FLNB_HUMAN Blast Output
Archaea
1|Sequence|1|10|MPVTEKDLAE

>sp|Y488_METKA|PROTEIN MK0488|Methanopyrus kandleri (strain AV19 /

Query: 2 PVTEKDLAE 10
PV E+DLAE
Sbjct: 197 PVRERDLAE 205


>sp|SYL_HALSA|LEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 PVTEKDL 8
PVTE+DL
Sbjct: 185 PVTERDL 191


>sp|Y878_METJA|UNCHARACTERIZED lipoprotein MJ0878|Methanocaldococcus jannaschii (strain ATCC

Query: 1 MPVTEKDLAE 10
MPV+EK++ +
Sbjct: 39 MPVSEKNITK 48


>sp|ADEC_META3|ADENINE deaminase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 PVTEKDLAE 10
P+T KD+ E
Sbjct: 159 PITSKDIEE 167


>sp|SYT_THEVO|THREONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 PVTEKDLAE 10
P+TE+DL++
Sbjct: 98 PITEEDLSK 106


>sp|IF2P_METS5|PROBABLE translation initiation factor IF-2|Metallosphaera sedula (strain

Query: 2 PVTEKDLAE 10
P+T++DL E
Sbjct: 391 PITKRDLIE 399


>sp|BGAL_SACSH|BETA-GALACTOSIDASE shibatae (strain ATCC 51178

Query: 2 PVTEKDL 8
P+TEKD+
Sbjct: 269 PLTEKDV 275


>sp|ACDB2_PYRFU|ACETATE--COA ligase [ADP-forming] II subunit|Pyrococcus furiosus (strain ATCC

Query: 1 MPVTEKD 7
+P+TEKD
Sbjct: 156 IPITEKD 162


>sp|Y661_METJA|UNCHARACTERIZED protein MJ0661|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VTEKDLAE 10
VT+KDLA+
Sbjct: 40 VTKKDLAK 47


>sp|HMED_ARCPA|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 2 PVTEKDL 8
P+T+KD+
Sbjct: 23 PITQKDI 29


>sp|IF2P_SULTO|PROBABLE translation initiation factor IF-2|Sulfurisphaera tokodaii (strain

Query: 2 PVTEKDLAE 10
P+T+KD+ E
Sbjct: 394 PITKKDITE 402


>sp|MPTA_METM6|GTP cyclohydrolase MptA|Methanococcus maripaludis (strain C6 /

Query: 2 PVTEKDLAE 10
PVT+KD E
Sbjct: 119 PVTQKDSQE 127


>sp|MPTA_METM7|GTP cyclohydrolase MptA|Methanococcus maripaludis (strain C7 /

Query: 2 PVTEKDLAE 10
PVT+KD E
Sbjct: 119 PVTQKDSQE 127


>sp|MPTA_METM5|GTP cyclohydrolase MptA|Methanococcus maripaludis (strain C5 /

Query: 2 PVTEKDLAE 10
PVT+KD E
Sbjct: 119 PVTQKDSQE 127


>sp|LEUC2_METKA|3-ISOPROPYLMALATE dehydratase large subunit 2|Methanopyrus kandleri (strain AV19 /

Query: 2 PVTEKDLA 9
P T KDLA
Sbjct: 168 PATAKDLA 175


>sp|HICDH_PYRHO|ISOCITRATE/HOMOISOCITRATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 MPVTEKDLAE 10
+P+ E+DL E
Sbjct: 48 VPIREEDLEE 57


>sp|TRMJ_METJA|TRNA (cytidine-2'-O-)-methyltransferase TrmJ|Methanocaldococcus

Query: 1 MPVTEKDLAE 10
+P+T K+LA+
Sbjct: 92 VPITPKELAD 101




2|Sequence|6|15|KDLAEDAPWK

>sp|Y3507_METJA|UNCHARACTERIZED protein MJECL07|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DLAEDAPWK 10
DLAED WK
Sbjct: 148 DLAEDLGWK 156


>sp|DADD_METS3|5'-DEOXYADENOSINE deaminase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 KDLAEDAPW 9
KDL ED W
Sbjct: 192 KDLLEDVRW 200


>sp|G1PDH_STAMF|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Staphylothermus marinus (strain ATCC 43588

Query: 1 KDLAEDAPWK 10
K L E+A W+
Sbjct: 338 KGLTEEAAWR 347


>sp|Y1590_CALMQ|MEMO1 family protein Cmaq_1590|Caldivirga maquilingensis (strain ATCC

Query: 1 KDLAED 6
KDLAED
Sbjct: 124 KDLAED 129


>sp|SEPS_META3|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 KDLAEDAP 8
KDL +DAP
Sbjct: 23 KDLIKDAP 30


>sp|FAU1_THEPD|PROBABLE ribonuclease FAU-1|Thermofilum pendens (strain DSM 2475

Query: 1 KDLAEDAP 8
KD+ ED P
Sbjct: 463 KDIGEDLP 470


>sp|RTCB_PYRAE|TRNA-SPLICING ligase RtcB|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 LAEDAPW 9
++E+APW
Sbjct: 446 ISEEAPW 452




3|Sequence|11|20|DAPWKKIQQN

>sp|SYM_METMJ|METHIONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 DAPWKKIQQN 10
+APWK I+++
Sbjct: 453 NAPWKLIKED 462


>sp|SYV_PICTO|VALINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 DAPWKKI 7
D PWKKI
Sbjct: 491 DVPWKKI 497


>sp|SYC_METAC|CYSTEINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DAPWKKIQ 8
D+PW KI+
Sbjct: 199 DSPWGKIR 206


>sp|BIOF_META3|PUTATIVE 8-amino-7-oxononanoate synthase|Methanococcus aeolicus (strain ATCC

Query: 2 APWKKIQQN 10
AP KK+Q+N
Sbjct: 282 APTKKLQKN 290


>sp|Y1599_METJA|UNCHARACTERIZED protein MJ1599|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DAPWKK 6
D PWKK
Sbjct: 201 DLPWKK 206


>sp|CAS6_HALMT|CRISPR-ASSOCIATED endoribonuclease Cas6|Haloferax mediterranei (strain ATCC 33500

Query: 3 PWKKIQQ 9
PW KIQ+
Sbjct: 55 PWGKIQE 61


>sp|COFG_META3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DAPWKKIQQ 9
+APW KI++
Sbjct: 311 EAPWPKIEE 319


>sp|GLYA_PICTO|SERINE hydroxymethyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 DAPWKKIQQ 9
D WKK+Q+
Sbjct: 247 DDTWKKVQR 255


>sp|G1PDH_HALLT|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 DAPWK 5
DAPW+
Sbjct: 156 DAPWR 160


>sp|SYK2_METMA|LYSINE--TRNA ligase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 APWKKI 7
+PWK+I
Sbjct: 329 SPWKRI 334


>sp|SYK2_METAC|LYSINE--TRNA ligase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 APWKKI 7
+PWK+I
Sbjct: 329 SPWKRI 334


>sp|COFG_METKA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 DAPWKKIQQ 9
+APW +I++
Sbjct: 279 EAPWPEIEE 287


>sp|RS5_IGNH4|SMALL ribosomal subunit protein uS5|Ignicoccus hospitalis (strain KIN4/I

Query: 2 APWKKIQQ 9
APW +QQ
Sbjct: 203 APWDWVQQ 210


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 DAPWKKIQQN 10
+APWK I+ +
Sbjct: 452 NAPWKLIKTD 461


>sp|COFG_METTH|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 DAPWKKIQQ 9
+APW +I +
Sbjct: 273 EAPWPEIDE 281


>sp|SYC_STAMF|CYSTEINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 DAPWKK 6
DAPW K
Sbjct: 195 DAPWGK 200


>sp|TRIC_SULTO|PUTATIVE Tricorn-like protease C-terminal subunit|Sulfurisphaera tokodaii

Query: 4 WKKIQQN 10
WK +QQN
Sbjct: 488 WKLMQQN 494


>sp|PAN1_HALVD|PROTEASOME-ACTIVATING nucleotidase 1|Haloferax volcanii (strain ATCC 29605

Query: 4 WKKIQQ 9
W+KIQQ
Sbjct: 388 WEKIQQ 393




4|Sequence|16|25|KIQQNTFTRW

>sp|SYE_META3|GLUTAMATE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 IQQNTFTRW 10
I+ N FT W
Sbjct: 342 IKNNEFTGW 350




5|Sequence|21|30|TFTRWCNEHL

>sp|RIBL_METVS|FAD synthase|Methanococcus vannielii (strain ATCC 35089

Query: 4 RWCNEHL 10
RWCN+ L
Sbjct: 143 RWCNKEL 149


>sp|CCA_THEGJ|CCA-ADDING enzyme|Thermococcus gammatolerans (strain DSM 15229

Query: 3 TRWCNEHL 10
TRW NE+L
Sbjct: 143 TRWVNENL 150


>sp|Y818_METJA|UNCHARACTERIZED protein MJ0818|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 RWCNEH 9
+WC EH
Sbjct: 196 KWCEEH 201


>sp|RIBL_METV3|FAD synthase|Methanococcus voltae (strain ATCC BAA-1334

Query: 4 RWCNEHL 10
RWCN+ +
Sbjct: 165 RWCNKEI 171


>sp|RIBL_META3|FAD synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 RWCNEHL 10
RWCN+ +
Sbjct: 147 RWCNKKI 153


>sp|IF2P_CALMQ|PROBABLE translation initiation factor IF-2|Caldivirga maquilingensis

Query: 2 FTRWCNE 8
FT+W NE
Sbjct: 445 FTKWFNE 451


>sp|SYV_NATPD|VALINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 FTRWCNEH 9
F WC EH
Sbjct: 109 FREWCVEH 116


>sp|CCA_THEKO|CCA-ADDING enzyme|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 TRWCNEHL 10
T+W NE+L
Sbjct: 143 TKWVNENL 150


>sp|Y2147_ARCFU|UNCHARACTERIZED protein AF_2147|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TFTRWCNEHL 10
T T+W NE
Sbjct: 29 TVTKWLNEQF 38


>sp|DADD_METTH|5'-DEOXYADENOSINE deaminase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 RWCNEHL 10
RW N+H+
Sbjct: 81 RWLNDHI 87


>sp|GGR_METPE|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 FTRWC 6
F RWC
Sbjct: 162 FARWC 166


>sp|GGR_METHJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 FTRWC 6
F RWC
Sbjct: 162 FARWC 166


>sp|COBQ_METBF|PROBABLE cobyric acid synthase|Methanosarcina barkeri (strain Fusaro /

Query: 4 RWCNEH 9
R CNEH
Sbjct: 121 RLCNEH 126


>sp|FLAB1_THEKO|FLAGELLIN B1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 TRWCNEH 9
T W NEH
Sbjct: 151 TNWNNEH 157


>sp|Y973_METJA|UNCHARACTERIZED protein MJ0973|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 RWCN 7
RWCN
Sbjct: 257 RWCN 260


>sp|RFCL_STAMF|REPLICATION factor C large subunit|Staphylothermus marinus (strain ATCC 43588

Query: 1 TFTRWCNEHL 10
T W NEH+
Sbjct: 263 TMMIWINEHI 272


>sp|SIHH_METTH|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 RWCNEHL 10
RW EH+
Sbjct: 19 RWVQEHM 25


>sp|DCD_METS5|DCTP deaminase|Metallosphaera sedula (strain ATCC 51363

Query: 2 FTRWCNEHL 10
F W NEH+
Sbjct: 68 FVIWPNEHV 76


>sp|Y066_METJA|UNCHARACTERIZED protein MJ0066|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 RWCNE 8
RWC+E
Sbjct: 335 RWCSE 339


>sp|TYW3_ARCFU|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 4 RWCNEHL 10
RW NE L
Sbjct: 164 RWANEKL 170


>sp|KPTA_HYPBU|PROBABLE RNA 2'-phosphotransferase|Hyperthermus butylicus (strain DSM 5456

Query: 4 RWCNEHL 10
RW N HL
Sbjct: 73 RWRNRHL 79


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 RWCNEH 9
+W NEH
Sbjct: 922 KWINEH 927




6|Sequence|26|35|CNEHLKCVNK

>sp|Y941_METJA|TPR repeat-containing protein MJ0941|Methanocaldococcus jannaschii

Query: 1 CNEHLKCVNK 10
C+E LKC NK
Sbjct: 113 CDEALKCYNK 122


>sp|ACDA2_METKA|PUTATIVE acetyl-CoA decarbonylase/synthase complex subunit|Methanopyrus

Query: 3 EHLKCV 8
EHL+CV
Sbjct: 538 EHLRCV 543


>sp|Y089_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 5 LKCVNK 10
LKC+NK
Sbjct: 48 LKCINK 53


>sp|TRPE_METTM|ANTHRANILATE synthase component 1|Methanothermobacter marburgensis (strain ATCC

Query: 3 EHLKCVNK 10
E+L+C NK
Sbjct: 434 EYLECQNK 441


>sp|RRP4_SULAC|EXOSOME complex component Rrp4|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 HLKCVN 9
H+KC N
Sbjct: 194 HIKCAN 199


>sp|PURQ_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanocaldococcus jannaschii (strain ATCC

Query: 1 CNEHLKCV 8
CNE+ CV
Sbjct: 190 CNENQNCV 197


>sp|Y263_METJA|TPR repeat-containing protein MJ0263|Methanocaldococcus jannaschii

Query: 1 CNEHLKCVNK 10
+E L CVNK
Sbjct: 164 LDEALDCVNK 173




7|Sequence|31|40|KCVNKRIGNL

>sp|GLCDH_THEAC|GLUCOSE 1-dehydrogenase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KCVNKRIG 8
KC+N RIG
Sbjct: 98 KCINCRIG 105


>sp|GLCD2_PICTO|GLUCOSE/GALACTOSE 1-dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 1 KCVNKRIG 8
KCVN RIG
Sbjct: 97 KCVNCRIG 104


>sp|MPG1_SULAC|PUTATIVE mannose-1-phosphate guanyltransferase|Sulfolobus acidocaldarius

Query: 3 VNKRIGN 9
VN RIGN
Sbjct: 274 VNNRIGN 280


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KCVNKRIG 8
K +NKRIG
Sbjct: 927 KLMNKRIG 934


>sp|RADB_METST|DNA repair and recombination protein|Methanosphaera stadtmanae (strain

Query: 3 VNKRIGNL 10
+NKR+G L
Sbjct: 140 INKRLGRL 147


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KCVNKRIGNL 10
+C++ IGN+
Sbjct: 548 RCIDMLIGNI 557


>sp|HYPA_METS3|HYDROGENASE maturation factor HypA|Methanobrevibacter smithii (strain ATCC

Query: 1 KCVNKRIGNL 10
KC NKRI L
Sbjct: 98 KCGNKRISIL 107




8|Sequence|36|45|RIGNLQTDLS

>sp|SLAA_METS5|S-LAYER protein A|Metallosphaera sedula (strain ATCC 51363

Query: 2 IGNLQTD 8
+GN+QTD
Sbjct: 153 VGNVQTD 159




9|Sequence|41|50|QTDLSDGLRL

>sp|HIS8_SULTO|HISTIDINOL-PHOSPHATE aminotransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 DLSDGLRL 10
D++DG+RL
Sbjct: 25 DINDGIRL 32


>sp|THIL_METKA|THIAMINE-MONOPHOSPHATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 2 TDLSDGL 8
TD+SDGL
Sbjct: 214 TDISDGL 220


>sp|HIS8_SACS2|HISTIDINOL-PHOSPHATE aminotransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 TDLSDGLRL 10
TD+ +G+RL
Sbjct: 43 TDIKEGIRL 51


>sp|PMD_HALVD|PHOSPHOMEVALONATE decarboxylase|Haloferax volcanii (strain ATCC 29605

Query: 1 QTDLSDGLRL 10
+TDL D LR+
Sbjct: 166 ETDLEDDLRI 175


>sp|Y1427_HALMA|UNCHARACTERIZED protein rrnAC1427|Haloarcula marismortui (strain ATCC 43049

Query: 2 TDLSDGL 8
TDL+DGL
Sbjct: 144 TDLADGL 150


>sp|Y760_METJA|UNCHARACTERIZED protein MJ0760|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TDLSDGLR 9
TDL++GL+
Sbjct: 113 TDLTEGLK 120




10|Sequence|46|55|DGLRLIALLE

>sp|PCNA1_SULAC|DNA polymerase sliding clamp 1|Sulfolobus acidocaldarius (strain ATCC

Query: 1 DGLRLIAL 8
DG+RL+A+
Sbjct: 32 DGIRLVAV 39


>sp|PURL_CALMQ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 GLRLIALLE 10
GLR IALL+
Sbjct: 106 GLRPIALLD 114




11|Sequence|51|60|IALLEVLSQK

>sp|DPHB_METB6|DIPHTHINE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 IALLEVLSQK 10
I LLE ++QK
Sbjct: 179 ICLLEAMAQK 188


>sp|DHE2_PYRCJ|NAD(+)-DEPENDENT glutamate dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 LLEVLSQK 10
LLE++SQK
Sbjct: 271 LLEMISQK 278


>sp|CSL4_ARCFU|EXOSOME complex component Csl4|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IALLEVLSQK 10
IAL+EV S+K
Sbjct: 72 IALIEVSSKK 81




12|Sequence|56|65|VLSQKRMYRK

>sp|RL14_THEVO|LARGE ribosomal subunit protein uL14|Thermoplasma volcanium (strain

Query: 1 VLSQKRMYRK 10
V+ QKR YR+
Sbjct: 73 VIRQKRPYRR 82


>sp|RL14_THEAC|LARGE ribosomal subunit protein uL14|Thermoplasma acidophilum (strain

Query: 1 VLSQKRMYRK 10
V+ QKR YR+
Sbjct: 73 VIRQKRPYRR 82




13|Sequence|61|70|RMYRKYHQRP

>sp|Y1261_METTH|UPF0104 membrane protein MTH_1261|Methanothermobacter thermautotrophicus

Query: 1 RMYRKYHQR 9
R YRK H+R
Sbjct: 191 RFYRKNHER 199


>sp|LYSY_PYRHO|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 RMYRKYHQR 9
R+Y+ YH R
Sbjct: 190 RVYKPYHHR 198


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 2 MYRKYHQR 9
+Y KYH R
Sbjct: 556 VYEKYHDR 563


>sp|LYSY_THEKO|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 RMYRKYHQR 9
R+Y+ YH R
Sbjct: 190 RVYKPYHHR 198


>sp|Y1470_META3|UNCHARACTERIZED solute-binding protein Maeo_1470|Methanococcus aeolicus (strain

Query: 1 RMYRKYH 7
++Y+KYH
Sbjct: 60 KIYKKYH 66


>sp|LYSY_PYRFU|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 RMYRKYHQR 9
R+Y+ YH R
Sbjct: 190 RVYKPYHHR 198


>sp|Y1533_METJA|UNCHARACTERIZED KH and PIN-domain containing|Methanocaldococcus jannaschii (strain

Query: 1 RMYRKY 6
R+YRKY
Sbjct: 559 RIYRKY 564


>sp|UDGB_PYRAE|TYPE-5 uracil-DNA glycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RMYRKYHQRP 10
R+Y YH P
Sbjct: 190 RVYASYHPSP 199


>sp|SYFB_ARCFU|PHENYLALANINE--TRNA ligase beta subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 YRKYHQRP 10
Y K+H+ P
Sbjct: 430 YNKHHEMP 437


>sp|LYSY_PYRAB|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 RMYRKYHQR 9
R+Y+ +H R
Sbjct: 190 RVYKPFHHR 198




14|Sequence|66|75|YHQRPTFRQM

>sp|TRPB2_AERPE|TRYPTOPHAN synthase beta chain 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 YHQRPTFR 8
YHQR FR
Sbjct: 366 YHQREVFR 373




15|Sequence|71|80|TFRQMQLENV

>sp|KCY_METST|CYTIDYLATE kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 FRQMQLEN 9
FRQM +EN
Sbjct: 35 FRQMAVEN 42


>sp|HEM3_THEVO|PROBABLE porphobilinogen deaminase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 TFRQMQLE 8
TF +MQ+E
Sbjct: 215 TFEEMQIE 222




16|Sequence|76|85|QLENVSVALE

>sp|SYC_THEKO|CYSTEINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LENVSVALE 10
LEN+ VA+E
Sbjct: 323 LENIRVAME 331


>sp|SYC_THEON|CYSTEINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 LENVSVALE 10
LEN+ VA+E
Sbjct: 323 LENIRVAME 331


>sp|TIAS_SACI2|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Saccharolobus islandicus

Query: 2 LENVSVALE 10
++NVS+ALE
Sbjct: 85 VKNVSLALE 93


>sp|SYC_PYRHO|CYSTEINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LENVSVALE 10
LEN+ +A+E
Sbjct: 323 LENIRIAME 331


>sp|SYE_METJA|GLUTAMATE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QLENVSVALE 10
+LENV+V L+
Sbjct: 224 ELENVAVRLK 233




17|Sequence|81|90|SVALEFLDRE

>sp|THIM_PYRAB|HYDROXYETHYLTHIAZOLE kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 VALEFLDR 9
VALE LDR
Sbjct: 105 VALEILDR 112


>sp|RRP4_METFV|EXOSOME complex component Rrp4|Methanothermus fervidus (strain ATCC 43054

Query: 3 ALEFLDRE 10
ALE +DRE
Sbjct: 196 ALEMIDRE 203




18|Sequence|86|95|FLDRESIKLV

>sp|APE1_SULTO|PROBABLE aminopeptidase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LDRESIKL 9
LD+ES+KL
Sbjct: 468 LDKESVKL 475


>sp|Y3528_METJA|UNCHARACTERIZED protein MJECL28|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FLDRESIKL 9
LDRE+IK+
Sbjct: 467 LLDRETIKI 475


>sp|TRPC_THEVO|INDOLE-3-GLYCEROL phosphate synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 FLDRESIKLV 10
FLD ESIK +
Sbjct: 129 FLDYESIKRI 138


>sp|HIS3_METVS|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanococcus vannielii (strain ATCC 35089

Query: 1 FLDRESIKL 9
F+D+ES+K+
Sbjct: 48 FMDKESLKM 56


>sp|HIS3_METVA|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanococcus vannielii

Query: 1 FLDRESIKL 9
F+D+ES+K+
Sbjct: 48 FMDKESLKM 56


>sp|PT1_HALVD|PHOSPHOENOLPYRUVATE-PROTEIN phosphotransferase|Haloferax volcanii (strain ATCC 29605

Query: 1 FLDRES 6
FLDRES
Sbjct: 294 FLDRES 299


>sp|GLYA_METJA|SERINE hydroxymethyltransferase|Methanocaldococcus jannaschii (strain

Query: 4 RESIKLV 10
RESIKL+
Sbjct: 22 RESIKLI 28


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 DRESIKLV 10
DRE +KLV
Sbjct: 618 DREKVKLV 625


>sp|Y912_ARCFU|UNCHARACTERIZED protein AF_0912|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FLDRESIKL 9
F+D+ES+ L
Sbjct: 25 FVDKESVNL 33




19|Sequence|91|100|SIKLVSIDSK

>sp|TRI_SACS2|TRICORN protease homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SIKLVSIDSK 10
SIKL ID K
Sbjct: 488 SIKLAHIDGK 497


>sp|RADA_METS5|DNA repair and recombination protein|Metallosphaera sedula (strain ATCC

Query: 1 SIKLVSIDS 9
SIKLV +DS
Sbjct: 203 SIKLVVVDS 211


>sp|RADA_METVO|DNA repair and recombination protein|Methanococcus voltae

Query: 1 SIKLVSIDS 9
+IKLV IDS
Sbjct: 204 NIKLVVIDS 212


>sp|RADA_METMI|DNA repair and recombination protein|Methanococcus maripaludis

Query: 1 SIKLVSIDS 9
+IKLV IDS
Sbjct: 204 NIKLVIIDS 212


>sp|RADA_METM7|DNA repair and recombination protein|Methanococcus maripaludis (strain

Query: 1 SIKLVSIDS 9
+IKLV IDS
Sbjct: 204 NIKLVIIDS 212


>sp|RADA_METM5|DNA repair and recombination protein|Methanococcus maripaludis (strain

Query: 1 SIKLVSIDS 9
+IKLV IDS
Sbjct: 204 NIKLVIIDS 212


>sp|RADA_METMP|DNA repair and recombination protein|Methanococcus maripaludis (strain

Query: 1 SIKLVSIDS 9
+IKLV IDS
Sbjct: 204 NIKLVIIDS 212




20|Sequence|96|105|SIDSKAIVDG

>sp|HDRA_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina mazei (strain

Query: 2 IDSKAIVD 9
+D KA+VD
Sbjct: 598 VDKKAVVD 605


>sp|RS9_SULTO|SMALL ribosomal subunit protein uS9|Sulfurisphaera tokodaii (strain DSM

Query: 1 SIDSKAIVDG 10
SID+K V+G
Sbjct: 63 SIDAKIYVEG 72


>sp|G6PI_METMP|PROBABLE glucose-6-phosphate isomerase|Methanococcus maripaludis (strain DSM

Query: 1 SIDSKAIVDG 10
S+D K ++DG
Sbjct: 213 SVDIKKLIDG 222


>sp|FTTA_CENSY|TRANSCRIPTION termination factor FttA|Cenarchaeum symbiosum (strain A)

Query: 1 SIDSKAIVD 9
++DSK +VD
Sbjct: 208 TLDSKVLVD 216




21|Sequence|101|110|AIVDGNLKLI

>sp|PUR2_METTH|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 AIVDGNLK 8
IVDGNLK
Sbjct: 315 GIVDGNLK 322


>sp|PUR2_THEKO|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 IVDGNLK 8
IVDGNLK
Sbjct: 313 IVDGNLK 319


>sp|PUR2_METS3|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 AIVDGNL 7
AIVDGNL
Sbjct: 315 AIVDGNL 321


>sp|PUR2_THEGJ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 AIVDGNLK 8
IVDGNL+
Sbjct: 313 GIVDGNLQ 320


>sp|PUR2_PYRFU|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IVDGNLK 8
I+DGNL+
Sbjct: 315 IIDGNLR 321


>sp|NADE_METBU|NH(3)-DEPENDENT NAD(+) synthetase|Methanococcoides burtonii (strain DSM 6242

Query: 1 AIVDGNLK 8
A VDGNLK
Sbjct: 105 AHVDGNLK 112


>sp|GLKA_PYRHO|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus horikoshii (strain ATCC

Query: 1 AIVDGNLKLI 10
A+++G LKLI
Sbjct: 325 AVIEGLLKLI 334


>sp|RS3A_HALLT|SMALL ribosomal subunit protein eS1|Halorubrum lacusprofundi (strain ATCC

Query: 1 AIVDGNL 7
AIV+GNL
Sbjct: 157 AIVEGNL 163


>sp|MTAD1_ARCFU|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AIVDGNLKL 9
IV+GNLK+
Sbjct: 14 GIVEGNLKV 22


>sp|CAS5_METJA|CRISPR-ASSOCIATED protein Cas5|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IVDGNLKLI 10
I DGN K+I
Sbjct: 227 IFDGNYKII 235


>sp|RS13_METJA|SMALL ribosomal subunit protein uS13|Methanocaldococcus jannaschii

Query: 3 VDGNLKLI 10
+DGN KLI
Sbjct: 17 LDGNKKLI 24


>sp|NADE_METJA|NH(3)-DEPENDENT NAD(+) synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IVDGNLK 8
I DGNLK
Sbjct: 111 IADGNLK 117


>sp|TRPD_METTM|ANTHRANILATE phosphoribosyltransferase|Methanothermobacter marburgensis (strain

Query: 1 AIVDGNLKL 9
+ VDGNL++
Sbjct: 274 STVDGNLRM 282


>sp|PTH_METBU|PEPTIDYL-TRNA hydrolase|Methanococcoides burtonii (strain DSM 6242

Query: 3 VDGNLKLI 10
V GNLKL+
Sbjct: 108 VTGNLKLV 115


>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC

Query: 1 AIVDGNLKL 9
A++DG LK+
Sbjct: 847 AVLDGELKI 855


>sp|PTH_THESM|PEPTIDYL-TRNA hydrolase|Thermococcus sibiricus (strain DSM 12597

Query: 3 VDGNLKLI 10
+ GNLKL+
Sbjct: 111 ITGNLKLV 118


>sp|RL14E_METVS|LARGE ribosomal subunit protein eL14|Methanococcus vannielii (strain

Query: 2 IVDGNLK 8
+VDGN+K
Sbjct: 34 VVDGNVK 40


>sp|HEM1_METTH|GLUTAMYL-TRNA reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 IVDGNLKLI 10
IV+G LKL+
Sbjct: 305 IVEGELKLL 313


>sp|PTH_PYRHO|PEPTIDYL-TRNA hydrolase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 VDGNLKLI 10
V GNLKL+
Sbjct: 114 VTGNLKLL 121




22|Sequence|106|115|NLKLILGLVW

>sp|ILVC_UNCAG|KETOL-ACID reductoisomerase (NAD(+))|Uncultured archaeon GZfos26G2

Query: 2 LKLILGLVW 10
+KLI+ LVW
Sbjct: 236 MKLIVDLVW 244


>sp|PDXS_AERPE|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Aeropyrum pernix (strain ATCC

Query: 1 NLKLILGLVW 10
++KLI+G +W
Sbjct: 202 HMKLIMGDIW 211


>sp|RS15_METTP|SMALL ribosomal subunit protein uS15|Methanothrix thermoacetophila

Query: 1 NLKLILG 7
NLKLILG
Sbjct: 62 NLKLILG 68


>sp|Y547_METJA|UNCHARACTERIZED ATP-binding protein MJ0547|Methanocaldococcus jannaschii (strain

Query: 1 NLKLILGL 8
NL+LI+GL
Sbjct: 49 NLELIMGL 56


>sp|ILVC_PYRCJ|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum calidifontis (strain DSM

Query: 3 KLILGLVW 10
KLI+ L+W
Sbjct: 233 KLIMDLIW 240


>sp|ILVC_PYRNV|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum neutrophilum (strain DSM

Query: 3 KLILGLVW 10
KLI+ L+W
Sbjct: 233 KLIMDLIW 240


>sp|ILVC_PYRAR|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum arsenaticum (strain DSM

Query: 3 KLILGLVW 10
KLI+ L+W
Sbjct: 233 KLIMDLIW 240


>sp|ILVC_PYRAE|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum aerophilum (strain ATCC

Query: 3 KLILGLVW 10
KLI+ L+W
Sbjct: 233 KLIMDLIW 240


>sp|ILVC_PYRIL|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum islandicum (strain DSM 4184

Query: 3 KLILGLVW 10
KLI+ L+W
Sbjct: 233 KLIMDLIW 240


>sp|ILVC_CALMQ|KETOL-ACID reductoisomerase (NADP(+))|Caldivirga maquilingensis (strain ATCC

Query: 3 KLILGLVW 10
KLI+ L+W
Sbjct: 232 KLIMDLIW 239




23|Sequence|111|120|LGLVWTLILH

>sp|CAPPA_PYRIL|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 LGLVWTLILH 10
LGLV+ ++LH
Sbjct: 124 LGLVYRMLLH 133


>sp|HTR7_HALSA|TRANSDUCER protein Htr7|Halobacterium salinarum (strain ATCC 700922

Query: 1 LGLVWTLIL 9
LG+ WT+ L
Sbjct: 54 LGVTWTVSL 62


>sp|HTR7_HALS3|TRANSDUCER protein Htr7|Halobacterium salinarum (strain ATCC 29341

Query: 1 LGLVWTLIL 9
LG+ WT+ L
Sbjct: 54 LGVTWTVSL 62


>sp|SYG_METTH|GLYCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 LVWTLILH 10
+++TL+LH
Sbjct: 444 IIYTLLLH 451


>sp|CYB_SULAC|CYTOCHROME b|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LGLVWTL 7
LGL+WTL
Sbjct: 521 LGLMWTL 527


>sp|MTRA1_METRM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 1|Methanobrevibacter ruminantium

Query: 1 LGLVWTLIL 9
+GL++TL++
Sbjct: 225 IGLIFTLVI 233




24|Sequence|116|125|TLILHYSISM

***** No hits found ******


25|Sequence|121|130|YSISMPVWED

>sp|MT51_METJA|PUTATIVE type II methyltransferase M.MJ0563P|Methanocaldococcus jannaschii

Query: 1 YSISMPVWED 10
Y+I PVW D
Sbjct: 40 YNIKAPVWMD 49


>sp|NIFE_METBA|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanosarcina

Query: 2 SISMPVWE 9
SIS PVW+
Sbjct: 450 SISSPVWK 457


>sp|MDH_METKA|MALATE dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 5 MPVWED 10
MP WED
Sbjct: 199 MPGWED 204


>sp|KGSDH_SACS2|2,5-DIOXOPENTANOATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YSISMPVWE 9
+ +S+PVW+
Sbjct: 150 FPLSIPVWK 158


>sp|G3P_METTH|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 5 MPVWED 10
+PVWE+
Sbjct: 279 IPVWEE 284


>sp|GLKA_PYRFU|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 MPVWED 10
MP WE+
Sbjct: 1 MPTWEE 6


>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 YSISMPVWE 9
+ I +PVWE
Sbjct: 476 WGIPLPVWE 484


>sp|SYI_THEKO|ISOLEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 YSISMPVWE 9
+ I +P+WE
Sbjct: 467 WGIPLPIWE 475


>sp|CAS8B_HALVD|CRISPR-ASSOCIATED protein Cas8b|Haloferax volcanii (strain ATCC 29605

Query: 1 YSISMPVWED 10
Y+I++P+ +D
Sbjct: 380 YTITLPIGDD 389


>sp|SYV_PICTO|VALINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 YSISMPVW 8
Y I PVW
Sbjct: 389 YGIPFPVW 396




26|Sequence|126|135|PVWEDEGDDD

>sp|Y515_METJA|UNCHARACTERIZED protein MJ0515|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PVWEDEGDD 9
PVW +EGD+
Sbjct: 243 PVWREEGDN 251


>sp|IORA_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorA|Archaeoglobus fulgidus (strain ATCC

Query: 3 WEDEGDDD 10
W DEGD D
Sbjct: 241 WVDEGDGD 248


>sp|TRUB_AERPE|PROBABLE tRNA pseudouridine synthase B|Aeropyrum pernix (strain ATCC 700893

Query: 3 WEDEGDDD 10
W +EG DD
Sbjct: 238 WREEGKDD 245


>sp|HIS8_HALVD|HISTIDINOL-PHOSPHATE aminotransferase|Haloferax volcanii (strain ATCC 29605

Query: 1 PVWEDEGD 8
P WE EG+
Sbjct: 292 PTWESEGN 299


>sp|SURE_METJA|5'-NUCLEOTIDASE SurE|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PVWEDEGDDD 10
P++E+E D D
Sbjct: 219 PIFEEEEDTD 228


>sp|APE1_SULTO|PROBABLE aminopeptidase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PVWEDEG 7
P WE EG
Sbjct: 309 PQWESEG 315


>sp|LYSJ_PYRHO|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 2 VWEDEG 7
VW+D+G
Sbjct: 18 VWDDQG 23


>sp|HMGCS_METAR|HYDROXYMETHYLGLUTARYL-COA synthase|Methanocella arvoryzae (strain DSM 22066

Query: 2 VWEDEGDD 9
VW D+ DD
Sbjct: 25 VWGDDADD 32


>sp|MCH_METM7|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain C7 /

Query: 2 VWEDEGDD 9
V DEGDD
Sbjct: 242 VKSDEGDD 249


>sp|TRUB_METBF|PROBABLE tRNA pseudouridine synthase B|Methanosarcina barkeri (strain Fusaro

Query: 2 VWEDEGDD 9
+W+++GD+
Sbjct: 221 LWKEDGDE 228


>sp|MCH_METMP|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain DSM 14266

Query: 2 VWEDEGDD 9
V DEGDD
Sbjct: 242 VKSDEGDD 249


>sp|MCH_METM5|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain C5 /

Query: 2 VWEDEGDD 9
V DEGDD
Sbjct: 242 VKSDEGDD 249


>sp|GYAR_THEON|GLYOXYLATE reductase|Thermococcus onnurineus (strain NA1)

Query: 2 VWEDE 6
VWEDE
Sbjct: 27 VWEDE 31


>sp|TREH1_SULAC|TREHALASE 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 VWEDEGD 8
+WED GD
Sbjct: 372 MWEDRGD 378


>sp|RGYR_METJA|REVERSE gyrase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VWEDE 6
+WEDE
Sbjct: 807 IWEDE 811


>sp|NADE_AERPE|NH(3)-DEPENDENT NAD(+) synthetase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PVWEDEGDD 9
P++EDE D
Sbjct: 113 PIFEDEEKD 121


>sp|MCH_METHJ|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 WEDEGDD 9
+EDE DD
Sbjct: 128 YEDESDD 134


>sp|LYSJ_PYRAE|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 2 VWEDEG 7
VW+D+G
Sbjct: 23 VWDDKG 28


>sp|ARGD_METKA|ACETYLORNITHINE aminotransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 VWEDEGDD 9
VW+DEG++
Sbjct: 30 VWDDEGNE 37


>sp|TRUB_METMA|PROBABLE tRNA pseudouridine synthase B|Methanosarcina mazei (strain ATCC

Query: 3 WEDEGDD 9
W+++GD+
Sbjct: 222 WKEDGDE 228


>sp|TRUB_METAC|PROBABLE tRNA pseudouridine synthase B|Methanosarcina acetivorans (strain

Query: 3 WEDEGDD 9
W+++GD+
Sbjct: 222 WKEDGDE 228


>sp|GYAR_PYRAB|GLYOXYLATE reductase|Pyrococcus abyssi (strain GE5 /

Query: 2 VWEDE 6
VWEDE
Sbjct: 28 VWEDE 32


>sp|THI4_META3|THIAMINE thiazole synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 VWEDEGDD 9
+W DEG++
Sbjct: 202 LWADEGEN 209


>sp|HELS_SACS9|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain 98/2)

Query: 3 WEDEGDDD 10
W DE D+D
Sbjct: 591 WMDEVDED 598




27|Sequence|131|140|EGDDDAKKQT

>sp|RFCL_SACS2|REPLICATION factor C large subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 EGDDDAKKQ 9
E DDAKKQ
Sbjct: 17 ENQDDAKKQ 25


>sp|TSR3_HALSA|16S rRNA aminocarboxypropyltransferase|Halobacterium salinarum

Query: 1 EGDDDAKKQT 10
EGDDD +K T
Sbjct: 8 EGDDDPEKCT 17


>sp|TSR3_HALS3|16S rRNA aminocarboxypropyltransferase|Halobacterium salinarum

Query: 1 EGDDDAKKQT 10
EGDDD +K T
Sbjct: 8 EGDDDPEKCT 17




28|Sequence|136|145|AKKQTPKQRL

>sp|Y3936_METAC|UPF0060 membrane protein MA_3936|Methanosarcina acetivorans (strain ATCC

Query: 4 QTPKQRL 10
QTP+QR+
Sbjct: 122 QTPRQRI 128


>sp|NUCS_SULAC|ENDONUCLEASE NucS|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 AKKQTPKQRL 10
A+++ PK+RL
Sbjct: 91 AERKRPKERL 100




29|Sequence|141|150|PKQRLLGWIQ

>sp|CDC6C_HALMA|ORC1-TYPE DNA replication protein 3|Haloarcula marismortui (strain ATCC

Query: 1 PKQRLLGW 8
P+ R+LGW
Sbjct: 5 PEDRMLGW 12


>sp|GPMA_METMA|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PKQRLLGWI 9
P +RL GWI
Sbjct: 19 PGERLSGWI 27


>sp|Y1303_METHJ|UPF0182 protein Mhun_1303|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 KQRLLGWI 9
KQ L+GW+
Sbjct: 720 KQNLIGWM 727


>sp|Y1004_METJA|UNCHARACTERIZED protein MJ1004|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KQRLLGWI 9
+ RL+GW+
Sbjct: 41 EDRLVGWV 48


>sp|SYM_THEON|METHIONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 KQRLLGWIQ 10
K +LGWI+
Sbjct: 214 KNTVLGWIE 222


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KQRLLGWIQ 10
K RLL WI+
Sbjct: 381 KIRLLNWIE 389


>sp|SYV_METMP|VALINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 KQRLLGWIQ 10
K RL+ WI+
Sbjct: 382 KARLMKWIE 390


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 2 KQRLLGWI 9
K+ L+GW+
Sbjct: 1163 KETLIGWL 1170


>sp|SYM_PYRFU|METHIONINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KQRLLGWIQ 10
K +LGWI+
Sbjct: 213 KNMVLGWIE 221


>sp|RS4E_HYPBU|SMALL ribosomal subunit protein eS4|Hyperthermus butylicus (strain DSM

Query: 1 PKQRLLGW 8
P+Q+LLG+
Sbjct: 175 PEQQLLGY 182




30|Sequence|146|155|LGWIQNKIPY

>sp|RFCL_NATPD|REPLICATION factor C large subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LGWIQNKIP 9
L WI++K+P
Sbjct: 254 LQWIEDKVP 262


>sp|RFCL_HALWD|REPLICATION factor C large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LGWIQNKIP 9
L W+++K+P
Sbjct: 263 LKWVEDKVP 271


>sp|Y321_METJA|UNCHARACTERIZED protein MJ0321|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LGWIQNK 7
LGWI NK
Sbjct: 46 LGWINNK 52


>sp|FLAD_METJA|PUTATIVE flagella-related protein D|Methanocaldococcus jannaschii (strain

Query: 1 LGWIQNKI 8
+GWI N++
Sbjct: 264 IGWISNRV 271


>sp|RFCL_THEKO|REPLICATION factor C large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 LGWIQNKIPY 10
L WI +PY
Sbjct: 256 LQWIDENVPY 265


>sp|SYA_THEKO|ALANINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GWIQNKIP 9
GWI+ K P
Sbjct: 14 GWIRKKCP 21


>sp|FLUC3_METBF|FLUORIDE-SPECIFIC ion channel FluC 3|Methanosarcina barkeri (strain Fusaro /

Query: 2 GWIQN 6
GWIQN
Sbjct: 23 GWIQN 27


>sp|Y942_METJA|PROBABLE ATP-dependent helicase MJ0942|Methanocaldococcus jannaschii

Query: 2 GWIQNKIPY 10
G+I+ K PY
Sbjct: 5 GYIKEKFPY 13


>sp|SYM_METMJ|METHIONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GWIQNKIPY 10
G+IQN P+
Sbjct: 448 GYIQNNAPW 456


>sp|AGLB_HALVD|DOLICHYL-MONOPHOSPHOOLIGOSACCHARIDE--PROTEIN glycotransferase AglB|Haloferax volcanii (strain ATCC 29605

Query: 1 LGWIQNKIP 9
L W+QN P
Sbjct: 594 LTWMQNNTP 602


>sp|FLAJ_METVO|FLAGELLA accessory protein J|Methanococcus voltae

Query: 4 IQNKIPY 10
I+NK+PY
Sbjct: 242 IKNKLPY 248


>sp|SYL1_SULAC|LEUCINE--TRNA ligase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 IQNKIPY 10
+QN IPY
Sbjct: 588 VQNHIPY 594


>sp|CARA_SULTO|CARBAMOYL phosphate synthase small chain|Sulfurisphaera tokodaii (strain DSM

Query: 2 GWIQNKIP 9
GWI K+P
Sbjct: 333 GWIHEKLP 340


>sp|WECC_METM5|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 1 LGWIQNKIPY 10
+G +QN IP+
Sbjct: 109 MGAVQNIIPF 118


>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LGWIQNKI 8
+GW++N++
Sbjct: 218 IGWVENEL 225


>sp|RFCL_HYPBU|REPLICATION factor C large subunit|Hyperthermus butylicus (strain DSM 5456

Query: 3 WIQNKIP 9
W+Q +IP
Sbjct: 36 WLQGRIP 42


>sp|GLYA_NITMS|SERINE hydroxymethyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 WIQNKIP 9
W +N IP
Sbjct: 23 WFENSIP 29


>sp|GLYA_CENSY|SERINE hydroxymethyltransferase|Cenarchaeum symbiosum (strain A)

Query: 3 WIQNKIP 9
W +N IP
Sbjct: 24 WFENSIP 30


>sp|FLUC1_METAC|FLUORIDE-SPECIFIC ion channel FluC 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GWIQN 6
GW+QN
Sbjct: 23 GWVQN 27


>sp|AROC_METS5|CHORISMATE synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 LGWIQNK 7
LGW +NK
Sbjct: 273 LGWRENK 279


>sp|CAS2B_ARCFU|CRISPR-ASSOCIATED endoribonuclease Cas2 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LGWIQNKI 8
L W+QN +
Sbjct: 29 LNWVQNSL 36


>sp|SYL1_SULTO|LEUCINE--TRNA ligase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 IQNKIPY 10
IQN +PY
Sbjct: 589 IQNHLPY 595


>sp|NOB1_METJA|ENDORIBONUCLEASE Nob1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WIQNKIPY 10
WI NK PY
Sbjct: 13 WIINKSPY 20


