRAM_INBUS|NEURAMINIDASE B virus (strain B/USSR/100/1983)
Query: 5 VYCLLG 10
+YCL+G
Sbjct: 445 IYCLMG 450
>sp|NRAM_INBLE|NEURAMINIDASE B virus (strain B/Lee/1940)
Query: 5 VYCLLG 10
+YCL+G
Sbjct: 445 IYCLMG 450
>sp|NRAM_INBBE|NEURAMINIDASE B virus (strain B/Beijing/1/1987)
Query: 5 VYCLLG 10
+YCL+G
Sbjct: 444 IYCLMG 449
>sp|NRAM_INBMF|NEURAMINIDASE B virus (strain B/Memphis/3/1989)
Query: 5 VYCLLG 10
+YCL+G
Sbjct: 444 IYCLMG 449
>sp|NRAM_INBYB|NEURAMINIDASE B virus (strain B/Yamagata/16/1988)
Query: 5 VYCLLG 10
+YCL+G
Sbjct: 445 IYCLMG 450
>sp|NRAM_INBVI|NEURAMINIDASE B virus (strain B/Victoria/3/1985)
Query: 5 VYCLLG 10
+YCL+G
Sbjct: 444 IYCLMG 449
>sp|NRAM_INBME|NEURAMINIDASE B virus (strain B/Memphis/6/1986)
Query: 5 VYCLLG 10
+YCL+G
Sbjct: 444 IYCLMG 449
>sp|NRAM_INBLN|NEURAMINIDASE B virus (strain B/Leningrad/179/1986)
Query: 5 VYCLLG 10
+YCL+G
Sbjct: 444 IYCLMG 449
>sp|NRAM_INBHK|NEURAMINIDASE B virus (strain B/Hong
Query: 5 VYCLLG 10
+YCL+G
Sbjct: 445 IYCLMG 450
>sp|NRAM_INBSI|NEURAMINIDASE B virus (strain B/Singapore/222/1979)
Query: 5 VYCLLG 10
+YCL+G
Sbjct: 445 IYCLMG 450
>sp|NRAM_INBOR|NEURAMINIDASE B virus (strain B/Oregon/5/1980)
Query: 5 VYCLLG 10
+YCL+G
Sbjct: 445 IYCLMG 450
>sp|NRAM_INBMD|NEURAMINIDASE B virus (strain B/Maryland/1959)
Query: 5 VYCLLG 10
+YCL+G
Sbjct: 445 IYCLMG 450
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 LPFTVYCLL 9
+PF V C+L
Sbjct: 1288 VPFQVDCIL 1296
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 2 PFTVYCL 8
P T YC+
Sbjct: 332 PLTFYCI 338
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 2 PFTVYCL 8
P T YC+
Sbjct: 332 PLTFYCI 338
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 2 PFTVYCLL 9
P TV+C+L
Sbjct: 375 PCTVFCVL 382
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 2 PFTVYC 7
PF +YC
Sbjct: 68 PFVMYC 73
>sp|VIRF2_HHV8P|VIRAL IRF2-like protein|Human herpesvirus 8 type P
Query: 2 PFTVY 6
PFT+Y
Sbjct: 95 PFTIY 99
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 2 PFTVYCLL 9
P TV+C+L
Sbjct: 375 PCTVFCVL 382
>sp|VE7_HPV54|PROTEIN E7|Human papillomavirus type 54
Query: 2 PFTVYC 7
PF +YC
Sbjct: 19 PFDLYC 24
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 4 TVYCLL 9
++YCLL
Sbjct: 796 SIYCLL 801
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 4 TVYCLL 9
++YCLL
Sbjct: 796 SIYCLL 801
>sp|TEG6_HHV2H|TEGUMENT protein UL55|Human herpesvirus 2 (strain HG52)
Query: 2 PFTVYCLLG 10
PF+ C LG
Sbjct: 144 PFSKTCWLG 152
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 6 YCLLG 10
YC+LG
Sbjct: 2012 YCVLG 2016
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 6 YCLLG 10
YC+LG
Sbjct: 2012 YCVLG 2016
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 6 YCLLG 10
YC+LG
Sbjct: 2012 YCVLG 2016
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 6 YCLLG 10
YC+LG
Sbjct: 2012 YCVLG 2016
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 6 YCLLG 10
YC+LG
Sbjct: 2012 YCVLG 2016
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 LPFTVYCLLG 10
+P Y LLG
Sbjct: 787 VPMVTYTLLG 796
54|Sequence|266|275|YCLLGDAHSP
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 YCLLGDA 7
YCL GD+
Sbjct: 199 YCLAGDS 205
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 4 LGDAHSP 10
+G+AH+P
Sbjct: 364 MGEAHNP 370
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 4 LGDAHSP 10
+G+AH+P
Sbjct: 362 MGEAHNP 368
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 5 GDAHSP 10
GDAH P
Sbjct: 153 GDAHIP 158
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 CLLGDAHSP 10
CL+GD P
Sbjct: 684 CLVGDLVDP 692
>sp|VP16_HHV2H|TEGUMENT protein VP16|Human herpesvirus 2 (strain HG52)
Query: 3 LLGDAHSP 10
+LGD SP
Sbjct: 447 MLGDVESP 454
Query: 5 GDAHSP 10
GDAH P
Sbjct: 114 GDAHVP 119
>sp|VP16_HHV23|TEGUMENT protein VP16|Human herpesvirus 2 (strain 333)
Query: 3 LLGDAHSP 10
+LGD SP
Sbjct: 447 MLGDVESP 454
Query: 5 GDAHSP 10
GDAH P
Sbjct: 114 GDAHVP 119
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 5 GDAHSP 10
G+AH+P
Sbjct: 371 GEAHNP 376
>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P
Query: 5 GDAHSP 10
GDA SP
Sbjct: 765 GDAQSP 770
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 YCLLGDAHS 9
+CL GD+ +
Sbjct: 199 FCLAGDSDT 207
>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989
Query: 3 LLGDAH 8
LLGD H
Sbjct: 86 LLGDPH 91
>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986
Query: 3 LLGDAH 8
LLGD H
Sbjct: 70 LLGDPH 75
>sp|HEMA_I84A5|HEMAGGLUTININ A virus (strain A/Swine/Ukkel/1/1984
Query: 3 LLGDAH 8
LLGD H
Sbjct: 86 LLGDPH 91
>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong
Query: 3 LLGDAH 8
LLGD H
Sbjct: 86 LLGDPH 91
>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 3 LLGDAH 8
LLGD H
Sbjct: 70 LLGDPH 75
>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980
Query: 3 LLGDAH 8
LLGD H
Sbjct: 86 LLGDPH 91
>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979
Query: 3 LLGDAH 8
LLGD H
Sbjct: 70 LLGDPH 75
>sp|HEMA_I78A9|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 3 LLGDAH 8
LLGD H
Sbjct: 70 LLGDPH 75
>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978
Query: 3 LLGDAH 8
LLGD H
Sbjct: 86 LLGDPH 91
>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978
Query: 3 LLGDAH 8
LLGD H
Sbjct: 86 LLGDPH 91
>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 3 LLGDAH 8
LLGD H
Sbjct: 86 LLGDPH 91
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 3 LLGDAH 8
LLGD H
Sbjct: 86 LLGDPH 91
>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977
Query: 3 LLGDAH 8
LLGD H
Sbjct: 86 LLGDPH 91
>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976
Query: 3 LLGDAH 8
LLGD H
Sbjct: 86 LLGDPH 91
>sp|HEMA_I75A3|HEMAGGLUTININ A virus (strain A/Victoria/3/1975
Query: 3 LLGDAH 8
LLGD H
Sbjct: 87 LLGDPH 92
>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 3 LLGDAH 8
LLGD H
Sbjct: 70 LLGDPH 75
>sp|HEMA_I75A0|HEMAGGLUTININ A virus (strain A/Beijing/39/1975
Query: 3 LLGDAH 8
LLGD H
Sbjct: 86 LLGDPH 91
>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port
Query: 3 LLGDAH 8
LLGD H
Sbjct: 86 LLGDPH 91
>sp|HEMA_I72A4|HEMAGGLUTININ A virus (strain A/Memphis/101/1972
Query: 3 LLGDAH 8
LLGD H
Sbjct: 86 LLGDPH 91
>sp|HEMA_I72A3|HEMAGGLUTININ A virus (strain A/Memphis/102/1972
Query: 3 LLGDAH 8
LLGD H
Sbjct: 86 LLGDPH 91
>sp|HEMA_I72A2|HEMAGGLUTININ A virus (strain A/Udorn/307/1972
Query: 3 LLGDAH 8
LLGD H
Sbjct: 86 LLGDPH 91
>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971
Query: 3 LLGDAH 8
LLGD H
Sbjct: 86 LLGDPH 91
>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern
Query: 3 LLGDAH 8
LLGD H
Sbjct: 86 LLGDPH 91
>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong
Query: 3 LLGDAH 8
LLGD H
Sbjct: 86 LLGDPH 91
>sp|HEMA_I68A0|HEMAGGLUTININ A virus (strain A/Aichi/2/1968
Query: 3 LLGDAH 8
LLGD H
Sbjct: 86 LLGDPH 91
>sp|HEMA_I000X|HEMAGGLUTININ A virus (strain A/X-31
Query: 3 LLGDAH 8
LLGD H
Sbjct: 86 LLGDPH 91
>sp|HEMA_HUTV|HEMAGGLUTININ-ESTERASE torovirus (HuTV)
Query: 2 CLLGDAHS 9
CL GD+ S
Sbjct: 32 CLFGDSRS 39
>sp|HEMA_I70A0|HEMAGGLUTININ A virus (strain A/Qu/7/1970
Query: 3 LLGDAH 8
LLGD H
Sbjct: 70 LLGDPH 75
>sp|HEMA_I69A0|HEMAGGLUTININ A virus (strain A/England/878/1969
Query: 3 LLGDAH 8
LLGD H
Sbjct: 70 LLGDPH 75
>sp|FUS_PI1HC|FUSION glycoprotein F0|Human parainfluenza 1 virus (strain
Query: 2 CLLGD 6
C+LGD
Sbjct: 358 CILGD 362
>sp|VE7_HPV38|PROTEIN E7|Human papillomavirus 38
Query: 2 CLLGD 6
CLLGD
Sbjct: 79 CLLGD 83
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 2 CLLGDAHS 9
CL GD+++
Sbjct: 200 CLAGDSNT 207
>sp|NEP_I50A0|NUCLEAR export protein|Influenza A virus (strain A/Fort
Query: 4 LGDAHS 9
LGD HS
Sbjct: 52 LGDLHS 57
>sp|NEP_I07A0|NUCLEAR export protein|Influenza A virus (strain
Query: 4 LGDAHS 9
LGD HS
Sbjct: 52 LGDLHS 57
>sp|NEP_I00A1|NUCLEAR export protein|Influenza A virus (strain A/New
Query: 4 LGDAHS 9
LGD HS
Sbjct: 52 LGDLHS 57
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 2 CLLGDAHS 9
CL GD+++
Sbjct: 200 CLAGDSNT 207
>sp|VU51_HHV6Z|G-PROTEIN coupled receptor homolog U51|Human herpesvirus 6B (strain Z29)
Query: 1 YCLLGDAHS 9
YC+ D H+
Sbjct: 256 YCMACDDHT 264
>sp|VU51_HHV6U|G-PROTEIN coupled receptor homolog U51|Human herpesvirus 6A (strain
Query: 1 YCLLGDAHS 9
YC+ D H+
Sbjct: 256 YCMACDDHT 264
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 2 CLLGDAHSP 10
CLLG+ P
Sbjct: 274 CLLGNVSFP 282
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 2 CLLGDAHSP 10
CLLG+ P
Sbjct: 274 CLLGNVSFP 282
>sp|TRX1_HCMVM|TRIPLEX capsid protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 YCLLGDAHS 9
+CL D H+
Sbjct: 253 WCLADDIHT 261
>sp|TRX1_HCMVA|TRIPLEX capsid protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 YCLLGDAHS 9
+CL D H+
Sbjct: 253 WCLADDIHT 261
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 2 CLLGDAHSP 10
CLLG+ P
Sbjct: 274 CLLGNVSFP 282
55|Sequence|271|280|DAHSPPLYTY
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 1 DAHSPPLYTY 10
D +PP +TY
Sbjct: 515 DDATPPCWTY 524
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 1 DAHSPPLYTY 10
D +PP +TY
Sbjct: 516 DDATPPCWTY 525
>sp|FUS_HENDH|FUSION glycoprotein F0|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 AHSPPLYT 9
A PP+YT
Sbjct: 444 AVGPPVYT 451
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 SPPLYT 9
SPP YT
Sbjct: 711 SPPSYT 716
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 SPPLYT 9
SPP YT
Sbjct: 715 SPPSYT 720
>sp|NCAP_PI4HA|NUCLEOPROTEIN parainfluenza 4a virus (strain
Query: 1 DAHSPPLYT 9
DA PP YT
Sbjct: 105 DAIDPPDYT 113
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 SPPLYT 9
SPP YT
Sbjct: 716 SPPSYT 721
>sp|VE2_HPV07|REGULATORY protein E2|Human papillomavirus 7
Query: 1 DAHSPP 6
D+H+PP
Sbjct: 241 DSHAPP 246
>sp|NCAP_MABVO|NUCLEOPROTEIN Victoria marburgvirus (strain Ozolin-75)
Query: 5 PPLYT 9
PPLYT
Sbjct: 560 PPLYT 564
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 3 HSPPLYT 9
H+PP+++
Sbjct: 876 HAPPMFS 882
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 1 DAHSPPLY 8
D H P+Y
Sbjct: 448 DIHGAPVY 455
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate
Query: 1 DAHSPPLY 8
D H P+Y
Sbjct: 448 DIHGAPVY 455
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DAHSPPLY 8
D H P+Y
Sbjct: 448 DIHGAPVY 455
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 DAHSPPLY 8
D H P+Y
Sbjct: 448 DIHGAPVY 455
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 1 DAHSPPLY 8
D H P+Y
Sbjct: 448 DIHGAPVY 455
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 DAHSPPLY 8
D +SPP Y
Sbjct: 1634 DINSPPAY 1641
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 HSPPLY 8
H+PP++
Sbjct: 187 HAPPMF 192
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 HSPPLY 8
H+PP++
Sbjct: 187 HAPPMF 192
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 HSPPLY 8
H+PP++
Sbjct: 187 HAPPMF 192