>sp|CAS2_PYRFU|CRISPR-ASSOCIATED endoribonuclease Cas2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LGWIQNKI 8
L W+QN +
Sbjct: 25 LNWVQNSV 32


>sp|CAS2_METTH|CRISPR-ASSOCIATED endoribonuclease Cas2|Methanothermobacter thermautotrophicus

Query: 1 LGWIQNKI 8
L W+QN +
Sbjct: 29 LHWVQNSV 36


>sp|PGP_STAMF|PHOSPHOGLYCOLATE phosphatase|Staphylothermus marinus (strain ATCC 43588

Query: 3 WIQNKIPY 10
+++NK PY
Sbjct: 137 YVENKYPY 144


>sp|DHE_HALSI|GLUTAMATE dehydrogenase A2|Halobacterium salinarum (Halobacterium halobium)

Query: 1 LGWIQNKIPY 10
L W+QN Y
Sbjct: 350 LEWVQNSQQY 359


>sp|DHE_HALSA|GLUTAMATE dehydrogenase A2|Halobacterium salinarum (strain ATCC 700922

Query: 1 LGWIQNKIPY 10
L W+QN Y
Sbjct: 350 LEWVQNSQQY 359


>sp|CAS2_THEKO|CRISPR-ASSOCIATED endoribonuclease Cas2|Thermococcus kodakarensis (strain ATCC

Query: 1 LGWIQNKI 8
L W+QN +
Sbjct: 25 LHWVQNSV 32


>sp|CAS2_METAC|CRISPR-ASSOCIATED endoribonuclease Cas2|Methanosarcina acetivorans (strain ATCC

Query: 1 LGWIQNKI 8
+ W+QN +
Sbjct: 25 MNWVQNSV 32


>sp|RLMH_METTP|PUTATIVE ribosomal RNA large subunit|Methanothrix thermoacetophila (strain

Query: 3 WIQNKI 8
W+QN+I
Sbjct: 77 WLQNRI 82


>sp|TRUA_PYRAR|TRNA pseudouridine synthase A|Pyrobaculum arsenaticum (strain DSM

Query: 1 LGWIQNKIP 9
LG++ +K+P
Sbjct: 61 LGYVNSKLP 69


>sp|IXTPA_PYRHO|DITP/XTP pyrophosphatase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LGWIQNKIP 9
+ W++ K+P
Sbjct: 50 ISWLKGKVP 58




31|Sequence|151|160|NKIPYLPITN

>sp|EF1A_CALMQ|ELONGATION factor 1-alpha|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 NKIPYLPIT 9
NK+P++P++
Sbjct: 193 NKVPFIPVS 201


>sp|ENDA_ARCFU|TRNA-SPLICING endonuclease|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KIPYLPIT 9
K PYLPI+
Sbjct: 90 KKPYLPIS 97


>sp|EF1A_AERPE|ELONGATION factor 1-alpha|Aeropyrum pernix (strain ATCC 700893

Query: 1 NKIPYLPIT 9
+KIP++P++
Sbjct: 185 DKIPFIPVS 193


>sp|EF1A_DESMO|ELONGATION factor 1-alpha|Desulfurococcus mucosus (Desulfurococcus mobilis)

Query: 1 NKIPYLPIT 9
+KIP++PI+
Sbjct: 187 SKIPFIPIS 195


>sp|TRIN_SULTO|PUTATIVE Tricorn-like protease N-terminal subunit|Sulfurisphaera tokodaii

Query: 1 NKIPYLPITN 10
KIP+ PI+N
Sbjct: 146 EKIPFGPISN 155


>sp|PYRG_PICTO|CTP synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 NKIPYLPI 8
N+IPYL I
Sbjct: 362 NRIPYLGI 369


>sp|CARB_THEVO|CARBAMOYL phosphate synthase large chain|Thermoplasma volcanium (strain ATCC

Query: 2 KIPYLPI 8
KIP++P+
Sbjct: 160 KIPFMPV 166


>sp|EF1A_METKA|ELONGATION factor 1-alpha|Methanopyrus kandleri (strain AV19 /

Query: 1 NKIPYLPIT 9
++IP++PI+
Sbjct: 167 DEIPFIPIS 175


>sp|DNAK_THEAC|CHAPERONE protein DnaK|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 IPYLPITN 10
+PY+ +TN
Sbjct: 259 LPYITVTN 266


>sp|EF1A_STAMF|ELONGATION factor 1-alpha|Staphylothermus marinus (strain ATCC 43588

Query: 1 NKIPYLPIT 9
+K+P++P++
Sbjct: 186 SKVPFIPVS 194


>sp|IF6_METHJ|TRANSLATION initiation factor 6|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 KIPYLPIT 9
K+P +P+T
Sbjct: 128 KVPVIPLT 135




32|Sequence|156|165|LPITNFNQNW

>sp|SYK_ARCFU|LYSINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 ITNFNQNW 10
+T+F++NW
Sbjct: 180 VTSFDENW 187


>sp|SYFB_METM7|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C7 /

Query: 2 PITNFNQ 8
P+TNFN+
Sbjct: 479 PLTNFNE 485


>sp|SYFB_METM5|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C5 /

Query: 2 PITNFNQ 8
P+TNFN+
Sbjct: 479 PLTNFNE 485


>sp|SYFB_METM6|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C6 /

Query: 2 PITNFNQ 8
P+TNFN+
Sbjct: 479 PLTNFNE 485


>sp|SYFB_METMP|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain DSM 14266

Query: 2 PITNFNQ 8
P+TNFN+
Sbjct: 479 PLTNFNE 485


>sp|T1R2_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 3 ITNFNQNW 10
I N+N+NW
Sbjct: 577 IKNYNENW 584


>sp|SYFB_METVS|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus vannielii (strain ATCC 35089

Query: 2 PITNFNQ 8
P+TNFN+
Sbjct: 479 PLTNFNE 485


>sp|RL11_SULAC|LARGE ribosomal subunit protein uL11|Sulfolobus acidocaldarius (strain

Query: 3 ITNFNQNW 10
+TN+ Q W
Sbjct: 158 LTNYEQKW 165


>sp|Y601_METMP|PROBABLE minor pilin MMP0601|Methanococcus maripaludis (strain DSM 14266

Query: 1 LPITNFNQNW 10
LPI QNW
Sbjct: 119 LPIKEEKQNW 128


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 2 PITNFNQNW 10
P+T+F +W
Sbjct: 740 PMTHFKPSW 748


>sp|CMR7A_SACS2|CRISPR system CMR subunit Cmr7|Saccharolobus solfataricus (strain ATCC

Query: 1 LPITNFN 7
LPI NFN
Sbjct: 121 LPIKNFN 127


>sp|FAEHP_METJA|BIFUNCTIONAL enzyme Fae/Hps|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PITNFNQ 8
PITN N+
Sbjct: 105 PITNLNK 111


>sp|Y1008_CALMQ|UPF0179 protein Cmaq_1008|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 ITNFNQNW 10
IT+F+++W
Sbjct: 93 ITSFDKSW 100


>sp|TRM56_PYRHO|TRNA (cytidine(56)-2'-O)-methyltransferase|Pyrococcus horikoshii

Query: 6 FNQNW 10
FN+NW
Sbjct: 62 FNRNW 66


>sp|Y1317_ARCFU|UNCHARACTERIZED protein AF_1317|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LPITNFN 7
LPI NFN
Sbjct: 118 LPILNFN 124


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 1 LPITNFNQN 9
+PIT+F N
Sbjct: 711 IPITHFKYN 719




33|Sequence|161|170|FNQNWQDGKA

>sp|Y3407_METJA|UNCHARACTERIZED protein MJECS07|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NQNWQDGK 9
N NW+DGK
Sbjct: 345 NSNWEDGK 352


>sp|NADB_SACS2|L-ASPARTATE oxidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 NQNWQDGK 9
N++W+DGK
Sbjct: 456 NKSWEDGK 463


>sp|PYRH_SULAC|URIDYLATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FNQNWQDGK 9
FN+ W GK
Sbjct: 98 FNERWASGK 106


>sp|RBL_METJA|RIBULOSE bisphosphate carboxylase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FNQNWQDGK 9
FNQ+W D K
Sbjct: 338 FNQDWFDIK 346


>sp|FLPA_METHJ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanospirillum hungatei JF-1

Query: 5 WQDGK 9
WQDGK
Sbjct: 3 WQDGK 7


>sp|RIBL_METLZ|FAD synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 FNQNWQDGK 9
FNQ W + K
Sbjct: 91 FNQKWSEEK 99


>sp|CDPAS_PYRFU|CDP-ARCHAEOL synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FNQNWQDGK 9
F + W+DG+
Sbjct: 32 FGKTWRDGR 40


>sp|AGLB_METJA|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FNQNWQDG 8
FN W++G
Sbjct: 605 FNNGWKEG 612


>sp|PYRC_PYRHO|DIHYDROOROTASE horikoshii (strain ATCC 700860

Query: 2 NQNWQDGK 9
N+ W++GK
Sbjct: 331 NKGWEEGK 338


>sp|DTDA_KORCO|D-AMINOACYL-TRNA deacylase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 QNWQDGK 9
++W+DGK
Sbjct: 167 ESWKDGK 173


>sp|CDPAS_PYRHO|CDP-ARCHAEOL synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FNQNWQDGK 9
F + W+DG+
Sbjct: 34 FGKKWRDGR 42


>sp|Y952_PYRAE|UPF0215 protein PAE0952|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 NWQDGKA 10
NW DG+A
Sbjct: 72 NWVDGEA 78


>sp|RIBL_METAR|FAD synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 FNQNWQDGK 9
FNQ+W + +
Sbjct: 92 FNQHWNENE 100


>sp|CMO_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase cofactor-modifying|Pyrococcus

Query: 1 FNQNWQD 7
F Q+W+D
Sbjct: 20 FKQHWED 26


>sp|CDPAS_METHJ|CDP-ARCHAEOL synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 QNWQDGK 9
+NW DG+
Sbjct: 24 RNWTDGR 30


>sp|CDPAS_PYRAB|CDP-ARCHAEOL synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 FNQNWQDGK 9
F + W+DG+
Sbjct: 32 FGKKWRDGR 40


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 NWQDGK 9
NW+DGK
Sbjct: 1704 NWEDGK 1709


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NQNWQD 7
N+NW+D
Sbjct: 1439 NENWRD 1444


>sp|Y148_PYRAR|UPF0215 protein Pars_0148|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 NWQDGKA 10
NW DG+A
Sbjct: 72 NWIDGEA 78


>sp|RIBL_METPS|FAD synthase|Methanocella paludicola (strain DSM 17711

Query: 1 FNQNWQD 7
FNQ+W +
Sbjct: 91 FNQHWDE 97


>sp|Y119_PYRCJ|UPF0215 protein Pcal_0119|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 NWQDGKA 10
NW DG+A
Sbjct: 72 NWIDGEA 78


>sp|ACDB2_METTE|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 4 NWQDGKA 10
NW DG+A
Sbjct: 215 NWFDGRA 221


>sp|DLDH3_HALMA|DIHYDROLIPOYL dehydrogenase 3|Haloarcula marismortui (strain ATCC 43049

Query: 4 NWQDG 8
NW+DG
Sbjct: 89 NWKDG 93


>sp|PYRH_SACS2|URIDYLATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FNQNWQDGK 9
F Q+W GK
Sbjct: 99 FIQDWSHGK 107


>sp|PYRH_SACI7|URIDYLATE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 FNQNWQDGK 9
F Q+W GK
Sbjct: 98 FIQDWSHGK 106


>sp|PYRH_SACI6|URIDYLATE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 FNQNWQDGK 9
F Q+W GK
Sbjct: 98 FIQDWSHGK 106


>sp|PYRH_SACI4|URIDYLATE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 FNQNWQDGK 9
F Q+W GK
Sbjct: 98 FIQDWSHGK 106


>sp|PYRH_SACI3|URIDYLATE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 FNQNWQDGK 9
F Q+W GK
Sbjct: 98 FIQDWSHGK 106


>sp|PYRH_SACI2|URIDYLATE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 FNQNWQDGK 9
F Q+W GK
Sbjct: 98 FIQDWSHGK 106


>sp|PYRH_SACI1|URIDYLATE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 FNQNWQDGK 9
F Q+W GK
Sbjct: 98 FIQDWSHGK 106


>sp|CBID_METM6|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanococcus maripaludis (strain C6 /

Query: 3 QNWQDG 8
+NW DG
Sbjct: 91 ENWDDG 96


>sp|DABA_NATPD|PROBABLE inorganic carbon transporter subunit|Natronomonas pharaonis

Query: 1 FNQNWQDGK 9
F + W+DG+
Sbjct: 68 FRRAWEDGR 76


>sp|ACDB1_METTE|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 4 NWQDGKA 10
NW DG+A
Sbjct: 215 NWFDGRA 221


>sp|ACDB2_METMA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina mazei

Query: 4 NWQDGKA 10
NW DG+A
Sbjct: 216 NWFDGRA 222


>sp|ACDB1_METMA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina mazei

Query: 4 NWQDGKA 10
NW DG+A
Sbjct: 215 NWFDGRA 221


>sp|ACDB1_METAC|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 4 NWQDGKA 10
NW DG+A
Sbjct: 215 NWFDGRA 221


>sp|ACDB2_METAC|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 4 NWQDGKA 10
NW DG+A
Sbjct: 215 NWFDGRA 221


>sp|Y2291_ARCFU|UNCHARACTERIZED protein AF_2291|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FNQNWQDGKA 10
F NW D K
Sbjct: 121 FRSNWMDSKG 130


>sp|TRM56_PYRHO|TRNA (cytidine(56)-2'-O)-methyltransferase|Pyrococcus horikoshii

Query: 1 FNQNWQ 6
FN+NW+
Sbjct: 62 FNRNWR 67


>sp|HELS_PYRHO|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 WQDGK 9
W+DGK
Sbjct: 215 WEDGK 219


>sp|RL15E_METST|LARGE ribosomal subunit protein eL15|Methanosphaera stadtmanae (strain

Query: 5 WQDGKA 10
W+DGKA
Sbjct: 123 WEDGKA 128




34|Sequence|166|175|QDGKALGALV

>sp|SPSS_METMJ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 DGKALGA 8
DGKALGA
Sbjct: 201 DGKALGA 207


>sp|AROC_META3|CHORISMATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 GKALGALV 10
GKALGA+V
Sbjct: 18 GKALGAVV 25


>sp|AROC_METVS|CHORISMATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 3 GKALGALV 10
GKALGA++
Sbjct: 19 GKALGAVI 26


>sp|AROC_METMP|CHORISMATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 GKALGALV 10
GKALGA++
Sbjct: 18 GKALGAVI 25


>sp|AROC_METM7|CHORISMATE synthase|Methanococcus maripaludis (strain C7 /

Query: 3 GKALGALV 10
GKALGA++
Sbjct: 18 GKALGAVI 25


>sp|AROC_METM5|CHORISMATE synthase|Methanococcus maripaludis (strain C5 /

Query: 3 GKALGALV 10
GKALGA++
Sbjct: 18 GKALGAVI 25


>sp|RS6E_METS3|SMALL ribosomal subunit protein eS6|Methanobrevibacter smithii (strain

Query: 1 QDGKALGALV 10
+DGKAL LV
Sbjct: 19 EDGKALNGLV 28


>sp|RL1_METBU|LARGE ribosomal subunit protein uL1|Methanococcoides burtonii (strain DSM

Query: 1 QDGKALGALV 10
Q GKALGA++
Sbjct: 115 QIGKALGAIL 124


>sp|SPSS2_METHJ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 DGKALGA 8
DGKA+GA
Sbjct: 262 DGKAIGA 268


>sp|Y1571_METJA|UNCHARACTERIZED protein MJ1571|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QDGKALGAL 9
+ GKA+GAL
Sbjct: 226 EAGKAIGAL 234


>sp|NUCS_SULTO|ENDONUCLEASE NucS|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GKALGALV 10
GKA GALV
Sbjct: 200 GKARGALV 207


>sp|METK_THEAC|S-ADENOSYLMETHIONINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 QDGKALGAL 9
+DGKA+G L
Sbjct: 258 EDGKAVGYL 266


>sp|ILVD_SACS2|DIHYDROXY-ACID dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 QDGKALGALV 10
+ GKALG+L+
Sbjct: 234 ETGKALGSLI 243


>sp|ILVD_SACI7|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 QDGKALGALV 10
+ GKALG+L+
Sbjct: 234 ETGKALGSLI 243


>sp|ILVD_SACI6|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 QDGKALGALV 10
+ GKALG+L+
Sbjct: 234 ETGKALGSLI 243


>sp|ILVD_SACI4|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 QDGKALGALV 10
+ GKALG+L+
Sbjct: 234 ETGKALGSLI 243


>sp|ILVD_SACI3|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 QDGKALGALV 10
+ GKALG+L+
Sbjct: 234 ETGKALGSLI 243


>sp|ILVD_SACI1|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 QDGKALGALV 10
+ GKALG+L+
Sbjct: 234 ETGKALGSLI 243


>sp|AROC_METST|CHORISMATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 GKALGALV 10
GKALGA +
Sbjct: 20 GKALGATI 27


>sp|AROC_METJA|CHORISMATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GKALGALV 10
GKA+GA+V
Sbjct: 22 GKAVGAVV 29


>sp|ILVD_SACI2|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 QDGKALGALV 10
+ GKALG+L+
Sbjct: 234 ETGKALGSLI 243


>sp|Y727_METJA|UNCHARACTERIZED protein MJ0727|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QDGKALGALV 10
+DGKA+G V
Sbjct: 233 KDGKAIGEAV 242


>sp|CSA1_THETK|CRISPR-ASSOCIATED exonuclease Csa1|Thermoproteus tenax (strain ATCC 35583

Query: 2 DGKALGALV 10
DG ALGA+V
Sbjct: 175 DGVALGAVV 183


>sp|Y636_METJA|UNCHARACTERIZED protein MJ0636|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QDGKALGAL 9
+DGK +GA+
Sbjct: 348 EDGKIVGAI 356


>sp|Y1441_METTH|UPF0285 protein MTH_1441|Methanothermobacter thermautotrophicus (strain

Query: 1 QDGKALGAL 9
QDG+ +GA+
Sbjct: 169 QDGRIVGAM 177


>sp|AROE_METM7|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus maripaludis (strain C7 /

Query: 1 QDGKALGAL 9
+D KA+GA+
Sbjct: 82 EDAKAIGAV 90


>sp|AROE_METJA|SHIKIMATE dehydrogenase (NADP(+))|Methanocaldococcus jannaschii (strain ATCC

Query: 1 QDGKALG 7
+DGKA+G
Sbjct: 96 EDGKAIG 102




35|Sequence|171|180|LGALVDSCAP

>sp|AROC_META3|CHORISMATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LGALVDSC 8
LGA+VD C
Sbjct: 21 LGAVVDGC 28


>sp|DNAK_NITMS|CHAPERONE protein DnaK|Nitrosopumilus maritimus (strain SCM1)

Query: 1 LGALVDSCAP 10
+G +VD C P
Sbjct: 286 IGPIVDRCKP 295


>sp|RL15E_METM7|LARGE ribosomal subunit protein eL15|Methanococcus maripaludis (strain C7

Query: 4 LVDSCAP 10
LVDSC P
Sbjct: 132 LVDSCHP 138


>sp|RL15E_METM6|LARGE ribosomal subunit protein eL15|Methanococcus maripaludis (strain C6

Query: 4 LVDSCAP 10
LVDSC P
Sbjct: 132 LVDSCHP 138


>sp|AROC_METVS|CHORISMATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LGALVDSC 8
LGA++D C
Sbjct: 22 LGAVIDGC 29


>sp|AROC_METMP|CHORISMATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LGALVDSC 8
LGA++D C
Sbjct: 21 LGAVIDGC 28


>sp|AROC_METM7|CHORISMATE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 LGALVDSC 8
LGA++D C
Sbjct: 21 LGAVIDGC 28


>sp|AROC_METM5|CHORISMATE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 LGALVDSC 8
LGA++D C
Sbjct: 21 LGAVIDGC 28


>sp|Y989_METJA|UNCHARACTERIZED protein MJ0989|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LGALVDSCAP 10
LGA+V C P
Sbjct: 68 LGAVVKVCGP 77


>sp|AROC_METKA|CHORISMATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 LGALVDSC 8
LGA+VD C
Sbjct: 21 LGAVVDGC 28


>sp|AROC_METJA|CHORISMATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LGALVDSC 8
+GA+VD C
Sbjct: 25 VGAVVDGC 32


>sp|AROC_METST|CHORISMATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LGALVDSC 8
LGA +D C
Sbjct: 23 LGATIDGC 30


>sp|DNAK_CENSY|CHAPERONE protein DnaK|Cenarchaeum symbiosum (strain A)

Query: 1 LGALVDSCAP 10
+G ++D C P
Sbjct: 285 VGPIIDRCRP 294


>sp|AROC_METS3|CHORISMATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 LGALVDSC 8
+GA++D C
Sbjct: 22 VGAVIDGC 29


>sp|AROC_IGNH4|CHORISMATE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 LGALVDSC 8
+GA++D C
Sbjct: 23 IGAVIDGC 30




36|Sequence|176|185|DSCAPGLCPD

>sp|FLAB2_ARCFU|PROBABLE flagellin 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DSCAPGL-CP 9
DSC PG CP
Sbjct: 127 DSCTPGTDCP 136


>sp|RL30_CALMQ|LARGE ribosomal subunit protein uL30|Caldivirga maquilingensis (strain

Query: 2 SCAPGLCP 9
SC PGL P
Sbjct: 138 SCIPGLKP 145


>sp|NADE_METTH|NH(3)-DEPENDENT NAD(+) synthetase|Methanothermobacter thermautotrophicus (strain

Query: 3 CAPGLCPD 10
C PGLC +
Sbjct: 3 CVPGLCSE 10


>sp|PYRC_THEKO|DIHYDROOROTASE kodakarensis (strain ATCC BAA-918

Query: 2 SCAPGL 7
SCAPG+
Sbjct: 159 SCAPGI 164


>sp|GGR_METS3|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 SCAPG 6
SCAPG
Sbjct: 202 SCAPG 206




37|Sequence|181|190|GLCPDWESWD

>sp|ENGB_ARCFU|PROBABLE GTP-binding protein EngB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GLCPDWESW 9
G+ P WE W
Sbjct: 151 GMQPPWEKW 159


>sp|ENGB_HALSA|PROBABLE GTP-binding protein EngB|Halobacterium salinarum (strain ATCC

Query: 1 GLCPDWESW 9
GL P WE W
Sbjct: 160 GLYPPWEQW 168


>sp|ENGB_HALS3|PROBABLE GTP-binding protein EngB|Halobacterium salinarum (strain ATCC 29341

Query: 1 GLCPDWESW 9
GL P WE W
Sbjct: 160 GLYPPWEQW 168


>sp|ENGB_METMA|PROBABLE GTP-binding protein EngB|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GLCPDWESW 9
GL P W++W
Sbjct: 164 GLEPPWQNW 172


>sp|ENGB_METKA|PROBABLE GTP-binding protein EngB|Methanopyrus kandleri (strain AV19 /

Query: 1 GLCPDWESW 9
GL P W W
Sbjct: 154 GLFPPWRQW 162


>sp|ENGB_HALMA|PROBABLE GTP-binding protein EngB|Haloarcula marismortui (strain ATCC 43049

Query: 1 GLCPDWESW 9
GL P W+ W
Sbjct: 160 GLHPPWQQW 168


>sp|PGK_METMP|PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 5 DWESWD 10
DW+SW+
Sbjct: 126 DWKSWE 131


>sp|APE2_SACS2|LEUCYL aminopeptidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LCPDWESWD 10
L P W WD
Sbjct: 310 LFPSWNFWD 318


>sp|VORA_PYRHO|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus horikoshii (strain ATCC

Query: 1 GLCPDWESWD 10
+ P W WD
Sbjct: 113 AMAPPWSVWD 122


>sp|VORA_PYRFU|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GLCPDWESWD 10
+ P W WD
Sbjct: 113 AMAPPWSVWD 122


>sp|VORA_PYRAB|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus abyssi (strain GE5 /

Query: 1 GLCPDWESWD 10
+ P W WD
Sbjct: 114 AMAPPWSVWD 123


>sp|ENGB_HALLT|PROBABLE GTP-binding protein EngB|Halorubrum lacusprofundi (strain ATCC

Query: 1 GLCPDWESW 9
GL P W+ W
Sbjct: 160 GLYPPWQQW 168


>sp|CSG_METTL|S-LAYER protein|Methanothermococcus thermolithotrophicus

Query: 4 PDWESW 9
PDWE++
Sbjct: 364 PDWEAY 369


>sp|SYT_THEVO|THREONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 PDWESWD 10
PD+ +WD
Sbjct: 449 PDFSTWD 455


>sp|MPTN_METMP|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 CPDWE 7
CP WE
Sbjct: 263 CPSWE 267


>sp|FLPA_HALMA|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Haloarcula marismortui (strain

Query: 5 DWESWD 10
DW WD
Sbjct: 33 DWRRWD 38


>sp|ENGB_METMP|PROBABLE GTP-binding protein EngB|Methanococcus maripaludis (strain DSM

Query: 1 GLCPDWESW 9
G P W W
Sbjct: 188 GFLPPWRQW 196


>sp|HCP_METVS|HYDROXYLAMINE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GLCPDWESWD 10
G PD+ +WD
Sbjct: 103 GELPDFVTWD 112


>sp|SYY_THESM|TYROSINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 5 DWESW 9
DW SW
Sbjct: 74 DWHSW 78


>sp|SYY_THEON|TYROSINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 5 DWESW 9
DW SW
Sbjct: 74 DWHSW 78


>sp|SYY_PYRHO|TYROSINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 DWESW 9
DW SW
Sbjct: 74 DWHSW 78


>sp|SYY_PYRFU|TYROSINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 DWESW 9
DW SW
Sbjct: 74 DWHSW 78


>sp|SYY_PYRAB|TYROSINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 5 DWESW 9
DW SW
Sbjct: 74 DWHSW 78


>sp|Y348_METJA|UNCHARACTERIZED protein MJ0348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LCPDWESW 9
L PD ESW
Sbjct: 279 LLPDLESW 286


>sp|SYY_THEKO|TYROSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 DWESW 9
DW SW
Sbjct: 74 DWHSW 78


>sp|SYY_THEGJ|TYROSINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 5 DWESW 9
DW SW
Sbjct: 74 DWHSW 78


>sp|SYT_METBU|THREONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 LCPDWES 8
LCPD E+
Sbjct: 361 LCPDMEA 367


>sp|DSRA_ARCFU|SULFITE reductase, dissimilatory-type subunit alpha|Archaeoglobus fulgidus

Query: 1 GLCPDWESW 9
GLC WE W
Sbjct: 115 GLCDVWEKW 123


>sp|G3P_PYRAE|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GLCPDWES 8
GL P W S
Sbjct: 319 GLAPKWRS 326


>sp|T2MT_METTF|TYPE II restriction enzyme MthTI|Methanothermobacter thermautotrophicus

Query: 3 CPDWESWD 10
C DWE D
Sbjct: 121 CEDWEVKD 128


>sp|DPOL1_METTH|DNA polymerase PolB subunit 1|Methanothermobacter thermautotrophicus

Query: 6 WESWD 10
WE WD
Sbjct: 332 WEYWD 336


>sp|Y085_ARCFU|UNCHARACTERIZED protein AF_0085|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GLCPDW 6
G CPD+
Sbjct: 43 GFCPDY 48


>sp|SYS_ARCFU|SERINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 CPDWESW 9
C DW+S+
Sbjct: 374 CTDWQSY 380


>sp|NADA_THEGJ|QUINOLINATE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 4 PDWESW 9
P+W W
Sbjct: 224 PEWNEW 229


>sp|TRF3_THEVO|TRICORN protease-interacting factor F3|Thermoplasma volcanium (strain ATCC

Query: 4 PDWESW 9
P+W+ W
Sbjct: 305 PEWQFW 310


>sp|BGAL_HALL2|BETA-GALACTOSIDASE BgaH|Haloferax lucentense (strain DSM 14919

Query: 2 LCPDWESWD 10
L PDW+ W+
Sbjct: 413 LSPDWDYWN 421


>sp|GUAAA_IGNH4|GMP synthase [glutamine-hydrolyzing] subunit A|Ignicoccus hospitalis

Query: 1 GLCPDWESWD 10
GL P + +W+
Sbjct: 117 GLAPSFRAWE 126


>sp|SYS_IGNH4|SERINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 CPDWESW 9
C DW+S+
Sbjct: 380 CTDWQSY 386


>sp|SYL1_METS5|LEUCINE--TRNA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 4 PDWESW 9
P W+SW
Sbjct: 452 PLWKSW 457


>sp|SYS_KORCO|SERINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 CPDWESW 9
C DW+S+
Sbjct: 377 CVDWQSY 383


>sp|SYS_AERPE|SERINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 CPDWESW 9
C DW+++
Sbjct: 380 CTDWQAY 386


>sp|PYRG_CALMQ|CTP synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 PDWESW 9
P W+ W
Sbjct: 270 PKWDDW 275


>sp|SUCC2_ARCFU|SUCCINATE--COA ligase [ADP-forming] subunit beta|Archaeoglobus fulgidus (strain

Query: 4 PDWESWD 10
P W WD
Sbjct: 143 PKWGLWD 149


>sp|PGK_METJA|PHOSPHOGLYCERATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 DWESWD 10
DW+ W+
Sbjct: 128 DWKKWE 133


>sp|ADEC_METJA|ADENINE deaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GLCPDWESWD 10
G CP + W+
Sbjct: 189 GHCPKLKGWE 198


>sp|DNLI_METLZ|DNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 LCPDWES 8
L PDW S
Sbjct: 49 LFPDWSS 55


>sp|NOB1_PYRAB|ENDORIBONUCLEASE Nob1|Pyrococcus abyssi (strain GE5 /

Query: 1 GLCPD 5
G+CPD
Sbjct: 143 GICPD 147


>sp|PELO_METVS|PROTEIN pelota homolog|Methanococcus vannielii (strain ATCC 35089

Query: 5 DWESWD 10
+W+ WD
Sbjct: 113 NWKKWD 118


>sp|PELO_METMP|PROTEIN pelota homolog|Methanococcus maripaludis (strain DSM 14266

Query: 5 DWESWD 10
+W+ WD
Sbjct: 113 NWKKWD 118


>sp|PELO_METM7|PROTEIN pelota homolog|Methanococcus maripaludis (strain C7 /

Query: 5 DWESWD 10
+W+ WD
Sbjct: 113 NWKKWD 118


>sp|PELO_METM6|PROTEIN pelota homolog|Methanococcus maripaludis (strain C6 /

Query: 5 DWESWD 10
+W+ WD
Sbjct: 113 NWKKWD 118


>sp|PELO_METM5|PROTEIN pelota homolog|Methanococcus maripaludis (strain C5 /

Query: 5 DWESWD 10
+W+ WD
Sbjct: 113 NWKKWD 118


>sp|PELO_META3|PROTEIN pelota homolog|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 5 DWESWD 10
+W+ WD
Sbjct: 113 NWKKWD 118


>sp|ENGB_HALWD|PROBABLE GTP-binding protein EngB|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GLCPDWESW 9
GL P W+ W
Sbjct: 160 GLYPPWQQW 168


>sp|KTHY_METS3|PROBABLE thymidylate kinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 GLCPD 5
G+CPD
Sbjct: 185 GICPD 189


>sp|RS10_PICTO|SMALL ribosomal subunit protein uS10|Picrophilus torridus (strain ATCC

Query: 4 PDWESWD 10
P W+ W+
Sbjct: 60 PTWDRWE 66


>sp|CBIN_ARCFU|COBALT transport protein CbiN|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LCPDWESW 9
L PD+E W
Sbjct: 36 LKPDYEPW 43


>sp|Y1094_HALWD|PUTATIVE heme-binding protein HQ_1094A|Haloquadratum walsbyi (strain DSM

Query: 5 DWESW 9
DW++W
Sbjct: 21 DWDAW 25


>sp|PGP_HALLT|PHOSPHOGLYCOLATE phosphatase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 LCPDWES 8
L PDW++
Sbjct: 27 LLPDWDA 33


>sp|GGGPS_HALMA|GERANYLGERANYLGLYCERYL phosphate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 5 DWESWD 10
DW WD
Sbjct: 3 DWADWD 8


>sp|HLY_HALMT|HALOLYSIN mediterranei (strain ATCC 33500

Query: 1 GLCPDWESWD 10
G CP S+D
Sbjct: 466 GTCPTTRSYD 475


>sp|DADD_METKA|5'-DEOXYADENOSINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 3 CPDWE 7
C DWE
Sbjct: 42 CEDWE 46


>sp|HMGCS_HALVD|HYDROXYMETHYLGLUTARYL-COA synthase|Haloferax volcanii (strain ATCC 29605

Query: 5 DWESWD 10
D+E+WD
Sbjct: 284 DFETWD 289




38|Sequence|186|195|WESWDPQKPV

>sp|SYC_PYRCJ|CYSTEINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 WESWDPQKP 9
W+SW P +P
Sbjct: 188 WKSWSPGEP 196


>sp|SYC_PYRAR|CYSTEINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 WESWDPQKP 9
W+SW P +P
Sbjct: 188 WKSWTPGEP 196


>sp|SYC_PYRAE|CYSTEINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 WESWDPQKP 9
W+SW P +P
Sbjct: 190 WKSWTPGEP 198


>sp|RFCL_METS3|REPLICATION factor C large subunit|Methanobrevibacter smithii (strain ATCC

Query: 1 WESWDPQKPV 10
W++ +PQKP+
Sbjct: 32 WKAGNPQKPL 41


>sp|SYC_PYRNV|CYSTEINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 WESWDPQKP 9
W+SW P +P
Sbjct: 188 WKSWTPGEP 196


>sp|SYC_PYRIL|CYSTEINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 WESWDPQKP 9
W+SW P +P
Sbjct: 188 WKSWTPGEP 196


>sp|Y1377_METTH|UPF0127 protein MTH_1377|Methanothermobacter thermautotrophicus (strain

Query: 1 WESWDPQKP 9
W+ ++P+KP
Sbjct: 85 WQIYNPRKP 93


>sp|SYT_PYRAR|THREONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 SWDPQKP 9
SWDP+ P
Sbjct: 12 SWDPRDP 18


>sp|AGLS_HALVD|DOLICHOL phosphate-mannose mannosyltransferase|Haloferax volcanii (strain

Query: 2 ESWDPQKPV 10
++WDP+ P+
Sbjct: 63 DAWDPKPPL 71


>sp|FLPA_HALLT|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Halorubrum lacusprofundi (strain

Query: 1 WESWDPQK 8
W +WDP +
Sbjct: 37 WRAWDPGR 44


>sp|RFCL_METTH|REPLICATION factor C large subunit|Methanothermobacter thermautotrophicus

Query: 1 WESWDPQKPV 10
W++ PQKP+
Sbjct: 32 WKAGKPQKPL 41


>sp|PELO_META3|PROTEIN pelota homolog|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 WESWDPQK 8
W+ WD Q+
Sbjct: 114 WKKWDLQR 121


>sp|TRPF_AERPE|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Aeropyrum pernix (strain ATCC 700893

Query: 3 SWDPQKP 9
+W PQ+P
Sbjct: 112 AWKPQEP 118


>sp|RNZ_THEKO|RIBONUCLEASE Z|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 WDPQKPV 10
WD QKP+
Sbjct: 80 WDRQKPL 86


>sp|LEUC_METTH|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanothermobacter

Query: 4 WDPQKPV 10
WDP+K V
Sbjct: 55 WDPEKIV 61


>sp|SYC_STAMF|CYSTEINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 WESWDPQKP 9
W++W P +P
Sbjct: 184 WKAWKPGEP 192


>sp|DCHI_THEKO|DIACETYLCHITOBIOSE deacetylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 WESWDP 6
WE W+P
Sbjct: 224 WELWEP 229


>sp|SYFA_SULAC|PHENYLALANINE--TRNA ligase alpha subunit|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 SWDPQ 7
SWDPQ
Sbjct: 293 SWDPQ 297


>sp|Y1614_METAC|MACRO domain-containing protein MA_1614|Methanosarcina acetivorans

Query: 5 DPQKP 9
DPQKP
Sbjct: 2 DPQKP 6


>sp|MTRD_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanocaldococcus jannaschii (strain

Query: 5 DPQKP 9
DPQKP
Sbjct: 122 DPQKP 126


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WESWD 5
W SWD
Sbjct: 2505 WNSWD 2509


>sp|FLPA_METAC|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanosarcina acetivorans

Query: 1 WESWDPQK 8
+ +WDP++
Sbjct: 45 YRTWDPRR 52


>sp|PGK_METMP|PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 WESWDPQKP 9
W+SW+ P
Sbjct: 127 WKSWEEITP 135


>sp|IDH_HALVD|ISOCITRATE dehydrogenase [NADP]|Haloferax volcanii (strain ATCC 29605

Query: 1 WESWDPQKP 9
WE +D ++P
Sbjct: 262 WEEYDGERP 270


>sp|FLPA_METBF|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanosarcina barkeri (strain

Query: 1 WESWDPQK 8
+ +WDP++
Sbjct: 45 YRTWDPRR 52


>sp|SRP54_HALVD|SIGNAL recognition particle 54 kDa|Haloferax volcanii (strain ATCC 29605

Query: 2 ESWDPQK 8
E WDP++
Sbjct: 313 EDWDPEE 319


>sp|GGGPS_HYPBU|GERANYLGERANYLGLYCERYL phosphate synthase|Hyperthermus butylicus (strain DSM 5456

Query: 5 DPQKPV 10
DP+KP+
Sbjct: 26 DPEKPI 31


>sp|FLPA_METMA|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanosarcina mazei (strain

Query: 1 WESWDPQK 8
+ +WDP++
Sbjct: 45 YRTWDPRR 52


>sp|ARNS_SULAC|SERINE/THREONINE-PROTEIN kinase ArnS|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 ESWDP 6
E+WDP
Sbjct: 302 ENWDP 306


>sp|LEUC_METAC|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina

Query: 4 WDPQKPV 10
WDP K V
Sbjct: 56 WDPSKIV 62


>sp|SRP54_NATPD|SIGNAL recognition particle 54 kDa|Natronomonas pharaonis (strain ATCC

Query: 2 ESWDPQ 7
E WDP+
Sbjct: 312 EDWDPE 317


>sp|LEUC_METMA|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina mazei

Query: 4 WDPQKPV 10
WDP K V
Sbjct: 56 WDPSKIV 62


>sp|LEUC1_METKA|3-ISOPROPYLMALATE dehydratase large subunit 1|Methanopyrus kandleri (strain AV19 /

Query: 4 WDPQKPV 10
WDP K V
Sbjct: 54 WDPSKIV 60


>sp|PELO_METMP|PROTEIN pelota homolog|Methanococcus maripaludis (strain DSM 14266

Query: 1 WESWDPQK 8
W+ WD ++
Sbjct: 114 WKKWDIER 121


>sp|MPTE_PYRFU|6-HYDROXYMETHYL-7,8-DIHYDROPTERIN pyrophosphokinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WESWDP 6
WE W P
Sbjct: 3 WEEWKP 8


>sp|RFCL_METST|REPLICATION factor C large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 1 WESWDPQKPV 10
W PQKP+
Sbjct: 32 WSKGVPQKPL 41


>sp|EF1A_METTP|ELONGATION factor 1-alpha|Methanothrix thermoacetophila (strain DSM 6194

Query: 5 DPQKPV 10
+PQKPV
Sbjct: 218 EPQKPV 223


>sp|DPOL1_METTH|DNA polymerase PolB subunit 1|Methanothermobacter thermautotrophicus

Query: 1 WESWD 5
WE WD
Sbjct: 332 WEYWD 336


>sp|SRP54_HALMA|SIGNAL recognition particle 54 kDa|Haloarcula marismortui (strain ATCC

Query: 2 ESWDPQ 7
E WDP+
Sbjct: 314 EDWDPE 319


>sp|RL37_METST|LARGE ribosomal subunit protein eL37|Methanosphaera stadtmanae (strain

Query: 3 SWDPQKPV 10
SW +KPV
Sbjct: 48 SWQNKKPV 55


>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 4 WDPQKPV 10
WDP K V
Sbjct: 744 WDPPKDV 750


>sp|FLPA_METMZ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanosarcina mazei

Query: 1 WESWDPQK 8
+ +WDP++
Sbjct: 45 YRTWDPRR 52


>sp|RTCA_THEON|RNA 3'-terminal phosphate cyclase|Thermococcus onnurineus (strain NA1)

Query: 2 ESWDPQKPV 10
E W+ +KP+
Sbjct: 169 EPWEERKPL 177


>sp|ASOR_PYRFU|ALIPHATIC sulfonate oxidoreductase, WOR-like subunit|Pyrococcus furiosus

Query: 4 WDPQK 8
WDP+K
Sbjct: 548 WDPRK 552


>sp|IORA_PYRAB|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus abyssi (strain GE5 /

Query: 4 WDPQK 8
WDP+K
Sbjct: 611 WDPEK 615




39|Sequence|191|200|PQKPVDNARE

>sp|Y2001_METTM|UNCHARACTERIZED protein MTBMA_p00010|Methanothermobacter marburgensis (strain ATCC

Query: 2 QKPVDNAR 9
+KPVDN R
Sbjct: 776 RKPVDNER 783


>sp|RS3_METS5|SMALL ribosomal subunit protein uS3|Metallosphaera sedula (strain ATCC

Query: 1 PQKPVDNAR 9
P+KP NAR
Sbjct: 86 PEKPELNAR 94


>sp|CAPPA_CALMQ|PHOSPHOENOLPYRUVATE carboxylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 PVDNARE 10
PVDNA++
Sbjct: 292 PVDNAKD 298




40|Sequence|196|205|DNAREAMQQA

>sp|SYK_SACS2|LYSINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DNAREAMQ 8
DNAR+AM+
Sbjct: 163 DNARKAME 170


>sp|RS4E_METTH|SMALL ribosomal subunit protein eS4|Methanothermobacter

Query: 1 DNAREA 6
DNAREA
Sbjct: 57 DNAREA 62


>sp|RS4E_METJA|SMALL ribosomal subunit protein eS4|Methanocaldococcus jannaschii

Query: 1 DNAREA 6
DNAREA
Sbjct: 57 DNAREA 62


>sp|RS4E_METVS|SMALL ribosomal subunit protein eS4|Methanococcus vannielii (strain

Query: 1 DNAREA 6
DNAREA
Sbjct: 57 DNAREA 62


>sp|RS4E_METVA|SMALL ribosomal subunit protein eS4|Methanococcus vannielii

Query: 1 DNAREA 6
DNAREA
Sbjct: 57 DNAREA 62


>sp|RS4E_METMP|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain

Query: 1 DNAREA 6
DNAREA
Sbjct: 57 DNAREA 62


>sp|RS4E_METM6|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain

Query: 1 DNAREA 6
DNAREA
Sbjct: 57 DNAREA 62


>sp|RS4E_METM7|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain

Query: 1 DNAREA 6
DNAREA
Sbjct: 57 DNAREA 62


>sp|KDGK_SACS2|2-DEHYDRO-3-DEOXYGLUCONOKINASE/2-DEHYDRO-3-DEOXYGALACTONOKINASE solfataricus (strain ATCC 35092

Query: 1 DNAREAMQQA 10
DNA+EA+ +A
Sbjct: 143 DNAKEAVIKA 152


>sp|SYM_METBU|METHIONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DNAREAMQ 8
+NA+EAM+
Sbjct: 424 ENAKEAME 431


>sp|RS4E_METM5|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain

Query: 1 DNAREA 6
DNAREA
Sbjct: 57 DNAREA 62


>sp|RS4E_META3|SMALL ribosomal subunit protein eS4|Methanococcus aeolicus (strain ATCC

Query: 1 DNAREA 6
DNAREA
Sbjct: 57 DNAREA 62


>sp|HEM2_ARCFU|DELTA-AMINOLEVULINIC acid dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NAREAMQQ 9
NAREAM++
Sbjct: 226 NAREAMRE 233


>sp|FOLCP_HALSA|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 1 DNAREAMQQA 10
D+AR+A+++A
Sbjct: 435 DDARDALERA 444


>sp|PROA_METBU|GAMMA-GLUTAMYL phosphate reductase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DNAREAMQQA 10
DNA EAM +A
Sbjct: 28 DNALEAMAKA 37


>sp|RL10E_THEPD|LARGE ribosomal subunit protein uL16|Thermofilum pendens (strain DSM 2475

Query: 1 DNAREAMQQA 10
D+A+EA+++A
Sbjct: 143 DHAKEALRRA 152




41|Sequence|201|210|AMQQADDWLG

>sp|DPHB_METBU|DIPHTHINE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 3 QQADDWL 9
Q A+DWL
Sbjct: 64 QHAEDWL 70