56|Sequence|276|285|PLYTYLTLLP
>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)
Query: 1 PLYTYLTL 8
PLY+YL++
Sbjct: 18 PLYSYLSI 25
>sp|UL88_HHV7J|PROTEIN U59|Human herpesvirus 7 (strain JI)
Query: 2 LYTYLTLLP 10
+Y+Y TLLP
Sbjct: 263 IYSYKTLLP 271
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 4 TYLTLLP 10
TY TLLP
Sbjct: 516 TYTTLLP 522
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 1 PLYTYLTL 8
P+Y Y+T+
Sbjct: 960 PIYKYITM 967
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 1 PLYTYLTL 8
P+Y Y+T+
Sbjct: 960 PIYKYITI 967
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 1 PLYTYLTL 8
P+Y Y+T+
Sbjct: 960 PIYKYITI 967
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 4 TYLTLLP 10
TY TLLP
Sbjct: 513 TYTTLLP 519
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 1 PLYTYLT 7
P+Y Y+T
Sbjct: 952 PVYKYIT 958
>sp|US03_HHV2H|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 2 (strain HG52)
Query: 2 LYTYLTLLP 10
LYTYL+ P
Sbjct: 266 LYTYLSKRP 274
>sp|GG_HHV11|ENVELOPE glycoprotein G|Human herpesvirus 1 (strain 17)
Query: 1 PLYTYLTLLP 10
PL+++LT P
Sbjct: 177 PLFSFLTASP 186
>sp|PG003_MONPV|ANKYRIN repeat protein OPG003|Monkeypox virus (MPXV)
Query: 1 PLYTYL 6
PL+TYL
Sbjct: 231 PLHTYL 236
>sp|PG003_VAR67|ANKYRIN repeat protein OPG003|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 PLYTYL 6
PL+TYL
Sbjct: 228 PLHTYL 233
57|Sequence|281|290|LTLLPATYNS
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TLLPAT 7
TLLPAT
Sbjct: 711 TLLPAT 716
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 3 LLPATYNS 10
L+P YNS
Sbjct: 572 LIPGDYNS 579
>sp|VE2_HPV44|REGULATORY protein E2|Human papillomavirus 44
Query: 3 LLPATYNS 10
+LP +YNS
Sbjct: 276 ILPNSYNS 283
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 3 LLPATYNS 10
+LPA Y S
Sbjct: 153 ILPAMYES 160
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 LLPATYNS 10
++P YNS
Sbjct: 572 IIPGDYNS 579
58|Sequence|286|295|ATYNSMINPI
>sp|GAG_HTL32|GAG polyprotein|Human T-cell leukemia virus 3
Query: 2 TYNSMINPI 10
TY+S INPI
Sbjct: 4 TYSSPINPI 12
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 3 YNSMINPI 10
++SMINP+
Sbjct: 1830 FSSMINPL 1837
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 2 TYNSMINPI 10
TY+S INPI
Sbjct: 4 TYSSPINPI 12
>sp|GAG_HTL3P|GAG polyprotein|Human T-cell leukemia virus 3
Query: 2 TYNSMINPI 10
TY+S +NPI
Sbjct: 4 TYSSPVNPI 12
>sp|PRO_HTL32|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 2 TYNSMINPI 10
TY+S INPI
Sbjct: 4 TYSSPINPI 12
>sp|PRO_HTL3P|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 2 TYNSMINPI 10
TY+S +NPI
Sbjct: 4 TYSSPVNPI 12
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 2 TYNSMINPI 10
TY+S +NPI
Sbjct: 4 TYSSPVNPI 12
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 4 NSMINPI 10
N+MINPI
Sbjct: 121 NNMINPI 127
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 4 NSMINPI 10
+SMINP+
Sbjct: 1840 SSMINPL 1846
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 4 NSMINPI 10
+SMINP+
Sbjct: 1839 SSMINPL 1845
Query: 4 NSMINP 9
N MINP
Sbjct: 1760 NQMINP 1765
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 NSMINPI 10
N+MINPI
Sbjct: 121 NNMINPI 127
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 3 YNSMINP 9
+N M+NP
Sbjct: 1763 FNQMMNP 1769
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 3 YNSMINPI 10
YNSM+N I
Sbjct: 357 YNSMLNNI 364
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 3 YNSMINPI 10
YNSM+N I
Sbjct: 357 YNSMLNNI 364
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 3 YNSMINPI 10
YNSM+N I
Sbjct: 357 YNSMLNNI 364
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 4 NSMINPI 10
+SM+NP+
Sbjct: 1841 SSMVNPL 1847
>sp|DUT_VZVO|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain
Query: 2 TYNSMINP 9
TY +INP
Sbjct: 225 TYKHIINP 232
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 3 YNSMINPI 10
+NSMIN I
Sbjct: 2026 FNSMINNI 2033
>sp|DUT_VZVD|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain
Query: 2 TYNSMINP 9
TY +INP
Sbjct: 225 TYKHIINP 232
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 YNSMINPI 10
+NSMIN I
Sbjct: 2038 FNSMINNI 2045
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 YNSMINPI 10
+NSMIN I
Sbjct: 2028 FNSMINNI 2035
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 3 YNSMINPI 10
+NSMIN I
Sbjct: 2028 FNSMINNI 2035
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 3 YNSMINPI 10
+NSMIN I
Sbjct: 2018 FNSMINNI 2025
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 3 YNSMINPI 10
+NSMIN I
Sbjct: 2028 FNSMINNI 2035
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 3 YNSMINPI 10
+NSMIN I
Sbjct: 2030 FNSMINNI 2037
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 3 YNSMINPI 10
+NSMIN I
Sbjct: 2019 FNSMINNI 2026
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 YNSMINPI 10
+NSMIN I
Sbjct: 2022 FNSMINNI 2029
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 YNSMINPI 10
+NSMIN I
Sbjct: 2036 FNSMINNI 2043
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 3 YNSMINPI 10
+NSMIN I
Sbjct: 2028 FNSMINNI 2035
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 YNSMINPI 10
+NSMIN I
Sbjct: 2019 FNSMINNI 2026
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 YNSMINPI 10
+NSMIN I
Sbjct: 2017 FNSMINNI 2024
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 3 YNSMINPI 10
+NSMIN I
Sbjct: 2028 FNSMINNI 2035
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 YNSMINPI 10