>sp|ATGT_METKA|TRNA-GUANINE(15) transglycosylase|Methanopyrus kandleri (strain AV19 /

Query: 5 ADDWLG 10
AD+WLG
Sbjct: 418 ADEWLG 423


>sp|Y977_METKA|UNCHARACTERIZED glycosyltransferase MK0977|Methanopyrus kandleri (strain AV19 /

Query: 1 AMQQADDW 8
A++QA DW
Sbjct: 312 AIEQAIDW 319




42|Sequence|206|215|DDWLGVPQVI

>sp|NNR_PYRAE|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Pyrobaculum aerophilum (strain

Query: 2 DWLGVPQVI 10
+WLGVP+++
Sbjct: 17 EWLGVPRLV 25


>sp|HELS_METBU|ATP-DEPENDENT DNA helicase Hel308|Methanococcoides burtonii (strain DSM 6242

Query: 2 DWLGVPQVI 10
DWLGV +I
Sbjct: 109 DWLGVNDII 117


>sp|DNLI_IGNH4|DNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 DWLGVPQV 9
DW G P++
Sbjct: 55 DWYGYPEI 62


>sp|Y1403_METJA|UNCHARACTERIZED protein MJ1403|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DDWLGVP 7
D WLG P
Sbjct: 100 DSWLGYP 106


>sp|URE1_SULTO|UREASE subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DDWLGVPQVI 10
+DW +P+VI
Sbjct: 220 EDWGAMPRVI 229


>sp|EF1A_THEVO|ELONGATION factor 1-alpha|Thermoplasma volcanium (strain ATCC 51530

Query: 4 LGVPQVI 10
LGVPQ++
Sbjct: 138 LGVPQIV 144


>sp|ATGT_METKA|TRNA-GUANINE(15) transglycosylase|Methanopyrus kandleri (strain AV19 /

Query: 1 DDWLGV 6
D+WLGV
Sbjct: 419 DEWLGV 424


>sp|ATGT_KORCO|TRNA-GUANINE(15) transglycosylase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 WLGVPQ 8
W+G PQ
Sbjct: 163 WVGTPQ 168


>sp|RS3_IGNH4|SMALL ribosomal subunit protein uS3|Ignicoccus hospitalis (strain

Query: 1 DDWLGVP 7
++W G+P
Sbjct: 75 EEWFGIP 81


>sp|DNLI_AERPE|DNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 DWLGVPQV 9
DW G+P++
Sbjct: 52 DWKGLPEL 59


>sp|EF1A_PICTO|ELONGATION factor 1-alpha|Picrophilus torridus (strain ATCC 700027

Query: 4 LGVPQVI 10
LGVPQ+I
Sbjct: 138 LGVPQLI 144


>sp|RAD50_THEVO|DNA double-strand break repair Rad50|Thermoplasma volcanium (strain

Query: 2 DWLGVPQVI 10
D G+PQVI
Sbjct: 856 DSSGIPQVI 864


>sp|DNLI_STAMF|DNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 DWLGVPQV 9
DW G+P++
Sbjct: 52 DWKGLPEL 59


>sp|Y1571_METJA|UNCHARACTERIZED protein MJ1571|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LGVPQVI 10
LGVP+V+
Sbjct: 179 LGVPEVV 185


>sp|DNLI_HYPBU|DNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 DWLGVPQV 9
DW G+P++
Sbjct: 54 DWKGLPEL 61


>sp|DNLI_SULZI|DNA ligase|Sulfophobococcus zilligii

Query: 2 DWLGVPQV 9
DW G+P++
Sbjct: 55 DWKGMPEL 62


>sp|SYE_METJA|GLUTAMATE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DWLGV 6
DWLGV
Sbjct: 151 DWLGV 155


>sp|RPO1N_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus shibatae (strain ATCC

Query: 2 DWLGVPQVI 10
D +GVP++I
Sbjct: 335 DEVGVPEII 343


>sp|NREA_ARCFU|DNA repair protein NreA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DDWLGV 6
+DW+GV
Sbjct: 279 EDWIGV 284


>sp|SYK_METKA|LYSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 DDWLGVP 7
+D+LGVP
Sbjct: 92 EDYLGVP 98


>sp|RPO1N_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus solfataricus (strain

Query: 2 DWLGVPQVI 10
D +GVP++I
Sbjct: 335 DEVGVPEII 343


>sp|EF1A_THEAC|ELONGATION factor 1-alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 LGVPQVI 10
LGVPQ++
Sbjct: 138 LGVPQMV 144


>sp|COBS_METKA|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanopyrus kandleri (strain AV19 /

Query: 3 WLGVPQV 9
WLG+P V
Sbjct: 33 WLGLPAV 39


>sp|URE1_HALWD|UREASE subunit alpha|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DDWLGVPQVI 10
+DW P VI
Sbjct: 222 EDWGSTPDVI 231


>sp|NADE_METAC|NH(3)-DEPENDENT NAD(+) synthetase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DWLGV 6
DWLG+
Sbjct: 76 DWLGI 80


>sp|SYE_CENSY|GLUTAMATE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 2 DWLGV 6
DWLG+
Sbjct: 154 DWLGI 158


>sp|NADE_STAMF|NH(3)-DEPENDENT NAD(+) synthetase|Staphylothermus marinus (strain ATCC 43588

Query: 2 DWLGVPQVI 10
D+LG+P+ I
Sbjct: 181 DYLGLPEKI 189


>sp|KAD6_METS5|PUTATIVE adenylate kinase|Metallosphaera sedula (strain ATCC 51363

Query: 2 DWLGVPQV 9
DWL +P V
Sbjct: 162 DWLDLPDV 169


>sp|NADE_METMA|NH(3)-DEPENDENT NAD(+) synthetase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DWLGV 6
DWLG+
Sbjct: 76 DWLGI 80




43|Sequence|211|220|VPQVITPEEI

>sp|MALQ_THEKO|4-ALPHA-GLUCANOTRANSFERASE kodakarensis (strain ATCC BAA-918

Query: 1 VPQVITPEE 9
VP+ TPEE
Sbjct: 446 VPEAATPEE 454


>sp|FEN_SACS2|FLAP endonuclease 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PQVITPEE 9
PQV+ PEE
Sbjct: 288 PQVVKPEE 295


>sp|SYY_METTH|TYROSINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 VPQVITPEEI 10
V +VITPEE+
Sbjct: 12 VLEVITPEEL 21


>sp|THIL_PYRHO|THIAMINE-MONOPHOSPHATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VPQVITPEE 9
VP +TPEE
Sbjct: 49 VPDFMTPEE 57


>sp|RL1_ARCFU|LARGE ribosomal subunit protein uL1|Archaeoglobus fulgidus (strain ATCC

Query: 4 VITPEEI 10
VITPEEI
Sbjct: 82 VITPEEI 88


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 VITPEEI 10
V+TPEE+
Sbjct: 599 VVTPEEV 605


>sp|SPEE_PYRNV|POLYAMINE aminopropyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 PQVITPEEI 10
P +TPEE+
Sbjct: 249 PTALTPEEV 257


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 VITPEEI 10
V+TPEE+
Sbjct: 599 VVTPEEV 605


>sp|MTRG_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit G|Methanopyrus kandleri (strain AV19

Query: 1 VPQVITPEE 9
VP+++ PE+
Sbjct: 7 VPKMVAPED 15


>sp|IF6_HYPBU|TRANSLATION initiation factor 6|Hyperthermus butylicus (strain DSM 5456

Query: 1 VPQVITPEEI 10
+P+++ PEE+
Sbjct: 70 LPRIVKPEEL 79


>sp|IF6_METVS|TRANSLATION initiation factor 6|Methanococcus vannielii (strain ATCC 35089

Query: 1 VPQVITPEEI 10
VP ++T +EI
Sbjct: 70 VPNIVTSKEI 79


>sp|RNZ_PYRAE|RIBONUCLEASE Z|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 QVITPEEI 10
++ITPEE+
Sbjct: 168 RIITPEEV 175


>sp|ABLA_METMA|L-LYSINE 2,3-aminomutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VPQVITPE 8
+PQ ITPE
Sbjct: 208 LPQRITPE 215


>sp|TRM10_THEKO|TRNA (guanine(9)-/adenine(9)-N1)-methyltransferase|Thermococcus

Query: 4 VITPEEI 10
V+TPEE+
Sbjct: 85 VLTPEEL 91


>sp|CMR6_SACS2|CRISPR system CMR subunit Cmr6|Saccharolobus solfataricus (strain ATCC

Query: 1 VPQVITP 7
VP VITP
Sbjct: 204 VPDVITP 210


>sp|FEN_SULTO|FLAP endonuclease 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PQVITPEE 9
PQV+ P+E
Sbjct: 290 PQVVEPKE 297


>sp|RNZ_PYRIL|RIBONUCLEASE Z|Pyrobaculum islandicum (strain DSM 4184

Query: 3 QVITPEEI 10
++ITPEE+
Sbjct: 168 RLITPEEV 175


>sp|THIL_PYRAB|THIAMINE-MONOPHOSPHATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 VPQVITPEE 9
VP +TPE+
Sbjct: 50 VPDFMTPED 58


>sp|SEPS_METLZ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 PQVITPEE 9
P VITP E
Sbjct: 24 PSVITPPE 31


>sp|KDXD_HALVD|PROBABLE 2-keto-3-deoxyxylonate dehydratase|Haloferax volcanii (strain ATCC

Query: 2 PQVITPEEI 10
P V+TPE++
Sbjct: 192 PCVVTPEDV 200




44|Sequence|216|225|TPEEIIHPDV

>sp|SYH_SULAC|HISTIDINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 EIIHPDV 10
E+IHPDV
Sbjct: 279 EVIHPDV 285


>sp|SYM_THEON|METHIONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 TPEEIIHP 8
TPEE+I+P
Sbjct: 164 TPEELINP 171


>sp|COBD_THEVO|PROBABLE cobalamin biosynthesis protein CobD|Thermoplasma volcanium

Query: 2 PEEIIHPDV 10
P+E IHP V
Sbjct: 18 PKEYIHPVV 26


>sp|COBD_THEAC|PROBABLE cobalamin biosynthesis protein CobD|Thermoplasma acidophilum

Query: 2 PEEIIHPDV 10
P+E IHP V
Sbjct: 18 PKEYIHPVV 26


>sp|RL10E_META3|LARGE ribosomal subunit protein uL16|Methanococcus aeolicus (strain ATCC

Query: 1 TPEEIIH 7
TPE +IH
Sbjct: 138 TPENVIH 144


>sp|SRP54_PYRAB|SIGNAL recognition particle 54 kDa|Pyrococcus abyssi (strain GE5 /

Query: 1 TPEEIIHPDV 10
T EE+++PD+
Sbjct: 383 TEEELMNPDI 392


>sp|HERA_SULAC|DNA double-strand break repair helicase|Sulfolobus acidocaldarius

Query: 3 EEIIHPDV 10
EEI+H DV
Sbjct: 484 EEIVHSDV 491


>sp|Y1856_ARCFU|UNCHARACTERIZED protein AF_1856|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 EIIHPD 9
EI+HPD
Sbjct: 241 EILHPD 246


>sp|END3_SULAC|ENDONUCLEASE III|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 TPEEIIHPDV 10
TP+ I H D+
Sbjct: 67 TPDRIKHADI 76


>sp|SRP54_PYRCJ|SIGNAL recognition particle 54 kDa|Pyrobaculum calidifontis (strain DSM

Query: 1 TPEEIIHPDV 10
T EE+ HP+V
Sbjct: 376 TMEELKHPEV 385


>sp|SRP54_THEON|SIGNAL recognition particle 54 kDa|Thermococcus onnurineus (strain NA1)

Query: 1 TPEEIIHPDV 10
T EE+ HP++
Sbjct: 383 TEEELEHPEI 392


>sp|CAS1A_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 TPEEIIHPD 9
TP++ +PD
Sbjct: 262 TPDDFTYPD 270


>sp|THSB_AERPE|THERMOSOME subunit beta|Aeropyrum pernix (strain ATCC 700893

Query: 3 EEIIHPDV 10
+E++HPD+
Sbjct: 230 KEVVHPDM 237


>sp|RFCL_METBU|REPLICATION factor C large subunit|Methanococcoides burtonii (strain DSM 6242

Query: 1 TPEEIIH 7
TPE +IH
Sbjct: 259 TPENLIH 265


>sp|RFCL_ARCFU|REPLICATION factor C large subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TPEEIIH 7
+PE++IH
Sbjct: 260 SPEDVIH 266


>sp|UVRC_METAC|UVRABC system protein C|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PEEIIHPDV 10
PEE+I P V
Sbjct: 293 PEELIVPQV 301


>sp|IF6_STAMF|TRANSLATION initiation factor 6|Staphylothermus marinus (strain ATCC 43588

Query: 5 IIHPDV 10
+IHPD+
Sbjct: 160 VIHPDI 165


>sp|CDC6_DESA1|ORC1-TYPE DNA replication protein|Desulfurococcus amylolyticus (strain DSM

Query: 4 EIIHPD 9
E++HPD
Sbjct: 23 EVLHPD 28


>sp|ATGT_PICTO|TRNA-GUANINE(15) transglycosylase|Picrophilus torridus (strain ATCC 700027

Query: 1 TPEEIIHPD 9
TP+E++H +
Sbjct: 276 TPQELLHEE 284


>sp|RS9_PYRFU|SMALL ribosomal subunit protein uS9|Pyrococcus furiosus (strain ATCC

Query: 2 PEEIIHPDV 10
P EII P++
Sbjct: 32 PVEIIEPEI 40


>sp|DNAG_METMP|DNA primase DnaG|Methanococcus maripaludis (strain DSM 14266

Query: 1 TPEEIIHP 8
TP+EI+ P
Sbjct: 283 TPKEIVEP 290


>sp|RS9_THEKO|SMALL ribosomal subunit protein uS9|Thermococcus kodakarensis (strain

Query: 2 PEEIIHPDV 10
P EII P++
Sbjct: 32 PVEIIEPEI 40


>sp|RL7A_NITMS|LARGE ribosomal subunit protein eL8|Nitrosopumilus maritimus (strain

Query: 1 TPEEIIHP 8
TPE++++P
Sbjct: 11 TPEDLVNP 18


>sp|SRP54_PYRFU|SIGNAL recognition particle 54 kDa|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TPEEIIHPDV 10
T EE+++P++
Sbjct: 383 TEEELLNPEI 392




45|Sequence|221|230|IHPDVDEHSV

>sp|COFH2_METMP|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanococcus maripaludis (strain DSM

Query: 1 IHPDVDEH 8
IHPDVD H
Sbjct: 106 IHPDVDTH 113


>sp|AMPPA_METTP|AMP phosphorylase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 HPDVDEHSV 10
HP VD+HS+
Sbjct: 156 HPVVDKHSI 164


>sp|IF6_METKA|TRANSLATION initiation factor 6|Methanopyrus kandleri (strain AV19 /

Query: 1 IHPDVDEHSV 10
+HPD+D+H++
Sbjct: 113 VHPDLDDHAL 122


>sp|AMPPA_METMJ|AMP phosphorylase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 HPDVDEHSV 10
HP VD+HS+
Sbjct: 159 HPIVDKHSI 167


>sp|AMPPA_METAR|AMP phosphorylase|Methanocella arvoryzae (strain DSM 22066

Query: 1 IHPDVDEHSV 10
+HP +D HS+
Sbjct: 157 VHPVMDHHSI 166


>sp|IF6_METPE|TRANSLATION initiation factor 6|Methanosphaerula palustris (strain ATCC

Query: 1 IHPDVDEHSV 10
+HPD+D ++
Sbjct: 111 VHPDMDNATI 120


>sp|CPGS_THEON|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus onnurineus (strain

Query: 1 IHPDVDEHSV 10
I+PDVD H +
Sbjct: 304 INPDVDLHFI 313


>sp|IF6_NITMS|TRANSLATION initiation factor 6|Nitrosopumilus maritimus (strain SCM1)

Query: 1 IHPDVDEHSV 10
IHP+ DE +
Sbjct: 158 IHPEADEEDM 167


>sp|AMPPA_METBF|AMP phosphorylase|Methanosarcina barkeri (strain Fusaro /

Query: 2 HPDVDEHSV 10
HP +D+HS+
Sbjct: 157 HPIMDKHSI 165


>sp|RL2_METAC|LARGE ribosomal subunit protein uL2|Methanosarcina acetivorans (strain

Query: 2 HPDVDEHS 9
HP VDE+S
Sbjct: 30 HPRVDENS 37


>sp|RRP42_SACI1|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 IHPDVDEHSV 10
+ PD+DE S+
Sbjct: 211 VDPDLDEESI 220


>sp|AMPPA_METAC|AMP phosphorylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 HPDVDEHSV 10
HP +D+HS+
Sbjct: 157 HPVMDKHSI 165


>sp|AMPPA_METBU|AMP phosphorylase|Methanococcoides burtonii (strain DSM 6242

Query: 2 HPDVDEHSV 10
HP +D+HS+
Sbjct: 158 HPIMDKHSI 166


>sp|RRP42_SACI7|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 IHPDVDEHSV 10
+ PD+DE S+
Sbjct: 211 VDPDLDEESI 220


>sp|RRP42_SACI6|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.16.4 /

Query: 1 IHPDVDEHSV 10
+ PD+DE S+
Sbjct: 211 VDPDLDEESI 220


>sp|RRP42_SACI2|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 IHPDVDEHSV 10
+ PD+DE S+
Sbjct: 211 VDPDLDEESI 220


>sp|GATA_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 1 IHPDVDE 7
IHPDV++
Sbjct: 261 IHPDVEK 267


>sp|AMPPA_METMA|AMP phosphorylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 HPDVDEHSV 10
HP +D+HS+
Sbjct: 158 HPIMDKHSI 166


>sp|RL2_METBU|LARGE ribosomal subunit protein uL2|Methanococcoides burtonii (strain

Query: 2 HPDVDEHS 9
HP VDE S
Sbjct: 30 HPRVDEES 37


>sp|GATA_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina mazei (strain ATCC

Query: 1 IHPDVDE 7
IHPDV++
Sbjct: 262 IHPDVEK 268


>sp|RRP42_SACI4|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.14.25 /

Query: 1 IHPDVDEHSV 10
+ PD+DE S+
Sbjct: 211 VDPDLDEESI 220


>sp|RRP42_SACI3|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.16.27)

Query: 1 IHPDVDEHSV 10
+ PD+DE S+
Sbjct: 211 VDPDLDEESI 220


>sp|RRP42_SACS2|EXOSOME complex component Rrp42|Saccharolobus solfataricus (strain ATCC

Query: 1 IHPDVDEHSV 10
+ PD+DE S+
Sbjct: 211 VDPDLDEESI 220


>sp|SYC_THEPD|CYSTEINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 IHPDVDEH 8
+HP V EH
Sbjct: 109 VHPRVTEH 116


>sp|Y1447_ARCFU|UNCHARACTERIZED protein AF_1447|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IHPDVDEHSV 10
I+PDVD V
Sbjct: 22 IYPDVDNLQV 31


>sp|PYRB_THEGJ|ASPARTATE carbamoyltransferase catalytic subunit|Thermococcus gammatolerans

Query: 1 IHPDVD--EHSV 10
IHP+VD EH++
Sbjct: 274 IHPEVDKSEHAL 285


>sp|IF6_HALLT|TRANSLATION initiation factor 6|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 IHPDVDE 7
+ PDVDE
Sbjct: 25 VRPDVDE 31


>sp|RL2_METBF|LARGE ribosomal subunit protein uL2|Methanosarcina barkeri (strain

Query: 2 HPDVDEHS 9
HP VDE++
Sbjct: 30 HPRVDENT 37


>sp|RSMA_METVS|PROBABLE ribosomal RNA small subunit|Methanococcus vannielii (strain ATCC

Query: 3 PDVDEHS 9
PD DE+S
Sbjct: 137 PDTDEYS 143


>sp|PYRB_PYRFU|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus furiosus (strain

Query: 1 IHPDVDE 7
IHP+VD+
Sbjct: 274 IHPEVDK 280


>sp|AMPPA_METB6|AMP phosphorylase|Methanoregula boonei (strain DSM 21154

Query: 3 PDVDEHSV 10
P VD+HS+
Sbjct: 161 PIVDKHSI 168


>sp|AMPPA_METLZ|AMP phosphorylase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 PDVDEHSV 10
P VD+HS+
Sbjct: 160 PVVDKHSI 167


>sp|IF6_METHJ|TRANSLATION initiation factor 6|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 IHPDVDE 7
+HP++DE
Sbjct: 111 VHPEMDE 117


>sp|PYRB_PYRHO|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus horikoshii

Query: 1 IHPDVDE 7
IHP+VD+
Sbjct: 274 IHPEVDK 280


>sp|RL2_METMA|LARGE ribosomal subunit protein uL2|Methanosarcina mazei (strain ATCC

Query: 2 HPDVDEHS 9
HP VDE++
Sbjct: 30 HPRVDENT 37


>sp|RL30_HYPBU|LARGE ribosomal subunit protein uL30|Hyperthermus butylicus (strain DSM

Query: 1 IHPDVD 6
+HPDV+
Sbjct: 31 VHPDVE 36


>sp|CPGS_PYRAB|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus abyssi (strain GE5 /

Query: 1 IHPDVDEH 8
I+PD D H
Sbjct: 300 INPDADVH 307


>sp|PYRB_THEKO|ASPARTATE carbamoyltransferase catalytic subunit|Thermococcus kodakarensis

Query: 1 IHPDVDE 7
IHP+VD+
Sbjct: 274 IHPEVDK 280


>sp|PYRB_METKA|ASPARTATE carbamoyltransferase catalytic subunit|Methanopyrus kandleri

Query: 1 IHPDVDE 7
I PDVDE
Sbjct: 275 IEPDVDE 281


>sp|SYC_STAMF|CYSTEINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 IHPDVDEH 8
+HP V EH
Sbjct: 111 LHPRVTEH 118


>sp|PYRB_PYRAB|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus abyssi (strain

Query: 1 IHPDVD 6
IHP+VD
Sbjct: 274 IHPEVD 279


>sp|MV3K_THEAC|MEVALONATE 3-kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IHPDVDEHSV 10
+ PD+D H V
Sbjct: 122 LKPDLDPHDV 131


>sp|PYRB_THEON|ASPARTATE carbamoyltransferase catalytic subunit|Thermococcus onnurineus

Query: 1 IHPDVD 6
IHP+VD
Sbjct: 274 IHPEVD 279


>sp|GCSPB_PYRFU|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus furiosus

Query: 1 IHPDVDEHSV 10
IHP DE +V
Sbjct: 101 IHPYQDERTV 110


>sp|SYE_NANEQ|GLUTAMATE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 HPDVD 6
HPDVD
Sbjct: 430 HPDVD 434




46|Sequence|226|235|DEHSVMTYLS

>sp|Y880_METJA|UNCHARACTERIZED protein MJ0880|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EHSVMTYLS 10
+HS+ TY+S
Sbjct: 268 KHSIGTYIS 276


>sp|ENDA_HALMA|TRNA-SPLICING endonuclease|Haloarcula marismortui (strain ATCC 43049

Query: 1 DEHSVMTYL 9
DE S +TYL
Sbjct: 142 DEESEVTYL 150


>sp|ENDA_NATPD|TRNA-SPLICING endonuclease|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DEHSVMTYL 9
DE S +TYL
Sbjct: 142 DEESELTYL 150


>sp|ENDA_HALSA|TRNA-SPLICING endonuclease|Halobacterium salinarum (strain ATCC 700922

Query: 1 DEHSVMTYL 9
DE S +TYL
Sbjct: 144 DEESEITYL 152


>sp|ENDA_HALS3|TRNA-SPLICING endonuclease|Halobacterium salinarum (strain ATCC 29341

Query: 1 DEHSVMTYL 9
DE S +TYL
Sbjct: 144 DEESEITYL 152




47|Sequence|231|240|MTYLSQFPKA

>sp|KAE1B_THEVO|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 MTYLSQFPKA 10
M+Y + FP+A
Sbjct: 501 MSYRANFPQA 510


>sp|NSUN6_PYRHO|TRNA (cytosine(72)-C(5))-methyltransferase|Pyrococcus horikoshii

Query: 1 MTYLSQFPK 9
M YL FPK
Sbjct: 3 MNYLEAFPK 11


>sp|SYS_SACS2|SERINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 YLSQFPKA 10
YL FPKA
Sbjct: 437 YLEAFPKA 444


>sp|SYS_HYPBU|SERINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 3 YLSQFPKA 10
YL FPKA
Sbjct: 440 YLEIFPKA 447


>sp|MALG_THELN|TREHALOSE/MALTOSE transport system permease protein|Thermococcus litoralis (strain

Query: 1 MTYLSQFPK 9
++Y SQ PK
Sbjct: 158 LSYFSQLPK 166


>sp|HPCAS_SULTO|3-HYDROXYPROPIONYL-COENZYME A synthetase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 TYLSQFP 8
TY S+FP
Sbjct: 495 TYFSKFP 501


>sp|SYS_SACI6|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 YLSQFPKA 10
YL FPKA
Sbjct: 437 YLEIFPKA 444


>sp|SYS_SACI4|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 YLSQFPKA 10
YL FPKA
Sbjct: 437 YLEIFPKA 444


>sp|SYS_SACI3|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 YLSQFPKA 10
YL FPKA
Sbjct: 437 YLEIFPKA 444


>sp|SYS_SACI2|SERINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 YLSQFPKA 10
YL FPKA
Sbjct: 437 YLEIFPKA 444


>sp|SYS_SACI1|SERINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 YLSQFPKA 10
YL FPKA
Sbjct: 437 YLEIFPKA 444


>sp|SYS_SACI7|SERINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 YLSQFPKA 10
YL FPKA
Sbjct: 437 YLEIFPKA 444




48|Sequence|236|245|QFPKAKLKPG

>sp|SYE_PICTO|GLUTAMATE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 QFPKAKLKPG 10
+FP+A+ PG
Sbjct: 34 EFPEARKNPG 43


>sp|HMGCS_CALMQ|HYDROXYMETHYLGLUTARYL-COA synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 FPKAKLKPG 10
FP K+KPG
Sbjct: 251 FPLEKVKPG 259


>sp|HMD_METTH|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 FPKAKLKPG 10
FPK ++PG
Sbjct: 145 FPKGDMQPG 153


>sp|HMD_METTW|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanothermobacter thermautotrophicus (strain Winter)

Query: 2 FPKAKLKPG 10
FPK ++PG
Sbjct: 145 FPKGDMQPG 153


>sp|HMD_METTF|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanothermobacter thermautotrophicus

Query: 2 FPKAKLKPG 10
FPK ++PG
Sbjct: 145 FPKGDMQPG 153


>sp|HBCL1_METS5|4-HYDROXYBUTYRATE--COA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 2 FPKAKLKPG 10
FP K+KPG
Sbjct: 357 FPFLKVKPG 365


>sp|TRM56_HYPBU|TRNA (cytidine(56)-2'-O)-methyltransferase|Hyperthermus butylicus

Query: 2 FPKAKLK 8
FP+AKL+
Sbjct: 166 FPRAKLR 172


>sp|HMGCS_THEKO|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 FPKAKLKPG 10
FPK K+ PG
Sbjct: 255 FPKEKVLPG 263


>sp|Y1564_METJA|UPF0201 protein MJ1564|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FPKAKL 7
FPKAKL
Sbjct: 26 FPKAKL 31




49|Sequence|241|250|KLKPGAPLKP

>sp|DPOL_THEFM|DNA polymerase|Thermococcus fumicolans

Query: 1 KLKPGAPLK 9
K+KPG PLK
Sbjct: 998 KVKPGKPLK 1006


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 1 KLKPGAPLK 9
K+KPG PLK
Sbjct: 1142 KVKPGKPLK 1150


>sp|DNLI_METTF|DNA ligase|Methanothermobacter thermautotrophicus (Methanobacterium

Query: 2 LKPGAPLKP 10
L+PG P+KP
Sbjct: 219 LEPGRPVKP 227


>sp|DNLI_METTH|DNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 LKPGAPLKP 10
L+PG P+KP
Sbjct: 219 LEPGRPVKP 227


>sp|DNLI_METS3|DNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 LKPGAPLKP 10
L PG P+KP
Sbjct: 216 LTPGTPVKP 224


>sp|DNLI_METST|DNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 LKPGAPLKP 10
+ PG P+KP
Sbjct: 221 ITPGKPIKP 229


>sp|PUR7_METB6|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanoregula boonei (strain DSM 21154

Query: 2 LKPGAPLKP 10
K G PLKP
Sbjct: 107 FKEGTPLKP 115


>sp|PUR5_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KLKPGAPLKP 10
KLK GA ++P
Sbjct: 156 KLKTGAEIRP 165


>sp|Y1282_METMP|UPF0200 protein MMP1282|Methanococcus maripaludis (strain DSM 14266

Query: 2 LKPGAPLKP 10
LK G PL P
Sbjct: 40 LKQGMPLNP 48


>sp|DNLI1_METAC|DNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LKPGAPLK 9
+KPG P+K
Sbjct: 214 IKPGRPVK 221


>sp|DNLI_ACIAM|DNA ligase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 KLKPGAPLKP 10
K +PG P++P
Sbjct: 227 KPQPGIPIRP 236


>sp|DNLI1_METMA|DNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LKPGAPLK 9
+KPG P+K
Sbjct: 213 IKPGRPVK 220


>sp|TRPE_THEKO|ANTHRANILATE synthase component 1|Thermococcus kodakarensis (strain ATCC

Query: 1 KLKPGAPLK 9
KLKP PLK
Sbjct: 5 KLKPVDPLK 13


>sp|Y886_METJA|PUTATIVE molybdopterin biosynthesis protein MJ0886|Methanocaldococcus

Query: 1 KLKPGAP 7
K+KPG P
Sbjct: 283 KIKPGKP 289


>sp|GGR_METTP|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 KPGAPLK 9
+PGAP+K
Sbjct: 229 EPGAPVK 235


>sp|DNLI_METS5|DNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 4 PGAPLKP 10
PG P++P
Sbjct: 230 PGIPIRP 236


>sp|AGLB1_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KLKPGAPLKP 10
KLK G L+P
Sbjct: 904 KLKEGIKLRP 913


>sp|DNLI_METKA|DNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 LKPGAPLKP 10
L+P P+KP
Sbjct: 217 LRPMRPIKP 225


>sp|HBCL1_METS5|4-HYDROXYBUTYRATE--COA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 1 KLKPGAPLKP 10
K+KPG+ KP
Sbjct: 361 KVKPGSMGKP 370


>sp|NADC_ARCFU|PROBABLE nicotinate-nucleotide pyrophosphorylase

Query: 3 KPGAPLKP 10
K G P+KP
Sbjct: 48 KDGEPIKP 55


>sp|Y1265_ARCFU|UPF0173 metal-dependent hydrolase AF_1265|Archaeoglobus fulgidus (strain

Query: 4 PGAPLKP 10
P AP+KP
Sbjct: 29 PNAPVKP 35


>sp|COFG_METM7|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C7 /

Query: 1 KLKPGAPLK 9
++KPG P++
Sbjct: 236 RVKPGIPME 244


>sp|COBQ_METHJ|PROBABLE cobyric acid synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LKPGAPL 8
+KPG PL
Sbjct: 275 VKPGTPL 281


>sp|IF2P_THESM|PROBABLE translation initiation factor IF-2|Thermococcus sibiricus (strain

Query: 1 KLKPGAPL 8
++KPG PL
Sbjct: 496 RIKPGYPL 503




50|Sequence|246|255|APLKPKLNPK

>sp|CBID_METM5|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanococcus maripaludis (strain C5 /

Query: 2 PLKPKLNPK 10
P KP +NPK
Sbjct: 123 PGKPAINPK 131


>sp|Y1739_ARCFU|UNCHARACTERIZED protein AF_1739|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 KPKLNPK 10
KPKLNP+
Sbjct: 141 KPKLNPQ 147


>sp|NCPP_METAR|PROBABLE inosine/xanthosine triphosphatase|Methanocella arvoryzae (strain

Query: 5 PKLNPK 10
P+LNPK
Sbjct: 163 PRLNPK 168


>sp|HERA_SACS2|DNA double-strand break repair helicase|Saccharolobus solfataricus

Query: 3 LKPKLNP 9
++PKLNP
Sbjct: 192 IEPKLNP 198


>sp|CBID_METM7|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanococcus maripaludis (strain C7 /

Query: 4 KPKLNPK 10
KP +NPK
Sbjct: 124 KPAINPK 130


>sp|HERA_SULAC|DNA double-strand break repair helicase|Sulfolobus acidocaldarius

Query: 3 LKPKLNP 9
++PKLNP
Sbjct: 192 IEPKLNP 198


>sp|DAPAL_PYRAB|UNCHARACTERIZED DapA-like lyase PYRAB12600|Pyrococcus abyssi (strain GE5 /

Query: 2 PLKPKLNP 9
P+KP L P
Sbjct: 262 PIKPVLRP 269


>sp|CBID_METMA|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 KPKLNPK 10
KP +NPK
Sbjct: 144 KPAINPK 150


>sp|TRPF_PYRAR|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 APLKPKLNP 9
APL KLNP
Sbjct: 169 APLVAKLNP 177


>sp|SYA_METJA|ALANINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LKPKLNP 9
+KPK NP
Sbjct: 111 VKPKANP 117


>sp|SFSA_METS3|SUGAR fermentation stimulation protein homolog|Methanobrevibacter

Query: 3 LKPKLNPK 10
LKP NPK
Sbjct: 48 LKPSDNPK 55


>sp|HERA_SULTO|DNA double-strand break repair helicase|Sulfurisphaera tokodaii (strain

Query: 3 LKPKLNP 9
++PK+NP
Sbjct: 191 IEPKINP 197


>sp|CBID_METAC|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 4 KPKLNPK 10
KP +NPK
Sbjct: 144 KPAINPK 150


>sp|CSM4_METJA|CRISPR system Cms protein Csm4|Methanocaldococcus jannaschii (strain

Query: 3 LKPKLNPK 10
LKPK+N K
Sbjct: 6 LKPKINSK 13




51|Sequence|251|260|KLNPKKARAY

>sp|THIC_METMJ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LNPKKARA 9
+NP++ARA
Sbjct: 386 MNPERARA 393


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 KLNPKKARAY 10
KL PKKA Y
Sbjct: 832 KLTPKKAILY 841


>sp|RS6E_METMA|SMALL ribosomal subunit protein eS6|Methanosarcina mazei (strain ATCC

Query: 3 NPKKARAY 10
+PK+ARAY
Sbjct: 10 DPKEARAY 17


>sp|Y2231_ARCFU|UPF0104 membrane protein AF_2231|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KLNPKKARAY 10
K N KKA Y
Sbjct: 181 KFNEKKAEKY 190


>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 3 NPKKARAY 10
+PKK R Y
Sbjct: 547 SPKKGRVY 554


>sp|RS6E_METKA|SMALL ribosomal subunit protein eS6|Methanopyrus kandleri (strain AV19

Query: 3 NPKKARAY 10
+P+KAR+Y
Sbjct: 10 DPEKARSY 17




52|Sequence|256|265|KARAYGRGIE

>sp|IXTPA_KORCO|DITP/XTP pyrophosphatase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 ARAYGRGIE 10
A +YGRGIE
Sbjct: 109 ALSYGRGIE 117


>sp|DP2S_PYRHO|DNA polymerase II small subunit|Pyrococcus horikoshii (strain ATCC

Query: 4 AYGRGIE 10
A+GRGIE
Sbjct: 499 AHGRGIE 505


>sp|PYLC_METAC|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 RAYGRGIE 10
RA+G G+E
Sbjct: 266 RAFGEGVE 273


>sp|DP2S_PYRFU|DNA polymerase II small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 4 AYGRGIE 10
A+GRGIE
Sbjct: 490 AHGRGIE 496


>sp|DP2S_PYRAB|DNA polymerase II small subunit|Pyrococcus abyssi (strain GE5 /

Query: 4 AYGRGIE 10
A+GRGIE
Sbjct: 496 AHGRGIE 502


>sp|ALR_METMP|ALANINE racemase|Methanococcus maripaludis (strain DSM 14266

Query: 1 KARAYGRG 8
KA AYG G
Sbjct: 37 KANAYGHG 44


>sp|HDRA_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 3 RAYGRGIE 10
RA+G+G E
Sbjct: 440 RAFGKGFE 447


>sp|HDRA_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 3 RAYGRGIE 10
RA+G+G E
Sbjct: 439 RAFGKGFE 446


>sp|Y787_METJA|UNCHARACTERIZED protein MJ0787|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ARAYGRGIE 10
A+ YG+G+E
Sbjct: 222 AKKYGKGLE 230


>sp|DAPF_METAR|DIAMINOPIMELATE epimerase|Methanocella arvoryzae (strain DSM 22066

Query: 1 KARAYGRGIE 10
+ R Y RG+E
Sbjct: 205 RVRTYERGVE 214


>sp|TRPC_METTM|INDOLE-3-GLYCEROL phosphate synthase|Methanothermobacter marburgensis (strain ATCC

Query: 2 ARAYGRGI 9
R YGRG+
Sbjct: 63 GRTYGRGL 70


>sp|HDRA1_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 3 RAYGRGIE 10
RA+G+G E
Sbjct: 439 RAFGKGYE 446


>sp|RS14Z_SULTO|SMALL ribosomal subunit protein uS14|Sulfurisphaera tokodaii (strain

Query: 3 RAYGRGIE 10
R YGRG++
Sbjct: 10 RKYGRGVQ 17


>sp|CAS4_THETK|CRISPR-ASSOCIATED exonuclease Cas4|Thermoproteus tenax (strain ATCC 35583

Query: 3 RAYGRGI 9
RAYGR +
Sbjct: 114 RAYGRAV 120


>sp|DNLI_METB6|DNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 KARAYGRGIE 10
KAR Y R +E
Sbjct: 260 KARMYSRRLE 269




53|Sequence|261|270|GRGIEPTGNM

>sp|SYK2_METMA|LYSINE--TRNA ligase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GRGIEPTGNM 10
G G+ PTG M
Sbjct: 472 GYGLPPTGGM 481


>sp|SYK2_METAC|LYSINE--TRNA ligase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GRGIEPTGNM 10
G G+ PTG M
Sbjct: 472 GYGLPPTGGM 481


>sp|SYY_PICTO|TYROSINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 GIEPTGN 9
G EP+GN
Sbjct: 33 GFEPSGN 39


>sp|SYM_METS3|METHIONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 GRGIEPT 7
GR +EPT
Sbjct: 159 GRALEPT 165


>sp|G3P_HYPBU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Hyperthermus butylicus (strain DSM 5456

Query: 1 GRGIEPTGNM 10
+GIEP G +
Sbjct: 64 AKGIEPAGTI 73


>sp|Y456_METJA|UNCHARACTERIZED transporter MJ0456|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GRGIEPTGN 9
G G+ P GN
Sbjct: 127 GSGLTPIGN 135


>sp|Y856_METTH|METALLOPROTEASE MTH_856|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 GIEPTGN 9
G+EP+GN
Sbjct: 320 GLEPSGN 326


>sp|COBQ_METBU|PROBABLE cobyric acid synthase|Methanococcoides burtonii (strain DSM 6242

Query: 3 GIEPTGNM 10
G+EPT +M
Sbjct: 72 GVEPTADM 79


>sp|Y338_HYPBU|UPF0200 protein Hbut_0338|Hyperthermus butylicus (strain DSM 5456

Query: 2 RGIEPT 7
RGIEPT
Sbjct: 47 RGIEPT 52


>sp|PYRF_ARCFU|OROTIDINE 5'-phosphate decarboxylase|Archaeoglobus fulgidus (strain ATCC

Query: 1 GRGIEPTGN 9
GRGI +GN
Sbjct: 187 GRGIYASGN 195


>sp|Y1508_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 5 EPTGNM 10
EPTGN+
Sbjct: 167 EPTGNL 172


>sp|HBCL2_METS5|4-HYDROXYBUTYRATE--COA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 3 GIEPTGN 9
G++PTG+
Sbjct: 11 GVDPTGS 17


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 GIEPTGNM 10
GI+PTG +
Sbjct: 799 GIDPTGYL 806




54|Sequence|266|275|PTGNMVKQPA

>sp|PRIL_METBF|DNA primase large subunit PriL|Methanosarcina barkeri (strain Fusaro /

Query: 2 TGNMVKQPA 10
TGN+ K PA
Sbjct: 292 TGNVYKPPA 300


>sp|QUEC2_SULTO|7-CYANO-7-DEAZAGUANINE synthase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PTGNMVKQ 8
P GN+VK
Sbjct: 400 PVGNLVKH 407


>sp|HERA_SULTO|DNA double-strand break repair helicase|Sulfurisphaera tokodaii (strain

Query: 3 GNMVKQPA 10
GN+V+ PA
Sbjct: 448 GNIVRMPA 455


>sp|QUEC_SULAC|7-CYANO-7-DEAZAGUANINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PTGNMVKQ 8
P GN+VK
Sbjct: 402 PVGNLVKH 409


>sp|QUEC_SACS2|7-CYANO-7-DEAZAGUANINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PTGNMVKQ 8
P GN+VK
Sbjct: 403 PVGNLVKH 410


>sp|ILVD_METBF|DIHYDROXY-ACID dehydratase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PTGNMVKQPA 10
P G++VKQ A
Sbjct: 384 PNGSVVKQAA 393


>sp|PGK_SACS2|PHOSPHOGLYCERATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 GNMVKQPA 10
GN++++PA
Sbjct: 286 GNVIEEPA 293


>sp|PRIL_METMA|DNA primase large subunit PriL|Methanosarcina mazei (strain ATCC

Query: 2 TGNMVKQPA 10
TGN K PA
Sbjct: 292 TGNTYKPPA 300


>sp|ILVD_METBU|DIHYDROXY-ACID dehydratase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PTGNMVKQPA 10
P G++VKQ A
Sbjct: 384 PDGSVVKQSA 393




55|Sequence|271|280|VKQPAKFTVD

>sp|COFC_METB6|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanoregula boonei (strain DSM 21154

Query: 1 VKQPAKFTVD 10
V++PAKF VD
Sbjct: 126 VREPAKFHVD 135


>sp|ALAXM_PYRHO|ALANYL-TRNA editing protein AlaX-M|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VKQPAKFTV 9
VK+P KF V
Sbjct: 71 VKEPEKFKV 79


>sp|Y076_METFV|UNCHARACTERIZED protein Mfer_0076|Methanothermus fervidus (strain ATCC 43054

Query: 1 VKQPAKFTVD 10
VK+P K T+D
Sbjct: 114 VKRPYKITID 123


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 KQPAKFTVD 10
++P K+TVD
Sbjct: 851 QRPLKYTVD 859


>sp|RS13_METTH|SMALL ribosomal subunit protein uS13|Methanothermobacter

Query: 1 VKQPAKFTV 9
+K PAK+ +
Sbjct: 67 IKNPAKYNI 75


>sp|Y1050_PYRFU|UPF0127 protein PF1050|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KQPAKFTVD 10
K+PAK+ V+
Sbjct: 85 KRPAKYIVE 93




56|Sequence|276|285|KFTVDTISAG

>sp|KCY_METBU|CYTIDYLATE kinase|Methanococcoides burtonii (strain DSM 6242

Query: 2 FTVDTISAG 10
++VD ISAG
Sbjct: 24 YSVDIISAG 32


>sp|EF2_METJA|ELONGATION factor 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KFTVDTISAG 10
+ VD+ISAG
Sbjct: 346 RIPVDSISAG 355




57|Sequence|281|290|TISAGQGDVM

>sp|CAPPA_PYRHO|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 GQGDVM 10
GQGDVM
Sbjct: 454 GQGDVM 459


>sp|PRIS_PYRNV|DNA primase small subunit PriS|Pyrobaculum neutrophilum (strain DSM

Query: 2 ISAGQGDV 9
I AG+GDV
Sbjct: 284 IDAGEGDV 291


>sp|G1PDH_METVS|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcus vannielii (strain ATCC 35089

Query: 2 ISAGQGDVM 10
+SAG GD++
Sbjct: 141 LSAGMGDIV 149


>sp|G1PDH_METJA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanocaldococcus jannaschii (strain ATCC

Query: 2 ISAGQGDVM 10
+SAG GD++
Sbjct: 142 LSAGMGDIV 150


>sp|G1PDH_METM6|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcus maripaludis (strain C6 /

Query: 2 ISAGQGDVM 10
+SAG GD++
Sbjct: 141 LSAGMGDIV 149


>sp|DPCKG_SACS2|GTP-DEPENDENT dephospho-CoA kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TISAGQGDVM 10
T+SA GD++
Sbjct: 136 TLSANHGDIV 145


>sp|G1PDH_METM5|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcus maripaludis (strain C5 /

Query: 2 ISAGQGDVM 10
+SAG GD++
Sbjct: 141 LSAGMGDIV 149


>sp|G1PDH_META3|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcus aeolicus (strain ATCC

Query: 2 ISAGQGDVM 10
+SAG GD++
Sbjct: 145 LSAGMGDIV 153


>sp|G1PDH_METMP|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcus maripaludis (strain DSM 14266

Query: 2 ISAGQGDVM 10
+SAG GD++
Sbjct: 141 LSAGMGDIV 149


>sp|RS17_METMJ|SMALL ribosomal subunit protein uS17|Methanoculleus marisnigri (strain

Query: 2 ISAGQGDVM 10
I+AG GDV+
Sbjct: 78 INAGVGDVV 86


>sp|G1PDH_METM7|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcus maripaludis (strain C7 /

Query: 2 ISAGQGDVM 10
+SAG GD++
Sbjct: 141 LSAGMGDIV 149


>sp|DPCKG_SACI7|GTP-DEPENDENT dephospho-CoA kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 TISAGQGDVM 10
T+SA GD++
Sbjct: 135 TLSADNGDIV 144


>sp|DPCKG_SACI2|GTP-DEPENDENT dephospho-CoA kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 TISAGQGDVM 10
T+SA GD++
Sbjct: 135 TLSADNGDIV 144


>sp|DPCKG_SACI1|GTP-DEPENDENT dephospho-CoA kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 TISAGQGDVM 10
T+SA GD++
Sbjct: 135 TLSADNGDIV 144




58|Sequence|286|295|QGDVMVFVED

>sp|GUAAA_IGNH4|GMP synthase [glutamine-hydrolyzing] subunit A|Ignicoccus hospitalis

Query: 2 GDVMVFVED 10
GDV +FV+D
Sbjct: 102 GDVTIFVDD 110


>sp|Y579_METJA|UNCHARACTERIZED protein MJ0579|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GDVMVFVED 10
GD ++F+ED
Sbjct: 90 GDKLIFIED 98


>sp|THS_METTL|CHAPERONIN subunit|Methanothermococcus thermolithotrophicus

Query: 2 GDVMVFVED 10
GD M+FVE+
Sbjct: 352 GDAMIFVEE 360


>sp|THS_METKA|THERMOSOME subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 GDVMVFVE 9
GD M+FVE
Sbjct: 359 GDKMIFVE 366


>sp|GCH1_CALMQ|GTP cyclohydrolase 1|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 GDVMVFVE 9
GDVMV E
Sbjct: 132 GDVMVLTE 139


>sp|THS_METMP|CHAPERONIN subunit|Methanococcus maripaludis (strain DSM 14266

Query: 2 GDVMVFVED 10
GD M+FVE+
Sbjct: 350 GDSMIFVEE 358


>sp|GLGA_METJA|PROBABLE glycogen synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QGDVMVFVE 9
+G+VM F+E
Sbjct: 161 KGEVMTFLE 169


>sp|THS_METJA|THERMOSOME subunit|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GDVMVFVE 9
GD M+FVE
Sbjct: 354 GDAMIFVE 361


>sp|PURP_SULTO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Sulfurisphaera tokodaii (strain DSM

Query: 1 QGDVMVF 7
QGD++VF
Sbjct: 275 QGDIVVF 281


>sp|DPH2_METJA|2-(3-AMINO-3-CARBOXYPROPYL)HISTIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QGDVMVFV 8
+GDV++FV
Sbjct: 179 EGDVILFV 186


>sp|PSA_HALSA|PROTEASOME subunit alpha|Halobacterium salinarum (strain ATCC 700922

Query: 1 QGDVMVFVED 10
+GD+ F+ED
Sbjct: 171 RGDIQEFLED 180


>sp|PSA_HALS3|PROTEASOME subunit alpha|Halobacterium salinarum (strain ATCC 29341

Query: 1 QGDVMVFVED 10
+GD+ F+ED
Sbjct: 171 RGDIQEFLED 180


>sp|GGGPS_METTP|GERANYLGERANYLGLYCERYL phosphate synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 GDVMVFVED 10
GDV FV+D
Sbjct: 240 GDVFRFVKD 248


>sp|ACDG_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit gamma|Archaeoglobus fulgidus

Query: 2 GDVMVF 7
GDVM+F
Sbjct: 310 GDVMIF 315


>sp|IF2P_PYRAR|PROBABLE translation initiation factor IF-2|Pyrobaculum arsenaticum (strain

Query: 1 QGDVMV 6
QGDVMV
Sbjct: 537 QGDVMV 542


>sp|IF2P_PYRNV|PROBABLE translation initiation factor IF-2|Pyrobaculum neutrophilum (strain

Query: 1 QGDVMV 6
QGDVMV
Sbjct: 536 QGDVMV 541




59|Sequence|291|300|VFVEDPEGNK

>sp|GLMS_SULAC|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Sulfolobus acidocaldarius (strain

Query: 1 VFVEDPEGN 9
VF+ED +GN
Sbjct: 223 VFIEDKDGN 231


>sp|G1PDH_THEPD|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermofilum pendens (strain DSM 2475

Query: 1 VFVEDPEGN 9
V ++DPEGN
Sbjct: 124 VALKDPEGN 132


>sp|RTCB_PYRFU|TRNA-SPLICING ligase RtcB|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VFVEDPEGN 9
VF +DPEG+
Sbjct: 799 VFRQDPEGD 807


>sp|TDXH_METTM|PEROXIREDOXIN marburgensis (strain ATCC BAA-927

Query: 1 VFVEDPEG 8
VFV DPEG
Sbjct: 121 VFVVDPEG 128


>sp|SAT_CENSY|SULFATE adenylyltransferase|Cenarchaeum symbiosum (strain A)

Query: 1 VFVEDPEGNK 10
V +EDP G+K
Sbjct: 95 VLLEDPSGSK 104


>sp|RS3_NATPD|SMALL ribosomal subunit protein uS3|Natronomonas pharaonis (strain ATCC

Query: 2 FVEDPEGN 9
FVE+PEG+
Sbjct: 204 FVEEPEGD 211


>sp|RTCB_PYRHO|TRNA-SPLICING ligase RtcB|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VFVEDPEGN 9
VF +DPEG+
Sbjct: 700 VFKQDPEGD 708


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VFVEDPEGNK 10
++ EDPEG K
Sbjct: 656 LYGEDPEGRK 665


>sp|TDXH_METTH|PEROXIREDOXIN thermautotrophicus (strain ATCC 29096

Query: 1 VFVEDPEG 8
VFV DPEG
Sbjct: 121 VFVVDPEG 128


>sp|HDRA1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina acetivorans

Query: 1 VFVEDPEGN 9
+FVEDP N
Sbjct: 737 LFVEDPPDN 745


>sp|TDXH_IGNH4|PEROXIREDOXIN hospitalis (strain KIN4/I /

Query: 1 VFVEDPEGN 9
VF+ DPEG
Sbjct: 126 VFIVDPEGK 134


>sp|SEPS_METHJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 VFVEDPEGN 9
V+VE+PE N
Sbjct: 407 VYVEEPEEN 415


>sp|TDXH_NANEQ|PEROXIREDOXIN equitans (strain Kin4-M)

Query: 1 VFVEDPEG 8
VF+ DPEG
Sbjct: 122 VFIVDPEG 129


>sp|TOP6B_METS5|TYPE 2 DNA topoisomerase 6|Metallosphaera sedula (strain ATCC 51363

Query: 2 FVEDPEGN 9
+ +DPEGN
Sbjct: 204 YFKDPEGN 211


>sp|SYA_THEAC|ALANINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VFVEDPEGN 9
+F DPEGN
Sbjct: 851 LFNADPEGN 859


>sp|DAPAT_METST|LL-DIAMINOPIMELATE aminotransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 VFVEDPEGNK 10
V+V+D GNK
Sbjct: 268 VYVKDANGNK 277


>sp|LYSZ_SACI7|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 VFVEDPEG 8
VFV PEG
Sbjct: 51 VFVTSPEG 58


>sp|LYSZ_SACI6|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 VFVEDPEG 8
VFV PEG
Sbjct: 51 VFVTSPEG 58


>sp|LYSZ_SACI4|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 VFVEDPEG 8
VFV PEG
Sbjct: 51 VFVTSPEG 58


>sp|LYSZ_SACI3|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 VFVEDPEG 8
VFV PEG
Sbjct: 51 VFVTSPEG 58


>sp|LYSZ_SACI2|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 VFVEDPEG 8
VFV PEG
Sbjct: 51 VFVTSPEG 58


>sp|LYSZ_SACI1|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 VFVEDPEG 8
VFV PEG
Sbjct: 51 VFVTSPEG 58


>sp|AGAL_SACS2|ALPHA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 1 VFVEDPEGNK 10
+++ED GNK
Sbjct: 2 IWIEDENGNK 11


>sp|PCKG_THEAC|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 VEDPEGNK 10
VEDP G K
Sbjct: 242 VEDPHGRK 249


>sp|Y2322_SULTO|UPF0282 protein STK_23220|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VFVEDPEGN 9
VF++DP N
Sbjct: 95 VFIKDPTNN 103


>sp|SLAA_METS5|S-LAYER protein A|Metallosphaera sedula (strain ATCC 51363

Query: 1 VFVEDPEGNK 10
+ VE+P G K
Sbjct: 713 IIVENPAGQK 722


>sp|Y1508_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 VFVEDPEGN 9
+F ++P GN
Sbjct: 163 IFADEPTGN 171


>sp|LYSZ_SULTO|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VFVEDPEG 8
VFV PEG
Sbjct: 51 VFVTSPEG 58


>sp|AMYA_METJA|PUTATIVE alpha-amylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VFVEDPEGNK 10
+++ED EG K
Sbjct: 445 IYIEDEEGKK 454


>sp|VHUU_METVO|F420-NON-REDUCING hydrogenase vhu subunit U|Methanococcus voltae

Query: 1 VFVEDPEGN 9
+ VED EGN
Sbjct: 27 MIVEDAEGN 35


>sp|RS8E_METS3|SMALL ribosomal subunit protein eS8|Methanobrevibacter smithii (strain

Query: 3 VEDPEGN 9
VE PEGN
Sbjct: 101 VETPEGN 107


>sp|LYSZ_SACS2|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VFVEDPEG 8
VFV PEG
Sbjct: 51 VFVTSPEG 58


>sp|RS4E_DESA1|SMALL ribosomal subunit protein eS4|Desulfurococcus amylolyticus (strain

Query: 1 VFVEDPEGNK 10
V +ED +GNK
Sbjct: 218 VTLEDKQGNK 227


>sp|NTPTH_METTH|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 VFVEDPE 7
VFV DPE
Sbjct: 148 VFVVDPE 154


>sp|MPNS_NITMS|METHYLPHOSPHONATE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 FVEDPEGNK 10
+ +DPEG K
Sbjct: 163 YYKDPEGKK 171


>sp|GLMS_SULTO|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Sulfurisphaera tokodaii (strain DSM

Query: 1 VFVEDPEGN 9
V++ED +GN
Sbjct: 223 VYLEDKDGN 231


>sp|TRM1_SACS2|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus solfataricus

Query: 1 VFVEDPEG 8
+FV DP G
Sbjct: 13 IFVPDPTG 20


>sp|SURE_CALMQ|5'-NUCLEOTIDASE SurE|Caldivirga maquilingensis (strain ATCC 700844

Query: 5 DPEGNK 10
DP GNK
Sbjct: 207 DPRGNK 212


>sp|RS4E_METKA|SMALL ribosomal subunit protein eS4|Methanopyrus kandleri (strain AV19 /

Query: 1 VFVEDPEGNK 10
+ VE+PEG++
Sbjct: 227 ITVENPEGDQ 236


>sp|TOP6B_SACI7|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 EDPEGN 9
+DPEGN
Sbjct: 206 KDPEGN 211


>sp|TOP6B_SACI6|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.16.4 /

Query: 4 EDPEGN 9
+DPEGN
Sbjct: 206 KDPEGN 211


>sp|TOP6B_SACI4|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.14.25 /

Query: 4 EDPEGN 9
+DPEGN
Sbjct: 206 KDPEGN 211


>sp|TOP6B_SACI3|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.16.27)

Query: 4 EDPEGN 9
+DPEGN
Sbjct: 206 KDPEGN 211


>sp|TOP6B_SACI2|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 EDPEGN 9
+DPEGN
Sbjct: 206 KDPEGN 211


>sp|TOP6B_SACSH|TYPE 2 DNA topoisomerase 6|Saccharolobus shibatae (strain ATCC 51178

Query: 4 EDPEGN 9
+DPEGN
Sbjct: 206 KDPEGN 211


>sp|TOP6B_SACS2|TYPE 2 DNA topoisomerase 6|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 EDPEGN 9
+DPEGN
Sbjct: 206 KDPEGN 211


>sp|TOP6B_SACI1|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 EDPEGN 9
+DPEGN
Sbjct: 206 KDPEGN 211


>sp|AGOG_METMP|N-GLYCOSYLASE/DNA lyase|Methanococcus maripaludis (strain DSM 14266

Query: 2 FVEDPEGNK 10
F+E+ +GNK
Sbjct: 95 FLENSKGNK 103


>sp|MTNA_AERPE|PUTATIVE methylthioribose-1-phosphate isomerase|Aeropyrum pernix (strain

Query: 1 VFVEDPEGN 9
++VED GN
Sbjct: 149 IYVEDVRGN 157


>sp|SYY_HALSA|TYROSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 FVEDPEGNK 10
EDPEG +
Sbjct: 23 LAEDPEGKR 31


>sp|SYY_HALS3|TYROSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 FVEDPEGNK 10
EDPEG +
Sbjct: 23 LAEDPEGKR 31


>sp|GADH_PICTO|D-GLYCERALDEHYDE dehydrogenase (NADP(+))|Picrophilus torridus (strain ATCC 700027

Query: 1 VFVEDPE 7
+F EDPE
Sbjct: 411 LFTEDPE 417


>sp|RS4E_STAMF|SMALL ribosomal subunit protein eS4|Staphylothermus marinus (strain ATCC

Query: 1 VFVEDPEGNK 10
V +ED GNK
Sbjct: 218 VTIEDKHGNK 227


>sp|DNAG_THEVO|DNA primase DnaG|Thermoplasma volcanium (strain ATCC 51530

Query: 3 VEDPEGN 9
++DP+GN
Sbjct: 390 IQDPQGN 396


>sp|TDXH_STAMF|PEROXIREDOXIN marinus (strain ATCC 43588

Query: 1 VFVEDPEG 8
VFV DP G
Sbjct: 126 VFVIDPNG 133




60|Sequence|296|305|PEGNKEEAQV

>sp|Y1341_METJA|UNCHARACTERIZED protein MJ1341|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EGNKEEAQV 10
EGNKEE ++
Sbjct: 17 EGNKEEVEM 25


>sp|HUTI_THEVO|IMIDAZOLONEPROPIONASE volcanium (strain ATCC 51530

Query: 1 PEGNKEEA 8
PEG EEA
Sbjct: 177 PEGESEEA 184


>sp|Y952_PYRAE|UPF0215 protein PAE0952|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PEGNKEEA 8
PEG EEA
Sbjct: 95 PEGRVEEA 102


>sp|TRPB1_AERPE|TRYPTOPHAN synthase beta chain 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 PEGNKEEAQV 10
PEG +EE+++
Sbjct: 25 PEGLREESRI 34


>sp|Y119_PYRCJ|UPF0215 protein Pcal_0119|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 PEGNKEEA 8
PEG EEA
Sbjct: 95 PEGRVEEA 102


>sp|Y148_PYRAR|UPF0215 protein Pars_0148|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PEGNKEEA 8
PEG EEA
Sbjct: 95 PEGRVEEA 102


>sp|Y1557_ARCFU|UNCHARACTERIZED protein AF_1557|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PEGNKEE 7
PEG KEE
Sbjct: 148 PEGKKEE 154




61|Sequence|301|310|EEAQVTPDSD

>sp|HMDH_PYRHO|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 AQVTPDSD 10
A+VTPD D
Sbjct: 326 AEVTPDGD 333


>sp|PHAP_HALMT|PHA granule-associated protein PhaP|Haloferax mediterranei (strain ATCC

Query: 3 AQVTPDS 9
AQVTPD+
Sbjct: 146 AQVTPDT 152


>sp|LEUC_SULAC|3-ISOPROPYLMALATE dehydratase large subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 1 EEAQVTPDSD 10
E VTPDSD
Sbjct: 242 EPQMVTPDSD 251


>sp|TOP6B_METBU|TYPE 2 DNA topoisomerase 6|Methanococcoides burtonii (strain DSM 6242

Query: 1 EEAQVTPD 8
EEA++ PD
Sbjct: 54 EEAEILPD 61




62|Sequence|306|315|TPDSDKNKTY

>sp|CCA_NANEQ|CCA-ADDING enzyme|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 TPDSDKNKTY 10
T D DKNK+Y
Sbjct: 311 TIDFDKNKSY 320


>sp|Y1058_METJA|UNCHARACTERIZED protein MJ1058|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TPDSDKNKT 9
TP+SD+ KT
Sbjct: 245 TPNSDEGKT 253


>sp|TMG10_METJA|TRNA (guanine(10)-N2)-dimethyltransferase|Methanocaldococcus jannaschii

Query: 2 PDSDKNKTY 10
PD D++K+Y
Sbjct: 96 PDIDESKSY 104


>sp|RS17E_METPE|SMALL ribosomal subunit protein eS17|Methanosphaerula palustris (strain

Query: 1 TPDSDKNK 8
TPD D+NK
Sbjct: 24 TPDFDENK 31


>sp|MTMC2_METBA|MONOMETHYLAMINE corrinoid protein 2|Methanosarcina barkeri

Query: 1 TPDSDKNK 8
TP+ +KNK
Sbjct: 80 TPELEKNK 87


>sp|MTMC1_METBA|MONOMETHYLAMINE corrinoid protein 1|Methanosarcina barkeri

Query: 1 TPDSDKNK 8
TP+ +KNK
Sbjct: 80 TPELEKNK 87


>sp|PTH_HALWD|PEPTIDYL-TRNA hydrolase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 PDSDKN 7
PDSD+N
Sbjct: 96 PDSDEN 101




63|Sequence|311|320|KNKTYSVEYL

>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KNKTYSVEYL 10
K +TY EYL
Sbjct: 561 KGRTYDREYL 570


>sp|PCNA_NITMS|DNA polymerase sliding clamp|Nitrosopumilus maritimus (strain SCM1)

Query: 4 TYSVEYL 10
TYS+EYL
Sbjct: 196 TYSLEYL 202


>sp|PCNA_CENSY|DNA polymerase sliding clamp|Cenarchaeum symbiosum (strain A)

Query: 4 TYSVEYL 10
TYS+EYL
Sbjct: 196 TYSLEYL 202


>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 NKTYSVEYL 10
+KT S+EYL
Sbjct: 147 DKTDSIEYL 155


>sp|UPPS_METMA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Methanosarcina

Query: 1 KNKTYSVEY 9
KN+T+SV Y
Sbjct: 2 KNRTFSVFY 10


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 KNKTYSVE 8
KN+ Y+VE
Sbjct: 881 KNRVYNVE 888


>sp|RL22_THEAC|LARGE ribosomal subunit protein uL22|Thermoplasma acidophilum (strain

Query: 2 NKTYSVEYL 10
NKTY++ Y
Sbjct: 54 NKTYAIPYF 62


>sp|APT_METVS|ADENINE phosphoribosyltransferase|Methanococcus vannielii (strain ATCC

Query: 3 KTYSVEY 9
KT+SV+Y
Sbjct: 86 KTFSVDY 92


>sp|EF2_METST|ELONGATION factor 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 NKTYSVEYL 10
NKT ++YL
Sbjct: 546 NKTRGIQYL 554




64|Sequence|316|325|SVEYLPKVTG

>sp|MOAA_HALWD|PROBABLE GTP 3',8-cyclase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 VEYLPKVTG 10
+EY+P++TG
Sbjct: 188 IEYMPELTG 196


>sp|Y1470_METJA|UNCHARACTERIZED protein MJ1470|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 YLPKVTG 10
Y+PK+TG
Sbjct: 173 YIPKITG 179


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 1 SVEYLPKVTG 10
S +YLP TG
Sbjct: 846 SKKYLPSTTG 855


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 1 SVEYLPKVTG 10
S YLP TG
Sbjct: 852 SARYLPSTTG 861


>sp|RL15_THEKO|LARGE ribosomal subunit protein uL15|Thermococcus kodakarensis (strain

Query: 1 SVEYLPKV 8
+V+Y+PKV
Sbjct: 68 AVQYIPKV 75


>sp|TRUB_THEGJ|PROBABLE tRNA pseudouridine synthase B|Thermococcus gammatolerans (strain

Query: 1 SVEYLPKV 8
+VE+LPKV
Sbjct: 246 AVEHLPKV 253


>sp|LYSY_SULTO|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 SVEYLPKV 8
S+EY+PK+
Sbjct: 81 SLEYVPKI 88


>sp|Y1757_ARCFU|UNCHARACTERIZED protein AF_1757|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SVEYLP 6
SVEYLP
Sbjct: 89 SVEYLP 94


>sp|MFNA_HALMA|PROBABLE L-aspartate decarboxylase|Haloarcula marismortui (strain ATCC

Query: 1 SVEYLPKVTG 10
+VEYL +TG
Sbjct: 53 AVEYLGDITG 62


>sp|HISX_SULTO|HISTIDINOL dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 EYLPKV 8
EYLPKV
Sbjct: 305 EYLPKV 310


>sp|TRUB_THEKO|PROBABLE tRNA pseudouridine synthase B|Thermococcus kodakarensis (strain

Query: 1 SVEYLPKV 8
+VE+LPKV
Sbjct: 246 AVEHLPKV 253


>sp|TRUB_PYRFU|PROBABLE tRNA pseudouridine synthase B|Pyrococcus furiosus (strain ATCC

Query: 1 SVEYLPKV 8
+VE+LPKV
Sbjct: 246 AVEHLPKV 253


>sp|TRUB_THEON|PROBABLE tRNA pseudouridine synthase B|Thermococcus onnurineus (strain NA1)

Query: 1 SVEYLPKV 8
+VE+LPKV
Sbjct: 246 AVEHLPKV 253


>sp|DPHB_AERPE|DIPHTHINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 SVEYLPKVTG 10
+V Y+P V+G
Sbjct: 113 AVRYIPGVSG 122


>sp|Y3528_METJA|UNCHARACTERIZED protein MJECL28|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EYLPKVTG 10
EYL K TG
Sbjct: 897 EYLEKTTG 904


>sp|TRUB_PYRAB|PROBABLE tRNA pseudouridine synthase B|Pyrococcus abyssi (strain GE5 /

Query: 1 SVEYLPKV 8
+VE+LPK+
Sbjct: 246 AVEHLPKI 253


>sp|TRUB_PYRHO|PROBABLE tRNA pseudouridine synthase B|Pyrococcus horikoshii (strain ATCC

Query: 1 SVEYLPKV 8
+VE+LPK+
Sbjct: 246 AVEHLPKI 253


>sp|QUEFL_PYRCJ|ARCHAEOSINE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 SVEYLPK 7
SVEY+P+
Sbjct: 33 SVEYIPR 39


>sp|THRC_METJA|THREONINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VEYLPKVTG 10
++ LPK+TG
Sbjct: 254 IDELPKMTG 262


>sp|LYSY_SULAC|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SVEYLPKV 8
SV+Y+PK+
Sbjct: 81 SVDYVPKL 88


>sp|SECY_ARCFU|PROTEIN translocase subunit SecY|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 YLPKVT 9
Y+PKVT
Sbjct: 426 YIPKVT 431




65|Sequence|321|330|PKVTGLHKVT

>sp|TRPD_NITMS|ANTHRANILATE phosphoribosyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 PKVTGLHK 8
P+V GLHK
Sbjct: 251 PEVVGLHK 258


>sp|SYS2_METTH|TYPE-2 serine--tRNA ligase|Methanothermobacter thermautotrophicus (strain

Query: 1 PKVTGLHK 8
PK+T LH+
Sbjct: 217 PKITALHR 224


>sp|LEU3_ARCFU|3-ISOPROPYLMALATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KVTGLHK 8
KVT LHK
Sbjct: 159 KVTALHK 165


>sp|PRIS_THEAC|DNA primase small subunit PriS|Thermoplasma acidophilum (strain ATCC

Query: 1 PKVTGLHKV 9
PK+ G H+V
Sbjct: 297 PKMPGKHRV 305


>sp|KAE1B_METVS|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 PKVTGLH 7
PK+ G+H
Sbjct: 40 PKIQGIH 46


>sp|GGGPS_METLZ|GERANYLGERANYLGLYCERYL phosphate synthase|Methanocorpusculum labreanum (strain ATCC

Query: 3 VTGLHK 8
+TGLHK
Sbjct: 93 ITGLHK 98


>sp|TRUB_METAC|PROBABLE tRNA pseudouridine synthase B|Methanosarcina acetivorans (strain

Query: 1 PKVTGL 6
PKVTGL
Sbjct: 79 PKVTGL 84


>sp|TRUB_METBF|PROBABLE tRNA pseudouridine synthase B|Methanosarcina barkeri (strain

Query: 1 PKVTGL 6
PKVTGL
Sbjct: 79 PKVTGL 84


>sp|TRUB_METMA|PROBABLE tRNA pseudouridine synthase B|Methanosarcina mazei (strain ATCC

Query: 1 PKVTGL 6
PKVTGL
Sbjct: 79 PKVTGL 84




66|Sequence|326|335|LHKVTVLFAG

>sp|ACDA2_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 HKVTVLFAG 10
HKV +FAG
Sbjct: 595 HKVAAIFAG 603


>sp|CATA_METBF|CATALASE barkeri (strain Fusaro /

Query: 1 LHKVTVLFA 9
+H+VT+LF+
Sbjct: 176 IHQVTILFS 184


>sp|ACSA_METSH|ACETYL-COENZYME A synthetase|Methanothrix soehngenii (Methanosaeta concilii)

Query: 2 HKVTVLFAG 10
HKVTVL+
Sbjct: 373 HKVTVLYTA 381


>sp|THSB_AERPE|THERMOSOME subunit beta|Aeropyrum pernix (strain ATCC 700893

Query: 3 KVTVLFAG 10
K TV+FAG
Sbjct: 105 KTTVIFAG 112


>sp|ASPD_METAC|L-ASPARTATE dehydrogenase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LHKVTVLFAG 10
L K TVLF G
Sbjct: 169 LEKKTVLFEG 178


>sp|ASPD_METMA|L-ASPARTATE dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LHKVTVLFAG 10
L K T+LF G
Sbjct: 169 LEKETILFEG 178




67|Sequence|331|340|VLFAGQHISK

>sp|DTDA_METTP|D-AMINOACYL-TRNA deacylase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 VLFAGQHISK 10
++FA +HISK
Sbjct: 69 IIFASRHISK 78


>sp|PYRF_HALSA|OROTIDINE 5'-phosphate decarboxylase|Halobacterium salinarum (strain ATCC

Query: 1 VLFAGQHIS 9
V+FAG+H S
Sbjct: 238 VIFAGEHGS 246


>sp|PYRF_HALS3|OROTIDINE 5'-phosphate decarboxylase|Halobacterium salinarum (strain ATCC

Query: 1 VLFAGQHIS 9
V+FAG+H S
Sbjct: 238 VIFAGEHGS 246


>sp|DTDA_THEGJ|D-AMINOACYL-TRNA deacylase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 VLFAGQHISK 10
++FA +H SK
Sbjct: 74 IVFASRHASK 83




68|Sequence|336|345|QHISKSPFEV

>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 QHISKSPF 8
QH S SPF
Sbjct: 711 QHTSSSPF 718


>sp|HIS8_SACS2|HISTIDINOL-PHOSPHATE aminotransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 HISKSPFE 9
H+++SPFE
Sbjct: 52 HLNESPFE 59


>sp|MTMB2_METBA|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri

Query: 3 ISKSPFEV 10
I KSP+EV
Sbjct: 170 IPKSPYEV 177


>sp|MTMB1_METBA|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri

Query: 3 ISKSPFEV 10
I KSP+EV
Sbjct: 170 IPKSPYEV 177


>sp|AATA_PYRIL|A-TYPE ATP synthase subunit A|Pyrobaculum islandicum (strain DSM 4184

Query: 1 QHISKSPF 8
+ ISKSPF
Sbjct: 93 EEISKSPF 100


>sp|AATA_PYRNV|A-TYPE ATP synthase subunit A|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 QHISKSPF 8
+ ISKSPF
Sbjct: 93 EEISKSPF 100


>sp|AATA_PYRCJ|A-TYPE ATP synthase subunit A|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 QHISKSPF 8
+ ISKSPF
Sbjct: 93 ESISKSPF 100


>sp|MTMB3_METBF|MONOMETHYLAMINE methyltransferase MtmB3|Methanosarcina barkeri (strain Fusaro /

Query: 3 ISKSPFEV 10
+ KSP+EV
Sbjct: 170 VPKSPYEV 177


>sp|MTMB2_METBF|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri (strain Fusaro /

Query: 3 ISKSPFEV 10
+ KSP+EV
Sbjct: 170 VPKSPYEV 177


>sp|MTMB2_METAC|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina acetivorans (strain ATCC

Query: 3 ISKSPFEV 10
+ KSP+EV
Sbjct: 170 VPKSPYEV 177


>sp|MTMB1_METBF|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri (strain Fusaro /

Query: 3 ISKSPFEV 10
+ KSP+EV
Sbjct: 170 VPKSPYEV 177


>sp|MTMB1_METAC|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina acetivorans (strain ATCC

Query: 3 ISKSPFEV 10
+ KSP+EV
Sbjct: 170 VPKSPYEV 177


>sp|Y1062_METJA|UNCHARACTERIZED protein MJ1062|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HISKSPFEV 10
HI K FE+
Sbjct: 307 HIGKGKFEI 315


>sp|SYT_NITMS|THREONINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 QHISKSP 7
QH+SK P
Sbjct: 611 QHLSKRP 617


>sp|LHRC_SACS2|ATP-DEPENDENT helicase Lhr-Core|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 HISKSPFEV 10
HI K+P +V
Sbjct: 412 HIPKNPLDV 420




69|Sequence|341|350|SPFEVSVDKA

>sp|COFH_METKA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanopyrus kandleri (strain AV19 /

Query: 1 SPFEVSVDK 9
SP EVSVD+
Sbjct: 4 SPDEVSVDE 12


>sp|UPP_METTH|URACIL phosphoribosyltransferase|Methanothermobacter thermautotrophicus

Query: 2 PFEVSVD 8
PF VS+D
Sbjct: 114 PFRVSID 120


>sp|COOS_METKA|CARBON monoxide dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 SPFEVSVDKA 10
SP+E++ +KA
Sbjct: 116 SPYEIADEKA 125




70|Sequence|346|355|SVDKAQGDAS

>sp|AATI_METJA|A-TYPE ATP synthase subunit I|Methanocaldococcus jannaschii (strain ATCC

Query: 1 SVDKAQGDA 9
S++KA+GDA
Sbjct: 287 SIEKARGDA 295


>sp|PNCB_METBU|NICOTINATE phosphoribosyltransferase|Methanococcoides burtonii (strain DSM

Query: 1 SVDKAQGD 8
SV+KA GD
Sbjct: 378 SVEKATGD 385




71|Sequence|351|360|QGDASKVTAK

>sp|SYS2_METVS|TYPE-2 serine--tRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 QGDASKVTA 9
+GDASK+ +
Sbjct: 42 EGDASKIES 50


>sp|FENR2_SULAC|FERREDOXIN--NADP reductase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 QGDASKVT 8
+GD SKVT
Sbjct: 212 KGDGSKVT 219


>sp|FENR1_SULAC|FERREDOXIN--NADP reductase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 QGDASKVT 8
+GD SKVT
Sbjct: 207 KGDGSKVT 214




72|Sequence|356|365|KVTAKGPGLE

>sp|PSTOM_PYRAB|STOMATIN homolog PYRAB06580|Pyrococcus abyssi (strain GE5 /

Query: 2 VTAKGPGL 9
V A+GPGL
Sbjct: 43 VGARGPGL 50


>sp|Y1420_ARCFU|UNCHARACTERIZED protein AF_1420|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VTAKGPGL 9
V A+GPGL
Sbjct: 38 VGARGPGL 45


>sp|KAE1B_METST|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 4 AKGPGL 9
AKGPGL
Sbjct: 76 AKGPGL 81


>sp|GCSPA_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 4 AKGPGLE 10
AKGPG+E
Sbjct: 176 AKGPGVE 182


>sp|PSTOM_PYRHO|STOMATIN homolog PH1511|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VTAKGPGL 9
V A+GPGL
Sbjct: 43 VGARGPGL 50


>sp|ENDA_HYPBU|TRNA-SPLICING endonuclease|Hyperthermus butylicus (strain DSM 5456

Query: 2 VTAKGPGLE 10
V +GPGLE
Sbjct: 117 VYERGPGLE 125


>sp|RL6_HYPBU|LARGE ribosomal subunit protein uL6|Hyperthermus butylicus (strain DSM

Query: 1 KVTAKGP 7
KVT KGP
Sbjct: 25 KVTVKGP 31


>sp|THIM_METLZ|HYDROXYETHYLTHIAZOLE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 TAKGPG 8
TAKGPG
Sbjct: 231 TAKGPG 236


>sp|IF2P_METMA|PROBABLE translation initiation factor IF-2|Methanosarcina mazei (strain

Query: 1 KVTAKGPGL 9
+ +AKGPG+
Sbjct: 227 QYSAKGPGV 235


>sp|IF2P_METBF|PROBABLE translation initiation factor IF-2|Methanosarcina barkeri (strain

Query: 3 TAKGPGL 9
+AKGPG+
Sbjct: 229 SAKGPGV 235


>sp|GAL1_PYRFU|GALACTOKINASE furiosus (strain ATCC 43587

Query: 1 KVTAKGPG 8
K+T K PG
Sbjct: 3 KITVKSPG 10




73|Sequence|361|370|GPGLEAVGNI

>sp|TRUA_PYRAE|TRNA pseudouridine synthase A|Pyrobaculum aerophilum (strain ATCC

Query: 2 PGLEAVGNI 10
PG+ AVGN+
Sbjct: 44 PGVSAVGNV 52


>sp|TRUA_PYRNV|TRNA pseudouridine synthase A|Pyrobaculum neutrophilum (strain DSM

Query: 2 PGLEAVGNI 10
PG+ AVGN+
Sbjct: 44 PGVSAVGNV 52


>sp|SYL1_SULTO|LEUCINE--TRNA ligase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PGLEAVG 8
PG+EAVG
Sbjct: 347 PGVEAVG 353


>sp|RL6_HALMA|LARGE ribosomal subunit protein uL6|Haloarcula marismortui (strain ATCC

Query: 1 GPGLEAVG 8
GP +EAVG
Sbjct: 136 GPDIEAVG 143


>sp|PURP_IGNH4|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 GLEAVGN 9
GLEA+GN
Sbjct: 174 GLEALGN 180


>sp|SURE2_PYRAE|5'-NUCLEOTIDASE SurE 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 GLEAVGN 9
GLEAVGN
Sbjct: 22 GLEAVGN 28


>sp|TRUA_PYRCJ|TRNA pseudouridine synthase A|Pyrobaculum calidifontis (strain DSM

Query: 2 PGLEAVGN 9
PG+ AVGN
Sbjct: 44 PGVSAVGN 51


>sp|MTD_METST|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosphaera

Query: 1 GPGLEAVGNI 10
GPG A+G++
Sbjct: 95 GPGERAIGSM 104


>sp|GUAAA_METTH|GMP synthase [glutamine-hydrolyzing] subunit A|Methanothermobacter

Query: 1 GPGLEAVGN 9
GP LE GN
Sbjct: 53 GPSLERSGN 61


>sp|GUAAA_METS3|GMP synthase [glutamine-hydrolyzing] subunit A|Methanobrevibacter

Query: 1 GPGLEAVGN 9
GP +E GN
Sbjct: 52 GPSIEGAGN 60


>sp|GUAAA_METST|GMP synthase [glutamine-hydrolyzing] subunit A|Methanosphaera

Query: 1 GPGLEAVGN 9
GP +E +GN
Sbjct: 52 GPSIERIGN 60


>sp|RL11_ARCFU|LARGE ribosomal subunit protein uL11|Archaeoglobus fulgidus (strain

Query: 2 PGLEAVGNI 10
PG E VGN+
Sbjct: 88 PGREVVGNL 96


>sp|PFDA_THEAC|PREFOLDIN subunit alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GPGLEAVGNI 10
G GL A GNI
Sbjct: 56 GSGLFAKGNI 65


>sp|SURE_HALSA|5'-NUCLEOTIDASE SurE|Halobacterium salinarum (strain ATCC 700922

Query: 3 GLEAVGNI 10
GL+AVGN+
Sbjct: 27 GLDAVGNV 34


>sp|SURE_HALS3|5'-NUCLEOTIDASE SurE|Halobacterium salinarum (strain ATCC 29341

Query: 3 GLEAVGNI 10
GL+AVGN+
Sbjct: 27 GLDAVGNV 34


>sp|RL6_SACS2|LARGE ribosomal subunit protein uL6|Saccharolobus solfataricus (strain

Query: 1 GPGLEAVG 8
GP LEAV
Sbjct: 141 GPNLEAVA 148


>sp|GUAAA_PYRFU|GMP synthase [glutamine-hydrolyzing] subunit A|Pyrococcus furiosus

Query: 1 GPGLEAVGN 9
GP LE GN
Sbjct: 51 GPSLENTGN 59


>sp|GUAAA_PYRHO|GMP synthase [glutamine-hydrolyzing] subunit A|Pyrococcus horikoshii

Query: 1 GPGLEAVGN 9
GP LE GN
Sbjct: 52 GPSLENTGN 60


>sp|GUAAA_PYRAB|GMP synthase [glutamine-hydrolyzing] subunit A|Pyrococcus abyssi

Query: 1 GPGLEAVGN 9
GP LE GN
Sbjct: 51 GPSLENTGN 59


>sp|FENR_METS5|FERREDOXIN--NADP reductase|Metallosphaera sedula (strain ATCC 51363

Query: 2 PGLEAVGNI 10
PG+ AVG+I
Sbjct: 275 PGVYAVGDI 283




74|Sequence|366|375|AVGNIANKPT

>sp|RFCL_METKA|REPLICATION factor C large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 AVGNIANKP 9
A+G I NKP
Sbjct: 249 ALGRIFNKP 257


>sp|SECY_HALSA|PROTEIN translocase subunit SecY|Halobacterium salinarum (strain ATCC

Query: 2 VGNIANKP 9
VGN++N P
Sbjct: 222 VGNVSNMP 229


>sp|KAD6_METS5|PUTATIVE adenylate kinase|Metallosphaera sedula (strain ATCC 51363

Query: 2 VGNIANKP 9
+GNI +KP
Sbjct: 153 LGNICDKP 160


>sp|DNAG_PICTO|DNA primase DnaG|Picrophilus torridus (strain ATCC 700027

Query: 2 VGNIANKP 9
+GNI KP
Sbjct: 411 IGNITKKP 418


>sp|PYRG_METB6|CTP synthase|Methanoregula boonei (strain DSM 21154

Query: 1 AVGNIANKPT 10
A+G++ KPT
Sbjct: 186 AMGDLKTKPT 195


>sp|CPGS_THEKO|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus kodakarensis (strain

Query: 3 GNIANKP 9
GN++N+P
Sbjct: 357 GNLSNRP 363




75|Sequence|371|380|ANKPTYFDIY

>sp|PYRE_STAMF|OROTATE phosphoribosyltransferase|Staphylothermus marinus (strain ATCC

Query: 4 PTYFDIY 10
P+Y+DIY
Sbjct: 43 PSYYDIY 49


>sp|CBID_METST|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 ANKPTYFDIY 10
ANK T DIY
Sbjct: 304 ANKKTLHDIY 313


>sp|AROD_PYRFU|3-DEHYDROQUINATE dehydratase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 KPTYFDI 9
KP YFD+
Sbjct: 82 KPAYFDV 88


>sp|SYR_SACS2|ARGININE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ANKPTYFDI 9
ANKP FD+
Sbjct: 487 ANKPLSFDL 495


>sp|SECY_HALSA|PROTEIN translocase subunit SecY|Halobacterium salinarum (strain ATCC

Query: 4 PTYFDI 9
PT+FDI
Sbjct: 215 PTWFDI 220


>sp|PURL_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanocaldococcus jannaschii (strain ATCC

Query: 2 NKPTYFDIY 10
N P+Y D Y
Sbjct: 84 NHPSYIDPY 92


>sp|PURL_META3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanococcus aeolicus (strain ATCC

Query: 2 NKPTYFDIY 10
N P+Y D Y
Sbjct: 84 NHPSYIDPY 92


>sp|SYR_SULTO|ARGININE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ANKPTYFDI 9
ANKP F+I
Sbjct: 485 ANKPVSFNI 493


>sp|DHE_HALSI|GLUTAMATE dehydrogenase A2|Halobacterium salinarum (Halobacterium halobium)

Query: 1 ANKPTYFD 8
AN PT FD
Sbjct: 315 ANGPTTFD 322


>sp|DHE_HALSA|GLUTAMATE dehydrogenase A2|Halobacterium salinarum (strain ATCC 700922

Query: 1 ANKPTYFD 8
AN PT FD
Sbjct: 315 ANGPTTFD 322


>sp|MTNA_AERPE|PUTATIVE methylthioribose-1-phosphate isomerase|Aeropyrum pernix (strain

Query: 3 KPTYFD 8
KP YFD
Sbjct: 22 KPLYFD 27


>sp|FOLCP_HALSA|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 4 PTYFDI 9
PTYF++
Sbjct: 117 PTYFEV 122


>sp|LYSY_IGNH4|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 ANKPTYF 7
ANKP Y+
Sbjct: 39 ANKPVYY 45


>sp|ACSA_PYRAE|ACETYL-COENZYME A synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 KPTYFDIY 10
K TY+D+Y
Sbjct: 120 KLTYYDLY 127


>sp|MALQ_THELN|4-ALPHA-GLUCANOTRANSFERASE litoralis (strain ATCC 51850

Query: 2 NKPTYFDI 9
NKP Y D+
Sbjct: 61 NKPDYLDL 68


>sp|COMB_THEAC|PROBABLE 2-phosphosulfolactate phosphatase|Thermoplasma acidophilum

Query: 3 KPTYFD 8
KP YFD
Sbjct: 69 KPPYFD 74


>sp|AMYA_PYRAB|ALPHA-AMYLASE abyssi (strain GE5 /

Query: 2 NKPTYFDI 9
NKP Y D+
Sbjct: 61 NKPDYIDL 68


>sp|OFOB_SULSP|2-OXOACID:FERREDOXIN oxidoreductase subunit beta|Sulfolobus sp

Query: 1 ANKPTYFD 8
AN P Y D
Sbjct: 270 ANSPAYLD 277


>sp|OFOB1_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit beta|Sulfurisphaera tokodaii (strain DSM

Query: 1 ANKPTYFD 8
AN P Y D
Sbjct: 270 ANSPAYLD 277




76|Sequence|376|385|YFDIYTAGAG

>sp|ARGDC_AERPE|ARGININE decarboxylase proenzyme|Aeropyrum pernix (strain ATCC 700893

Query: 2 FDIYTAG 8
FDIYT G
Sbjct: 85 FDIYTCG 91


>sp|RTCA_HYPBU|RNA 3'-terminal phosphate cyclase|Hyperthermus butylicus (strain DSM

Query: 1 YFDIYTAGA 9
YF+I TAG+
Sbjct: 86 YFNIGTAGS 94


>sp|SECY_METJA|PROTEIN translocase subunit SecY|Methanocaldococcus jannaschii (strain

Query: 3 DIYTAGA 9
D+YTAGA
Sbjct: 44 DVYTAGA 50


>sp|EF2_THEAC|ELONGATION factor 2|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 DIYTAGAG 10
D+Y +GAG
Sbjct: 323 DLYISGAG 330


>sp|DPHB_THEVO|DIPHTHINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YFDIYTA 7
Y DIYT+
Sbjct: 30 YLDIYTS 36


>sp|PYRB_HALMA|ASPARTATE carbamoyltransferase catalytic subunit|Haloarcula marismortui

Query: 2 FDIYTAGAG 10
+D++ AGAG
Sbjct: 195 YDLHEAGAG 203


>sp|LIPB2_PICTO|PROBABLE octanoyltransferase 2|Picrophilus torridus (strain ATCC 700027

Query: 3 DIYTAG 8
D+YTAG
Sbjct: 70 DVYTAG 75


>sp|GGR1_METKA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 1|Methanopyrus kandleri (strain AV19 /

Query: 2 FDIYTAGAG 10
FD+ GAG
Sbjct: 3 FDVVVVGAG 11


>sp|FDHD_METJA|PROTEIN FdhD|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FDIYTAG 8
F+IYT+G
Sbjct: 216 FNIYTSG 222


>sp|GGR2_METKA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanopyrus kandleri (strain AV19 /