+NSMIN I
Sbjct: 2020 FNSMINNI 2027
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 3 YNSMINPI 10
+NSMIN I
Sbjct: 2020 FNSMINNI 2027
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 3 YNSMINPI 10
+NSMIN I
Sbjct: 2029 FNSMINNI 2036
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 3 YNSMINPI 10
+NSMIN I
Sbjct: 2031 FNSMINNI 2038
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 3 YNSMINPI 10
+NSMIN I
Sbjct: 2018 FNSMINNI 2025
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 3 YNSMINPI 10
+NSMIN I
Sbjct: 2028 FNSMINNI 2035
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 3 YNSMINPI 10
+NSMIN I
Sbjct: 2020 FNSMINNI 2027
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 3 YNSMINPI 10
+NSMIN I
Sbjct: 2014 FNSMINNI 2021
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 3 YNSMINPI 10
+NSMIN I
Sbjct: 2013 FNSMINNI 2020
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 3 YNSMINPI 10
+NSMIN I
Sbjct: 1988 FNSMINNI 1995
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 4 NSMINPI 10
NS+I+P+
Sbjct: 554 NSLIDPV 560
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 NSMINPI 10
NS+I+P+
Sbjct: 554 NSLIDPV 560
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 YNSMINPI 10
YN MIN +
Sbjct: 1126 YNPMINVV 1133
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 2 TYNSMINPI 10
TY + +NPI
Sbjct: 1116 TYCTNLNPI 1124
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 3 YNSMIN 8
+NSMIN
Sbjct: 2041 FNSMIN 2046
>sp|VL2_HPV50|MINOR capsid protein L2|Human papillomavirus type 50
Query: 1 ATYNSMINP 9
AT+ + INP
Sbjct: 187 ATFETQINP 195
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 3 YNSMIN 8
+NSMIN
Sbjct: 2041 FNSMIN 2046
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 3 YNSMIN 8
+NSMIN
Sbjct: 2041 FNSMIN 2046
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 3 YNSMIN 8
+NSMIN
Sbjct: 2040 FNSMIN 2045
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 3 YNSMIN 8
+NSMIN
Sbjct: 2042 FNSMIN 2047
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 3 YNSMIN 8
+NSMIN
Sbjct: 2044 FNSMIN 2049
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 3 YNSMIN 8
+NSMIN
Sbjct: 2044 FNSMIN 2049
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 3 YNSMIN 8
+NSMIN
Sbjct: 2049 FNSMIN 2054
59|Sequence|291|300|MINPIIYAFR
>sp|UL33_HCMVM|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain Merlin)
Query: 1 MINPIIYAF 9
+INPI+YA
Sbjct: 300 LINPILYAL 308
>sp|UL33_HCMVA|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain AD169)
Query: 1 MINPIIYAF 9
+INPI+YA
Sbjct: 300 LINPILYAL 308
>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23
Query: 2 INPIIYAF 9
+NP +YAF
Sbjct: 283 MNPNVYAF 290
>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22
Query: 2 INPIIYAF 9
+NP +YAF
Sbjct: 284 MNPNVYAF 291
>sp|UL33_HHV6U|G-PROTEIN coupled receptor homolog U12|Human herpesvirus 6A (strain
Query: 3 NPIIYAF 9
NP++YAF
Sbjct: 290 NPLVYAF 296
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 1 MINPII 6
MINP+I
Sbjct: 1841 MINPLI 1846
>sp|UL33_HHV7J|G-PROTEIN coupled receptor homolog U12|Human herpesvirus 7 (strain JI)
Query: 3 NPIIYAF 9
NP++YAF
Sbjct: 307 NPLVYAF 313
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 MINPIIYAF 9
+IN +IYA+
Sbjct: 197 VINDLIYAY 205
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 MINPIIYAF 9
+IN +IYA+
Sbjct: 197 VINDLIYAY 205
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 MINPIIYAF 9
+IN +IYA+
Sbjct: 197 VINDLIYAY 205
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 MINPIIYAF 9
+IN +IYA+
Sbjct: 197 VINDLIYAY 205
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 MINPIIYAF 9
+IN +IYA+
Sbjct: 197 VINDLIYAY 205
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 MINPIIYAF 9
+IN +IYA+
Sbjct: 197 VINDLIYAY 205
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 MINPIIYAF 9
+IN +IYA+
Sbjct: 197 VINDLIYAY 205
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 MINPIIYA 8
MINP++ +
Sbjct: 1842 MINPLVMS 1849
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 MINPII 6
MINP++
Sbjct: 1833 MINPLV 1838
>sp|VP2_ROTH7|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 1 MINPIIYAF 9
+++PI YAF
Sbjct: 244 ILHPIDYAF 252
>sp|VP2_ROTH6|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 MINPIIYAF 9
+++PI YAF
Sbjct: 244 ILHPIDYAF 252
>sp|VP2_ROT41|INNER capsid protein VP2|Rotavirus A (isolate
Query: 1 MINPIIYAF 9
+++PI YAF
Sbjct: 244 ILHPIDYAF 252
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MINPIIYA 8
+IN IIY+
Sbjct: 2017 LINTIIYS 2024
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MINPIIYA 8
+IN IIY+
Sbjct: 2016 LINTIIYS 2023
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MINPIIYA 8
+IN IIY+
Sbjct: 2016 LINTIIYS 2023
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MINPIIYA 8
+IN IIY+
Sbjct: 2016 LINTIIYS 2023
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MINPIIYA 8
+IN IIY+
Sbjct: 2017 LINTIIYS 2024
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MINPIIYA 8
+IN IIY+
Sbjct: 2014 LINTIIYS 2021
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MINPIIYA 8
+IN IIY+
Sbjct: 2016 LINTIIYS 2023
>sp|VP2_ROTHD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 MINPIIYAF 9
+++PI YAF
Sbjct: 243 ILHPIDYAF 251
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MINPIIYA 8
+IN IIY+
Sbjct: 2016 LINTIIYS 2023