Query: 2 FDIYTAGAG 10
FD+ GAG
Sbjct: 3 FDVVVVGAG 11




77|Sequence|381|390|TAGAGVGDIG

>sp|DNLI1_METBF|DNA ligase 1|Methanosarcina barkeri (strain Fusaro /

Query: 1 TAGAGVGDIG 10
TAG G GD G
Sbjct: 505 TAGQGEGDTG 514


>sp|TRM56_THEVO|TRNA (cytidine(56)-2'-O)-methyltransferase|Thermoplasma volcanium

Query: 1 TAGAGVGDIG 10
TAGA + DIG
Sbjct: 214 TAGALLHDIG 223


>sp|VORB_METTM|KETOISOVALERATE oxidoreductase subunit VorB|Methanothermobacter marburgensis

Query: 2 AGAGVGDIG 10
AG G+G+IG
Sbjct: 107 AGPGLGNIG 115


>sp|VORB_METTH|KETOISOVALERATE oxidoreductase subunit VorB|Methanothermobacter thermautotrophicus

Query: 2 AGAGVGDIG 10
AG G+G+IG
Sbjct: 107 AGPGLGNIG 115


>sp|COFG_METB6|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanoregula boonei (strain DSM 21154

Query: 3 GAGVGDIG 10
G GV D+G
Sbjct: 253 GCGVSDLG 260




78|Sequence|386|395|VGDIGVEVED

>sp|HPRL2_HALJB|HGPRTASE-LIKE protein 2|Halalkalicoccus jeotgali (strain DSM 18796

Query: 1 VGDIGVEVED 10
+GDIG EVED
Sbjct: 137 LGDIGAEVED 146


>sp|Y1548_METJA|PUTATIVE RNase MJ1548|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VGDIGVEVED 10
V DIG+ VED
Sbjct: 27 VKDIGLNVED 36


>sp|PRIL_METAC|DNA primase large subunit PriL|Methanosarcina acetivorans (strain

Query: 1 VGDIGVEVE 9
VGD+G+ +E
Sbjct: 19 VGDLGISLE 27


>sp|DAPB_ARCFU|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VGDIGVEVED 10
VG IGV +ED
Sbjct: 46 VGKIGVPIED 55


>sp|DNLI_METM7|DNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 GDIGVEVED 10
GDIG+ VE+
Sbjct: 91 GDIGIAVEN 99


>sp|DNLI_METM6|DNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 GDIGVEVED 10
GDIG+ VE+
Sbjct: 91 GDIGIAVEN 99


>sp|NDK_PYRHO|NUCLEOSIDE diphosphate kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GDIGVEVED 10
GD G+EV D
Sbjct: 106 GDFGLEVSD 114


>sp|DNLI_METVS|DNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 GDIGVEVE 9
GDIG+ VE
Sbjct: 91 GDIGISVE 98


>sp|SYT_HALSA|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VGDIGVEVED 10
+GD VEVED
Sbjct: 561 LGDYRVEVED 570


>sp|SYT_HALS3|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 VGDIGVEVED 10
+GD VEVED
Sbjct: 561 LGDYRVEVED 570


>sp|Y1183_METJA|UNCHARACTERIZED protein MJ1183|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VGDIGVEVED 10
+ DIG+++ED
Sbjct: 76 IKDIGMQMED 85


>sp|DNLI_METB6|DNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 GDIGVEVED 10
GD+G VED
Sbjct: 88 GDVGRAVED 96


>sp|TAW22_NANEQ|TRNA (guanine(37)-N(1))/4-demethylwyosine(37)-methyltransferase

Query: 1 VGDIGV 6
VGDIGV
Sbjct: 280 VGDIGV 285


>sp|DAPB_METMA|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VGDIGVEVED 10
VG++G+++ D
Sbjct: 48 VGNLGIQISD 57


>sp|KPYK_METJA|PYRUVATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GDIGVEV 8
GD+GVEV
Sbjct: 226 GDLGVEV 232


>sp|Y826_METJA|UNCHARACTERIZED protein MJ0826|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VGDIGVEVED 10
VG IG+ +ED
Sbjct: 81 VGMIGIAIED 90


>sp|MPTA_THEAC|GTP cyclohydrolase MptA|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VGDIGVEVED 10
+GDIG+ + D
Sbjct: 76 IGDIGIAICD 85


>sp|Y1582_METJA|UNCHARACTERIZED metal-dependent hydrolase MJ1582|Methanocaldococcus jannaschii

Query: 1 VGDIGVEVED 10
+G+IG++++D
Sbjct: 93 IGEIGMDIKD 102




79|Sequence|391|400|VEVEDPQGKN

>sp|PCKG_THEVO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma volcanium (strain ATCC 51530

Query: 1 VEVEDPQGKN 10
+EV+DPQGK+
Sbjct: 240 LEVKDPQGKS 249


>sp|PCKG_THEAC|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VEVEDPQGK 9
+EVEDP G+
Sbjct: 240 LEVEDPHGR 248


>sp|AATB_METST|A-TYPE ATP synthase subunit B|Methanosphaera stadtmanae (strain ATCC

Query: 1 VEVEDPQGKN 10
VE+E P G+N
Sbjct: 36 VEIETPAGEN 45


>sp|DPCKG_METM5|GTP-DEPENDENT dephospho-CoA kinase|Methanococcus maripaludis (strain C5 /

Query: 2 EVEDPQG 8
EVE+PQG
Sbjct: 74 EVENPQG 80


>sp|DPCKG_METM7|GTP-DEPENDENT dephospho-CoA kinase|Methanococcus maripaludis (strain C7 /

Query: 2 EVEDPQG 8
EVE+PQG
Sbjct: 74 EVENPQG 80


>sp|NOP10_ARCFU|RIBOSOME biogenesis protein Nop10|Archaeoglobus fulgidus (strain ATCC

Query: 3 VEDPQGK 9
+EDP GK
Sbjct: 37 IEDPYGK 43


>sp|DPCKG_METM6|GTP-DEPENDENT dephospho-CoA kinase|Methanococcus maripaludis (strain C6 /

Query: 2 EVEDPQG 8
EVE+PQG
Sbjct: 74 EVENPQG 80


>sp|DPCKG_METMP|GTP-DEPENDENT dephospho-CoA kinase|Methanococcus maripaludis (strain DSM 14266

Query: 2 EVEDPQG 8
EVE+PQG
Sbjct: 74 EVENPQG 80


>sp|KPRS_AERPE|RIBOSE-PHOSPHATE pyrophosphokinase|Aeropyrum pernix (strain ATCC 700893

Query: 5 DPQGKN 10
DP+GKN
Sbjct: 216 DPRGKN 221


>sp|UPP_PYRIL|URACIL phosphoribosyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 VEVEDPQGK 9
VEVE P GK
Sbjct: 52 VEVETPLGK 60


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 VEVEDPQGK 9
+E+E P+GK
Sbjct: 38 IEIEGPKGK 46


>sp|COAD_PYRAE|PHOSPHOPANTETHEINE adenylyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VEVEDPQG 8
VE+ DP G
Sbjct: 79 VEIHDPYG 86


>sp|KDGK_THETE|2-DEHYDRO-3-DEOXYGLUCONOKINASE tenax

Query: 1 VEVEDPQG 8
V VEDP G
Sbjct: 262 VAVEDPTG 269


>sp|RL6_SULTO|LARGE ribosomal subunit protein uL6|Sulfurisphaera tokodaii (strain DSM

Query: 2 EVEDPQGKN 10
E+E PQG N
Sbjct: 9 EIEIPQGIN 17


>sp|UPP_PYRAE|URACIL phosphoribosyltransferase|Pyrobaculum aerophilum (strain ATCC

Query: 1 VEVEDPQGK 9
VE+E P GK
Sbjct: 52 VEIETPLGK 60


>sp|AATB_HALVD|A-TYPE ATP synthase subunit B|Haloferax volcanii (strain ATCC 29605

Query: 1 VEVEDPQGK 9
VE+E PQG+
Sbjct: 29 VEIETPQGE 37


>sp|UPP_PYRAR|URACIL phosphoribosyltransferase|Pyrobaculum arsenaticum (strain DSM

Query: 1 VEVEDPQGK 9
VEVE P G+
Sbjct: 52 VEVETPLGR 60


>sp|KDGK_SACS2|2-DEHYDRO-3-DEOXYGLUCONOKINASE/2-DEHYDRO-3-DEOXYGALACTONOKINASE solfataricus (strain ATCC 35092

Query: 1 VEVEDPQG 8
V VEDP G
Sbjct: 248 VPVEDPTG 255


>sp|RS3_METTH|SMALL ribosomal subunit protein uS3|Methanothermobacter

Query: 1 VEVEDPQ 7
VE+EDP+
Sbjct: 192 VEIEDPR 198


>sp|SYY_HALSA|TYROSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 VEDPQGKN 10
EDP+GK
Sbjct: 24 AEDPEGKR 31


>sp|SYY_HALS3|TYROSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 3 VEDPQGKN 10
EDP+GK
Sbjct: 24 AEDPEGKR 31




80|Sequence|396|405|PQGKNTVELL

>sp|RNP3_METBU|RIBONUCLEASE P protein component 3|Methanococcoides burtonii (strain DSM 6242

Query: 1 PQGKNTVELL 10
P GKNT E L
Sbjct: 15 PDGKNTAEEL 24


>sp|KPRS_METTH|RIBOSE-PHOSPHATE pyrophosphokinase|Methanothermobacter thermautotrophicus (strain

Query: 1 PQGKNTVELL 10
PQ +N +ELL
Sbjct: 57 PQDENLMELL 66


>sp|KPRS_METS3|RIBOSE-PHOSPHATE pyrophosphokinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 PQGKNTVELL 10
PQ +N +ELL
Sbjct: 57 PQDENLMELL 66


>sp|Y1438_METS3|MEMO1 family protein Msm_1438|Methanobrevibacter smithii (strain ATCC

Query: 3 GKNTVELL 10
GKNT E+L
Sbjct: 251 GKNTSEIL 258


>sp|Y539_PYRAB|MEMO1 family protein PYRAB05390|Pyrococcus abyssi (strain GE5 /

Query: 1 PQGKNTVELL 10
P+G+ VE+L
Sbjct: 13 PEGETLVEML 22


>sp|SYL1_SACS2|LEUCINE--TRNA ligase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 KNTVELL 10
KNT+ELL
Sbjct: 407 KNTIELL 413


>sp|NADK_METB6|NAD kinase|Methanoregula boonei (strain DSM 21154

Query: 3 GKNTVEL 9
G+NTVEL
Sbjct: 229 GQNTVEL 235


>sp|RNP3_METBF|RIBONUCLEASE P protein component 3|Methanosarcina barkeri (strain Fusaro /

Query: 1 PQGKNTVELL 10
P G+NTV+ L
Sbjct: 15 PDGENTVDQL 24


>sp|COBQ_PYRFU|PROBABLE cobyric acid synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PQGKNTVELL 10
P KNTVE L
Sbjct: 290 PGSKNTVEDL 299


>sp|KPRS_SULTO|RIBOSE-PHOSPHATE pyrophosphokinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PQGKNTVELL 10
PQ K+ VELL
Sbjct: 59 PQDKHFVELL 68


>sp|COBQ_THEKO|PROBABLE cobyric acid synthase|Thermococcus kodakarensis (strain ATCC

Query: 1 PQGKNTVELL 10
P KNTVE L
Sbjct: 290 PGSKNTVEDL 299


>sp|PELO_CALMQ|PROTEIN pelota homolog|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 QGKNTVEL 9
+GKN VEL
Sbjct: 7 EGKNYVEL 14


>sp|COBQ_THEON|PROBABLE cobyric acid synthase|Thermococcus onnurineus (strain NA1)

Query: 1 PQGKNTVELL 10
P KNTVE L
Sbjct: 290 PGSKNTVEDL 299


>sp|COBQ_THEGJ|PROBABLE cobyric acid synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 PQGKNTVELL 10
P KNTVE L
Sbjct: 290 PGSKNTVEDL 299


>sp|IF2G_THEKO|TRANSLATION initiation factor 2 subunit|Thermococcus kodakarensis (strain ATCC

Query: 3 GKNTVEL 9
GK+TVEL
Sbjct: 370 GKDTVEL 376


>sp|Y361_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0361|Methanocaldococcus

Query: 1 PQGKNTVELL 10
P+GK +E+L
Sbjct: 72 PRGKRALEIL 81




81|Sequence|401|410|TVELLVEDKG

>sp|PCCA_HALMT|PROPIONYL-COA carboxylase, biotin carboxylase and|Haloferax mediterranei (strain

Query: 1 TVELLVED 8
TVE LVED
Sbjct: 273 TVEFLVED 280


>sp|GATB_META3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus aeolicus (strain ATCC

Query: 2 VELLVEDKG 10
+E++VE+KG
Sbjct: 383 IEIMVENKG 391


>sp|Y345_METJA|UNCHARACTERIZED protein MJ0345|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TVELLVEDK 9
TVEL+ E+K
Sbjct: 110 TVELITEEK 118


>sp|GLKA_PYRAB|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 TVELLVEDK 9
ELLVED+
Sbjct: 85 AAELLVEDR 93




82|Sequence|406|415|VEDKGNQVYR

>sp|Y760_METJA|UNCHARACTERIZED protein MJ0760|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VEDKGNQVYR 10
VEDKG+ YR
Sbjct: 129 VEDKGDGTYR 138


>sp|VHCA_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit A|Archaeoglobus profundus (strain

Query: 1 VEDKGNQVYR 10
++ KGN+V+R
Sbjct: 248 IDTKGNEVFR 257


>sp|SURE_AERPE|5'-NUCLEOTIDASE SurE|Aeropyrum pernix (strain ATCC 700893

Query: 4 KGNQVYR 10
+GN+VYR
Sbjct: 51 RGNRVYR 57


>sp|AROA_METMP|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain DSM

Query: 4 KGNQVYR 10
KGNQ Y+
Sbjct: 224 KGNQTYK 230


>sp|LONB_METJA|ARCHAEAL Lon protease|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EDKGNQVY 9
+DK N+VY
Sbjct: 409 KDKSNKVY 416




83|Sequence|411|420|NQVYRCVYKP

>sp|GFPS_METMA|GERANYLFARNESYL diphosphate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NQVYRCVYK 9
N ++C+YK
Sbjct: 165 NDYFKCIYK 173


>sp|AROC_SULAC|CHORISMATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 VYRCVYKP 10
V RC +KP
Sbjct: 296 VLRCAFKP 303


>sp|APE1_SULTO|PROBABLE aminopeptidase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 YRCVYKP 10
YR +YKP
Sbjct: 494 YRVLYKP 500


>sp|Y418_METJA|UNCHARACTERIZED protein MJ0418|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NQVYRCVY 8
NQ+Y+C +
Sbjct: 42 NQMYKCAW 49


>sp|AROC_SACS2|CHORISMATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 VYRCVYKP 10
+ RC +KP
Sbjct: 295 IVRCAFKP 302


>sp|AROC_SACI7|CHORISMATE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 VYRCVYKP 10
+ RC +KP
Sbjct: 295 IVRCAFKP 302


>sp|AROC_SACI6|CHORISMATE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 VYRCVYKP 10
+ RC +KP
Sbjct: 295 IVRCAFKP 302


>sp|AROC_SACI4|CHORISMATE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 VYRCVYKP 10
+ RC +KP
Sbjct: 295 IVRCAFKP 302


>sp|AROC_SACI3|CHORISMATE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 VYRCVYKP 10
+ RC +KP
Sbjct: 295 IVRCAFKP 302


>sp|AROC_SACI2|CHORISMATE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 VYRCVYKP 10
+ RC +KP
Sbjct: 295 IVRCAFKP 302


>sp|AROC_SACI1|CHORISMATE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 VYRCVYKP 10
+ RC +KP
Sbjct: 295 IVRCAFKP 302


>sp|AROC_METS5|CHORISMATE synthase|Metallosphaera sedula (strain ATCC 51363

Query: 3 VYRCVYKP 10
V RC +KP
Sbjct: 294 VVRCSFKP 301


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 NQVYRCV 7
++VYRC+
Sbjct: 465 DKVYRCI 471


>sp|G1PDH_PYRAE|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 QVYRCVYK 9
+VY CV+K
Sbjct: 91 KVYSCVHK 98


>sp|PUS10_ACIS3|TRNA pseudouridine synthase Pus10|Acidilobus saccharovorans (strain DSM

Query: 2 QVYRCV 7
+VYRCV
Sbjct: 299 RVYRCV 304


>sp|PYRI_AERPE|ASPARTATE carbamoyltransferase regulatory chain|Aeropyrum pernix (strain ATCC

Query: 4 YRCVY 8
YRCVY
Sbjct: 139 YRCVY 143


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 NQVYRCVYKP 10
N+V R YKP
Sbjct: 193 NKVARLQYKP 202


>sp|DFX_METTH|DESULFOFERRODOXIN homolog|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 NQVYRC 6
NQ++RC
Sbjct: 5 NQIFRC 10


>sp|Y085_ARCFU|UNCHARACTERIZED protein AF_0085|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 YRCVYKP 10
Y CVY P
Sbjct: 90 YSCVYPP 96


>sp|Y600_ARCFU|UNCHARACTERIZED protein AF_0600|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NQVYRCVYKP 10
N Y C+Y+P
Sbjct: 25 NPSYLCLYEP 34




84|Sequence|416|425|CVYKPMQPGP

>sp|QOXM_SULAC|QUINOL oxidase subunit 1/3|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 YKPMQPGP 10
+KPMQP P
Sbjct: 572 FKPMQPPP 579


>sp|FPOD_METMA|F(420)H(2) dehydrogenase subunit D|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 PMQPGP 10
PMQPGP
Sbjct: 19 PMQPGP 24


>sp|HPCAS_SULTO|3-HYDROXYPROPIONYL-COENZYME A synthetase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VYKPMQPGP 10
VY PM+ GP
Sbjct: 432 VYLPMKSGP 440


>sp|Y1387_METJA|PUTATIVE nickel insertion protein|Methanocaldococcus jannaschii (strain ATCC

Query: 1 CVYKPMQPG 9
C+YKP+ G
Sbjct: 141 CLYKPINVG 149


>sp|HPCAS_METS5|3-HYDROXYPROPIONYL-COENZYME A synthetase|Metallosphaera sedula (strain ATCC 51363

Query: 2 VYKPMQPGP 10
+Y PM+ GP
Sbjct: 434 IYMPMKSGP 442


>sp|COFC_METHJ|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 YKPMQP 8
YKP+QP
Sbjct: 16 YKPIQP 21


>sp|Y1253_SACS2|PUTATIVE esterase SSO1253|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 KPMQPGP 10
KPM+ GP
Sbjct: 94 KPMKEGP 100


>sp|RL10E_STAMF|LARGE ribosomal subunit protein uL16|Staphylothermus marinus (strain ATCC

Query: 1 CVYKPMQPG 9
V+KP++PG
Sbjct: 162 IVFKPLKPG 170


>sp|COFC_METB6|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanoregula boonei (strain DSM 21154

Query: 2 VYKPMQPGP 10
V +P+QP P
Sbjct: 204 VKRPVQPAP 212


>sp|ILVD_META3|DIHYDROXY-ACID dehydratase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 5 PMQPG 9
PMQPG
Sbjct: 144 PMQPG 148


>sp|RL34_STAMF|LARGE ribosomal subunit protein eL34|Staphylothermus marinus (strain

Query: 3 YKPMQPGP 10
Y+P +PGP
Sbjct: 27 YEPRKPGP 34


>sp|KITH_THEKO|THYMIDINE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 KPMQPG 9
KPM PG
Sbjct: 2 KPMHPG 7


>sp|RS11_THEPD|SMALL ribosomal subunit protein uS11|Thermofilum pendens (strain DSM 2475

Query: 3 YKPMQPGP 10
Y P PGP
Sbjct: 108 YGPKTPGP 115




85|Sequence|421|430|MQPGPHVVKI

>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 1 MQPGPHVV 8
M+P PHV+
Sbjct: 587 MRPAPHVL 594


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 MQPGPHVV 8
M+P PHV+
Sbjct: 584 MKPAPHVL 591


>sp|SPH1_HALSI|SMC-LIKE protein Sph1|Halobacterium salinarum (Halobacterium halobium)

Query: 1 MQPGPHVVK 9
++PGP++V+
Sbjct: 19 LRPGPNIVQ 27


>sp|SPH1_HALSA|SMC-LIKE protein Sph1|Halobacterium salinarum (strain ATCC 700922

Query: 1 MQPGPHVVK 9
++PGP++V+
Sbjct: 19 LRPGPNIVQ 27


>sp|SPH1_HALS3|SMC-LIKE protein Sph1|Halobacterium salinarum (strain ATCC 29341

Query: 1 MQPGPHVVK 9
++PGP++V+
Sbjct: 19 LRPGPNIVQ 27


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 1 MQPGPHVV 8
M+P PHV+
Sbjct: 583 MRPPPHVL 590


>sp|GCH3_AERPE|GTP cyclohydrolase III|Aeropyrum pernix (strain ATCC 700893

Query: 1 MQPGPHVVK 9
+ PGP VVK
Sbjct: 231 INPGPLVVK 239


>sp|SPT5_SULAC|TRANSCRIPTION elongation factor Spt5|Sulfolobus acidocaldarius (strain ATCC

Query: 4 GPHVVKI 10
GPHVVK+
Sbjct: 57 GPHVVKL 63


>sp|SRP54_METBU|SIGNAL recognition particle 54 kDa|Methanococcoides burtonii (strain DSM

Query: 1 MQPGPHVVKI 10
M P HV+KI
Sbjct: 69 MNPREHVIKI 78


>sp|SPT5_ACIAM|TRANSCRIPTION elongation factor Spt5|Acidianus ambivalens (Desulfurolobus

Query: 4 GPHVVKI 10
GPHVVK+
Sbjct: 56 GPHVVKL 62


>sp|G3PP_METJA|GLYCERALDEHYDE 3-phosphate phosphatase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 MQPGPHVVK 9
++P PH +K
Sbjct: 93 LRPYPHTIK 101


>sp|PANB_HALMA|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 MQPGPHVVKI 10
++ GPH V++
Sbjct: 112 LESGPHTVEL 121


>sp|QOXM_SULAC|QUINOL oxidase subunit 1/3|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 MQPGPH 6
MQP PH
Sbjct: 575 MQPPPH 580


>sp|SRP54_METMA|SIGNAL recognition particle 54 kDa|Methanosarcina mazei (strain ATCC

Query: 1 MQPGPHVVKI 10
M P HV++I
Sbjct: 69 MNPREHVIRI 78


>sp|SRP54_METAC|SIGNAL recognition particle 54 kDa|Methanosarcina acetivorans (strain

Query: 1 MQPGPHVVKI 10
M P HV++I
Sbjct: 69 MNPREHVIRI 78


>sp|SRP54_METBF|SIGNAL recognition particle 54 kDa|Methanosarcina barkeri (strain Fusaro

Query: 1 MQPGPHVVKI 10
M P HV++I
Sbjct: 69 MNPREHVIRI 78


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 MQPGPHVV 8
M P PHV+
Sbjct: 704 MSPPPHVL 711


>sp|FPOD_METMA|F(420)H(2) dehydrogenase subunit D|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 MQPGP 5
MQPGP
Sbjct: 20 MQPGP 24


>sp|PANB_HALSA|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 MQPGPHVVKI 10
++ GPH V +
Sbjct: 116 LESGPHTVSL 125


>sp|PANB_HALS3|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 1 MQPGPHVVKI 10
++ GPH V +
Sbjct: 116 LESGPHTVSL 125


>sp|RS4E_METTH|SMALL ribosomal subunit protein eS4|Methanothermobacter

Query: 2 QPGPHVVK 9
PGPH ++
Sbjct: 33 SPGPHAIE 40


>sp|RS4E_THEKO|SMALL ribosomal subunit protein eS4|Thermococcus kodakarensis (strain

Query: 2 QPGPHVVK 9
PGPH +K
Sbjct: 33 SPGPHSMK 40




86|Sequence|426|435|HVVKIFFAGD

>sp|OTC_PYRAE|ORNITHINE carbamoyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 HVVKIFFAGD 10
H VKI F GD
Sbjct: 149 HNVKIAFVGD 158


>sp|AATE_IGNH4|A-TYPE ATP synthase subunit E|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 VVKIFFAGD 10
+VK+ FAGD
Sbjct: 1 MVKVEFAGD 9


>sp|TRM14_METJA|TRNA (guanine(6)-N2)-methyltransferase|Methanocaldococcus jannaschii

Query: 4 KIFFAGD 10
+IFF+GD
Sbjct: 35 RIFFSGD 41


>sp|OTC_PYRIL|ORNITHINE carbamoyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 HVVKIFFAGD 10
H +K+ F GD
Sbjct: 149 HGIKVAFVGD 158


>sp|Y948_PYRAB|UNCHARACTERIZED ATP-binding protein PYRAB09480|Pyrococcus abyssi (strain GE5 /

Query: 2 VVKIFFA 8
VVK+FFA
Sbjct: 280 VVKLFFA 286


>sp|OTC_SACS2|ORNITHINE carbamoyltransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 HVVKIFFAGD 10
++VKI F GD
Sbjct: 150 NLVKIAFVGD 159


>sp|NARC_HALMT|PROBABLE respiratory nitrate reductase subunit|Haloferax mediterranei

Query: 1 HVVKIFFAG 9
H++++FF G
Sbjct: 128 HMLRVFFTG 136


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 3 VKIFFAG 9
+K++FAG
Sbjct: 139 IKVYFAG 145


>sp|Y1314_THEON|UPF0173 metal-dependent hydrolase TON_1314|Thermococcus onnurineus (strain

Query: 3 VKIFFAGD 10
VKI+ AGD
Sbjct: 131 VKIYHAGD 138


>sp|Y1385_PYRHO|IRON-SULFUR cluster assembly SufBD family|Pyrococcus horikoshii (strain ATCC

Query: 1 HVVKIFFAGD 10
H +K+F AG+
Sbjct: 144 HFLKLFKAGE 153


>sp|HTPX1_SULAC|PROTEASE HtpX homolog 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 IFFAGD 10
+FFAGD
Sbjct: 171 LFFAGD 176




87|Sequence|431|440|FFAGDTIPKS

>sp|TMCA2_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 2|Saccharolobus solfataricus

Query: 2 FAGDTIPKS 10
F+G+T+PK+
Sbjct: 178 FSGNTMPKA 186


>sp|KPTA_HALMA|PROBABLE RNA 2'-phosphotransferase|Haloarcula marismortui (strain ATCC

Query: 1 FFAGDTIP 8
FF GDT P
Sbjct: 13 FFEGDTCP 20


>sp|MCAL_HALMA|L-MALYL-COA/BETA-METHYLMALYL-COA lyase|Haloarcula marismortui (strain ATCC 43049

Query: 2 FAGDTIPK 9
FAGD +P+
Sbjct: 70 FAGDILPR 77


>sp|RNZ_METMP|RIBONUCLEASE Z|Methanococcus maripaludis (strain DSM 14266

Query: 2 FAGDTIP 8
++GDTIP
Sbjct: 206 YSGDTIP 212


>sp|RNZ_METM6|RIBONUCLEASE Z|Methanococcus maripaludis (strain C6 /

Query: 2 FAGDTIP 8
++GDTIP
Sbjct: 206 YSGDTIP 212


>sp|Y666_METJA|PUTATIVE molybdopterin biosynthesis protein MJ0666|Methanocaldococcus

Query: 2 FAGDTIPKS 10
F GD +PK+
Sbjct: 100 FTGDKLPKN 108


>sp|RNZ_METM5|RIBONUCLEASE Z|Methanococcus maripaludis (strain C5 /

Query: 2 FAGDTIP 8
++GDTIP
Sbjct: 206 YSGDTIP 212


>sp|RS13_HALWD|SMALL ribosomal subunit protein uS13|Haloquadratum walsbyi (strain DSM

Query: 1 FFAGDTIPKS 10
FF+GDT K+
Sbjct: 98 FFSGDTDHKT 107


>sp|RNZ_METM7|RIBONUCLEASE Z|Methanococcus maripaludis (strain C7 /

Query: 2 FAGDTIP 8
++GDTIP
Sbjct: 206 YSGDTIP 212


>sp|RNZ_METVS|RIBONUCLEASE Z|Methanococcus vannielii (strain ATCC 35089

Query: 2 FAGDTIP 8
++GDTIP
Sbjct: 213 YSGDTIP 219


>sp|RNZ_SACI6|RIBONUCLEASE Z|Saccharolobus islandicus (strain M.16.4 /

Query: 2 FAGDTIP 8
+ GDTIP
Sbjct: 198 YTGDTIP 204


>sp|RNZ_SACI4|RIBONUCLEASE Z|Saccharolobus islandicus (strain M.14.25 /

Query: 2 FAGDTIP 8
+ GDTIP
Sbjct: 198 YTGDTIP 204


>sp|RNZ_SACI3|RIBONUCLEASE Z|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 FAGDTIP 8
+ GDTIP
Sbjct: 198 YTGDTIP 204


>sp|KPRS_METJA|RIBOSE-PHOSPHATE pyrophosphokinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FFAGDTIPK 9
F GD +PK
Sbjct: 137 FIYGDAVPK 145


>sp|RNZ_SACI7|RIBONUCLEASE Z|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 FAGDTIP 8
+ GDTIP
Sbjct: 198 YTGDTIP 204


>sp|RNZ_SACI1|RIBONUCLEASE Z|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 FAGDTIP 8
+ GDTIP
Sbjct: 198 YTGDTIP 204


>sp|RNZ_SACI2|RIBONUCLEASE Z|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 FAGDTIP 8
+ GDTIP
Sbjct: 198 YTGDTIP 204


>sp|HTPX1_SULAC|PROTEASE HtpX homolog 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FFAGDTI 7
FFAGD +
Sbjct: 172 FFAGDEV 178


>sp|GATD_HALSA|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Halobacterium salinarum (strain ATCC

Query: 3 AGDTIP 8
AGDT+P
Sbjct: 384 AGDTLP 389


>sp|GATD_HALS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Halobacterium salinarum (strain ATCC

Query: 3 AGDTIP 8
AGDT+P
Sbjct: 384 AGDTLP 389


>sp|Y1636_METMA|UNCHARACTERIZED glycosyltransferase MM_1636|Methanosarcina mazei (strain ATCC

Query: 2 FAGDTIP 8
F GDT P
Sbjct: 264 FVGDTFP 270


>sp|AGL14_HALVD|PROBABLE low-salt glycan biosynthesis reductase|Haloferax volcanii (strain

Query: 3 AGDTIP 8
AGDT+P
Sbjct: 184 AGDTVP 189


>sp|GATD_HALWD|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Haloquadratum walsbyi (strain DSM 16790

Query: 3 AGDTIP 8
AGDT+P
Sbjct: 400 AGDTLP 405


>sp|RNZ_METJA|RIBONUCLEASE Z|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FAGDTIP 8
++GDT+P
Sbjct: 210 YSGDTLP 216




88|Sequence|436|445|TIPKSPFVVQ

>sp|MTMB2_METBA|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri

Query: 2 IPKSPFVV 9
IPKSP+ V
Sbjct: 170 IPKSPYEV 177


>sp|MTMB1_METBA|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri

Query: 2 IPKSPFVV 9
IPKSP+ V
Sbjct: 170 IPKSPYEV 177


>sp|MTMB3_METBF|MONOMETHYLAMINE methyltransferase MtmB3|Methanosarcina barkeri (strain Fusaro /

Query: 2 IPKSPFVV 9
+PKSP+ V
Sbjct: 170 VPKSPYEV 177


>sp|MTMB2_METBF|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri (strain Fusaro /

Query: 2 IPKSPFVV 9
+PKSP+ V
Sbjct: 170 VPKSPYEV 177


>sp|MTMB1_METBF|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri (strain Fusaro /

Query: 2 IPKSPFVV 9
+PKSP+ V
Sbjct: 170 VPKSPYEV 177


>sp|MTMB1_METAC|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina acetivorans (strain ATCC

Query: 2 IPKSPFVV 9
+PKSP+ V
Sbjct: 170 VPKSPYEV 177


>sp|PDAD_METBU|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanococcoides burtonii (strain DSM 6242

Query: 2 IPKSPFVVQ 10
IPK FVV+
Sbjct: 2 IPKKAFVVK 10


>sp|MTMB2_METAC|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina acetivorans (strain ATCC

Query: 2 IPKSPFVV 9
+PKSP+ V
Sbjct: 170 VPKSPYEV 177


>sp|SYDND_METBU|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 TIPKSPFV 8
++PK+PF+
Sbjct: 278 SVPKTPFM 285


>sp|SYDND_METAC|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 IPKSPFV 8
+PK+PF+
Sbjct: 280 VPKTPFL 286


>sp|SYDND_METMA|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IPKSPFV 8
+PK+PF+
Sbjct: 280 VPKTPFL 286


>sp|SYDND_METBF|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 IPKSPFV 8
+PK+PF+
Sbjct: 280 VPKTPFL 286


>sp|SLAA_SACS2|S-LAYER protein A|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TIPKSPFV 8
T+PK+P V
Sbjct: 578 TLPKTPLV 585


>sp|Y1063_METPE|UPF0173 metal-dependent hydrolase Mpal_1063|Methanosphaerula palustris

Query: 1 TIPKSPFVV 9
TIPK P +V
Sbjct: 29 TIPKDPDLV 37




89|Sequence|441|450|PFVVQVGEAC

>sp|TOP6B_METMA|TYPE 2 DNA topoisomerase 6|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PFVVQVGEA 9
PFVV+VG A
Sbjct: 352 PFVVEVGMA 360


>sp|TOP6B_NATPD|TYPE 2 DNA topoisomerase 6|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PFVVQVGEA 9
PFVV+VG A
Sbjct: 545 PFVVEVGIA 553


>sp|TOP6B_METBU|TYPE 2 DNA topoisomerase 6|Methanococcoides burtonii (strain DSM 6242

Query: 1 PFVVQVGEA 9
PFVV+VG A
Sbjct: 352 PFVVEVGIA 360


>sp|TOP6B_METBF|TYPE 2 DNA topoisomerase 6|Methanosarcina barkeri (strain Fusaro /

Query: 1 PFVVQVGEA 9
PFVV+VG A
Sbjct: 352 PFVVEVGLA 360


>sp|HIS3_PYRAE|PHOSPHORIBOSYL-AMP cyclohydrolase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 VVQVGEAC 10
VVQ+G AC
Sbjct: 99 VVQIGAAC 106


>sp|TOP6B_METAC|TYPE 2 DNA topoisomerase 6|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PFVVQVGEA 9
PFVV+VG A
Sbjct: 352 PFVVEVGLA 360


>sp|TOP6B_METS5|TYPE 2 DNA topoisomerase 6|Metallosphaera sedula (strain ATCC 51363

Query: 1 PFVVQVGEA 9
PF+V+VG A
Sbjct: 349 PFIVEVGLA 357


>sp|TOP6B_AERPE|TYPE 2 DNA topoisomerase 6|Aeropyrum pernix (strain ATCC 700893

Query: 1 PFVVQVGEA 9
PF+V+VG A
Sbjct: 377 PFIVEVGIA 385


>sp|HIS3_PYRCJ|PHOSPHORIBOSYL-AMP cyclohydrolase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 VVQVGEAC 10
VVQ+G AC
Sbjct: 99 VVQIGAAC 106


>sp|SYTE_SACS2|THREONINE--TRNA ligase editing subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 PFVVQVGE 8
PFV+ +GE
Sbjct: 327 PFVIVIGE 334


>sp|SYT_METAR|THREONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 PFVVQVGEA 9
P+VV +G+A
Sbjct: 571 PYVVTIGDA 579


>sp|SPCS_METJA|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PFVVQVGE 8
P VVQ+GE
Sbjct: 63 PNVVQIGE 70


>sp|TRPE_THEKO|ANTHRANILATE synthase component 1|Thermococcus kodakarensis (strain ATCC

Query: 2 FVVQVGEA 9
FVV+VGE
Sbjct: 48 FVVEVGEG 55


>sp|TOP6B_ARCFU|TYPE 2 DNA topoisomerase 6|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PFVVQVGEA 9
PF+V+VG A
Sbjct: 343 PFLVEVGLA 351


>sp|SYT_PYRFU|THREONINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PFVVQVGE 8
P++V VGE
Sbjct: 562 PYIVVVGE 569


>sp|SYT_METPE|THREONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 PFVVQVGEA 9
P+V+ +G+A
Sbjct: 542 PYVIVIGDA 550


>sp|LYSK_PYRAE|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrobaculum aerophilum

Query: 1 PFVVQVGEA 9
P ++Q GEA
Sbjct: 203 PTIIQCGEA 211




90|Sequence|446|455|VGEACNPNAC

>sp|AATB_HALSA|A-TYPE ATP synthase subunit B|Halobacterium salinarum (strain ATCC 700922

Query: 1 VGEACNPNA 9
VGEA NP+A
Sbjct: 110 VGEAINPHA 118


>sp|AATB_HALS3|A-TYPE ATP synthase subunit B|Halobacterium salinarum (strain ATCC 29341

Query: 1 VGEACNPNA 9
VGEA NP+A
Sbjct: 110 VGEAINPHA 118


>sp|Y912_METJA|UNCHARACTERIZED protein MJ0912|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VGEACNPNAC 10
VG NPN C
Sbjct: 41 VGYGANPNEC 50


>sp|THSA_THEK8|CHAPERONIN subunit alpha|Thermococcus sp. (strain KS-8)

Query: 2 GEACNPNAC 10
G C PN C
Sbjct: 533 GAECPPNGC 541


>sp|AATB_HALMA|A-TYPE ATP synthase subunit B|Haloarcula marismortui (strain ATCC 43049

Query: 1 VGEACNP 7
VGEA NP
Sbjct: 110 VGEAINP 116


>sp|DPOL2_SACS2|DNA polymerase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VGEACN 6
+GEACN
Sbjct: 239 LGEACN 244


>sp|ACSA_PYRAR|ACETYL-COENZYME A synthetase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 VGEACNPNA 9
VGE NP A
Sbjct: 401 VGEPINPEA 409


>sp|ACSA_PYRAE|ACETYL-COENZYME A synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VGEACNPNA 9
VGE NP A
Sbjct: 401 VGEPINPEA 409


>sp|ACSA_METSH|ACETYL-COENZYME A synthetase|Methanothrix soehngenii (Methanosaeta concilii)

Query: 1 VGEACNPNA 9
VGE NP A
Sbjct: 410 VGEPINPEA 418


>sp|ACSA_METTP|ACETYL-COENZYME A synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 VGEACNPNA 9
VGE NP A
Sbjct: 399 VGEPLNPEA 407


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VGEACNPN 8
VG+ NPN
Sbjct: 1098 VGDTSNPN 1105


>sp|TSR3_METKA|16S rRNA aminocarboxypropyltransferase|Methanopyrus kandleri (strain

Query: 5 CNPNAC 10
C+P AC
Sbjct: 9 CDPKAC 14


>sp|CHEB1_METAC|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 1|Methanosarcina

Query: 1 VGEACN 6
VG+ACN
Sbjct: 29 VGDACN 34




91|Sequence|451|460|NPNACRASGR

>sp|PYRC_METMA|DIHYDROOROTASE mazei (strain ATCC BAA-159

Query: 2 PNACRASG 9
PNAC AS
Sbjct: 208 PNACEASA 215


>sp|PYRC_METAC|DIHYDROOROTASE acetivorans (strain ATCC 35395

Query: 2 PNACRASG 9
PNAC AS
Sbjct: 208 PNACEASA 215


>sp|SYDND_METJA|ASPARTATE--TRNA(ASP/ASN) ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NPNACRA 7
NPN C+A
Sbjct: 346 NPNICKA 352


>sp|XAD_HALVD|D-XYLONATE dehydratase|Haloferax volcanii (strain ATCC 29605

Query: 1 NPNACRASG 9
NP AC G
Sbjct: 163 NPQACAEEG 171




92|Sequence|456|465|RASGRGLQPK

>sp|CBIA_METTH|COBYRINATE a,c-diamide synthase|Methanothermobacter thermautotrophicus

Query: 3 SGRGLQP 9
SGRG+QP
Sbjct: 26 SGRGVQP 32


>sp|RADB_THEGJ|DNA repair and recombination protein|Thermococcus gammatolerans

Query: 2 ASGRGLQPK 10
AS RGL P+
Sbjct: 66 ASARGLDPE 74


>sp|TRMY_THEON|TRNA (pseudouridine(54)-N(1))-methyltransferase|Thermococcus

Query: 1 RASGRGLQPK 10
R G+G++PK
Sbjct: 67 RFEGQGMKPK 76


>sp|RL18_SACI1|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 1 RASGRGLQPK 10
R GRGL P+
Sbjct: 169 RYLGRGLNPE 178


>sp|RL18_SACI7|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 1 RASGRGLQPK 10
R GRGL P+
Sbjct: 169 RYLGRGLNPE 178


>sp|RL18_SACI6|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 1 RASGRGLQPK 10
R GRGL P+
Sbjct: 169 RYLGRGLNPE 178


>sp|RL18_SACI4|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 1 RASGRGLQPK 10
R GRGL P+
Sbjct: 169 RYLGRGLNPE 178


>sp|RL18_SACI3|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 1 RASGRGLQPK 10
R GRGL P+
Sbjct: 169 RYLGRGLNPE 178


>sp|RL18_SACI2|LARGE ribosomal subunit protein uL18|Saccharolobus islandicus (strain

Query: 1 RASGRGLQPK 10
R GRGL P+
Sbjct: 169 RYLGRGLNPE 178




93|Sequence|461|470|GLQPKGVRIR

>sp|ECFA1_METHJ|ENERGY-COUPLING factor transporter ATP-binding protein|Methanospirillum hungatei

Query: 1 GLQPKGVR 8
GL P+GVR
Sbjct: 167 GLDPQGVR 174


>sp|NEP1_METTP|RIBOSOMAL RNA small subunit methyltransferase|Methanothrix thermoacetophila

Query: 2 LQPKGVRIR 10
L PKG R+R
Sbjct: 152 LSPKGRRVR 160


>sp|ATGT_HALMA|TRNA-GUANINE(15) transglycosylase|Haloarcula marismortui (strain ATCC 43049

Query: 4 PKGVRIR 10
P+GVR+R
Sbjct: 478 PEGVRLR 484


>sp|PYRC_THEKO|DIHYDROOROTASE kodakarensis (strain ATCC BAA-918

Query: 3 QPKGVRI 9
+PKGVR+
Sbjct: 396 EPKGVRL 402


>sp|RS6E_PYRCJ|SMALL ribosomal subunit protein eS6|Pyrobaculum calidifontis (strain

Query: 4 PKGVRIR 10
PKGV+IR
Sbjct: 50 PKGVKIR 56


>sp|GLYA_PYRIL|SERINE hydroxymethyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 LQPKGVRI 9
L+P G+RI
Sbjct: 353 LKPSGIRI 360


>sp|RL4_META3|LARGE ribosomal subunit protein uL4|Methanococcus aeolicus (strain ATCC

Query: 2 LQPKGVRI 9
LQPKGV +
Sbjct: 43 LQPKGVDL 50


>sp|RNP2_HALLT|RIBONUCLEASE P protein component 2|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 QPKGVRIR 10
+P GVR+R
Sbjct: 93 EPVGVRVR 100


>sp|AATB_SACI7|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 GLQPKGVRIR 10
G+ P G +IR
Sbjct: 64 GVSPTGTKIR 73


>sp|AATB_SACI6|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.16.4 /

Query: 1 GLQPKGVRIR 10
G+ P G +IR
Sbjct: 64 GVSPTGTKIR 73


>sp|AATB_SACI4|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GLQPKGVRIR 10
G+ P G +IR
Sbjct: 64 GVSPTGTKIR 73


>sp|AATB_SACI3|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.16.27)

Query: 1 GLQPKGVRIR 10
G+ P G +IR
Sbjct: 64 GVSPTGTKIR 73


>sp|AATB_SACI2|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain L.S.2.15

Query: 1 GLQPKGVRIR 10
G+ P G +IR
Sbjct: 64 GVSPTGTKIR 73


>sp|AATB_SACI1|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 GLQPKGVRIR 10
G+ P G +IR
Sbjct: 64 GVSPTGTKIR 73


>sp|AATB_SACS2|A-TYPE ATP synthase subunit B|Saccharolobus solfataricus (strain ATCC

Query: 1 GLQPKGVRIR 10
G+ P G +IR
Sbjct: 64 GVSPTGTKIR 73


>sp|GCH1_SULAC|GTP cyclohydrolase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LQPKGVRI 9
+QPKGV +
Sbjct: 148 IQPKGVMV 155




94|Sequence|466|475|GVRIRETTDF

>sp|PYRB_THEGJ|ASPARTATE carbamoyltransferase catalytic subunit|Thermococcus gammatolerans

Query: 1 GVRIRETTDF 10
GV+I ETTD
Sbjct: 206 GVKIHETTDL 215


>sp|PYRB_THEON|ASPARTATE carbamoyltransferase catalytic subunit|Thermococcus onnurineus

Query: 1 GVRIRETTDF 10
GV++ ETTD
Sbjct: 206 GVKVHETTDL 215


>sp|FDHB2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 2 VRIRETTDF 10
++IRETT F
Sbjct: 354 LKIRETTGF 362


>sp|HIS8_HALWD|HISTIDINOL-PHOSPHATE aminotransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GVRIRETTDF 10
GV IR+TT F
Sbjct: 319 GVIIRDTTSF 328


>sp|TREH_THEVO|TREHALASE volcanium (strain ATCC 51530

Query: 2 VRIRETTDF 10
+R++ETTD+
Sbjct: 225 LRLQETTDY 233


>sp|TREH_THEAC|TREHALASE acidophilum (strain ATCC 25905

Query: 2 VRIRETTDF 10
+R++ETTD+
Sbjct: 183 LRLQETTDY 191


>sp|AROA_PYRFU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GVRIRETTD 9
G+R+RE +D
Sbjct: 337 GIRVRELSD 345


>sp|PYRB_THEKO|ASPARTATE carbamoyltransferase catalytic subunit|Thermococcus kodakarensis

Query: 1 GVRIRETTDF 10
GV++ ETTD
Sbjct: 206 GVKVYETTDL 215


>sp|SYP_METAR|PROLINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 VRIRETTDF 10
+R+RE T F
Sbjct: 152 IRLREITSF 160


>sp|AGLM_HALVD|UDP-GLUCOSE 6-dehydrogenase AglM|Haloferax volcanii (strain ATCC 29605

Query: 1 GVRIRETTDF 10
G R+R TTD+
Sbjct: 60 GDRLRATTDY 69


>sp|HIS8_NATPD|HISTIDINOL-PHOSPHATE aminotransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GVRIRETTDF 10
GV +R+TT F
Sbjct: 319 GVIVRDTTSF 328


>sp|PYRB_METTP|ASPARTATE carbamoyltransferase catalytic subunit|Methanothrix

Query: 1 GVRIRETTDF 10
G R+RE +D
Sbjct: 203 GTRVREVSDL 212


>sp|GUAAB_THEVO|GMP synthase [glutamine-hydrolyzing] subunit B|Thermoplasma volcanium

Query: 1 GVRIRETTD 9
G+R+ ETTD
Sbjct: 256 GIRMIETTD 264


>sp|SYP_METMA|PROLINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VRIRETTDF 10
+R+RE T F
Sbjct: 155 IRLREITSF 163


>sp|SYP_METLZ|PROLINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 VRIRETTDF 10
+R+RE T F
Sbjct: 152 IRLREITSF 160


>sp|SYP_METBU|PROLINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 VRIRETTDF 10
+R+RE T F
Sbjct: 154 IRLREITSF 162


>sp|SYP_ARCFU|PROLINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VRIRETTDF 10
+R+RE T F
Sbjct: 147 IRLREITSF 155


>sp|SYP_METAC|PROLINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 VRIRETTDF 10
+R+RE T F
Sbjct: 155 IRLREITSF 163


>sp|SYP_METBF|PROLINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 VRIRETTDF 10
+R+RE T F
Sbjct: 155 IRLREITSF 163


>sp|RL30_PICTO|LARGE ribosomal subunit protein uL30|Picrophilus torridus (strain ATCC

Query: 2 VRIRETTDF 10
V +RET DF
Sbjct: 33 VIVRETPDF 41


>sp|SYP_METTP|PROLINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 VRIRETTDF 10
+R+RE T F
Sbjct: 155 IRLREITSF 163


>sp|SYP_METHJ|PROLINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 VRIRETTDF 10
+R+RE T F
Sbjct: 152 IRLREITSF 160


>sp|SYP_METMJ|PROLINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 VRIRETTDF 10
+R+RE T F
Sbjct: 152 IRLREITSF 160


>sp|SYP_METB6|PROLINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 VRIRETTDF 10
+R+RE T F
Sbjct: 152 IRLREITSF 160




95|Sequence|471|480|ETTDFKVDTK

>sp|PYRG_SACS2|CTP synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ETTDFKVDTK 10
E+TD + DTK
Sbjct: 333 ESTDLESDTK 342


>sp|CMR3_SACS2|CRISPR system CMR subunit Cmr3|Saccharolobus solfataricus (strain ATCC

Query: 1 ETTDFKVDT 9
E D+KVDT
Sbjct: 199 EVDDYKVDT 207




96|Sequence|476|485|KVDTKAAGSG

***** No hits found ******


97|Sequence|481|490|AAGSGELGVT

>sp|DAPB_METS3|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 AGSGELGV 9
AG+GELGV
Sbjct: 49 AGAGELGV 56


>sp|CYDE_METJA|L-CYSTEINE desulfidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 AGSGELGVT 10
AGSG +G+T
Sbjct: 230 AGSGNMGLT 238


>sp|PURT_PYRHO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus horikoshii

Query: 3 GSGELG 8
GSGELG
Sbjct: 23 GSGELG 28


>sp|HEM1_METMJ|GLUTAMYL-TRNA reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 GSGELGV 9
GSGE+GV
Sbjct: 179 GSGEMGV 185


>sp|PURT_PYRAB|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus abyssi

Query: 3 GSGELG 8
GSGELG
Sbjct: 23 GSGELG 28


>sp|PURT_PYRFU|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus furiosus

Query: 3 GSGELG 8
GSGELG
Sbjct: 23 GSGELG 28


>sp|PURT_SACS2|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Saccharolobus

Query: 3 GSGELG 8
GSGELG
Sbjct: 18 GSGELG 23


>sp|PURT_METVS|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 3 GSGELG 8
GSGELG
Sbjct: 17 GSGELG 22


>sp|HEM1_METMA|GLUTAMYL-TRNA reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GSGELGV 9
G+GE+GV
Sbjct: 180 GAGEIGV 186


>sp|PURT_THEKO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Thermococcus

Query: 3 GSGELG 8
GSGELG
Sbjct: 23 GSGELG 28


>sp|PURT_METMP|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 3 GSGELG 8
GSGELG
Sbjct: 17 GSGELG 22


>sp|PURT_METM7|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 3 GSGELG 8
GSGELG
Sbjct: 17 GSGELG 22


>sp|PURT_METM5|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 3 GSGELG 8
GSGELG
Sbjct: 17 GSGELG 22


>sp|HEM1_METBF|GLUTAMYL-TRNA reductase|Methanosarcina barkeri (strain Fusaro /

Query: 3 GSGELGV 9
G+GE+GV
Sbjct: 179 GAGEIGV 185


>sp|PURT_METJA|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanocaldococcus

Query: 3 GSGELG 8
GSGELG
Sbjct: 18 GSGELG 23




98|Sequence|486|495|ELGVTMKGPK

>sp|RL6_METTH|LARGE ribosomal subunit protein uL6|Methanothermobacter

Query: 3 GVTMKGPK 10
GVT+KGPK
Sbjct: 24 GVTVKGPK 31


>sp|RL6_DESA1|LARGE ribosomal subunit protein uL6|Desulfurococcus amylolyticus

Query: 2 LGVTMKGPK 10
L VT+KGPK
Sbjct: 24 LRVTVKGPK 32


>sp|RL6_HYPBU|LARGE ribosomal subunit protein uL6|Hyperthermus butylicus (strain DSM

Query: 2 LGVTMKGPK 10
L VT+KGPK
Sbjct: 24 LKVTVKGPK 32


>sp|GVPF1_HALSA|GAS vesicle protein F1|Halobacterium salinarum (strain ATCC 700922

Query: 1 ELGVTMKGP 9
ELGV + GP
Sbjct: 113 ELGVKILGP 121


>sp|RS10_METS5|SMALL ribosomal subunit protein uS10|Metallosphaera sedula (strain ATCC

Query: 3 GVTMKGP 9
GV+M+GP
Sbjct: 32 GVSMRGP 38


>sp|RL6_METKA|LARGE ribosomal subunit protein uL6|Methanopyrus kandleri (strain AV19

Query: 4 VTMKGPK 10
VT+KGPK
Sbjct: 43 VTVKGPK 49


>sp|FRXA_PYRFU|PROTEIN FrxA|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LGVTMKGPK 10
+GVT+K PK
Sbjct: 101 VGVTIKEPK 109


>sp|RL5_PYRFU|LARGE ribosomal subunit protein uL5|Pyrococcus furiosus (strain ATCC

Query: 4 VTMKGPK 10
VT++GPK
Sbjct: 80 VTLRGPK 86


>sp|Y36K_HALSN|UNCHARACTERIZED 36 kDa protein|Halobacterium sp. (strain GN101)

Query: 2 LGVTMKGP 9
LGV +KGP
Sbjct: 167 LGVFVKGP 174


>sp|RS10_PYRIL|SMALL ribosomal subunit protein uS10|Pyrobaculum islandicum (strain DSM

Query: 1 ELGVTMKGP 9
++GV +KGP
Sbjct: 34 KMGVQVKGP 42


>sp|RL5_PYRAB|LARGE ribosomal subunit protein uL5|Pyrococcus abyssi (strain GE5 /

Query: 4 VTMKGPK 10
VT++GPK
Sbjct: 80 VTLRGPK 86


>sp|RL5_PYRHO|LARGE ribosomal subunit protein uL5|Pyrococcus horikoshii (strain ATCC

Query: 4 VTMKGPK 10
VT++GPK
Sbjct: 80 VTLRGPK 86


>sp|PUR2_METJA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ELGVTMKGPK 10
E+G++ GPK
Sbjct: 86 EMGISAVGPK 95


>sp|SLAB_ACIAM|S-LAYER protein B|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 LGVTMKGP 9
+GVT+ GP
Sbjct: 65 VGVTISGP 72




99|Sequence|491|500|MKGPKGLEEL

>sp|GCSPA_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 3 GPKGLEEL 10
GPKGL EL
Sbjct: 349 GPKGLREL 356


>sp|GCSPA_PYRFU|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus furiosus

Query: 3 GPKGLEEL 10
GPKG++EL
Sbjct: 349 GPKGMQEL 356


>sp|Y1112_PYRHO|UPF0127 protein PH1112|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 MKGPKGLEE 9
++GP+GL+E
Sbjct: 93 IEGPRGLKE 101


>sp|THII_SACI6|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 MKGPKGL 7
+KGPKGL
Sbjct: 159 IKGPKGL 165


>sp|THII_SACI3|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain M.16.27)

Query: 1 MKGPKGL 7
+KGPKGL
Sbjct: 159 IKGPKGL 165


>sp|THII_SACI4|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 MKGPKGL 7
+KGPKGL
Sbjct: 159 IKGPKGL 165


>sp|THII_SACS2|PROBABLE tRNA sulfurtransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 MKGPKGL 7
+KGPKGL
Sbjct: 157 IKGPKGL 163


>sp|RL6_DESA1|LARGE ribosomal subunit protein uL6|Desulfurococcus amylolyticus

Query: 1 MKGPKGL 7
+KGPKG+
Sbjct: 28 VKGPKGI 34


>sp|GCSPA_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 3 GPKGLEEL 10
GP+GL EL
Sbjct: 347 GPRGLREL 354


>sp|GCSPA_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 3 GPKGLEEL 10
GPKG+ EL
Sbjct: 350 GPKGIREL 357


>sp|GCSPA_THEKO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 3 GPKGLEEL 10
GPKG+ EL
Sbjct: 347 GPKGVREL 354


>sp|THSG_SACSH|CHAPERONIN subunit gamma|Saccharolobus shibatae (strain ATCC 51178

Query: 3 GPKGLEEL 10
GPKGL+++
Sbjct: 37 GPKGLDKM 44


>sp|THSB_HALSA|THERMOSOME subunit beta|Halobacterium salinarum (strain ATCC 700922

Query: 3 GPKGLEEL 10
GPKG++++
Sbjct: 47 GPKGMDKM 54


>sp|PGK_PICTO|PHOSPHOGLYCERATE kinase|Picrophilus torridus (strain ATCC 700027

Query: 1 MKGPKGLEEL 10
M GP G+ E+
Sbjct: 325 MNGPMGIYEI 334


>sp|THII_SACI7|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 MKGPKGL 7
+KGP+GL
Sbjct: 159 IKGPRGL 165


>sp|THII_SACI2|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 MKGPKGL 7
+KGP+GL
Sbjct: 159 IKGPRGL 165


>sp|THII_SACI1|PROBABLE tRNA sulfurtransferase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 MKGPKGL 7
+KGP+GL
Sbjct: 159 IKGPRGL 165


>sp|THSG_SACS2|CHAPERONIN subunit gamma|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 GPKGLEEL 10
GPKGL+++
Sbjct: 37 GPKGLDKM 44


>sp|PGK_THEAC|PHOSPHOGLYCERATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 MKGPKGLEEL 10
M GP G+ E+
Sbjct: 324 MNGPMGMYEI 333


>sp|THSA_SACS2|CHAPERONIN subunit alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 GPKGLEEL 10
GPKGL+++
Sbjct: 40 GPKGLDKM 47


>sp|RL6_METHJ|LARGE ribosomal subunit protein uL6|Methanospirillum hungatei JF-1

Query: 1 MKGPKG 6
+KGPKG
Sbjct: 24 VKGPKG 29


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC 43049

Query: 3 GPKGLEEL 10
GP G+EE+
Sbjct: 1063 GPDGIEEV 1070


>sp|RNZ_NITMS|RIBONUCLEASE Z|Nitrosopumilus maritimus (strain SCM1)

Query: 3 GPKGLEEL 10
GP G+EE
Sbjct: 89 GPSGIEEF 96


>sp|PGK_THEVO|PHOSPHOGLYCERATE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 MKGPKGLEEL 10
M GP G+ E+
Sbjct: 324 MNGPMGIYEI 333


>sp|THSA_SACSH|CHAPERONIN subunit alpha|Saccharolobus shibatae (strain ATCC 51178

Query: 3 GPKGLEEL 10
GPKGL+++
Sbjct: 40 GPKGLDKM 47


>sp|THS2_HALVD|CHAPERONIN subunit CTT2|Haloferax volcanii (strain ATCC 29605

Query: 3 GPKGLEEL 10
GPKG++++
Sbjct: 46 GPKGMDKM 53


>sp|RL6_SACS2|LARGE ribosomal subunit protein uL6|Saccharolobus solfataricus (strain

Query: 1 MKGPKG 6
+KGPKG
Sbjct: 27 IKGPKG 32


>sp|RNZ_METS5|RIBONUCLEASE Z|Metallosphaera sedula (strain ATCC 51363

Query: 3 GPKGLEEL 10
GP+GL++L
Sbjct: 89 GPEGLKDL 96


>sp|RL6_SULAC|LARGE ribosomal subunit protein uL6|Sulfolobus acidocaldarius (strain

Query: 1 MKGPKG 6
+KGPKG
Sbjct: 30 VKGPKG 35


>sp|RNZ_IGNH4|RIBONUCLEASE Z|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 GPKGLEEL 10
GPKGL++
Sbjct: 92 GPKGLKDF 99


>sp|Y1460_METJA|UNCHARACTERIZED protein MJ1460|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MKGPKGLEEL 10
M PK +EEL
Sbjct: 62 MLSPKNIEEL 71


>sp|THSA_THEAC|THERMOSOME subunit alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 GPKGLEEL 10
GPKG++++
Sbjct: 43 GPKGMDKM 50




100|Sequence|496|505|GLEELVKQKD

>sp|Y1085_METJA|UNCHARACTERIZED protein MJ1085|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GLEELVKQ 8
GLEELVK+
Sbjct: 135 GLEELVKE 142


>sp|COBS_METBU|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GLEELVKQ 8
GL+ELVK+
Sbjct: 26 GLDELVKR 33


>sp|NNR_ARCFU|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Archaeoglobus fulgidus (strain

Query: 2 LEELVKQKD 10
LEELVK+ D
Sbjct: 290 LEELVKRHD 298


>sp|RPO4_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo4|Sulfolobus acidocaldarius (strain

Query: 2 LEELVKQKD 10
LEE+VK++D
Sbjct: 60 LEEIVKRED 68


>sp|RL5_ARCFU|LARGE ribosomal subunit protein uL5|Archaeoglobus fulgidus (strain ATCC

Query: 2 LEELVKQK 9
LEELV+QK
Sbjct: 44 LEELVEQK 51


>sp|HCP_METTH|HYDROXYLAMINE reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GLEELVKQKD 10
LEEL+KQ +
Sbjct: 133 ALEELLKQTE 142


>sp|RFCS_METMJ|REPLICATION factor C small subunit|Methanoculleus marisnigri (strain ATCC

Query: 2 LEELVKQKD 10
L+E+V QKD
Sbjct: 17 LDEMVGQKD 25


>sp|AGLB_METJA|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GLEELVKQKD 10
G++ELV KD
Sbjct: 850 GVKELVLNKD 859


>sp|RLMH_METB6|PUTATIVE ribosomal RNA large subunit|Methanoregula boonei (strain DSM

Query: 1 GLEELVKQKD 10
G EEL K+K+
Sbjct: 50 GQEELAKEKE 59


>sp|YSO3_ACIAM|UNCHARACTERIZED protein in sor 5'region|Acidianus ambivalens (Desulfurolobus

Query: 2 LEELVKQKD 10
+EE+VK KD
Sbjct: 195 IEEIVKDKD 203




101|Sequence|501|510|VKQKDFLDGV

>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VKQKDFLDGV 10
V QK+FLD +
Sbjct: 696 VSQKNFLDAL 705


>sp|TRPD_METM7|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C7 /

Query: 5 DFLDGV 10
DFLDGV
Sbjct: 294 DFLDGV 299


>sp|TRPD_METM6|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C6 /

Query: 5 DFLDGV 10
DFLDGV
Sbjct: 294 DFLDGV 299


>sp|TRPD_METM5|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C5 /

Query: 5 DFLDGV 10
DFLDGV
Sbjct: 294 DFLDGV 299


>sp|TPSP_THETK|BIFUNCTIONAL trehalose-6-phosphate synthase/phosphatase|Thermoproteus tenax

Query: 2 KQKDFLDG 9
+ +DFLDG
Sbjct: 545 RGRDFLDG 552


>sp|TRPD_METMP|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain DSM

Query: 5 DFLDGV 10
DFLDGV
Sbjct: 294 DFLDGV 299


>sp|GATE_THEVO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermoplasma volcanium (strain ATCC

Query: 3 QKDFLDGV 10
QKD LDGV
Sbjct: 357 QKDELDGV 364


>sp|NUOCD_HALVD|NADH-QUINONE oxidoreductase subunit C/D|Haloferax volcanii (strain ATCC 29605

Query: 2 KQKDFLDGV 10
K +DF+DG+
Sbjct: 356 KIRDFMDGL 364


>sp|MRE11_SULAC|DNA double-strand break repair protein|Sulfolobus acidocaldarius

Query: 2 KQKDFLDG 9
++KD+LDG
Sbjct: 191 RRKDYLDG 198


>sp|RSMA_SACS2|PROBABLE ribosomal RNA small subunit|Saccharolobus solfataricus (strain

Query: 1 VKQKDFLDGV 10
+ QKDF+D +
Sbjct: 86 ILQKDFVDKI 95




102|Sequence|506|515|FLDGVYAFEY

>sp|RL6_AERPE|LARGE ribosomal subunit protein uL6|Aeropyrum pernix (strain ATCC 700893

Query: 1 FLDGVYAFE 9
F+DG+Y +E
Sbjct: 169 FMDGIYIYE 177


>sp|RL6_DESA1|LARGE ribosomal subunit protein uL6|Desulfurococcus amylolyticus (strain

Query: 1 FLDGVYAFE 9
F+DG+Y +E
Sbjct: 171 FMDGIYIYE 179


>sp|RL6_HYPBU|LARGE ribosomal subunit protein uL6|Hyperthermus butylicus (strain DSM

Query: 1 FLDGVYAFE 9
F+DG+Y +E
Sbjct: 173 FIDGIYIYE 181


>sp|UPP_THEGJ|URACIL phosphoribosyltransferase|Thermococcus gammatolerans (strain DSM

Query: 3 DGVYAFE 9
DGVY+FE
Sbjct: 8 DGVYSFE 14


>sp|PSTA_METJA|PROBABLE phosphate transport system permease|Methanocaldococcus jannaschii

Query: 1 FLDGVYAFEY 10
FL G YA+E+
Sbjct: 87 FLAGAYAYEF 96


>sp|PDXT_METMP|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus maripaludis

Query: 3 DGVYAFEY 10
DGV A+EY
Sbjct: 171 DGVIAYEY 178


>sp|PDXT_METM5|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus maripaludis

Query: 3 DGVYAFEY 10
DGV A+EY
Sbjct: 171 DGVIAYEY 178


>sp|PDXT_METM6|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus maripaludis

Query: 3 DGVYAFEY 10
DG+ A+EY
Sbjct: 171 DGIIAYEY 178


>sp|RL6_STAMF|LARGE ribosomal subunit protein uL6|Staphylothermus marinus (strain ATCC

Query: 1 FLDGVYAFEY 10
F DG+Y +++
Sbjct: 172 FADGIYIYDW 181


>sp|RL6_IGNH4|LARGE ribosomal subunit protein uL6|Ignicoccus hospitalis (strain KIN4/I

Query: 1 FLDGVYAF 8
F+DG+Y +
Sbjct: 173 FMDGIYIY 180


>sp|UPP_THEON|URACIL phosphoribosyltransferase|Thermococcus onnurineus (strain NA1)

Query: 3 DGVYAFE 9
+GVY+FE
Sbjct: 8 EGVYSFE 14


>sp|UPP_THEKO|URACIL phosphoribosyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 3 DGVYAFE 9
+GVY+FE
Sbjct: 8 EGVYSFE 14


>sp|UPP_METMP|URACIL phosphoribosyltransferase|Methanococcus maripaludis (strain DSM

Query: 3 DGVYAFE 9
+GVY+FE
Sbjct: 8 EGVYSFE 14


>sp|UPP_METM7|URACIL phosphoribosyltransferase|Methanococcus maripaludis (strain C7 /

Query: 3 DGVYAFE 9
+GVY+FE
Sbjct: 8 EGVYSFE 14


>sp|UPP_METM6|URACIL phosphoribosyltransferase|Methanococcus maripaludis (strain C6 /

Query: 3 DGVYAFE 9
+GVY+FE
Sbjct: 8 EGVYSFE 14


>sp|UPP_METM5|URACIL phosphoribosyltransferase|Methanococcus maripaludis (strain C5 /

Query: 3 DGVYAFE 9
+GVY+FE
Sbjct: 8 EGVYSFE 14


>sp|TRUB_THEVO|PROBABLE tRNA pseudouridine synthase B|Thermoplasma volcanium (strain ATCC

Query: 1 FLDGVYAF 8
FLD YAF
Sbjct: 201 FLDMTYAF 208


>sp|Y1944_ARCFU|UNCHARACTERIZED protein AF_1944|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FLDGVYAFEY 10
FLDGV EY
Sbjct: 179 FLDGVAIHEY 188


>sp|PDXT_METM7|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus maripaludis

Query: 3 DGVYAFEY 10
DGV +EY
Sbjct: 171 DGVIVYEY 178


>sp|Y1515_METJA|UNCHARACTERIZED protein MJ1515|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FLDGVYAFEY 10
F DG Y F Y
Sbjct: 170 FSDGEYLFAY 179


>sp|PURP_SACS2|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Saccharolobus solfataricus (strain

Query: 1 FLDGVYAF 8
F+D +YA+
Sbjct: 42 FIDNIYAY 49


>sp|RL6_SULTO|LARGE ribosomal subunit protein uL6|Sulfurisphaera tokodaii (strain DSM

Query: 1 FLDGVYAFE 9
F DG+Y ++
Sbjct: 168 FADGIYIYK 176


>sp|AATI_THEKO|A-TYPE ATP synthase subunit I|Thermococcus kodakarensis (strain ATCC

Query: 1 FLDGVYAFEY 10
F DG Y F Y
Sbjct: 405 FNDGTYKFAY 414




103|Sequence|511|520|YAFEYYPSTP

>sp|PCNA_METTP|DNA polymerase sliding clamp|Methanothrix thermoacetophila (strain

Query: 2 AFEYYPSTP 10
AFE+Y +TP
Sbjct: 55 AFEFYQATP 63


>sp|AROC_HALWD|CHORISMATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 YAFEYYPSTP 10
Y EY+PS+P
Sbjct: 371 YETEYHPSSP 380


>sp|RL13_THEVO|LARGE ribosomal subunit protein uL13|Thermoplasma volcanium (strain

Query: 5 YYPSTP 10
YYP TP
Sbjct: 63 YYPKTP 68


>sp|RL13_THEAC|LARGE ribosomal subunit protein uL13|Thermoplasma acidophilum (strain

Query: 5 YYPSTP 10
YYP TP
Sbjct: 63 YYPKTP 68


>sp|Y1567_ARCFU|UNCHARACTERIZED protein AF_1567|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 AFEYYPST 9
+FEYYP+T
Sbjct: 128 SFEYYPNT 135


>sp|PSB1_HYPBU|PROTEASOME subunit beta 1|Hyperthermus butylicus (strain DSM 5456

Query: 1 YAFEYYP 7
Y+++YYP
Sbjct: 96 YSYKYYP 102


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 3 FEYYP 7
FEYYP
Sbjct: 557 FEYYP 561


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 3 FEYYP 7
FEYYP
Sbjct: 557 FEYYP 561


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 3 FEYYP 7
FEYYP
Sbjct: 557 FEYYP 561


>sp|MTHK_METTH|CALCIUM-GATED potassium channel MthK|Methanothermobacter thermautotrophicus

Query: 4 EYYPSTP 10
+Y PSTP
Sbjct: 64 DYSPSTP 70


>sp|AROC_HALLT|CHORISMATE synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 YAFEYYPSTP 10
Y +Y+PS+P
Sbjct: 383 YDTDYHPSSP 392


>sp|AROC_HALSA|CHORISMATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 YAFEYYPSTP 10
Y +Y+PS+P
Sbjct: 382 YDTDYHPSSP 391


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 3 FEYYP 7
FEYYP
Sbjct: 557 FEYYP 561


>sp|AROC_HALMD|CHORISMATE synthase|Halomicrobium mukohataei (strain ATCC 700874

Query: 1 YAFEYYPSTP 10
Y +Y+PS+P
Sbjct: 389 YDTDYHPSSP 398


>sp|AROC_HALMA|CHORISMATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 YAFEYYPSTP 10
Y +Y+PS+P
Sbjct: 373 YDTDYHPSSP 382


>sp|CBIA_PICTO|COBYRINATE a,c-diamide synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 YAFEYYPSTP 10
Y Y+PS P
Sbjct: 418 YMHLYFPSNP 427


>sp|RRP41_METKA|EXOSOME complex component Rrp41|Methanopyrus kandleri (strain AV19 /

Query: 4 EYYPST 9
EYYP T
Sbjct: 114 EYYPRT 119




104|Sequence|516|525|YPSTPGRYSI

>sp|PAN_METHJ|PROTEASOME-ACTIVATING nucleotidase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PSTPGRYSI 10
P T GRYSI
Sbjct: 324 PDTEGRYSI 332


>sp|Y1996_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 YPSTPGR 7
YP++PGR
Sbjct: 289 YPASPGR 295


>sp|CCA_SULTO|CCA-ADDING enzyme|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YPSTPGRYSI 10
+PS PGR +I
Sbjct: 253 FPSKPGRQTI 262


>sp|LEUD_PYRHO|3-ISOPROPYLMALATE dehydratase small subunit|Pyrococcus horikoshii (strain ATCC

Query: 4 TPGRYSI 10
TPGRY++
Sbjct: 20 TPGRYNL 26


>sp|LEUD2_PYRFU|3-ISOPROPYLMALATE dehydratase small subunit 2|Pyrococcus furiosus (strain ATCC

Query: 4 TPGRYSI 10
TPGRY++
Sbjct: 20 TPGRYNL 26


>sp|LEUD2_PYRAB|3-ISOPROPYLMALATE dehydratase small subunit 2|Pyrococcus abyssi (strain GE5 /

Query: 4 TPGRYSI 10
TPGRY++
Sbjct: 20 TPGRYNL 26


>sp|LEUD_THEKO|3-ISOPROPYLMALATE dehydratase small subunit|Thermococcus kodakarensis (strain ATCC

Query: 4 TPGRYSI 10
TPGRY++
Sbjct: 20 TPGRYNL 26


>sp|UVRB_METTH|UVRABC system protein B|Methanothermobacter thermautotrophicus (strain

Query: 3 STPGRYSI 10
+TPGRY +
Sbjct: 392 ATPGRYEL 399


>sp|CMR2_SACS2|CRISPR system CMR subunit Cmr2|Saccharolobus solfataricus (strain ATCC

Query: 1 YPSTPGRYSI 10
YP PGR ++
Sbjct: 307 YPIIPGRITL 316


>sp|RRP42_ARCFU|EXOSOME complex component Rrp42|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YPSTPGR 7
YP TP R
Sbjct: 70 YPDTPDR 76


>sp|PORB_PYRHO|PYRUVATE synthase subunit PorB|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 STPGRYSI 10
S PG+YSI
Sbjct: 161 SPPGKYSI 168


>sp|PORB_PYRAB|PYRUVATE synthase subunit PorB|Pyrococcus abyssi (strain GE5 /

Query: 3 STPGRYSI 10
S PG+YSI
Sbjct: 161 SPPGKYSI 168


>sp|SLAA_METS5|S-LAYER protein A|Metallosphaera sedula (strain ATCC 51363

Query: 2 PSTPGRYSI 10
P+ PG Y+I
Sbjct: 1327 PTMPGSYTI 1335


>sp|PORB_PYRFU|PYRUVATE synthase subunit PorB|Pyrococcus furiosus (strain ATCC 43587

Query: 3 STPGRYSI 10
S PG+YS+
Sbjct: 161 SPPGKYSV 168


>sp|QOX2_SULAC|QUINOL oxidase subunit 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 YPSTPGRYS 9
+P +PG+YS
Sbjct: 62 HPPSPGQYS 70




105|Sequence|521|530|GRYSIAITWG

>sp|MRE11_PYRAB|DNA double-strand break repair protein|Pyrococcus abyssi (strain GE5 /

Query: 1 GRYSIAITW 9
G YS+ +TW
Sbjct: 234 GDYSLKLTW 242


>sp|GPDA_ARCFU|NADP(+)-DEPENDENT glycerol-3-phosphate dehydrogenase|Archaeoglobus fulgidus (strain

Query: 3 YSIAITW 9
YSIAI W
Sbjct: 195 YSIAIAW 201


>sp|TYSY_METKA|PUTATIVE thymidylate synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 RYSIAITW 9
R +IA+TW
Sbjct: 117 RRAIAVTW 124


>sp|TYSY_METJA|PUTATIVE thymidylate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 RYSIAITW 9
R ++AITW
Sbjct: 114 RRAVAITW 121


>sp|GUAAB_SACI7|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 GRYSIAI 7
G+YSIAI
Sbjct: 308 GKYSIAI 314


>sp|GUAAB_SACI6|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 GRYSIAI 7
G+YSIAI
Sbjct: 308 GKYSIAI 314


>sp|GUAAB_SACI4|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 GRYSIAI 7
G+YSIAI
Sbjct: 308 GKYSIAI 314


>sp|GUAAB_SACI3|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 GRYSIAI 7
G+YSIAI
Sbjct: 308 GKYSIAI 314


>sp|GUAAB_SACI2|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 GRYSIAI 7
G+YSIAI
Sbjct: 308 GKYSIAI 314


>sp|GUAAB_SACI1|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 GRYSIAI 7
G+YSIAI
Sbjct: 308 GKYSIAI 314


>sp|GUAAB_SACS2|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 1 GRYSIAI 7
G+YS+AI
Sbjct: 308 GKYSVAI 314


>sp|TYSY_METBF|PUTATIVE thymidylate synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 RYSIAITW 9
R +IA+TW
Sbjct: 119 RRAIAVTW 126


>sp|HMED_ARCPA|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 2 RYSIAITW 9
RY + +TW
Sbjct: 283 RYGLTVTW 290


>sp|IXTPA_PICTO|DITP/XTP pyrophosphatase|Picrophilus torridus (strain ATCC 700027

Query: 1 GRYSIAITW 9
G Y+I I W
Sbjct: 19 GNYNIDIKW 27


>sp|RL3_AERPE|LARGE ribosomal subunit protein uL3|Aeropyrum pernix (strain ATCC 700893

Query: 1 GRYSIAITWG 10
GRYS+ W
Sbjct: 98 GRYSLGEAWA 107


>sp|Y2172_ARCFU|UNCHARACTERIZED protein AF_2172|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 YSIAITWG 10
Y+I++ WG
Sbjct: 27 YTISVDWG 34


>sp|KDPA_METB6|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Methanoregula boonei (strain DSM

Query: 1 GRYSIAI 7
GRY+IAI
Sbjct: 510 GRYAIAI 516


>sp|NARG_HALMT|RESPIRATORY nitrate reductase subunit alpha|Haloferax mediterranei (strain ATCC

Query: 1 GRYSIAITW 9
GR++I TW
Sbjct: 849 GRWAIHSTW 857




106|Sequence|526|535|AITWGGHHIP

>sp|TRPB2_ARCFU|TRYPTOPHAN synthase beta chain 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 TWGGHHIP 10
TWGG IP
Sbjct: 179 TWGGEVIP 186


>sp|CDC6_DESA1|ORC1-TYPE DNA replication protein|Desulfurococcus amylolyticus (strain DSM

Query: 3 TWGGHHI 9
+WGG HI
Sbjct: 140 SWGGLHI 146


>sp|MTRD_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanosarcina mazei (strain ATCC

Query: 2 ITWGGHHIP 10
I+WG H +P
Sbjct: 22 ISWGVHFVP 30


>sp|TOP6B_PYRAE|TYPE 2 DNA topoisomerase 6|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 AITWGGHHIP 10
A+ WGG P
Sbjct: 350 AVAWGGQIPP 359


>sp|ATGT_PICTO|TRNA-GUANINE(15) transglycosylase|Picrophilus torridus (strain ATCC 700027

Query: 2 ITWGGHHIP 10
++W G +IP
Sbjct: 415 VSWNGIYIP 423


>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 TWGGHH 8
T GGHH
Sbjct: 141 TMGGHH 146


>sp|SYA_METJA|ALANINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 TWGGHH 8
T GGHH
Sbjct: 144 TMGGHH 149


>sp|SYA_META3|ALANINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 TWGGHH 8
T GGHH
Sbjct: 146 TMGGHH 151


>sp|FBPAP_CENSY|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Cenarchaeum symbiosum (strain A)

Query: 3 TWGGHHIP 10
T G HH+P
Sbjct: 260 TRGSHHMP 267


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 4 WGGH 7
WGGH
Sbjct: 1232 WGGH 1235


>sp|Y570_METJA|UNCHARACTERIZED protein MJ0570|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 TWGGHHI 9
TWG +HI
Sbjct: 208 TWGIYHI 214


>sp|TRPC_PYRAR|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 AITWGG 6
A TWGG
Sbjct: 160 AATWGG 165


>sp|MFNA_HALMA|PROBABLE L-aspartate decarboxylase|Haloarcula marismortui (strain ATCC 43049

Query: 4 WGGHHIP 10
WGG ++P
Sbjct: 178 WGGFYLP 184


>sp|RRP41_THEVO|EXOSOME complex component Rrp41|Thermoplasma volcanium (strain ATCC 51530

Query: 2 ITWGGHHI 9
I WGG+ I
Sbjct: 46 IEWGGNKI 53


>sp|RRP41_THEAC|EXOSOME complex component Rrp41|Thermoplasma acidophilum (strain ATCC

Query: 2 ITWGGHHI 9
I WGG+ I
Sbjct: 46 IEWGGNKI 53


>sp|COOS_METKA|CARBON monoxide dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 2 ITWGGHHIP 10
++ GGH++P
Sbjct: 455 LSSGGHNVP 463


>sp|DHYS_IGNH4|PROBABLE deoxyhypusine synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 AITWG 5
AITWG
Sbjct: 282 AITWG 286


>sp|MCRA_METAC|METHYL-COENZYME M reductase subunit alpha|Methanosarcina acetivorans (strain ATCC

Query: 3 TWGGHHIP 10
TW HIP
Sbjct: 218 TWQAIHIP 225


>sp|AROA_AERPE|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 AITWGGHHI 9
A +WG H I
Sbjct: 370 ARSWGDHRI 378




107|Sequence|531|540|GHHIPKSPFE

>sp|MTMB2_METBA|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri

Query: 4 IPKSPFE 10
IPKSP+E
Sbjct: 170 IPKSPYE 176


>sp|MTMB1_METBA|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri

Query: 4 IPKSPFE 10
IPKSP+E
Sbjct: 170 IPKSPYE 176


>sp|MTMB3_METBF|MONOMETHYLAMINE methyltransferase MtmB3|Methanosarcina barkeri (strain Fusaro /

Query: 4 IPKSPFE 10
+PKSP+E
Sbjct: 170 VPKSPYE 176


>sp|MTMB2_METBF|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri (strain Fusaro /

Query: 4 IPKSPFE 10
+PKSP+E
Sbjct: 170 VPKSPYE 176


>sp|MTMB2_METAC|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina acetivorans (strain ATCC

Query: 4 IPKSPFE 10
+PKSP+E
Sbjct: 170 VPKSPYE 176


>sp|MTMB1_METBF|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri (strain Fusaro /

Query: 4 IPKSPFE 10
+PKSP+E
Sbjct: 170 VPKSPYE 176


>sp|MTMB1_METAC|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina acetivorans (strain ATCC

Query: 4 IPKSPFE 10
+PKSP+E
Sbjct: 170 VPKSPYE 176


>sp|LHRC_SACS2|ATP-DEPENDENT helicase Lhr-Core|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 HIPKSPFE 10
HIPK+P +
Sbjct: 412 HIPKNPLD 419


>sp|WECC_PYRHO|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GHHIPKSPF 9
GH +PK P+
Sbjct: 256 GHCLPKDPY 264


>sp|RS4_METPE|SMALL ribosomal subunit protein uS4|Methanosphaerula palustris (strain

Query: 1 GHHIPKSPFE 10
G+ PK PFE
Sbjct: 10 GYEAPKRPFE 19


>sp|Y795_METJA|UNCHARACTERIZED protein MJ0795|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 IPKSPFE 10
IPK P+E
Sbjct: 406 IPKKPYE 412


>sp|PYRH_METKA|URIDYLATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 3 HIPKSPFE 10
H+P++P E
Sbjct: 89 HVPETPVE 96


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 GHHIPKSPFE 10
G+ P+SP+E
Sbjct: 5493 GNGTPESPYE 5502


>sp|GUAAB_METJA|GMP synthase [glutamine-hydrolyzing] subunit B|Methanocaldococcus

Query: 3 HIPKSPFE 10
H+P+ PF+
Sbjct: 269 HVPEIPFD 276


>sp|GAPOR_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE:FERREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GHHIPKSPFE 10
GHH+ P+E
Sbjct: 347 GHHVEYEPYE 356


>sp|PRNK_THEKO|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase TK1956|Thermococcus kodakarensis (strain ATCC

Query: 4 IPKSPFE 10
IP+ PFE
Sbjct: 80 IPEGPFE 86


>sp|Y253_METJA|PUTATIVE hydrogenase maturation protease MJ0253|Methanocaldococcus

Query: 1 GHHIPKSPF 9
H++P +PF
Sbjct: 95 AHNVPLAPF 103


>sp|RS4_METHJ|SMALL ribosomal subunit protein uS4|Methanospirillum hungatei JF-1

Query: 2 HHIPKSPFE 10
+ PK PFE
Sbjct: 11 YQTPKRPFE 19


>sp|AATA_IGNH4|A-TYPE ATP synthase subunit A|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 HHIPKSPF 9
H + KSPF
Sbjct: 96 HEVAKSPF 103


>sp|RS4_METB6|SMALL ribosomal subunit protein uS4|Methanoregula boonei (strain DSM

Query: 2 HHIPKSPFE 10
+ PK PFE
Sbjct: 11 YQTPKRPFE 19


>sp|AMTAB_PYRHO|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Pyrococcus

Query: 1 GHHIPKSPFE 10
GH I +SP E
Sbjct: 29 GHEIVESPEE 38


>sp|PYRI_THEVO|ASPARTATE carbamoyltransferase regulatory chain|Thermoplasma volcanium

Query: 1 GHHIPKSPFE 10
G H+P S E
Sbjct: 45 GMHVPSSKME 54


>sp|SYDND_METTH|ASPARTATE--TRNA(ASP/ASN) ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 HIPKSPFE 10
+P++PFE
Sbjct: 278 EVPETPFE 285


>sp|NADM_METTI|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanolobus tindarius

Query: 3 HIPKSPF 9
H PK+PF
Sbjct: 42 HEPKNPF 48


>sp|RUBR1_METJA|PROBABLE Rubredoxin-1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 PKSPFE 10
PK+PFE
Sbjct: 44 PKTPFE 49




108|Sequence|536|545|KSPFEVQVGP

>sp|SYP_METAR|PROLINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 SPFEVQVGP 10
+PF +++GP
Sbjct: 344 TPFRIEIGP 352


>sp|PYRI_METTH|ASPARTATE carbamoyltransferase regulatory chain|Methanothermobacter

Query: 1 KSPFEVQVGP 10
K PFE++V P
Sbjct: 4 KKPFELRVKP 13


>sp|Y2239_ARCFU|UNCHARACTERIZED protein AF_2239|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KSPFEVQVGP 10
K PFE+ V P
Sbjct: 54 KEPFELDVEP 63


>sp|AATA_IGNH4|A-TYPE ATP synthase subunit A|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 SPFEVQVGP 10
SPF V++GP
Sbjct: 70 SPFSVELGP 78


>sp|LYSJ_SULAC|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Sulfolobus

Query: 1 KSPFEVQVGP 10
+ PFE VGP
Sbjct: 140 REPFEPLVGP 149


>sp|DHQS_METST|3-DEHYDROQUINATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 PFEVQVGP 10
PF V GP
Sbjct: 239 PFRVNAGP 246


>sp|DHQS_METS3|3-DEHYDROQUINATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 PFEVQVGP 10
PF V GP
Sbjct: 248 PFRVNAGP 255


>sp|DHQS_META3|3-DEHYDROQUINATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 PFEVQVGP 10
PF V GP
Sbjct: 241 PFRVNAGP 248


>sp|Y662_METJA|UNCHARACTERIZED protein MJ0662|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KSPFEVQVG 9
KSPF+V V
Sbjct: 116 KSPFQVGVA 124


>sp|DHQS_METVS|3-DEHYDROQUINATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 3 PFEVQVGP 10
PF V GP
Sbjct: 241 PFRVNAGP 248


>sp|DHQS_METTH|3-DEHYDROQUINATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 PFEVQVGP 10
PF V GP
Sbjct: 254 PFRVNAGP 261


>sp|TRM1_PYRAE|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum aerophilum

Query: 1 KSPFEVQVG 9
K+PF ++VG
Sbjct: 179 KTPFYIEVG 187


>sp|LYSJ_SACS2|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Saccharolobus

Query: 1 KSPFEVQVGP 10
+ PFE +GP
Sbjct: 141 REPFEPLIGP 150


>sp|DHQS_METM7|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain C7 /

Query: 3 PFEVQVGP 10
PF V GP
Sbjct: 241 PFRVNAGP 248


>sp|DHQS_METM6|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain C6 /

Query: 3 PFEVQVGP 10
PF V GP
Sbjct: 241 PFRVNAGP 248


>sp|DHQS_METMP|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 PFEVQVGP 10
PF V GP
Sbjct: 241 PFRVNAGP 248


>sp|DHQS_METM5|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain C5 /

Query: 3 PFEVQVGP 10
PF V GP
Sbjct: 241 PFRVNAGP 248


>sp|DHQS_METJA|3-DEHYDROQUINATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PFEVQVGP 10
PF V GP
Sbjct: 241 PFRVNAGP 248


>sp|TOP6B_THESM|TYPE 2 DNA topoisomerase 6|Thermococcus sibiricus (strain DSM 12597

Query: 3 PFEVQVG 9
PF+V+VG
Sbjct: 398 PFQVEVG 404


>sp|RL10_SULTO|LARGE ribosomal subunit protein uL10|Sulfurisphaera tokodaii (strain DSM

Query: 1 KSPFEVQV 8
K+PFE+Q+
Sbjct: 94 KNPFEIQL 101


>sp|AATA_HYPBU|A-TYPE ATP synthase subunit A|Hyperthermus butylicus (strain DSM 5456

Query: 2 SPFEVQVGP 10
SP V++GP
Sbjct: 70 SPLSVELGP 78


>sp|TOP6B_PYRAB|TYPE 2 DNA topoisomerase 6|Pyrococcus abyssi (strain GE5 /

Query: 3 PFEVQVG 9
PF+V+VG
Sbjct: 395 PFQVEVG 401


>sp|TOP6B_PYRHO|TYPE 2 DNA topoisomerase 6|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PFEVQVG 9
PF+V+VG
Sbjct: 395 PFQVEVG 401


>sp|TOP6B_THEON|TYPE 2 DNA topoisomerase 6|Thermococcus onnurineus (strain NA1)