>sp|VP2_ROTHS|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 MINPIIYAF 9
+++PI YAF
Sbjct: 243 ILHPIDYAF 251
>sp|VP2_ROTHL|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 MINPIIYAF 9
+++PI YAF
Sbjct: 243 ILHPIDYAF 251
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MINPIIYA 8
+IN IIY+
Sbjct: 1850 LINTIIYS 1857
>sp|US28_HCMVM|ENVELOPE protein US28|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 INPIIYAF 9
+NP++Y F
Sbjct: 286 LNPLLYVF 293
>sp|US28_HCMVT|G-PROTEIN coupled receptor homolog US28|Human cytomegalovirus (strain Towne)
Query: 2 INPIIYAF 9
+NP++Y F
Sbjct: 286 LNPLLYVF 293
>sp|US28_HCMVA|G-PROTEIN coupled receptor homolog US28|Human cytomegalovirus (strain AD169)
Query: 2 INPIIYAF 9
+NP++Y F
Sbjct: 286 LNPLLYVF 293
60|Sequence|296|305|IYAFRNQDVQ
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 2 YAFRNQDV 9
Y+F NQD+
Sbjct: 593 YSFENQDI 600
>sp|NSP1_ROT41|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 2 YAFRNQD 8
YAFRN D
Sbjct: 329 YAFRNMD 335
>sp|HEMA_I85A6|HEMAGGLUTININ A virus (strain A/Starling/Victoria/5156/1985
Query: 2 YAFRNQDVQ 10
Y FR+Q+ Q
Sbjct: 364 YGFRHQNAQ 372
>sp|HEMA_I85A3|HEMAGGLUTININ A virus (strain A/Chicken/Victoria/1/1985
Query: 2 YAFRNQDVQ 10
Y FR+Q+ Q
Sbjct: 364 YGFRHQNAQ 372
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 2 YAFRNQDVQ 10
Y FR+Q+ Q
Sbjct: 361 YGFRHQNAQ 369
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 2 YAFRNQDVQ 10
Y FR+Q+ Q
Sbjct: 364 YCFRHQNAQ 372
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 IYAFRNQDVQ 10
+YA RN D Q
Sbjct: 4165 VYAMRNFDEQ 4174
>sp|PG172_VARV|PROTEIN A43|Variola virus
Query: 1 IYAFRNQDVQ 10
I+ FR++DV+
Sbjct: 24 IFRFRSEDVE 33
>sp|PG172_VAR67|PROTEIN A43|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 IYAFRNQDVQ 10
I+ FR++DV+
Sbjct: 24 IFRFRSEDVE 33
>sp|NEF_HV19N|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 IYAFRNQDV 9
IY+ R QD+
Sbjct: 102 IYSKRRQDI 110
>sp|UL95_HCMVT|PROTEIN UL95|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 YAFRNQD 8
YA RN D
Sbjct: 246 YALRNAD 252
>sp|UL95_HCMVM|PROTEIN UL95|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 YAFRNQD 8
YA RN D
Sbjct: 246 YALRNAD 252
>sp|UL95_HCMVA|PROTEIN UL95|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 YAFRNQD 8
YA RN D
Sbjct: 246 YALRNAD 252
>sp|BRRF2_EBVG|TEGUMENT protein BRRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 AFRNQD 8
AFRN D
Sbjct: 265 AFRNSD 270
>sp|BRRF2_EBVB9|TEGUMENT protein BRRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 AFRNQD 8
AFRN D
Sbjct: 265 AFRNSD 270
>sp|BRRF2_EBVA8|TEGUMENT protein BRRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 AFRNQD 8
AFRN D
Sbjct: 265 AFRNSD 270
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 1 IYAFRNQDV 9
I+AF N D+
Sbjct: 1096 IHAFTNTDI 1104
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 IYAFRNQDV 9
I+AF N D+
Sbjct: 1096 IHAFTNADI 1104
61|Sequence|301|310|NQDVQKVLWA
>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67
Query: 1 NQDVQKVLWA 10
N D Q+++WA
Sbjct: 122 NPDTQRLVWA 131
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 1 NQDVQKVLWA 10
N D Q+++WA
Sbjct: 119 NPDTQRLVWA 128
>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33
Query: 1 NQDVQKVLWA 10
N D Q+++WA
Sbjct: 93 NPDTQRLVWA 102
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 1 NQDVQKVLWA 10
N D Q+++WA
Sbjct: 92 NPDTQRLVWA 101
>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180
Query: 1 NQDVQKVLWA 10
N D Q+++WA
Sbjct: 92 NPDTQRLVWA 101
>sp|VL1_HPV70|MAJOR capsid protein L1|Human papillomavirus type 70
Query: 1 NQDVQKVLWA 10
N D Q+++WA
Sbjct: 92 NPDTQRLVWA 101
>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68
Query: 1 NQDVQKVLWA 10
N D Q+++WA
Sbjct: 92 NPDTQRMVWA 101
>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57
Query: 3 DVQKVLWA 10
D Q++LWA
Sbjct: 110 DTQRLLWA 117
>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a
Query: 3 DVQKVLWA 10
D Q++LWA
Sbjct: 109 DTQRLLWA 116
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 3 DVQKVLWA 10
D Q++LWA
Sbjct: 203 DTQRLLWA 210
>sp|MATRX_MEASY|MATRIX protein|Measles virus (strain Yamagata-1) (MeV)
Query: 1 NQDVQKVLW 9
N+D+ ++LW
Sbjct: 238 NEDLNRLLW 246
>sp|MATRX_MEASU|MATRIX protein|Measles virus (strain Hu2) (MeV)
Query: 1 NQDVQKVLW 9
N+D+ ++LW
Sbjct: 288 NEDLNRLLW 296
>sp|MATRX_MEASH|MATRIX protein|Measles virus (strain Halle) (MeV)
Query: 1 NQDVQKVLW 9
N+D+ ++LW
Sbjct: 288 NEDLNRLLW 296
>sp|MATRX_MEASE|MATRIX protein|Measles virus (strain Edmonston) (MeV)
Query: 1 NQDVQKVLW 9
N+D+ ++LW
Sbjct: 288 NEDLNRLLW 296
>sp|MATRX_MEASC|MATRIX protein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 NQDVQKVLW 9
N+D+ ++LW
Sbjct: 288 NEDLNRLLW 296
>sp|MATRX_MEASB|MATRIX protein|Measles virus (strain Biken) (MeV)
Query: 1 NQDVQKVLW 9
N+D+ ++LW
Sbjct: 288 NEDLNRLLW 296
>sp|MATRX_MEASA|MATRIX protein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 NQDVQKVLW 9
N+D+ ++LW
Sbjct: 288 NEDLNRLLW 296
>sp|VL1_HPV26|MAJOR capsid protein L1|Human papillomavirus type 26
Query: 1 NQDVQKVLWA 10
N D ++++WA
Sbjct: 91 NPDTERLVWA 100
>sp|VL1_HPV62|MAJOR capsid protein L1|Human papillomavirus 62
Query: 1 NQDVQKVLWA 10
N D ++++WA
Sbjct: 92 NPDTERMVWA 101
>sp|VL1_HPV61|MAJOR capsid protein L1|Human papillomavirus type 61
Query: 1 NQDVQKVLWA 10
N D ++++WA
Sbjct: 94 NPDTERMVWA 103
>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28
Query: 1 NQDVQKVLWA 10
N D ++++WA
Sbjct: 92 NPDAERLVWA 101