Query: 3 PFEVQVG 9
PF+V+VG
Sbjct: 394 PFQVEVG 400


>sp|TOP6B_THEKO|TYPE 2 DNA topoisomerase 6|Thermococcus kodakarensis (strain ATCC

Query: 3 PFEVQVG 9
PF+V+VG
Sbjct: 395 PFQVEVG 401


>sp|TOP6B_THEGJ|TYPE 2 DNA topoisomerase 6|Thermococcus gammatolerans (strain DSM 15229

Query: 3 PFEVQVG 9
PF+V+VG
Sbjct: 394 PFQVEVG 400


>sp|RL11_METVS|LARGE ribosomal subunit protein uL11|Methanococcus vannielii (strain

Query: 1 KSPFEVQVG 9
K FEV+VG
Sbjct: 61 KRTFEVEVG 69


>sp|RL11_METM5|LARGE ribosomal subunit protein uL11|Methanococcus maripaludis (strain

Query: 1 KSPFEVQVG 9
K FEV+VG
Sbjct: 61 KRTFEVEVG 69


>sp|RL11_METM7|LARGE ribosomal subunit protein uL11|Methanococcus maripaludis (strain

Query: 1 KSPFEVQVG 9
K FEV+VG
Sbjct: 61 KRTFEVEVG 69


>sp|RL11_METM6|LARGE ribosomal subunit protein uL11|Methanococcus maripaludis (strain

Query: 1 KSPFEVQVG 9
K FEV+VG
Sbjct: 61 KRTFEVEVG 69


>sp|RL11_METMP|LARGE ribosomal subunit protein uL11|Methanococcus maripaludis (strain

Query: 1 KSPFEVQVG 9
K FEV+VG
Sbjct: 61 KRTFEVEVG 69


>sp|TOP6B_PYRFU|TYPE 2 DNA topoisomerase 6|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PFEVQVG 9
PF+V+VG
Sbjct: 397 PFQVEVG 403




109|Sequence|541|550|VQVGPEAGMQ

>sp|KDPA_HALSA|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Halobacterium salinarum (strain

Query: 1 VQVGPEAGMQ 10
+++GP AG++
Sbjct: 232 IRIGPHAGIE 241


>sp|KDPA_HALS3|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Halobacterium salinarum (strain

Query: 1 VQVGPEAGMQ 10
+++GP AG++
Sbjct: 232 IRIGPHAGIE 241


>sp|ARCS_HALVD|ARCHAEOSINE synthase|Haloferax volcanii (strain ATCC 29605

Query: 2 QVGPEAG 8
Q+GP+AG
Sbjct: 455 QLGPDAG 461


>sp|FRHA_METTH|COENZYME F420 hydrogenase subunit alpha|Methanothermobacter

Query: 1 VQVGPEAGM 9
V+VGP A M
Sbjct: 257 VEVGPRARM 265




110|Sequence|546|555|EAGMQKVRAW

>sp|RS24_METJA|SMALL ribosomal subunit protein eS24|Methanocaldococcus jannaschii

Query: 1 EAGMQKVRAW 10
EAGMQ+ R +
Sbjct: 58 EAGMQRARGY 67


>sp|RFCL_PYRHO|REPLICATION factor C large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EAGMQKVRAW 10
E ++KVRAW
Sbjct: 22 EQALEKVRAW 31


>sp|DHYS2_ARCFU|PROBABLE deoxyhypusine synthase 2|Archaeoglobus fulgidus (strain ATCC

Query: 2 AGMQKVRAW 10
AGM+K+ AW
Sbjct: 40 AGMRKIIAW 48


>sp|RFCL_PYRFU|REPLICATION factor C large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EAGMQKVRAW 10
E ++KVRAW
Sbjct: 22 EEAIEKVRAW 31


>sp|ARGC_METPE|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 AGMQKVRA 9
AGMQ VRA
Sbjct: 77 AGMQYVRA 84


>sp|TRPC_METTH|INDOLE-3-GLYCEROL phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 1 EAGMQKVR 8
EAG+QK R
Sbjct: 142 EAGIQKCR 149




111|Sequence|551|560|KVRAWGPGLH

>sp|ATGT_THEAC|TRNA-GUANINE(15) transglycosylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 RAWGPG 8
RAW PG
Sbjct: 395 RAWNPG 400


>sp|THII_THEKO|PROBABLE tRNA sulfurtransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 KVRAWG 6
K+RAWG
Sbjct: 168 KIRAWG 173


>sp|THSB_ARCFU|THERMOSOME subunit beta|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KVRAWGPGL 9
K+R W P L
Sbjct: 421 KLREWAPSL 429


>sp|GLGB_PICTO|1,4-ALPHA-GLUCAN branching enzyme GlgB|Picrophilus torridus (strain ATCC 700027

Query: 5 WGPGLH 10
W PG+H
Sbjct: 153 WTPGMH 158


>sp|THSA_ARCFU|THERMOSOME subunit alpha|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KVRAWGPGL 9
K+R W P L
Sbjct: 421 KIRDWAPTL 429


>sp|RTCB_ARCFU|TRNA-SPLICING ligase RtcB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VRAWGPGL 9
RA+GPGL
Sbjct: 355 TRAFGPGL 362


>sp|HSPS_METJA|SMALL heat shock protein HSP16.5|Methanocaldococcus jannaschii (strain

Query: 1 KVRAWGPGLH 10
KV AW PG++
Sbjct: 55 KVIAWLPGVN 64


>sp|MTD_METMJ|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanoculleus

Query: 2 VRAWGP 7
++AWGP
Sbjct: 55 MKAWGP 60


>sp|MTD_METHJ|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanospirillum

Query: 2 VRAWGP 7
++AWGP
Sbjct: 55 MKAWGP 60


>sp|SYC_AERPE|CYSTEINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 VRAWGPG 8
+R WGPG
Sbjct: 279 LREWGPG 285


>sp|RL4_METTP|LARGE ribosomal subunit protein uL4|Methanothrix thermoacetophila

Query: 3 RAWGPG 8
R+WGPG
Sbjct: 59 RSWGPG 64


>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KVRAWGPG 8
K R+WG G
Sbjct: 980 KPRSWGEG 987


>sp|SYC_THEAC|CYSTEINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 WGPG 8
WGPG
Sbjct: 196 WGPG 199


>sp|MDH_SULTO|MALATE dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 WGPG 8
WGPG
Sbjct: 221 WGPG 224


>sp|MDH_SULAC|MALATE dehydrogenase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 WGPG 8
WGPG
Sbjct: 221 WGPG 224


>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KVRAWGPG 8
K R+WG G
Sbjct: 998 KPRSWGDG 1005


>sp|MDH_PYRIL|MALATE dehydrogenase|Pyrobaculum islandicum (strain DSM 4184

Query: 5 WGPG 8
WGPG
Sbjct: 224 WGPG 227


>sp|SERK_DESA1|ATP-DEPENDENT L-serine kinase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 KVRAWGPGL 9
K++ W PG+
Sbjct: 104 KLKTWLPGI 112


>sp|Y1488_PYRFU|UPF0128 protein PF1488|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VRAWGPGLH 10
++AWG LH
Sbjct: 25 LKAWGYDLH 33


>sp|Y1314_PYRHO|UPF0128 protein PH1314|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VRAWGPGLH 10
++AWG LH
Sbjct: 28 LKAWGYDLH 36


>sp|MDH_PYRCJ|MALATE dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 WGPG 8
WGPG
Sbjct: 224 WGPG 227


>sp|Y832_PYRAB|UPF0128 protein PYRAB08320|Pyrococcus abyssi (strain GE5 /

Query: 2 VRAWGPGLH 10
++AWG LH
Sbjct: 25 LKAWGYDLH 33


>sp|Y1402_METJA|UNCHARACTERIZED protein MJ1402|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 AWGPGL 9
AWG GL
Sbjct: 33 AWGSGL 38


>sp|Y2294_THEKO|UPF0128 protein TK2294|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VRAWGPGLH 10
++AWG LH
Sbjct: 25 LKAWGYDLH 33


>sp|SERK_DESM0|ATP-DEPENDENT L-serine kinase|Desulfurococcus mucosus (strain ATCC 35584

Query: 1 KVRAWGPGL 9
K++ W PG+
Sbjct: 104 KLKTWLPGI 112


>sp|PELO_CENSY|PROTEIN pelota homolog|Cenarchaeum symbiosum (strain A)

Query: 3 RAWGPG 8
+ WGPG
Sbjct: 111 KDWGPG 116


>sp|MDH_PYRAE|MALATE dehydrogenase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 WGPG 8
WGPG
Sbjct: 224 WGPG 227


>sp|CCA_METKA|CCA-ADDING enzyme|Methanopyrus kandleri (strain AV19 /

Query: 2 VRAWGPGL 9
VR W PG
Sbjct: 205 VRTWRPGF 212


>sp|SYC_THEPD|CYSTEINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 5 WGPG 8
WGPG
Sbjct: 195 WGPG 198


>sp|FLPA_HALLT|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Halorubrum lacusprofundi (strain

Query: 3 RAWGPG 8
RAW PG
Sbjct: 38 RAWDPG 43


>sp|Y1266_METJA|UNCHARACTERIZED protein MJ1266|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 AWGPGL 9
AWG GL
Sbjct: 188 AWGDGL 193




112|Sequence|556|565|GPGLHGGIVG

>sp|AATA_SULAC|A-TYPE ATP synthase subunit A|Sulfolobus acidocaldarius (strain ATCC

Query: 1 GPGLHGGI 8
GPGL GGI
Sbjct: 77 GPGLMGGI 84


>sp|Y1551_METVS|UPF0285 protein Mevan_1551|Methanococcus vannielii (strain ATCC 35089

Query: 2 PGLHGGI 8
PGLH GI
Sbjct: 110 PGLHKGI 116


>sp|Y642_METMP|UPF0285 protein MMP0642|Methanococcus maripaludis (strain DSM 14266

Query: 2 PGLHGGI 8
PGLH G+
Sbjct: 110 PGLHNGV 116


>sp|Y535_METJA|UNCHARACTERIZED protein MJ0535|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PGLHGGIVG 10
PG H GI G
Sbjct: 121 PGHHAGISG 129


>sp|SRP54_NATPD|SIGNAL recognition particle 54 kDa|Natronomonas pharaonis (strain ATCC

Query: 2 PGLHGGI 8
PGL GGI
Sbjct: 350 PGLGGGI 356


>sp|GATA_METM7|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C7 /

Query: 2 PGLHGGIVG 10
P H GIVG
Sbjct: 158 PASHCGIVG 166


>sp|GATA_METM6|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C6 /

Query: 2 PGLHGGIVG 10
P H GIVG
Sbjct: 158 PASHCGIVG 166


>sp|Y1507_METJA|UNCHARACTERIZED ABC transporter permease MJ1507|Methanocaldococcus jannaschii

Query: 3 GLHGGIVG 10
GL GGIVG
Sbjct: 326 GLFGGIVG 333


>sp|GATA_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C5 /

Query: 2 PGLHGGIVG 10
P H GIVG
Sbjct: 158 PASHCGIVG 166


>sp|Y1253_SACS2|PUTATIVE esterase SSO1253|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 LHGGIV 9
LHGG+V
Sbjct: 57 LHGGVV 62


>sp|Y1370_METJA|UPF0285 protein MJ1370|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PGLHGGI 8
PGLH GI
Sbjct: 109 PGLHRGI 115


>sp|GUAAB_THEAC|GMP synthase [glutamine-hydrolyzing] subunit B|Thermoplasma acidophilum

Query: 1 GPGLHGGIVG 10
GPGL IVG
Sbjct: 189 GPGLAVRIVG 198


>sp|GUAAB_METTH|GMP synthase [glutamine-hydrolyzing] subunit B|Methanothermobacter

Query: 1 GPGLHGGIVG 10
GPGL IVG
Sbjct: 188 GPGLAVRIVG 197


>sp|Y247_METM6|UPF0285 protein MmarC6_0247|Methanococcus maripaludis (strain C6 /

Query: 2 PGLHGGI 8
PGLH G+
Sbjct: 110 PGLHKGV 116


>sp|GATA_METMP|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain DSM

Query: 2 PGLHGGIVG 10
P H GIVG
Sbjct: 158 PASHCGIVG 166


>sp|Y1666_METM7|UPF0285 protein MmarC7_1666|Methanococcus maripaludis (strain C7 /

Query: 2 PGLHGGI 8
PGLH G+
Sbjct: 110 PGLHKGV 116


>sp|CRTD_HALJT|CAROTENOID 3,4-desaturase|Haloarcula japonica (strain ATCC 49778

Query: 1 GPGLHGG 7
PGLH G
Sbjct: 383 APGLHDG 389


>sp|HMGCS_THESM|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus sibiricus (strain DSM 12597

Query: 2 PGLHGGIVG 10
PGL GI+G
Sbjct: 262 PGLLSGIIG 270


>sp|HMGCS_THEKO|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 PGLHGGIVG 10
PGL GI+G
Sbjct: 262 PGLLSGIIG 270


>sp|GUAAB_HALLT|GMP synthase [glutamine-hydrolyzing] subunit B|Halorubrum lacusprofundi

Query: 1 GPGLHGGIVG 10
GPGL IVG
Sbjct: 190 GPGLAVRIVG 199


>sp|SRP54_HALMA|SIGNAL recognition particle 54 kDa|Haloarcula marismortui (strain ATCC

Query: 2 PGLHGGIV 9
PGL GG++
Sbjct: 352 PGLGGGLM 359


>sp|Y2140_SACS2|PUTATIVE esterase SSO2140|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GPGLHGGIV 9
G LHGGI+
Sbjct: 48 GGVLHGGII 56


>sp|GUAAB_ARCFU|GMP synthase [glutamine-hydrolyzing] subunit B|Archaeoglobus fulgidus

Query: 1 GPGLHGGIVG 10
GPGL IVG
Sbjct: 188 GPGLAVRIVG 197


>sp|Y1421_METMJ|UPF0173 metal-dependent hydrolase Memar_1421|Methanoculleus marisnigri

Query: 1 GPGLHGGIVG 10
GPG +GG+
Sbjct: 105 GPGFYGGVAA 114


>sp|GUAAB_METBU|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcoides

Query: 1 GPGLHGGIVG 10
GPGL I+G
Sbjct: 188 GPGLSVRIIG 197


>sp|CSG_METMA|MAJOR S-layer protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PGLHGGIVG 10
PG G ++G
Sbjct: 82 PGTEGNVIG 90


>sp|Y3856_METAC|UPF0285 protein MA_3856|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PGLHGG 7
PGLH G
Sbjct: 114 PGLHSG 119


>sp|GCSPA_METS5|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Metallosphaera

Query: 3 GLHGGI 8
G+HGG+
Sbjct: 411 GIHGGL 416


>sp|FER_ACIAM|ZINC-CONTAINING ferredoxin|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 3 GLHGGIVG 10
G+HG IVG
Sbjct: 32 GIHGTIVG 39


>sp|FER1_SULTO|ZINC-CONTAINING ferredoxin-1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GLHGGIVG 10
G+HG IVG
Sbjct: 33 GIHGTIVG 40


>sp|FERA_SULME|ZINC-CONTAINING ferredoxin A|Sulfuracidifex metallicus (Sulfolobus metallicus)

Query: 3 GLHGGIVG 10
G+HG IVG
Sbjct: 32 GIHGAIVG 39




113|Sequence|561|570|GGIVGRSADF

>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 1 GGIVGRSADF 10
GGIVGR F
Sbjct: 799 GGIVGRIIGF 808


>sp|TRPG_HALSA|ANTHRANILATE synthase component 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 GGIVGRSAD 9
GG VGR+A+
Sbjct: 98 GGTVGRAAE 106


>sp|SRP54_METBU|SIGNAL recognition particle 54 kDa|Methanococcoides burtonii (strain DSM

Query: 3 IVGRSAD 9
IVGRSAD
Sbjct: 86 IVGRSAD 92


>sp|DHE2_PYRCJ|NAD(+)-DEPENDENT glutamate dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GGIVGRSA 8
GGIVG++A
Sbjct: 210 GGIVGKTA 217


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 1 GGIVGRSADF 10
GG+VGR F
Sbjct: 805 GGVVGRIIGF 814


>sp|GATE_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Archaeoglobus fulgidus (strain ATCC

Query: 1 GGIVGR 6
GGIVGR
Sbjct: 308 GGIVGR 313


>sp|AATE2_METHJ|A-TYPE ATP synthase subunit E|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GGIVGRSAD 9
GG+ G SAD
Sbjct: 155 GGLSGTSAD 163


>sp|SYFB_METS5|PHENYLALANINE--TRNA ligase beta subunit|Metallosphaera sedula (strain ATCC 51363

Query: 1 GGIVGR 6
GGI+GR
Sbjct: 249 GGIIGR 254


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 GGIVGRSADF 10
GG+VGR F
Sbjct: 800 GGVVGRIIGF 809


>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GGIVGRSADF 10
G I+G+ DF
Sbjct: 88 GAIIGKYPDF 97


>sp|FPOL_METMA|F(420)H(2) dehydrogenase subunit L|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GGIVGRSADF 10
GG VG+S F
Sbjct: 242 GGAVGKSGQF 251


>sp|ADH_SACS2|NAD-DEPENDENT alcohol dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GGIVGRSADF 10
G +VG +DF
Sbjct: 293 GSLVGNQSDF 302


>sp|ADH_SULSR|NAD-DEPENDENT alcohol dehydrogenase|Sulfolobus sp. (strain RC3)

Query: 1 GGIVGRSADF 10
G +VG +DF
Sbjct: 293 GSLVGNQSDF 302




114|Sequence|566|575|RSADFVVESI

>sp|ARLY_ARCFU|ARGININOSUCCINATE lyase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SADFVVESI 10
S DFV+ESI
Sbjct: 223 SRDFVIESI 231


>sp|TRMY_PYRAE|TRNA (pseudouridine(54)-N(1))-methyltransferase|Pyrobaculum aerophilum

Query: 4 DFVVESI 10
DFV+ESI
Sbjct: 10 DFVIESI 16


>sp|TRUD_PYRIL|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum islandicum (strain DSM

Query: 1 RSADFVVESI 10
R DF+VE +
Sbjct: 30 RPEDFIVEEV 39


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 RSADFVVE 8
+ ADF+VE
Sbjct: 557 KKADFIVE 564




115|Sequence|571|580|VVESIGSEVG

>sp|UPPS_HALSA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Halobacterium

Query: 1 VVESIGSEVG 10
+V ++GSEVG
Sbjct: 265 LVRALGSEVG 274


>sp|TRPG_METJA|ANTHRANILATE synthase component 2|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VVESIGSEVG 10
+VE+ G EVG
Sbjct: 86 IVEAFGGEVG 95


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 SIGSEVG 10
S+GSEVG
Sbjct: 862 SVGSEVG 868


>sp|MCRA_METVA|METHYL-COENZYME M reductase subunit alpha|Methanococcus vannielii

Query: 1 VVESIGSEV 9
VVE I SEV
Sbjct: 372 VVEDIASEV 380


>sp|Y657_METMP|UPF0237 protein MMP0657|Methanococcus maripaludis (strain DSM 14266

Query: 2 VESIGSEVG 10
+E +GSE+G
Sbjct: 65 LEKLGSEIG 73


>sp|MCRA_METVO|METHYL-COENZYME M reductase subunit alpha|Methanococcus voltae

Query: 1 VVESIGSEV 9
VVE I SEV
Sbjct: 373 VVEDIASEV 381




116|Sequence|576|585|GSEVGSLGFA

>sp|PRIL_METBU|DNA primase large subunit PriL|Methanococcoides burtonii (strain DSM

Query: 4 VGSLGFA 10
VGSLGF+
Sbjct: 19 VGSLGFS 25


>sp|CCA_PICTO|CCA-ADDING enzyme|Picrophilus torridus (strain ATCC 700027

Query: 1 GSEVGSLGFA 10
GSEV GF+
Sbjct: 165 GSEVSKAGFS 174


>sp|RL3_THEON|LARGE ribosomal subunit protein uL3|Thermococcus onnurineus (strain

Query: 2 SEVGSLGFA 10
SEV LGFA
Sbjct: 34 SEVRMLGFA 42


>sp|RL3_THEKO|LARGE ribosomal subunit protein uL3|Thermococcus kodakarensis (strain

Query: 2 SEVGSLGFA 10
SEV LGFA
Sbjct: 34 SEVRMLGFA 42


>sp|RL3_THEGJ|LARGE ribosomal subunit protein uL3|Thermococcus gammatolerans (strain

Query: 2 SEVGSLGFA 10
SEV LGFA
Sbjct: 34 SEVRMLGFA 42


>sp|KHSE_PYRCJ|HOMOSERINE kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 EVGSLGFA 10
E G+LGFA
Sbjct: 240 EAGALGFA 247


>sp|TSGAD_HALVD|PUTATIVE ABC transporter glucose-binding protein|Haloferax volcanii

Query: 2 SEVGSLGFA 10
SE+G LG++
Sbjct: 81 SEIGDLGWS 89




117|Sequence|581|590|SLGFAIEGPS

>sp|SYFB_THEVO|PHENYLALANINE--TRNA ligase beta subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 3 GFAIEGPS 10
GF EGPS
Sbjct: 97 GFVAEGPS 104


>sp|G3P_PYRAB|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 1 SLGFAIEG 8
S+GF +EG
Sbjct: 64 SVGFEVEG 71


>sp|NAH1_METJA|NA(+)/H(+) antiporter 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SLGFAIEGP 9
L FA+EGP
Sbjct: 338 KLYFALEGP 346


>sp|MUTS1_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 1 SLGFAIEGP 9
SLG A +GP
Sbjct: 214 SLGVAADGP 222


>sp|MUTS1_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 1 SLGFAIEGP 9
SLG A +GP
Sbjct: 214 SLGVAADGP 222


>sp|KHSE_METKA|HOMOSERINE kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 SLGFAIEG 8
+LGFAI G
Sbjct: 248 ALGFAISG 255


>sp|SURE_HALMA|5'-NUCLEOTIDASE SurE|Haloarcula marismortui (strain ATCC 43049

Query: 2 LGFAIEG 8
LG+A+EG
Sbjct: 59 LGYAVEG 65




118|Sequence|586|595|IEGPSQAKIE

>sp|IORA_PYRAB|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus abyssi (strain GE5 /

Query: 1 IEGPSQAKI 9
IEGP AK+
Sbjct: 245 IEGPEDAKV 253


>sp|IORA_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus horikoshii (strain ATCC

Query: 1 IEGPSQAKI 9
IEGP AK+
Sbjct: 245 IEGPEDAKV 253


>sp|IF2P_PYRAR|PROBABLE translation initiation factor IF-2|Pyrobaculum arsenaticum (strain

Query: 1 IEGPSQAKI 9
+EGP +AK+
Sbjct: 272 LEGPKEAKV 280


>sp|BACR_HALSA|BACTERIORHODOPSIN salinarum (strain ATCC 700922

Query: 1 IEGPSQAKI 9
+EG SQA+I
Sbjct: 9 VEGVSQAQI 17


>sp|DNAG_METMA|DNA primase DnaG|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GPSQAKIE 10
GP AKIE
Sbjct: 96 GPCSAKIE 103


>sp|DNAG_METBF|DNA primase DnaG|Methanosarcina barkeri (strain Fusaro /

Query: 3 GPSQAKIE 10
GP AKIE
Sbjct: 96 GPCSAKIE 103


>sp|DNAG_METAC|DNA primase DnaG|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 GPSQAKIE 10
GP AKIE
Sbjct: 96 GPCSAKIE 103


>sp|DNAG_THEVO|DNA primase DnaG|Thermoplasma volcanium (strain ATCC 51530

Query: 3 GPSQAKIE 10
GP +AK+E
Sbjct: 111 GPCKAKVE 118


>sp|DNAG_THEON|DNA primase DnaG|Thermococcus onnurineus (strain NA1)

Query: 3 GPSQAKIE 10
GP++AKI+
Sbjct: 125 GPAEAKIK 132




119|Sequence|591|600|QAKIEYNDQN

>sp|RS4_PICTO|SMALL ribosomal subunit protein uS4|Picrophilus torridus (strain ATCC

Query: 1 QAKIEYND 8
QAK+ YND
Sbjct: 59 QAKLRYND 66


>sp|RNZ_SACI7|RIBONUCLEASE Z|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 6 YNDQN 10
YNDQN
Sbjct: 119 YNDQN 123


>sp|RNZ_SACI6|RIBONUCLEASE Z|Saccharolobus islandicus (strain M.16.4 /

Query: 6 YNDQN 10
YNDQN
Sbjct: 119 YNDQN 123


>sp|RNZ_SACI4|RIBONUCLEASE Z|Saccharolobus islandicus (strain M.14.25 /

Query: 6 YNDQN 10
YNDQN
Sbjct: 119 YNDQN 123


>sp|RNZ_SACI3|RIBONUCLEASE Z|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 6 YNDQN 10
YNDQN
Sbjct: 119 YNDQN 123


>sp|RNZ_SACI2|RIBONUCLEASE Z|Saccharolobus islandicus (strain L.S.2.15 /

Query: 6 YNDQN 10
YNDQN
Sbjct: 119 YNDQN 123


>sp|RNZ_SACI1|RIBONUCLEASE Z|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 6 YNDQN 10
YNDQN
Sbjct: 119 YNDQN 123


>sp|F16PA_METHJ|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 IEYNDQN 10
IEY DQN
Sbjct: 209 IEYFDQN 215


>sp|RRP42_THEGJ|EXOSOME complex component Rrp42|Thermococcus gammatolerans (strain DSM

Query: 3 KIEYNDQ 9
K+EYN++
Sbjct: 168 KVEYNEE 174


>sp|RRP42_PYRHO|EXOSOME complex component Rrp42|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 KIEYNDQ 9
K+EYN++
Sbjct: 168 KVEYNEE 174


>sp|T1RH_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 2 AKIEYND 8
AKIEY D
Sbjct: 873 AKIEYKD 879


>sp|CUTA_SULAC|GLYCERALDEHYDE dehydrogenase large chain|Sulfolobus acidocaldarius (strain ATCC

Query: 2 AKIEYND 8
AK+EYN+
Sbjct: 422 AKLEYNE 428




120|Sequence|596|605|YNDQNDGSCD

>sp|DNLI_THEAC|DNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YNDQND 6
YND+ND
Sbjct: 463 YNDKND 468


>sp|NFI_THEVO|BIFUNCTIONAL methyltransferase/endonuclease|Thermoplasma volcanium (strain ATCC

Query: 1 YNDQNDGSCD 10
Y+D+ND S D
Sbjct: 130 YDDRNDYSLD 139


>sp|MTAP_PYRAE|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 YNDQNDGSC 9
YN +DG C
Sbjct: 165 YNRTHDGGC 173


>sp|Y1674_SULAC|UNCHARACTERIZED protein Saci_1674|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 NDQNDGSCD 10
N NDG CD
Sbjct: 91 NRFNDGKCD 99


>sp|FLAB2_THEKO|FLAGELLIN B2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 YNDQNDGSCD 10
YND N G+ D
Sbjct: 316 YNDPNSGTGD 325


>sp|HIS8_SULTO|HISTIDINOL-PHOSPHATE aminotransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YNDQNDG 7
+ND NDG
Sbjct: 23 FNDINDG 29


>sp|NADE_THEVO|NH(3)-DEPENDENT NAD(+) synthetase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YNDQNDGSCD 10
Y DG CD
Sbjct: 140 YTKYGDGGCD 149




121|Sequence|601|610|DGSCDVKYWP

>sp|GCSPB_THEVO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 2 GSCDVKYWP 10
GSC +KY P
Sbjct: 74 GSCTMKYNP 82


>sp|GCSPB_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 2 GSCDVKYWP 10
GSC +KY P
Sbjct: 78 GSCTMKYNP 86


>sp|GCSPB_THEKO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 2 GSCDVKYWP 10
GSC +KY P
Sbjct: 78 GSCTMKYNP 86


>sp|GCSPB_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 2 GSCDVKYWP 10
GSC +KY P
Sbjct: 78 GSCTMKYNP 86


>sp|GCSPB_THEAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 2 GSCDVKYWP 10
GSC +KY P
Sbjct: 74 GSCTMKYNP 82


>sp|GCSPB_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 2 GSCDVKYWP 10
GSC +KY P
Sbjct: 81 GSCTMKYNP 89


>sp|GCSPB_SACS2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 GSCDVKYWP 10
GSC +KY P
Sbjct: 84 GSCTMKYNP 92


>sp|GCSPB_SACI7|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 GSCDVKYWP 10
GSC +KY P
Sbjct: 85 GSCTMKYNP 93


>sp|GCSPB_SACI6|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 GSCDVKYWP 10
GSC +KY P
Sbjct: 85 GSCTMKYNP 93


>sp|GCSPB_SACI4|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 GSCDVKYWP 10
GSC +KY P
Sbjct: 85 GSCTMKYNP 93


>sp|GCSPB_SACI3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 GSCDVKYWP 10
GSC +KY P
Sbjct: 85 GSCTMKYNP 93


>sp|GCSPB_SACI2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 GSCDVKYWP 10
GSC +KY P
Sbjct: 85 GSCTMKYNP 93


>sp|GCSPB_SACI1|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 GSCDVKYWP 10
GSC +KY P
Sbjct: 85 GSCTMKYNP 93


>sp|GCSPB_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 2 GSCDVKYWP 10
GSC +KY P
Sbjct: 78 GSCTMKYNP 86


>sp|GCSPB_PYRFU|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 2 GSCDVKYWP 10
GSC +KY P
Sbjct: 78 GSCTMKYNP 86


>sp|GCSPB_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 2 GSCDVKYWP 10
GSC +KY P
Sbjct: 78 GSCTMKYNP 86


>sp|GCSPB_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 2 GSCDVKYWP 10
GSC +KY P
Sbjct: 83 GSCTMKYNP 91


>sp|GCSPB_STAMF|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Staphylothermus

Query: 2 GSCDVKYWP 10
GSC +KY P
Sbjct: 83 GSCTMKYNP 91


>sp|NADB_SULTO|L-ASPARTATE oxidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DGSCDVK 7
DG CDVK
Sbjct: 66 DGLCDVK 72


>sp|GCSPB_HALSA|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Halobacterium

Query: 2 GSCDVKYWP 10
GSC +KY P
Sbjct: 76 GSCTMKYNP 84


>sp|MTRC_METVS|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus vannielii (strain ATCC

Query: 3 SCDVKYWP 10
+C+VKY P
Sbjct: 256 ACEVKYVP 263


>sp|MTRC_METMP|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus maripaludis (strain DSM

Query: 3 SCDVKYWP 10
+C+VKY P
Sbjct: 249 ACEVKYVP 256


>sp|MTRC_METM7|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus maripaludis (strain C7

Query: 3 SCDVKYWP 10
+C+VKY P
Sbjct: 249 ACEVKYVP 256


>sp|MTRC_METM5|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus maripaludis (strain C5

Query: 3 SCDVKYWP 10
+C+VKY P
Sbjct: 249 ACEVKYVP 256


>sp|CAS1C_METRM|CRISPR-ASSOCIATED protein Cas1 3|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 1 DGSCDVKYW 9
+GS V YW
Sbjct: 165 EGSASVDYW 173


>sp|NADE_THEAC|NH(3)-DEPENDENT NAD(+) synthetase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DGSCDVK 7
DG CDV+
Sbjct: 145 DGGCDVE 151


>sp|NADE_METKA|NH(3)-DEPENDENT NAD(+) synthetase|Methanopyrus kandleri (strain AV19 /

Query: 1 DGSCDV 6
DG+CDV
Sbjct: 163 DGACDV 168


>sp|IDI2_METTH|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanothermobacter thermautotrophicus (strain

Query: 2 GSCDVKY 8
SCDV+Y
Sbjct: 14 ASCDVEY 20


>sp|NADE_THEVO|NH(3)-DEPENDENT NAD(+) synthetase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DGSCDVK 7
DG CDV+
Sbjct: 145 DGGCDVE 151


>sp|GLNA_METMP|GLUTAMINE synthetase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DGSCDVK 7
DG CD++
Sbjct: 166 DGGCDIR 172


>sp|PCKG_SULTO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DGSCDVKYWP 10
+GS DV Y P
Sbjct: 507 EGSVDVIYTP 516


>sp|NADE_PICTO|NH(3)-DEPENDENT NAD(+) synthetase|Picrophilus torridus (strain ATCC 700027

Query: 1 DGSCDVK 7
DG+CD++
Sbjct: 146 DGACDLE 152


>sp|SYE_NATPD|GLUTAMATE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DGSCDVKYW 9
DG+ DV +W
Sbjct: 503 DGAVDVVHW 511


>sp|RAMA_METBA|[CO(II) methylated amine-specific corrinoid protein]|Methanosarcina barkeri

Query: 4 CDVKYW 9
C++ YW
Sbjct: 412 CELSYW 417


>sp|TOP1_METJA|DNA topoisomerase 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CDVKY 8
CDVKY
Sbjct: 626 CDVKY 630




122|Sequence|606|615|VKYWPKEPGE

>sp|TRF3_THEAC|TRICORN protease-interacting factor F3|Thermoplasma acidophilum (strain

Query: 1 VKYWPKEPG 9
++YW K PG
Sbjct: 407 MEYWIKNPG 415


>sp|RS6E_METBF|SMALL ribosomal subunit protein eS6|Methanosarcina barkeri (strain

Query: 1 VKYWPKEPGE 10
V Y PK PG+
Sbjct: 81 VGYTPKHPGQ 90


>sp|YC4B_METJA|UNCHARACTERIZED protein MJ1249.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VKYWPKE 7
+KY+PKE
Sbjct: 155 IKYYPKE 161


>sp|TRF2_THEAC|TRICORN protease-interacting factor F2|Thermoplasma acidophilum (strain

Query: 1 VKYWPKEPG 9
++YW K PG
Sbjct: 413 MEYWIKNPG 421


>sp|Y1993_ARCFU|UNCHARACTERIZED protein AF_1993|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VKYWPKEPGE 10
V Y P PGE
Sbjct: 103 VNYAPPNPGE 112


>sp|ARCSA_THEKO|ARCHAEOSINE synthase subunit alpha|Thermococcus kodakarensis (strain ATCC

Query: 3 YWPKEPGE 10
+ PKEPGE
Sbjct: 41 FHPKEPGE 48


>sp|IF6_NANEQ|TRANSLATION initiation factor 6|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 YWPKE 7
YWPK+
Sbjct: 106 YWPKK 110


>sp|FAU1_THEPD|PROBABLE ribonuclease FAU-1|Thermofilum pendens (strain DSM 2475

Query: 5 PKEPG 9
PKEPG
Sbjct: 225 PKEPG 229


>sp|TATCT_HALVD|SEC-INDEPENDENT protein translocase protein TatCt|Haloferax volcanii (strain ATCC

Query: 4 WPKEP 8
WPK P
Sbjct: 117 WPKSP 121


>sp|Y2966_METMA|UPF0282 protein MM_2966|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VKYWPKEPG 9
V++W K PG
Sbjct: 100 VRFWCKGPG 108


>sp|Y1342_METJA|UNCHARACTERIZED protein MJ1342|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VKYWPKEPGE 10
KY PK+ GE
Sbjct: 56 CKYCPKQIGE 65


>sp|HERA_PYRFU|DNA double-strand break repair helicase|Pyrococcus furiosus (strain

Query: 1 VKYWPKEPG 9
+KYW ++ G
Sbjct: 275 IKYWSEKEG 283


>sp|AMPD_ARCFU|ANHYDROMEVALONATE phosphate decarboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VKYWPKEPG 9
+KY+P++ G
Sbjct: 123 IKYFPRDGG 131


>sp|RS6E_METMA|SMALL ribosomal subunit protein eS6|Methanosarcina mazei (strain ATCC

Query: 1 VKYWPKEPGE 10
V Y PK PG+
Sbjct: 81 VGYVPKLPGQ 90


>sp|RS6E_METAC|SMALL ribosomal subunit protein eS6|Methanosarcina acetivorans (strain

Query: 1 VKYWPKEPGE 10
V Y PK PG+
Sbjct: 81 VGYVPKLPGQ 90


>sp|DMD_SACS2|DIPHOSPHOMEVALONATE decarboxylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VKYWPKEPGE 10
VKYW K E
Sbjct: 16 VKYWGKRGDE 25


>sp|Y209_ARCFU|UNCHARACTERIZED protein AF_0209|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VKYWPKEPG 9
+K WPK+ G
Sbjct: 137 LKCWPKDAG 145


>sp|AROD_AERPE|3-DEHYDROQUINATE dehydratase|Aeropyrum pernix (strain ATCC 700893

Query: 1 VKYWPKEPGE 10
+ ++P +PGE
Sbjct: 35 LDFYPGDPGE 44


>sp|RFCL_METAR|REPLICATION factor C large subunit|Methanocella arvoryzae (strain DSM 22066

Query: 5 PKEPGE 10
P+EPGE
Sbjct: 498 PEEPGE 503


>sp|AMPD_PYRHO|ANHYDROMEVALONATE phosphate decarboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KYWPKEPG 9
KY+PK+ G
Sbjct: 111 KYYPKDGG 118


>sp|Y1357_DESA1|MEMO1 family protein DKAM_1357|Desulfurococcus amylolyticus (strain DSM

Query: 3 YWPKEPGE 10
++P +PGE
Sbjct: 12 FYPDKPGE 19




123|Sequence|611|620|KEPGEYAVHI

>sp|HPRT_METPE|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanosphaerula palustris (strain ATCC

Query: 1 KEPGEYAVH 9
K PGE AVH
Sbjct: 89 KLPGEVAVH 97


>sp|ARCSA_THEKO|ARCHAEOSINE synthase subunit alpha|Thermococcus kodakarensis (strain ATCC

Query: 1 KEPGEYAVHI 10
KEPGEY ++
Sbjct: 44 KEPGEYDFNL 53


>sp|CBID_METMP|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 3 PGEYAVH 9
PGEYA++
Sbjct: 123 PGEYAIN 129


>sp|REG9_PYRAB|UNCHARACTERIZED HTH-type transcriptional regulator PYRAB16920|Pyrococcus abyssi

Query: 1 KEPGEYAVHI 10
K PG Y VHI
Sbjct: 92 KIPGVYEVHI 101


>sp|HPRT_METAR|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanocella arvoryzae (strain DSM

Query: 3 PGEYAVH 9
PGE AVH
Sbjct: 90 PGEIAVH 96


>sp|GCSPA_SULAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfolobus

Query: 1 KEPGEYAVHI 10
K PGEY + I
Sbjct: 254 KPPGEYGIDI 263


>sp|Y540_ARCFU|UNCHARACTERIZED protein AF_0540|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PGEYAVHI 10
PGEY + I
Sbjct: 50 PGEYGIKI 57


>sp|HPRT_METPS|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanocella paludicola (strain DSM

Query: 3 PGEYAVH 9
PGE AVH
Sbjct: 90 PGEIAVH 96


>sp|SPT4_THEKO|TRANSCRIPTION elongation factor Spt4|Thermococcus kodakarensis (strain ATCC

Query: 1 KEPGEYAVHI 10
K PG+YA+ +
Sbjct: 57 KVPGKYAIRV 66


>sp|HPRT_METTM|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanothermobacter marburgensis

Query: 3 PGEYAVH 9
PGE AVH
Sbjct: 93 PGEVAVH 99


>sp|REG9_PYRFU|UNCHARACTERIZED HTH-type transcriptional regulator PF0250|Pyrococcus furiosus

Query: 1 KEPGEYAVHI 10
K PG Y VHI
Sbjct: 92 KIPGVYEVHI 101


>sp|Y1225_ARCFU|UNCHARACTERIZED protein AF_1225|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PGEYAVHI 10
PGEY V I
Sbjct: 52 PGEYEVKI 59


>sp|HPRT_METTH|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanothermobacter thermautotrophicus

Query: 3 PGEYAVH 9
PGE AVH
Sbjct: 90 PGEVAVH 96


>sp|FAU1_PYRHO|PROBABLE ribonuclease FAU-1|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 EPGEYAV 8
EPG+YA+
Sbjct: 371 EPGDYAI 377


Query: 3 PGEYAVHI 10
PG+YAV I
Sbjct: 152 PGDYAVLI 159


>sp|FAU1_PYRAB|PROBABLE ribonuclease FAU-1|Pyrococcus abyssi (strain GE5 /

Query: 2 EPGEYAV 8
EPG+YA+
Sbjct: 371 EPGDYAI 377


Query: 3 PGEYAVHI 10
PG+YAV I
Sbjct: 152 PGDYAVLI 159


>sp|SYL_HALSA|LEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 EPGEYAVHI 10
EPG A+H+
Sbjct: 872 EPGRPAIHV 880


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 2 EPGEYAV 8
EPG+Y V
Sbjct: 8056 EPGDYVV 8062


>sp|GCSPA_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 1 KEPGEYAVHI 10
K PGEY + I
Sbjct: 254 KPPGEYEIDI 263


>sp|SPT4_PYRFU|TRANSCRIPTION elongation factor Spt4|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KEPGEYAVHI 10
K PG+YA+ +
Sbjct: 51 KVPGKYAIRV 60


>sp|GCSPA_THEAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 KEPGEYAVHI 10
K PGEY I
Sbjct: 238 KPPGEYGSDI 247


>sp|HIS1_HALSA|ATP phosphoribosyltransferase|Halobacterium salinarum (strain ATCC

Query: 2 EPGEYAVH 9
EPG AVH
Sbjct: 242 EPGTVAVH 249


>sp|HIS1_HALS3|ATP phosphoribosyltransferase|Halobacterium salinarum (strain ATCC

Query: 2 EPGEYAVH 9
EPG AVH
Sbjct: 242 EPGTVAVH 249


>sp|GCSPA_THEVO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 KEPGEYAVHI 10
K PGEY I
Sbjct: 238 KPPGEYGSDI 247


>sp|FAU1_THEKO|PROBABLE ribonuclease FAU-1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 PGEYAVHI 10
PG+YAV I
Sbjct: 154 PGDYAVLI 161


>sp|FAU1_THEGJ|PROBABLE ribonuclease FAU-1|Thermococcus gammatolerans (strain DSM 15229

Query: 3 PGEYAVHI 10
PG+YAV I
Sbjct: 154 PGDYAVLI 161


>sp|FAU1_PYRFU|PROBABLE ribonuclease FAU-1|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PGEYAVHI 10
PG+YAV I
Sbjct: 152 PGDYAVLI 159


>sp|CHED_METVS|PROBABLE chemoreceptor glutamine deamidase CheD|Methanococcus vannielii

Query: 1 KEPGEYA 7
K PG+YA
Sbjct: 55 KSPGKYA 61


>sp|CHED_METMP|PROBABLE chemoreceptor glutamine deamidase CheD|Methanococcus maripaludis

Query: 1 KEPGEYA 7
K PG+YA
Sbjct: 55 KNPGKYA 61


>sp|CHED_METM6|PROBABLE chemoreceptor glutamine deamidase CheD|Methanococcus maripaludis

Query: 1 KEPGEYA 7
K PG+YA
Sbjct: 55 KNPGKYA 61


>sp|T1R1_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 KEPGEYAVHI 10
K P EY HI
Sbjct: 373 KNPEEYKKHI 382


>sp|CYSO_AERPE|PROTEIN CysO|Aeropyrum pernix (strain ATCC 700893

Query: 2 EPGEYAV 8
EPG+Y V
Sbjct: 359 EPGDYVV 365


>sp|AMPPA_METLZ|AMP phosphorylase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 KEPGEY 6
K+PGEY
Sbjct: 455 KKPGEY 460


>sp|SYY_PYRHO|TYROSINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KEPGEYAVH 9
+EP E+ VH
Sbjct: 300 EEPTEFTVH 308


>sp|CAS4_THETK|CRISPR-ASSOCIATED exonuclease Cas4|Thermoproteus tenax (strain ATCC 35583

Query: 2 EPGEYAVHI 10
E EY+VHI
Sbjct: 56 ERAEYSVHI 64


>sp|HPRL2_HALWD|HGPRTASE-LIKE protein 2|Haloquadratum walsbyi (strain DSM 16790

Query: 3 PGEYAVH 9
PGE A+H
Sbjct: 89 PGEVALH 95


>sp|HPRL2_HALWC|HGPRTASE-LIKE protein 2|Haloquadratum walsbyi (strain DSM 16854

Query: 3 PGEYAVH 9
PGE A+H
Sbjct: 89 PGEVALH 95


>sp|TPIS_PYRIL|TRIOSEPHOSPHATE isomerase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 PGEYAVHI 10
PG Y HI
Sbjct: 69 PGAYTAHI 76


>sp|PYRH_STAMF|URIDYLATE kinase|Staphylothermus marinus (strain ATCC 43588

Query: 3 PGEYAV 8
PGEYA+
Sbjct: 177 PGEYAL 182


>sp|REG9_PYRHO|UNCHARACTERIZED HTH-type transcriptional regulator PH1916|Pyrococcus horikoshii