>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10
Query: 1 NQDVQKVLWA 10
N D ++++WA
Sbjct: 120 NPDAERLVWA 129
>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3
Query: 1 NQDVQKVLWA 10
N D ++++WA
Sbjct: 120 NPDAERLVWA 129
>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)
Query: 5 QKVLWA 10
QK+LWA
Sbjct: 51 QKLLWA 56
>sp|GE_HHV11|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain 17)
Query: 5 QKVLWA 10
QK+LWA
Sbjct: 51 QKLLWA 56
>sp|MATRX_MEASI|MATRIX protein|Measles virus (strain IP-3-Ca) (MeV)
Query: 1 NQDVQKVLW 9
N+D ++LW
Sbjct: 288 NEDPNRLLW 296
>sp|PG143_VAR67|VIRION membrane protein OPG143|Variola virus (isolate
Query: 1 NQDVQK 6
NQDVQ+
Sbjct: 283 NQDVQR 288
>sp|PG143_VACCC|VIRION membrane protein OPG143|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 NQDVQK 6
NQDVQ+
Sbjct: 283 NQDVQR 288
>sp|PG143_MONPV|VIRION membrane protein OPG143|Monkeypox virus (MPXV)
Query: 1 NQDVQK 6
NQDVQ+
Sbjct: 283 NQDVQR 288
>sp|A16_VACCT|VIRION membrane protein A16|Vaccinia virus (strain Tian Tan)
Query: 1 NQDVQK 6
NQDVQ+
Sbjct: 283 NQDVQR 288
>sp|A16_VACCA|VIRION membrane protein A16|Vaccinia virus (strain Ankara) (VACV)
Query: 1 NQDVQK 6
NQDVQ+
Sbjct: 283 NQDVQR 288
>sp|VL1_HPV34|MAJOR capsid protein L1|Human papillomavirus type 34
Query: 1 NQDVQKVLWA 10
N D ++++WA
Sbjct: 117 NPDKERLVWA 126
>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56
Query: 1 NQDVQKVLWA 10
N D ++++WA
Sbjct: 126 NPDQERLVWA 135
>sp|VL1_HPV53|MAJOR capsid protein L1|Human papillomavirus type 53
Query: 1 NQDVQKVLWA 10
N D ++++WA
Sbjct: 90 NPDQERLVWA 99
>sp|VL1_HPV66|MAJOR capsid protein L1|Human papillomavirus 66
Query: 1 NQDVQKVLWA 10
N D ++++WA
Sbjct: 91 NPDQERLVWA 100
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 3 DVQKVLW 9
DVQ V W
Sbjct: 1705 DVQAVAW 1711
>sp|BDLF2_EBVG|PROTEIN BDLF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 QDVQKVL 8
QD+Q+VL
Sbjct: 318 QDMQRVL 324
>sp|BDLF2_EBVB9|PROTEIN BDLF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 QDVQKVL 8
QD+Q+VL
Sbjct: 318 QDMQRVL 324
>sp|BDLF2_EBVA8|PROTEIN BDLF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 QDVQKVL 8
QD+Q+VL
Sbjct: 318 QDMQRVL 324
>sp|TRM1_HHV6Z|TRIPARTITE terminase subunit 1|Human herpesvirus 6B (strain Z29)
Query: 3 DVQKVLW 9
D+QK +W
Sbjct: 607 DMQKKMW 613
>sp|TRM1_HHV6U|TRIPARTITE terminase subunit 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 DVQKVLW 9
D+QK +W
Sbjct: 607 DMQKKMW 613
>sp|VL1_HPV50|MAJOR capsid protein L1|Human papillomavirus type 50
Query: 1 NQDVQKVLW 9
N D ++++W
Sbjct: 91 NSDTERLVW 99
>sp|VL1_HPV09|MAJOR capsid protein L1|Human papillomavirus 9
Query: 1 NQDVQKVLWA 10
N D ++++WA
Sbjct: 93 NPDKERLVWA 102
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 VQKVLW 9
VQ++LW
Sbjct: 522 VQRLLW 527
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 VQKVLW 9
VQ++LW
Sbjct: 522 VQRLLW 527
>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b
Query: 1 NQDVQKVLWA 10
N D ++++WA
Sbjct: 93 NPDKERLVWA 102
>sp|UL24_HHV8P|PROTEIN UL24 homolog|Human herpesvirus 8 type P
Query: 1 NQDVQKVL 8
N D++KVL
Sbjct: 181 NADIRKVL 188
>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47
Query: 1 NQDVQKVLWA 10
N D ++++WA
Sbjct: 93 NPDKERLVWA 102
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 1 NQDVQKVLWA 10
N D ++++WA
Sbjct: 93 NPDKERLVWA 102
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 1 NQDVQKVLWA 10
N D ++++WA
Sbjct: 93 NPDKERLVWA 102
>sp|VL1_HPV12|MAJOR capsid protein L1|Human papillomavirus 12
Query: 1 NQDVQKVLWA 10
N D ++++WA
Sbjct: 93 NPDRERLVWA 102
>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8
Query: 1 NQDVQKVLWA 10
N D ++++WA
Sbjct: 93 NPDKERLVWA 102
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 1 NQDVQKVLWA 10
N D ++++WA
Sbjct: 93 NPDKERLVWA 102
>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5
Query: 1 NQDVQKVLWA 10
N D ++++WA
Sbjct: 93 NPDKERLVWA 102
>sp|UL95_HCMVT|PROTEIN UL95|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 DVQKVLW 9
DV+ +LW
Sbjct: 305 DVEALLW 311
>sp|UL95_HCMVM|PROTEIN UL95|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 DVQKVLW 9
DV+ +LW
Sbjct: 305 DVEALLW 311
>sp|UL95_HCMVA|PROTEIN UL95|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 DVQKVLW 9
DV+ +LW
Sbjct: 305 DVEALLW 311
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 QDVQKVL 8
+DVQ+VL
Sbjct: 970 EDVQRVL 976
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 3 DVQKVLW 9
D++ +LW
Sbjct: 1965 DIEGILW 1971
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 QDVQKVL 8
+DVQ+VL
Sbjct: 969 EDVQRVL 975
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 QDVQKVL 8
+DVQ+VL
Sbjct: 969 EDVQRVL 975
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 3 DVQKVLW 9
D++ +LW
Sbjct: 1965 DIEGILW 1971
>sp|FUS_MEASZ|FUSION glycoprotein F0|Measles virus (strain Edmonston-Zagreb vaccine)
Query: 1 NQDVQKVL 8
NQD K+L
Sbjct: 405 NQDPDKIL 412
>sp|FUS_MEASY|FUSION glycoprotein F0|Measles virus (strain Yamagata-1) (MeV)
Query: 1 NQDVQKVL 8
NQD K+L
Sbjct: 405 NQDPDKIL 412
>sp|FUS_MEASP|FUSION glycoprotein F0|Measles virus (strain Philadelphia-26) (MeV)
Query: 1 NQDVQKVL 8
NQD K+L
Sbjct: 405 NQDPDKIL 412
>sp|FUS_MEASL|FUSION glycoprotein F0|Measles virus (strain Leningrad-16) (MeV)
Query: 1 NQDVQKVL 8
NQD K+L
Sbjct: 405 NQDPDKIL 412
>sp|FUS_MEASH|FUSION glycoprotein F0|Measles virus (strain Halle) (MeV)
Query: 1 NQDVQKVL 8
NQD K+L
Sbjct: 405 NQDPDKIL 412
>sp|FUS_MEASF|FUSION glycoprotein F0|Measles virus (strain Edmonston B)
Query: 1 NQDVQKVL 8
NQD K+L
Sbjct: 405 NQDPDKIL 412
>sp|FUS_MEASE|FUSION glycoprotein F0|Measles virus (strain Edmonston) (MeV)
Query: 1 NQDVQKVL 8
NQD K+L
Sbjct: 405 NQDPDKIL 412
>sp|FUS_MEASC|FUSION glycoprotein F0|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 NQDVQKVL 8
NQD K+L
Sbjct: 405 NQDPDKIL 412
>sp|FUS_MEASA|FUSION glycoprotein F0|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 NQDVQKVL 8
NQD K+L
Sbjct: 405 NQDPDKIL 412
62|Sequence|306|315|KVLWAVCCCC
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 3 LWAVCC 8
LWAV C
Sbjct: 2903 LWAVLC 2908
>sp|FUS_MEASZ|FUSION glycoprotein F0|Measles virus (strain Edmonston-Zagreb vaccine)
Query: 6 VCCC 9
+CCC
Sbjct: 514 ICCC 517
>sp|FUS_MEASP|FUSION glycoprotein F0|Measles virus (strain Philadelphia-26) (MeV)
Query: 6 VCCC 9
+CCC
Sbjct: 514 ICCC 517
>sp|FUS_MEASL|FUSION glycoprotein F0|Measles virus (strain Leningrad-16) (MeV)
Query: 6 VCCC 9
+CCC
Sbjct: 514 ICCC 517
>sp|FUS_MEASH|FUSION glycoprotein F0|Measles virus (strain Halle) (MeV)
Query: 6 VCCC 9
+CCC
Sbjct: 514 ICCC 517
>sp|FUS_MEASF|FUSION glycoprotein F0|Measles virus (strain Edmonston B)
Query: 6 VCCC 9
+CCC
Sbjct: 514 ICCC 517
>sp|FUS_MEASE|FUSION glycoprotein F0|Measles virus (strain Edmonston) (MeV)
Query: 6 VCCC 9
+CCC
Sbjct: 514 ICCC 517
>sp|FUS_MEASC|FUSION glycoprotein F0|Measles virus (strain Ichinose-B95a) (MeV)
Query: 6 VCCC 9
+CCC
Sbjct: 514 ICCC 517
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 KVLWAVC 7
KV WA C
Sbjct: 1010 KVCWAKC 1016
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 KVLWAVC 7
KV WA C
Sbjct: 1009 KVCWAKC 1015
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 KVLWAVC 7
KV WA C
Sbjct: 1012 KVCWAKC 1018
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 KVLWAVC 7
KV WA C
Sbjct: 1010 KVCWAKC 1016
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 2 VLWAVCC 8
++WAV C
Sbjct: 1938 LVWAVTC 1944
>sp|FUS_MEASI|FUSION glycoprotein F0|Measles virus (strain IP-3-Ca) (MeV)
Query: 6 VCCC 9
+CCC
Sbjct: 517 ICCC 520
>sp|FUS_MEASA|FUSION glycoprotein F0|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 6 VCCC 9
+CCC
Sbjct: 514 ICCC 517
>sp|FUS_MEASY|FUSION glycoprotein F0|Measles virus (strain Yamagata-1) (MeV)
Query: 6 VCCC 9
+CCC
Sbjct: 514 ICCC 517
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 3 LWAVCCCC 10
LW C C
Sbjct: 517 LWLFMCTC 524
>sp|E311_ADE05|EARLY E3A 10.5 kDa glycoprotein|Human adenovirus C serotype 5
Query: 2 VLWAVCC 8
++W +CC
Sbjct: 48 IMWLICC 54
>sp|NCAP_PIV5|NUCLEOPROTEIN virus 5 (strain W3)
Query: 4 WAVCCCC 10
W V C C
Sbjct: 175 WIVTCKC 181
>sp|NCAP_PI2HT|NUCLEOPROTEIN parainfluenza 2 virus (strain
Query: 4 WAVCCCC 10
W V C C
Sbjct: 175 WIVTCKC 181
>sp|E311_ADE06|EARLY E3A 11.6 kDa glycoprotein|Human adenovirus C serotype 6
Query: 2 VLWAVCC 8
++W +CC
Sbjct: 55 IMWLICC 61
>sp|ADP_ADE02|ADENOVIRUS death protein|Human adenovirus C serotype 2
Query: 2 VLWAVCC 8
++W +CC
Sbjct: 55 IMWLICC 61
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 2 VLWAVCCC 9
+ W CC
Sbjct: 1203 IRWIAACC 1210
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 2 VLWAVCCC 9
+ W CC
Sbjct: 1203 IRWIAACC 1210
>sp|UNG_HHV8P|URACIL-DNA glycosylase|Human herpesvirus 8 type P
Query: 1 KVLWAVCCC 9
K++W CC
Sbjct: 67 KLMWWSHCC 75
>sp|NRAM_I45A0|NEURAMINIDASE A virus (strain A/USA:Huston/AA/1945
Query: 2 VLWAVCCC 9
V W+ C C
Sbjct: 177 VAWSACAC 184
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 3 LWAVCCCC 10
+W + CC
Sbjct: 108 VWPIFFCC 115
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 LWAVCCCC 10
+W + CC
Sbjct: 108 VWPIFFCC 115
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 3 LWAVCCCC 10
+W + C C
Sbjct: 640 VWELLCLC 647
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 6 VCCC 9
+CCC
Sbjct: 796 ICCC 799
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 6 VCCC 9
+CCC
Sbjct: 796 ICCC 799
>sp|NCAP_PI4HB|NUCLEOPROTEIN parainfluenza 4b virus (strain
Query: 3 LWAVCCCC 10
+W + C C
Sbjct: 174 IWIMVCKC 181
63|Sequence|311|320|VCCCCSSSKI
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 CCCC 5
CCCC
Sbjct: 3766 CCCC 3769
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 CCCC 5
CCCC
Sbjct: 3766 CCCC 3769
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 2 CCCCSSSKI 10
CC C S+K+
Sbjct: 1337 CCDCGSTKL 1345
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 3 CCCSS 7
CCC++
Sbjct: 670 CCCAA 674
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 3 CCCSS 7
CCC++
Sbjct: 670 CCCAA 674
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 1 VCCCCSS 7
V CCC S
Sbjct: 794 VLCCCKS 800
>sp|HBSAG_HBVE4|LARGE envelope protein|Hepatitis B virus genotype E
Query: 3 CCCS 6
CCCS
Sbjct: 310 CCCS 313
>sp|HBSAG_HBVE2|LARGE envelope protein|Hepatitis B virus genotype E
Query: 3 CCCS 6
CCCS
Sbjct: 310 CCCS 313
>sp|HBSAG_HBVE1|LARGE envelope protein|Hepatitis B virus genotype E
Query: 3 CCCS 6
CCCS
Sbjct: 310 CCCS 313
>sp|IR09_HCMVA|UNCHARACTERIZED protein IRL9|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CCCCSS 7
C CC S
Sbjct: 8 CFCCGS 13
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 CCCSS 7
CCC S
Sbjct: 130 CCCGS 134
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 CCCSS 7
CCC S
Sbjct: 130 CCCGS 134
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 3 CCCSS 7
CCCS+
Sbjct: 1136 CCCST 1140
>sp|E434_ADE12|EARLY E4 34 kDa protein|Human adenovirus A serotype 12
Query: 1 VCCCCSSSKI 10
VC CC++ +
Sbjct: 89 VCMCCATINV 98
64|Sequence|316|330|SSSKIPFRSRSPSDV
>sp|GL_HHV6Z|ENVELOPE glycoprotein L|Human herpesvirus 6B (strain Z29)
Query: 2 SSKIPFRSRSPS 13
+SK+PFRS P+
Sbjct: 233 NSKLPFRSSRPT 244
>sp|GL_HHV6U|ENVELOPE glycoprotein L|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 SSKIPFRSRSPS 13
+SK+PFRS P+
Sbjct: 233 NSKLPFRSSRPT 244
>sp|US23_HCMVM|PROTEIN US23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 KIPFRSRSPSDV 15
+ PF +R P DV
Sbjct: 162 QTPFATRVPHDV 173
>sp|US23_HCMVA|TEGUMENT protein US23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 KIPFRSRSPSDV 15
+ PF +R P DV
Sbjct: 162 QTPFATRVPHDV 173
>sp|VL2_HPV66|MINOR capsid protein L2|Human papillomavirus 66
Query: 3 SKIPFRSRSPSDV 15
S PF +SPSDV
Sbjct: 414 STWPFVPQSPSDV 426
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 PFRSRSPSDV 15
PFR R+P V
Sbjct: 754 PFRERNPEIV 763
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 PFRSRSPSDV 15
PFR R+P V
Sbjct: 754 PFRERNPEIV 763
>sp|PG070_VARV|PROTEIN OPG070|Variola virus
Query: 8 RSRSPSD 14
R+RSPSD
Sbjct: 210 RARSPSD 216
>sp|PG070_VAR67|PROTEIN OPG070|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 8 RSRSPSD 14
R+RSPSD
Sbjct: 210 RARSPSD 216
>sp|PG070_VACCC|PROTEIN OPG070|Vaccinia virus (strain Copenhagen) (VACV)
Query: 8 RSRSPSD 14
R+RSPSD
Sbjct: 210 RARSPSD 216
>sp|VU55_HHV6Z|UNCHARACTERIZED protein U55|Human herpesvirus 6B (strain Z29)
Query: 6 PFRSRSPSDV 15
PFRS S SD+
Sbjct: 420 PFRSLSNSDM 429
>sp|PG070_MONPV|PROTEIN OPG070|Monkeypox virus (MPXV)
Query: 8 RSRSPSD 14
R+RSPSD
Sbjct: 210 RARSPSD 216
>sp|VU55_HHV6U|UNCHARACTERIZED protein U55|Human herpesvirus 6A (strain Uganda-1102)
Query: 6 PFRSRSPSDV 15
PFRS S SD+
Sbjct: 360 PFRSLSNSDM 369
>sp|VL2_HPV63|MINOR capsid protein L2|Human papillomavirus type 63
Query: 5 IPFRSRSP 12
IPFR R P
Sbjct: 438 IPFRPRRP 445
>sp|NEC1_HHV6U|NUCLEAR egress protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 KIPFRSRSPSDV 15
K+P + P DV
Sbjct: 60 KLPITGKEPIDV 71
>sp|NP_ADE40|PRE-HISTONE-LIKE nucleoprotein|Human adenovirus F serotype 40
Query: 1 SSSKIPFRSRSP 12
S ++P RSR P
Sbjct: 172 SGVRVPVRSRPP 183
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 7 FRSRSPSDV 15
RSRS SD+
Sbjct: 543 LRSRSNSDI 551
>sp|AN_EBVG|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 7 FRSRSPSD 14
FR RSP D
Sbjct: 392 FRKRSPLD 399
>sp|AN_EBVA8|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 7 FRSRSPSD 14
FR RSP D
Sbjct: 392 FRKRSPLD 399
>sp|AN_EBVB9|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 7 FRSRSPSD 14
FR RSP D
Sbjct: 392 FRKRSPLD 399
>sp|F_HCV77|F protein|Hepatitis C virus genotype 1a
Query: 3 SKIPFRSRSPS 13
S IP R+ SP+
Sbjct: 123 SSIPLRAASPT 133
>sp|NEC1_HHV6Z|NUCLEAR egress protein 1|Human herpesvirus 6B (strain Z29)
Query: 4 KIPFRSRSPSDV 15
K+P + P DV
Sbjct: 60 KLPITGKEPIDV 71
>sp|NEC1_HHV6H|NUCLEAR egress protein 1|Human herpesvirus 6B (HHV-6 variant
Query: 4 KIPFRSRSPSDV 15
K+P + P DV
Sbjct: 60 KLPITGKEPIDV 71
>sp|NP_ADE05|PRE-HISTONE-LIKE nucleoprotein|Human adenovirus C serotype 5
Query: 1 SSSKIPFRSRSPSD 14
S ++P R+R P +
Sbjct: 185 SGLRVPVRTRPPRN 198
>sp|NP_ADE02|PRE-HISTONE-LIKE nucleoprotein|Human adenovirus C serotype 2
Query: 1 SSSKIPFRSRSPSD 14
S ++P R+R P +
Sbjct: 185 SGLRVPVRTRPPRN 198
65|Sequence|321|330|PFRSRSPSDV
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 PFRSRSPSDV 10
PFR R+P V
Sbjct: 754 PFRERNPEIV 763
>sp|US23_HCMVA|TEGUMENT protein US23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PFRSRSPSDV 10
PF +R P DV
Sbjct: 164 PFATRVPHDV 173
>sp|US23_HCMVM|PROTEIN US23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PFRSRSPSDV 10
PF +R P DV
Sbjct: 164 PFATRVPHDV 173
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 PFRSRSPSDV 10
PFR R+P V
Sbjct: 754 PFRERNPEIV 763
>sp|VL2_HPV66|MINOR capsid protein L2|Human papillomavirus 66
Query: 1 PFRSRSPSDV 10
PF +SPSDV
Sbjct: 417 PFVPQSPSDV 426
>sp|PG070_VARV|PROTEIN OPG070|Variola virus
Query: 3 RSRSPSD 9
R+RSPSD
Sbjct: 210 RARSPSD 216
>sp|PG070_VAR67|PROTEIN OPG070|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 RSRSPSD 9
R+RSPSD
Sbjct: 210 RARSPSD 216
>sp|PG070_VACCC|PROTEIN OPG070|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 RSRSPSD 9
R+RSPSD
Sbjct: 210 RARSPSD 216
>sp|PG070_MONPV|PROTEIN OPG070|Monkeypox virus (MPXV)
Query: 3 RSRSPSD 9
R+RSPSD
Sbjct: 210 RARSPSD 216
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 2 FRSRSPSDV 10
RSRS SD+
Sbjct: 543 LRSRSNSDI 551
>sp|VU55_HHV6Z|UNCHARACTERIZED protein U55|Human herpesvirus 6B (strain Z29)
Query: 1 PFRSRSPSDV 10
PFRS S SD+
Sbjct: 420 PFRSLSNSDM 429
>sp|VU55_HHV6U|UNCHARACTERIZED protein U55|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PFRSRSPSDV 10
PFRS S SD+
Sbjct: 360 PFRSLSNSDM 369
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 2 FRSRSPSDV 10
FRS +P DV
Sbjct: 371 FRSFNPLDV 379
>sp|AN_EBVA8|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 FRSRSPSD 9
FR RSP D
Sbjct: 392 FRKRSPLD 399
>sp|AN_EBVG|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 FRSRSPSD 9
FR RSP D
Sbjct: 392 FRKRSPLD 399
>sp|AN_EBVB9|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 FRSRSPSD 9
FR RSP D
Sbjct: 392 FRKRSPLD 399
>sp|VE2_HPV36|REGULATORY protein E2|Human papillomavirus 36
Query: 3 RSRSPS 8
RSRSPS
Sbjct: 295 RSRSPS 300