Query: 3 PGEYAVHI 10
PG Y VH+
Sbjct: 94 PGVYEVHL 101


>sp|PFDA_AERPE|PREFOLDIN subunit alpha|Aeropyrum pernix (strain ATCC 700893

Query: 2 EPGEYAVHI 10
EPG+ VH+
Sbjct: 74 EPGKAIVHL 82


>sp|TRUB_AERPE|PROBABLE tRNA pseudouridine synthase B|Aeropyrum pernix (strain ATCC 700893

Query: 3 PGEYAV 8
PGEY+V
Sbjct: 253 PGEYSV 258




124|Sequence|616|625|YAVHIMCDDE

>sp|RFCL_SACS2|REPLICATION factor C large subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 AVHIMCDDE 10
A I+CDDE
Sbjct: 176 AEKIICDDE 184


>sp|RFCL_SACI7|REPLICATION factor C large subunit|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 AVHIMCDDE 10
A I+CDDE
Sbjct: 176 AEKIICDDE 184


>sp|RFCL_SACI6|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 2 AVHIMCDDE 10
A I+CDDE
Sbjct: 176 AEKIICDDE 184


>sp|RFCL_SACI4|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 2 AVHIMCDDE 10
A I+CDDE
Sbjct: 176 AEKIICDDE 184


>sp|RFCL_SACI3|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.16.27)

Query: 2 AVHIMCDDE 10
A I+CDDE
Sbjct: 176 AEKIICDDE 184


>sp|RFCL_SACI2|REPLICATION factor C large subunit|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 AVHIMCDDE 10
A I+CDDE
Sbjct: 176 AEKIICDDE 184


>sp|RFCL_SACI1|REPLICATION factor C large subunit|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 AVHIMCDDE 10
A I+CDDE
Sbjct: 176 AEKIICDDE 184


>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 VHIMCDDE 10
+ I CDDE
Sbjct: 407 IEIYCDDE 414


>sp|GLYA_CALMQ|SERINE hydroxymethyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 3 VHIMCDDE 10
+H+ CD+E
Sbjct: 141 IHLPCDEE 148


>sp|Y952_ARCFU|UNCHARACTERIZED protein AF_0952|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YAVHIMCDD 9
YA+H+M D
Sbjct: 65 YALHVMFQD 73


>sp|RIFK_METBU|RIBOFLAVIN kinase|Methanococcoides burtonii (strain DSM 6242

Query: 4 HIMCDDE 10
HI C DE
Sbjct: 81 HIFCGDE 87


>sp|Y1517_METJA|UNCHARACTERIZED protein MJ1517|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 IMCDDE 10
++CDDE
Sbjct: 197 VVCDDE 202


>sp|Y1847_ARCFU|UNCHARACTERIZED protein AF_1847|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 IMCDDE 10
I+CDDE
Sbjct: 51 IICDDE 56


>sp|GLYA_HALMA|SERINE hydroxymethyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 5 IMCDDE 10
IMCD+E
Sbjct: 238 IMCDEE 243


>sp|Y1292_METJA|UNCHARACTERIZED protein MJ1292|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YAVHIMCDDE 10
Y ++ C+DE
Sbjct: 273 YVYNVRCEDE 282




125|Sequence|621|630|MCDDEDIKDS

>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 2 CDDEDIK 8
C+DED+K
Sbjct: 344 CEDEDLK 350


>sp|Y3539_METJA|UPF0252 protein MJECL39|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DDEDIKDS 10
+DED+KD+
Sbjct: 11 NDEDLKDT 18


>sp|RL15E_STAMF|LARGE ribosomal subunit protein eL15|Staphylothermus marinus (strain ATCC

Query: 1 MCDDEDIK 8
+C+D DIK
Sbjct: 142 ICNDPDIK 149


>sp|DABA_NATPD|PROBABLE inorganic carbon transporter subunit|Natronomonas pharaonis (strain

Query: 1 MCDDEDIKD 9
+C+DE +KD
Sbjct: 512 ICNDEAVKD 520


>sp|GCH3_METMP|GTP cyclohydrolase III|Methanococcus maripaludis (strain DSM 14266

Query: 1 MCDDEDIKDS 10
+C EDIKDS
Sbjct: 198 LCMFEDIKDS 207


>sp|SYM_THEKO|METHIONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 DDEDIK 8
DDED+K
Sbjct: 243 DDEDVK 248


>sp|KAE1B_PICTO|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 CDDEDIKD 9
C DEDI D
Sbjct: 471 CSDEDIAD 478


>sp|SPEH_SULTO|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 CDDEDIKD 9
CD+E +KD
Sbjct: 22 CDNEVLKD 29


>sp|SYM_THEON|METHIONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 3 DDEDIK 8
DDED+K
Sbjct: 243 DDEDVK 248


>sp|SYE_METHJ|GLUTAMATE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 CDDEDIKD 9
CD+E KD
Sbjct: 197 CDNEKFKD 204


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DDEDIKDS 10
+DED+KD+
Sbjct: 984 NDEDLKDA 991


>sp|Y1505_METJA|PUTATIVE ATP-dependent RNA helicase MJ1505|Methanocaldococcus jannaschii

Query: 3 DDEDIK 8
DDED+K
Sbjct: 193 DDEDVK 198


>sp|GCH3_METM7|GTP cyclohydrolase III|Methanococcus maripaludis (strain C7 /

Query: 1 MCDDEDIKDS 10
+C EDI+DS
Sbjct: 198 LCMFEDIRDS 207


>sp|Y558_METJA|UNCHARACTERIZED protein MJ0558|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DEDIKD 9
DED+KD
Sbjct: 99 DEDVKD 104


>sp|ACD2_ARCFU|ACETATE--COA ligase [ADP-forming] II|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MCDDEDIKDS 10
+C D+D+ D+
Sbjct: 473 ICGDDDVFDA 482




126|Sequence|626|635|DIKDSPYMAF

>sp|KUP_METHJ|PROBABLE potassium transport system protein|Methanospirillum hungatei JF-1

Query: 1 DIKDSPY 7
DIKD PY
Sbjct: 515 DIKDEPY 521


>sp|AROA_CALMQ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 1 DIKDSPYMA 9
D+KDSP +A
Sbjct: 291 DLKDSPDLA 299


>sp|ILVC_METTP|KETOL-ACID reductoisomerase (NADP(+))|Methanothrix thermoacetophila (strain

Query: 1 DIKDSP 6
D+KDSP
Sbjct: 47 DLKDSP 52


>sp|RPO1C_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus solfataricus (strain

Query: 1 DIKDSPYM 8
D KD PY+
Sbjct: 3 DEKDKPYL 10




127|Sequence|631|640|PYMAFIHPAT

>sp|HPRT_METVS|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanococcus vannielii (strain ATCC

Query: 1 PYMAFIHPAT 10
PY FIHP +
Sbjct: 19 PYHYFIHPIS 28


>sp|CAS1B_SACS2|CRISPR-ASSOCIATED endonuclease Cas1 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PYMAFIH 7
PY+ FIH
Sbjct: 200 PYLGFIH 206


>sp|COFH_METHJ|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanospirillum hungatei JF-1 (strain

Query: 3 MAFIHPAT 10
++FIHP T
Sbjct: 254 LSFIHPGT 261


>sp|GCSPB_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 1 PYMAFIHP 8
P +AFIHP
Sbjct: 96 PKVAFIHP 103


>sp|HPRT_METKA|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 YMAFIHPAT 10
Y FIHP T
Sbjct: 18 YWYFIHPIT 26


>sp|MFNA_META3|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus aeolicus (strain

Query: 1 PYMAFIHPAT 10
PY+ IH AT
Sbjct: 266 PYLTDIHQAT 275


>sp|HPRT_METTP|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanothrix thermoacetophila (strain

Query: 2 YMAFIHPAT 10
Y FIHP T
Sbjct: 20 YNYFIHPIT 28


>sp|HPRT_METOI|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanothermococcus okinawensis (strain

Query: 2 YMAFIHPAT 10
Y FIHP T
Sbjct: 19 YNYFIHPIT 27


>sp|MCE_PYRHO|METHYLMALONYL-COA epimerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 MAFIHPAT 10
+AFIHP +
Sbjct: 116 IAFIHPKS 123


>sp|HPRT_METMS|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanohalophilus mahii (strain ATCC

Query: 2 YMAFIHPAT 10
Y FIHP T
Sbjct: 20 YPYFIHPIT 28


>sp|HPRT_FERPA|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Ferroglobus placidus (strain DSM 10642

Query: 2 YMAFIHPAT 10
Y FIHP T
Sbjct: 20 YPYFIHPLT 28


>sp|HPRT_ACIB4|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Aciduliprofundum boonei (strain DSM

Query: 2 YMAFIHPAT 10
Y FIHP T
Sbjct: 19 YPYFIHPLT 27


>sp|CAS1A_SACS2|CRISPR-ASSOCIATED endonuclease Cas1 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PYMAFIH 7
PY+ F+H
Sbjct: 268 PYIGFLH 274


>sp|HPRT_METSG|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanothrix soehngenii (strain ATCC

Query: 2 YMAFIHPAT 10
Y FIHP T
Sbjct: 20 YDYFIHPIT 28


>sp|CAS1B_PYRAE|CRISPR-ASSOCIATED endonuclease Cas1 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PYMAFIH 7
PY+ F+H
Sbjct: 209 PYVGFLH 215


>sp|FBPAP_CENSY|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Cenarchaeum symbiosum (strain A)

Query: 4 AFIHPAT 10
F+HPAT
Sbjct: 328 GFVHPAT 334


>sp|UPPP_METM5|UNDECAPRENYL-DIPHOSPHATASE maripaludis (strain C5 /

Query: 2 YMAFIHPAT 10
Y AF+H AT
Sbjct: 39 YFAFLHLAT 47


>sp|HPRT_METLA|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanobacterium lacus (strain AL-21)

Query: 2 YMAFIHPAT 10
Y F+HP T
Sbjct: 20 YNYFVHPIT 28


>sp|HPRT_METIM|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanocaldococcus infernus (strain DSM

Query: 2 YMAFIHPAT 10
Y F+HP T
Sbjct: 18 YNYFVHPIT 26


>sp|GCSPB_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 1 PYMAFIHP 8
P +A+IHP
Sbjct: 96 PKVAYIHP 103


>sp|UPPP_METMP|UNDECAPRENYL-DIPHOSPHATASE maripaludis (strain DSM 14266

Query: 2 YMAFIHPAT 10
Y AF+H AT
Sbjct: 39 YFAFLHLAT 47


>sp|UPPP_METM6|UNDECAPRENYL-DIPHOSPHATASE maripaludis (strain C6 /

Query: 2 YMAFIHPAT 10
Y AF+H AT
Sbjct: 39 YFAFLHLAT 47


>sp|GCSPB_PYRFU|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus furiosus

Query: 1 PYMAFIHP 8
P +A+IHP
Sbjct: 96 PKVAYIHP 103


>sp|UPPP_METM7|UNDECAPRENYL-DIPHOSPHATASE maripaludis (strain C7 /

Query: 2 YMAFIHPAT 10
Y AF+H AT
Sbjct: 39 YFAFLHLAT 47


>sp|HPRT_METHJ|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 2 YMAFIHPAT 10
Y F+HP T
Sbjct: 20 YNYFVHPIT 28


>sp|HPRT_METPW|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanobacterium paludis (strain DSM

Query: 2 YMAFIHPAT 10
Y F+HP T
Sbjct: 20 YDYFVHPIT 28


>sp|PURO_METTH|IMP cyclohydrolase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 YMAFIHPAT 10
+ AF HP T
Sbjct: 176 FAAFTHPVT 184


>sp|GCSPB_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 PYMAFIHP 8
P +A+IHP
Sbjct: 96 PGVAYIHP 103


>sp|Y646_METJA|UPF0305 protein MJ0646|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PYMAFI 6
PY+AFI
Sbjct: 107 PYLAFI 112


>sp|UPPP_METVS|UNDECAPRENYL-DIPHOSPHATASE vannielii (strain ATCC 35089

Query: 2 YMAFIHPAT 10
Y AF+H AT
Sbjct: 39 YFAFLHLAT 47




128|Sequence|636|645|IHPATGGYNP

>sp|CMR1_SACS2|CRISPR system CMR subunit Cmr1|Saccharolobus solfataricus (strain ATCC

Query: 1 IHPATGGYN 9
I+P TGGYN
Sbjct: 13 IYPLTGGYN 21


>sp|UDGA_SULTO|TYPE-4 uracil-DNA glycosylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 HPATGGYNP 10
HPA YNP
Sbjct: 164 HPAAALYNP 172


>sp|UDGA_SACS2|TYPE-4 uracil-DNA glycosylase|Saccharolobus solfataricus (strain ATCC

Query: 2 HPATGGYNP 10
HPA YNP
Sbjct: 164 HPAAALYNP 172


>sp|AMPPA_PYRHO|AMP phosphorylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IHPATGGY 8
IH TGGY
Sbjct: 417 IHAQTGGY 424


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 IHPATGGYNP 10
+ P TG Y+P
Sbjct: 1 MKPLTGNYDP 10


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 IHPATGGYNP 10
+ P TG Y+P
Sbjct: 1 MKPLTGNYDP 10


>sp|RPO11_METVS|DNA-DIRECTED RNA polymerase subunit Rpo11|Methanococcus vannielii (strain ATCC

Query: 1 IHPATGGY--NP 10
+HP TG Y NP
Sbjct: 51 LHPETGRYISNP 62


>sp|RPO11_METJA|DNA-DIRECTED RNA polymerase subunit Rpo11|Methanocaldococcus jannaschii

Query: 1 IHPATGGY--NP 10
+HP TG Y NP
Sbjct: 50 LHPETGRYISNP 61


>sp|RL30_SULTO|LARGE ribosomal subunit protein uL30|Sulfurisphaera tokodaii (strain DSM

Query: 1 IHPATGGY 8
+HP +GG+
Sbjct: 122 LHPPSGGF 129


>sp|RL30_METKA|LARGE ribosomal subunit protein uL30|Methanopyrus kandleri (strain AV19 /

Query: 1 IHPATGGY 8
+HP GGY
Sbjct: 112 LHPPRGGY 119


>sp|CARB_METTH|CARBAMOYL phosphate synthase large chain|Methanothermobacter

Query: 1 IHPATGGY 8
+HP TG Y
Sbjct: 286 VHPETGEY 293


>sp|TF2B_IGNH4|TRANSCRIPTION initiation factor IIB|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 HPATGGYNP 10
HP T G +P
Sbjct: 247 HPITAGKDP 255


>sp|TFRA_METTM|FUMARATE reductase (CoM/CoB) subunit A|Methanothermobacter marburgensis

Query: 3 PATGGYN 9
P TGG+N
Sbjct: 479 PETGGFN 485


>sp|MCRG_METTH|METHYL-COENZYME M reductase I subunit|Methanothermobacter thermautotrophicus

Query: 4 ATGGYNP 10
+ GGYNP
Sbjct: 242 SQGGYNP 248


>sp|GLYA_THEKO|SERINE hydroxymethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 IHPATGGY 8
+HPA GG+
Sbjct: 328 LHPAAGGW 335


>sp|GLYA_THEGJ|SERINE hydroxymethyltransferase|Thermococcus gammatolerans (strain DSM

Query: 1 IHPATGGY 8
+HPA GG+
Sbjct: 326 LHPAAGGW 333


>sp|CAPPA_METMA|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IHPATGGYN 9
+H TGGY+
Sbjct: 344 MHKGTGGYS 352


>sp|CAPPA_METBF|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 IHPATGGYN 9
+H TGGY+
Sbjct: 344 MHKGTGGYS 352


>sp|Y3543_METJA|UNCHARACTERIZED protein MJECL43|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IHPATGG 7
IHP +GG
Sbjct: 225 IHPLSGG 231


>sp|RL2_THEPD|LARGE ribosomal subunit protein uL2|Thermofilum pendens (strain DSM 2475

Query: 2 HPATGGYNP 10
HPA GG++P
Sbjct: 204 HPAGGGHHP 212


>sp|THIDN_METJA|BIFUNCTIONAL thiamine biosynthesis protein ThiDN|Methanocaldococcus jannaschii

Query: 4 ATGGYNP 10
A GGY+P
Sbjct: 5 AIGGYDP 11


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 TGGYNP 10
TG YNP
Sbjct: 5 TGSYNP 10


>sp|DHYS_METTE|PROBABLE deoxyhypusine synthase|Methanosarcina thermophila

Query: 2 HPATGG 7
HP TGG
Sbjct: 266 HPETGG 271


>sp|DPM1L_HALVD|DOLICHYL-PHOSPHATE hexose transferase HVO_1613|Haloferax volcanii (strain ATCC 29605

Query: 1 IHPATGGYN 9
I PA GYN
Sbjct: 179 IRPAMRGYN 187


>sp|RL30_SULAC|LARGE ribosomal subunit protein uL30|Sulfolobus acidocaldarius (strain

Query: 1 IHPATGGY 8
+HP GG+
Sbjct: 120 LHPPKGGF 127


>sp|MFNA_METLZ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanocorpusculum labreanum

Query: 2 HPATGGY 8
HP GGY
Sbjct: 78 HPGAGGY 84


>sp|HMDH_ARCFU|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 HPATGGYNP 10
+ A GGY P
Sbjct: 304 YAAIGGYKP 312


>sp|NCPP_AERPE|PROBABLE inosine/xanthosine triphosphatase|Aeropyrum pernix (strain ATCC

Query: 3 PATGGY 8
PA+GGY
Sbjct: 80 PASGGY 85


>sp|RL30_PYRAE|LARGE ribosomal subunit protein uL30|Pyrobaculum aerophilum (strain ATCC

Query: 1 IHPATGGYN 9
+HP GG N
Sbjct: 143 LHPPRGGLN 151


>sp|GLYA_PYRFU|SERINE hydroxymethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IHPATGGY 8
+HPA GG+
Sbjct: 326 LHPAGGGW 333


>sp|GLYA_PYRHO|SERINE hydroxymethyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IHPATGGY 8
+HPA GG+
Sbjct: 326 LHPAGGGW 333


>sp|GLYA_PYRAB|SERINE hydroxymethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 IHPATGGY 8
+HPA GG+
Sbjct: 326 LHPAGGGW 333


>sp|RL30_SACI6|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 1 IHPATGGY 8
+HP GG+
Sbjct: 122 LHPPKGGF 129


>sp|RL30_SACI4|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 1 IHPATGGY 8
+HP GG+
Sbjct: 122 LHPPKGGF 129


>sp|RL30_SACI3|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 1 IHPATGGY 8
+HP GG+
Sbjct: 122 LHPPKGGF 129


>sp|RL30_SACI2|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 1 IHPATGGY 8
+HP GG+
Sbjct: 122 LHPPKGGF 129


>sp|RL30_SACI1|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 1 IHPATGGY 8
+HP GG+
Sbjct: 122 LHPPKGGF 129


>sp|RL30_PYRNV|LARGE ribosomal subunit protein uL30|Pyrobaculum neutrophilum (strain DSM

Query: 1 IHPATGGYN 9
+HP GG N
Sbjct: 140 LHPPRGGLN 148


>sp|PPSA_AERPE|PHOSPHOENOLPYRUVATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 IHPATG 6
IHP TG
Sbjct: 202 IHPVTG 207


>sp|RL30_PYRCJ|LARGE ribosomal subunit protein uL30|Pyrobaculum calidifontis (strain DSM

Query: 1 IHPATGGYN 9
+HP GG N
Sbjct: 144 LHPPRGGLN 152


>sp|RL30_KORCO|LARGE ribosomal subunit protein uL30|Korarchaeum cryptofilum (strain

Query: 1 IHPATGGY 8
+HP GG+
Sbjct: 126 LHPPKGGF 133


>sp|RL30_DESA1|LARGE ribosomal subunit protein uL30|Desulfurococcus amylolyticus (strain

Query: 1 IHPATGGYN 9
+HP GG++
Sbjct: 126 LHPPRGGFD 134


>sp|RL30_SACI7|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 1 IHPATGGY 8
+HP GG+
Sbjct: 122 LHPPKGGF 129


>sp|RL30_PYRHO|LARGE ribosomal subunit protein uL30|Pyrococcus horikoshii (strain ATCC

Query: 1 IHPATGGY 8
+HP GG+
Sbjct: 119 LHPPRGGF 126


>sp|RL30_PYRFU|LARGE ribosomal subunit protein uL30|Pyrococcus furiosus (strain ATCC

Query: 1 IHPATGGY 8
+HP GG+
Sbjct: 119 LHPPRGGF 126


>sp|RL30_PYRAB|LARGE ribosomal subunit protein uL30|Pyrococcus abyssi (strain GE5 /

Query: 1 IHPATGGY 8
+HP GG+
Sbjct: 119 LHPPRGGF 126


>sp|KAE1B_THEVO|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 PATGGYNP 10
P TGG +P
Sbjct: 33 PKTGGIHP 40


>sp|RL30_PYRIL|LARGE ribosomal subunit protein uL30|Pyrobaculum islandicum (strain DSM

Query: 1 IHPATGGYN 9
+HP GG N
Sbjct: 142 LHPPRGGLN 150


>sp|RL30_SACS2|LARGE ribosomal subunit protein uL30|Saccharolobus solfataricus (strain

Query: 1 IHPATGGY 8
+HP GG+
Sbjct: 122 LHPPRGGF 129


>sp|RL30_HYPBU|LARGE ribosomal subunit protein uL30|Hyperthermus butylicus (strain DSM

Query: 1 IHPATGGY 8
+HP GG+
Sbjct: 145 LHPPRGGF 152


>sp|PPSA_METTH|PROBABLE phosphoenolpyruvate synthase|Methanothermobacter thermautotrophicus

Query: 1 IHPATG 6
+HP+TG
Sbjct: 228 VHPSTG 233


>sp|SLAA_ACIAM|S-LAYER protein A|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 IHPATGG 7
I+PATGG
Sbjct: 40 INPATGG 46


>sp|RL30_CALMQ|LARGE ribosomal subunit protein uL30|Caldivirga maquilingensis (strain

Query: 1 IHPATGGY 8
+HP GG+
Sbjct: 149 LHPPKGGF 156


>sp|RL30_AERPE|LARGE ribosomal subunit protein uL30|Aeropyrum pernix (strain ATCC 700893

Query: 1 IHPATGGY 8
+HP GG+
Sbjct: 123 LHPPRGGF 130


>sp|RL30_IGNH4|LARGE ribosomal subunit protein uL30|Ignicoccus hospitalis (strain KIN4/I

Query: 1 IHPATGGY 8
+HP GG+
Sbjct: 123 LHPPRGGF 130


>sp|PURQ_METTP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanothrix thermoacetophila (strain DSM

Query: 2 HPATGGYNP 10
HP GY P
Sbjct: 237 HPRIPGYGP 245


>sp|RL30_PYRAR|LARGE ribosomal subunit protein uL30|Pyrobaculum arsenaticum (strain DSM

Query: 1 IHPATGGYN 9
+HP GG N
Sbjct: 141 LHPPRGGLN 149


>sp|KAE1_HYPBU|TRNA N6-adenosine threonylcarbamoyltransferase|Hyperthermus butylicus

Query: 2 HPATGGYNP 10
HP GG +P
Sbjct: 63 HPPKGGIHP 71


>sp|RL30_NATPD|LARGE ribosomal subunit protein uL30|Natronomonas pharaonis (strain ATCC

Query: 1 IHPATGGYN 9
+HP GG++
Sbjct: 118 LHPPRGGHD 126


>sp|FOR_THELN|TUNGSTEN-CONTAINING formaldehyde ferredoxin oxidoreductase|Thermococcus litoralis

Query: 3 PATGGY 8
P TGGY
Sbjct: 83 PLTGGY 88


>sp|KAE1B_METLZ|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 PATGGYNP 10
P TGG +P
Sbjct: 35 PPTGGIHP 42




129|Sequence|641|650|GGYNPDLVRA

>sp|RL4_THEGJ|LARGE ribosomal subunit protein uL4|Thermococcus gammatolerans (strain

Query: 4 NPDLVRA 10
NPDLVRA
Sbjct: 123 NPDLVRA 129


>sp|SPEE_ARCFU|POLYAMINE aminopropyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 YNPDLVRA 10
YNPD+ RA
Sbjct: 246 YNPDVHRA 253


>sp|SYM_METAR|METHIONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 GYNPDLVR 9
G++PDL+R
Sbjct: 354 GFHPDLLR 361


>sp|SYM_METMA|METHIONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GYNPDLVR 9
G++PDL+R
Sbjct: 353 GFHPDLLR 360


>sp|Y1255_METJA|UNCHARACTERIZED glycosyltransferase MJ1255|Methanocaldococcus jannaschii (strain

Query: 3 YNPDLV 8
YNPDL+
Sbjct: 93 YNPDLI 98


>sp|MFNA_METMA|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosarcina mazei (strain

Query: 4 NPDLVR 9
NPDLVR
Sbjct: 343 NPDLVR 348


>sp|SYM_METAC|METHIONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GYNPDLVR 9
G++PDL+R
Sbjct: 353 GFHPDLLR 360


>sp|GGR_PYRAB|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus abyssi (strain GE5 /

Query: 2 GYNPDLV 8
GY+PDL+
Sbjct: 185 GYDPDLI 191


>sp|SYM_METBF|METHIONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GYNPDLVR 9
G++PDL+R
Sbjct: 349 GFHPDLLR 356


>sp|Y351_METJA|UNCHARACTERIZED protein MJ0351|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YNPDLVRA 10
Y+PDLV A
Sbjct: 87 YSPDLVNA 94


>sp|SYM_HALWD|METHIONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 GYNPDLVR 9
G++PDL+R
Sbjct: 396 GFHPDLLR 403


>sp|SYM_HALSA|METHIONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GGYNPDLVR 9
G++PDL+R
Sbjct: 355 AGFHPDLLR 363


>sp|GGR_PYRFU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GYNPDLV 8
GY+PDL+
Sbjct: 185 GYDPDLI 191


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 YNPDLVR 9
Y+PD+VR
Sbjct: 639 YSPDVVR 645


>sp|EF1A_METJA|ELONGATION factor 1-alpha|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GYNPDLV 8
GYNPD +
Sbjct: 177 GYNPDQI 183


>sp|AATA_SULAC|A-TYPE ATP synthase subunit A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GGYNPDLVR 9
G + PD+VR
Sbjct: 552 GSFEPDIVR 560


>sp|ARCSA_THEAC|ARCHAEOSINE synthase subunit alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 YNPDLVR 9
Y PDL+R
Sbjct: 219 YRPDLIR 225


>sp|HIS4_METAR|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanocella arvoryzae (strain

Query: 4 NPDLVR 9
NPDLVR
Sbjct: 111 NPDLVR 116


>sp|TRPF_METKA|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanopyrus kandleri (strain AV19 /

Query: 1 GGYNPDLVR 9
GG NP+ VR
Sbjct: 169 GGLNPENVR 177


>sp|LEUC_SULTO|3-ISOPROPYLMALATE dehydratase large subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GYNPDLVR 9
GY P++VR
Sbjct: 240 GYEPNIVR 247


>sp|MCRG_METTH|METHYL-COENZYME M reductase I subunit|Methanothermobacter thermautotrophicus

Query: 1 GGYNPD 6
GGYNP+
Sbjct: 244 GGYNPE 249


>sp|RL4_METB6|LARGE ribosomal subunit protein uL4|Methanoregula boonei (strain DSM

Query: 3 YNPDLVR 9
Y PDL+R
Sbjct: 26 YRPDLIR 32


>sp|MFNA_METBF|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosarcina barkeri (strain

Query: 4 NPDLVR 9
NPD+VR
Sbjct: 343 NPDIVR 348


>sp|TSGDD_HALVD|GLUCOSE import ATP-binding protein TsgD13|Haloferax volcanii (strain ATCC

Query: 1 GGYNPDLVRA 10
GG+ PD VR+
Sbjct: 120 GGWLPDAVRS 129


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 3 YNPDLVR 9
YNPD+++
Sbjct: 614 YNPDIIK 620


>sp|LADH_METJA|LACTALDEHYDE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GGYNPDLV 8
GG NP++V
Sbjct: 242 GGVNPNIV 249


>sp|TRPD_HALMA|ANTHRANILATE phosphoribosyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GGYNPDLV 8
G Y+PDLV
Sbjct: 191 GVYDPDLV 198


>sp|GLME_HALMA|GLUTAMATE mutase epsilon subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 GGYNPDLVRA 10
GG+ PD RA
Sbjct: 287 GGFPPDEARA 296


>sp|SYL_METKA|LEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 YNPDLVR 9
Y PD+VR
Sbjct: 641 YGPDVVR 647


>sp|TRPD_HALLT|ANTHRANILATE phosphoribosyltransferase|Halorubrum lacusprofundi (strain ATCC

Query: 1 GGYNPDLV 8
G Y+PDLV
Sbjct: 193 GVYDPDLV 200


>sp|HIS6_META3|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus aeolicus (strain

Query: 3 YNPDLVR 9
+NPDL++
Sbjct: 108 HNPDLIK 114


>sp|CARA_METMP|CARBAMOYL phosphate synthase small chain|Methanococcus maripaludis (strain

Query: 3 YNPDLV 8
YNPD V
Sbjct: 210 YNPDFV 215


>sp|URE1_SULTO|UREASE subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GGYNPDLVR 9
GG+ PD+++
Sbjct: 278 GGHAPDIIK 286


>sp|CARA_METM7|CARBAMOYL phosphate synthase small chain|Methanococcus maripaludis (strain C7

Query: 3 YNPDLV 8
YNPD V
Sbjct: 210 YNPDFV 215


>sp|CARA_METM5|CARBAMOYL phosphate synthase small chain|Methanococcus maripaludis (strain C5

Query: 3 YNPDLV 8
YNPD V
Sbjct: 210 YNPDFV 215


>sp|GYRA_HALWD|DNA gyrase subunit A|Haloquadratum walsbyi (strain DSM 16790

Query: 2 GYNPDLVR 9
G NPD+V+
Sbjct: 315 GANPDIVK 322


>sp|RL15_AERPE|LARGE ribosomal subunit protein uL15|Aeropyrum pernix (strain ATCC

Query: 2 GYNPDLVRA 10
G+NP +RA
Sbjct: 61 GFNPPRIRA 69


>sp|CARA_METVS|CARBAMOYL phosphate synthase small chain|Methanococcus vannielii (strain ATCC

Query: 3 YNPDLV 8
YNPD V
Sbjct: 210 YNPDFV 215


>sp|Y3270_HALS3|UNCHARACTERIZED solute-binding protein OE_3270R|Halobacterium salinarum (strain

Query: 4 NPDLVR 9
NPD+VR
Sbjct: 281 NPDMVR 286


>sp|Y1595_HALSA|UNCHARACTERIZED solute-binding protein VNG_1595C|Halobacterium salinarum (strain

Query: 4 NPDLVR 9
NPD+VR
Sbjct: 281 NPDMVR 286


>sp|SYA_KORCO|ALANINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 GYNPDLVR 9
G +PD+VR
Sbjct: 440 GLSPDIVR 447


>sp|GGR_THEKO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GYNPDLV 8
G++PDL+
Sbjct: 187 GFDPDLI 193


>sp|MTD_METST|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosphaera

Query: 3 YNPDLV 8
YNPD++
Sbjct: 58 YNPDVI 63


>sp|TRPD_HALWD|ANTHRANILATE phosphoribosyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GGYNPDLV 8
G Y+PDLV
Sbjct: 193 GVYDPDLV 200


>sp|PSB1_KORCO|PROTEASOME subunit beta 1|Korarchaeum cryptofilum (strain OPF8)

Query: 1 GGYNPDLVR 9
GY+PD+ R
Sbjct: 146 SGYSPDMDR 154


>sp|AROE_SACI7|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 GGYNPD 6
GGYN D
Sbjct: 99 GGYNTD 104


>sp|AROE_SACI1|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 GGYNPD 6
GGYN D
Sbjct: 99 GGYNTD 104


>sp|GGR_PYRHO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GYNPDLV 8
G++PDL+
Sbjct: 185 GFDPDLI 191


>sp|GGR_THEGJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 GYNPDLV 8
G++PDL+
Sbjct: 187 GFDPDLI 193


>sp|PSB1_METS5|PROTEASOME subunit beta 1|Metallosphaera sedula (strain ATCC 51363

Query: 2 GYNPDL 7
GY+PDL
Sbjct: 162 GYSPDL 167


>sp|FEN_AERPE|FLAP endonuclease 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 GGYNPDLVR 9
G Y+PD +R
Sbjct: 273 GEYDPDYLR 281


>sp|GSA_THEAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GGYNPDLVRA 10
G +PD+VRA
Sbjct: 61 GHADPDVVRA 70


>sp|DCDB_METHJ|DCTP deaminase, dUMP-forming|Methanospirillum hungatei JF-1 (strain

Query: 3 YNPDLVR 9
YNP+L++
Sbjct: 22 YNPELIQ 28


>sp|LEUC_SACS2|3-ISOPROPYLMALATE dehydratase large subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 GYNPDLV 8
GY P+LV
Sbjct: 242 GYEPELV 248


>sp|TBPB_HALSA|TATA-BOX-BINDING protein B|Halobacterium salinarum (strain ATCC 700922

Query: 1 GGYNPD 6
GG NPD
Sbjct: 161 GGQNPD 166




130|Sequence|646|655|DLVRAYGPGL

>sp|GATE_THEVO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermoplasma volcanium (strain ATCC

Query: 1 DLVRAYG 7
DLVRAYG
Sbjct: 323 DLVRAYG 329


>sp|SYK_CENSM|LYSINE--TRNA ligase|Cenarchaeum symbiosum

Query: 1 DLVRAYGPGL 10
D VRAYG GL
Sbjct: 50 DAVRAYGVGL 59


>sp|SYK_CENSY|LYSINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 DLVRAYGPGL 10
D VRAYG GL
Sbjct: 51 DAVRAYGVGL 60


>sp|GATE_THEAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermoplasma acidophilum (strain ATCC

Query: 1 DLVRAYG 7
DLVR+YG
Sbjct: 320 DLVRSYG 326


>sp|DPHB_METPE|DIPHTHINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 DLVRAYG 7
DLVRAYG
Sbjct: 45 DLVRAYG 51


>sp|RTCB_ARCFU|TRNA-SPLICING ligase RtcB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VRAYGPGL 10
RA+GPGL
Sbjct: 355 TRAFGPGL 362


>sp|GSA_AERPE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DLVRAYGP 8
DLV AYGP
Sbjct: 55 DLVLAYGP 62


>sp|RTCB_METMP|TRNA-SPLICING ligase RtcB|Methanococcus maripaludis (strain DSM 14266

Query: 4 RAYGPG 9
RA+GPG
Sbjct: 354 RAFGPG 359


>sp|CDC69_HALSA|ORC1-TYPE DNA replication protein 9|Halobacterium salinarum (strain ATCC

Query: 1 DLVRAYGP 8
D+VR +GP
Sbjct: 288 DVVREHGP 295


>sp|SUDHB_PYRFU|SULFIDE dehydrogenase subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DLVRAYGPGL 10
DLV A GP +
Sbjct: 182 DLVHAVGPAI 191


>sp|RTCB_METTH|TRNA-SPLICING ligase RtcB|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 RAYGPG 9
RA+GPG
Sbjct: 356 RAFGPG 361


>sp|RSMA_PYRAB|PROBABLE ribosomal RNA small subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 DLVRAYGPGL 10
D+V GPGL
Sbjct: 44 DVVLEVGPGL 53


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 1 DLVRAYGPGL 10
D YGPG+
Sbjct: 775 DATMVYGPGI 784


>sp|ARSD_HALSA|PUTATIVE arsenical resistance operon repressor|Halobacterium salinarum

Query: 1 DLVRAYGPGL 10
DLV +GP +
Sbjct: 64 DLVEEHGPSI 73


>sp|Y3143_PYRAE|UPF0273 protein PAE3143|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 VRAYGPGL 10
VR+Y PGL
Sbjct: 6 VRSYVPGL 13


>sp|Y1775_ARCFU|PUTATIVE aminohydrolase AF_1775|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DLVRAYGPG 9
DLV GPG
Sbjct: 69 DLVSIVGPG 77


>sp|RSMA_THEON|PROBABLE ribosomal RNA small subunit|Thermococcus onnurineus (strain NA1)

Query: 1 DLVRAYGPGL 10
D+V GPGL
Sbjct: 44 DVVLEIGPGL 53


>sp|TMCA_HALVD|TRNA(MET) cytidine acetyltransferase TmcA|Haloferax volcanii (strain ATCC

Query: 5 AYGPGL 10
+YGPGL
Sbjct: 664 SYGPGL 669


>sp|GSA_METBF|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DLVRAYGPGL 10
D AYGP L
Sbjct: 57 DYCLAYGPAL 66


>sp|DNLI_METPE|DNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 DLVRAYGPGL 10
DL+ Y PG+
Sbjct: 398 DLLSLYSPGV 407


>sp|RL2_HYPBU|LARGE ribosomal subunit protein uL2|Hyperthermus butylicus (strain DSM

Query: 1 DLVRAYG 7
LVRAYG
Sbjct: 117 KLVRAYG 123




131|Sequence|651|660|YGPGLEKSGC

>sp|GUAAA_METTH|GMP synthase [glutamine-hydrolyzing] subunit A|Methanothermobacter

Query: 2 GPGLEKSG 9
GP LE+SG
Sbjct: 53 GPSLERSG 60


>sp|PRNK_PYRHO|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase PH0197|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YGPGLE 6
YGPG+E
Sbjct: 147 YGPGVE 152


>sp|COBD_METM5|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus maripaludis

Query: 4 GLEKSGC 10
GLEK GC
Sbjct: 264 GLEKIGC 270


>sp|DNAG_IGNH4|DNA primase DnaG|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 GPGLEKS 8
GPG+E+S
Sbjct: 158 GPGVERS 164


>sp|HEM1_NATPD|GLUTAMYL-TRNA reductase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 YGPGLE 6
+GPGLE
Sbjct: 411 FGPGLE 416


>sp|RUVB_METB6|HOLLIDAY junction branch migration complex|Methanoregula boonei (strain

Query: 2 GPGLEKSG 9
GP LEK+G
Sbjct: 85 GPVLEKTG 92


>sp|DNAG_AERPE|DNA primase DnaG|Aeropyrum pernix (strain ATCC 700893

Query: 2 GPGLEKS 8
GPG+EK+
Sbjct: 161 GPGVEKA 167


>sp|LYSZ_NITMS|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Nitrosopumilus

Query: 2 GPGLEK 7
GPG+EK
Sbjct: 220 GPGMEK 225


>sp|GLMM_METST|PROBABLE phosphoglucosamine mutase|Methanosphaera stadtmanae (strain ATCC

Query: 4 GLEKSGC 10
GL++SGC
Sbjct: 64 GLQQSGC 70


>sp|Y1147_METJA|UNCHARACTERIZED protein MJ1147|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YGPGLEKSG 9
YG +EK+G
Sbjct: 371 YGESMEKTG 379


>sp|Y973_METJA|UNCHARACTERIZED protein MJ0973|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YGPGLEKSGC 10
Y G E+ GC
Sbjct: 336 YDKGFERIGC 345


>sp|LYSZ_CENSY|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Cenarchaeum symbiosum

Query: 2 GPGLEK 7
GPG+EK
Sbjct: 219 GPGMEK 224


>sp|PELO_THEVO|PROTEIN pelota homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GPGLEKSG 9
GPG K+G
Sbjct: 196 GPGFAKNG 203


>sp|PELO_METST|PROTEIN pelota homolog|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 GPGLEKSG 9
GPG K+G
Sbjct: 204 GPGFTKNG 211


>sp|Y1214_METKA|UPF0210 protein MK1214|Methanopyrus kandleri (strain AV19 /

Query: 2 GPGLEKSGC 10
G GLE GC
Sbjct: 295 GIGLESCGC 303


>sp|SYR_METHJ|ARGININE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 YGPGLEKS 8
YG G EKS
Sbjct: 100 YGKGQEKS 107


>sp|PYRH_PYRFU|URIDYLATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GPGLEKSG 9
G G+EK+G
Sbjct: 172 GKGIEKAG 179


>sp|NIFD_METTL|NITROGENASE molybdenum-iron protein alpha chain|Methanothermococcus

Query: 3 PGLEKSGC 10
P LEK GC
Sbjct: 225 PLLEKIGC 232


>sp|AROA_METAR|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 5 LEKSGC 10
LEK+GC
Sbjct: 202 LEKAGC 207




132|Sequence|656|665|EKSGCIVNNL

>sp|LYSZ_PYRNV|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrobaculum

Query: 4 GCIVNNL 10
GC+VN+L
Sbjct: 36 GCLVNDL 42


>sp|CBPX1_SACS2|THERMOSTABLE carboxypeptidase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EKSGCIVNN 9
EK GCI N
Sbjct: 356 EKKGCIYPN 364


>sp|CBPX2_SACS2|THERMOSTABLE carboxypeptidase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EKSGCIVNN 9
EK GCI N
Sbjct: 356 EKKGCIYPN 364


>sp|LYSZ_PYRAE|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrobaculum

Query: 4 GCIVNNL 10
GC+VN L
Sbjct: 36 GCLVNEL 42


>sp|LYSZ_PYRCJ|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrobaculum

Query: 4 GCIVNNL 10
GC+VN L
Sbjct: 36 GCLVNEL 42


>sp|GLYA_PICTO|SERINE hydroxymethyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 EKSGCIVN 8
EKSG I+N
Sbjct: 340 EKSGIILN 347


>sp|HDRB_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit

Query: 4 GCIVNN 9
GCI+NN
Sbjct: 8 GCIMNN 13


>sp|HDRB_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit

Query: 4 GCIVNN 9
GCI+NN
Sbjct: 8 GCIMNN 13




133|Sequence|661|670|IVNNLAEFTV

>sp|DAPAL_THEAC|UNCHARACTERIZED DapA-like lyase Ta1157|Thermoplasma acidophilum (strain ATCC

Query: 1 IVNNLAEFTV 10
+++NLA+F V
Sbjct: 27 LIDNLADFGV 36


>sp|TRUD_THEVO|PROBABLE tRNA pseudouridine synthase D|Thermoplasma volcanium (strain ATCC

Query: 3 NNLAEFTV 10
NN+ EFT+
Sbjct: 374 NNVVEFTL 381




134|Sequence|666|675|AEFTVDPKDA

>sp|PANE_THEKO|2-DEHYDROPANTOATE 2-reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 EFTVDPK 8
EFTV PK
Sbjct: 50 EFTVKPK 56


>sp|OFOA_SACSO|2-OXOACID:FERREDOXIN oxidoreductase subunit alpha|Saccharolobus solfataricus (Sulfolobus

Query: 3 FTVDPK 8
FTVDPK
Sbjct: 273 FTVDPK 278


>sp|CCA_AERPE|CCA-ADDING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 1 AEFTVDPKDA 10
A VDP+DA
Sbjct: 131 APLAVDPRDA 140


>sp|TRPD_HALMA|ANTHRANILATE phosphoribosyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 AEFTVDPKD 9
AE+T+ P+D
Sbjct: 241 AEYTITPED 249


>sp|ASSY_METMP|ARGININOSUCCINATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 FTVDPKDA 10
+TVDP DA
Sbjct: 204 WTVDPTDA 211


>sp|Y2125_METS5|UPF0173 metal-dependent hydrolase Msed_2125|Metallosphaera sedula (strain

Query: 1 AEFTVDPKDA 10
FT+DP+ A
Sbjct: 164 GRFTMDPRQA 173


>sp|APEH_AERPE|ACYLAMINO-ACID-RELEASING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 4 TVDPKDA 10
TVDP+D
Sbjct: 222 TVDPRDG 228


>sp|TRPD_HALLT|ANTHRANILATE phosphoribosyltransferase|Halorubrum lacusprofundi (strain ATCC

Query: 2 EFTVDPKD 9
EFT+ P+D
Sbjct: 244 EFTIAPED 251


>sp|LONH_THEVO|PUTATIVE lon protease homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 5 VDPKDA 10
+DPKDA
Sbjct: 113 IDPKDA 118


>sp|LONH_THEAC|PUTATIVE lon protease homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 VDPKDA 10
+DPKDA
Sbjct: 113 IDPKDA 118




135|Sequence|671|680|DPKDAGKAPL

>sp|APGM_PYRHO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DPKDAGKAPL 10
DP +AGK PL
Sbjct: 167 DPHEAGKPPL 176


>sp|Y119_PYRCJ|UPF0215 protein Pcal_0119|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 DPKDAGKA 8
DP DAG+A
Sbjct: 142 DPADAGRA 149


>sp|Y521_METJA|UNCHARACTERIZED protein MJ0521|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KDAGKAPL 10
KDAGK P
Sbjct: 59 KDAGKLPF 66


>sp|G3P_SULAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DPKDAGKAPL 10
DPK+ K P+
Sbjct: 172 DPKEVKKGPI 181


>sp|G3P_THEAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DPKDAGKAPL 10
DP D+ K P+
Sbjct: 170 DPNDSKKGPI 179


>sp|G3P_METS5|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Metallosphaera sedula (strain ATCC 51363

Query: 1 DPKDAGKAPL 10
DPK+ K P+
Sbjct: 170 DPKEVKKGPI 179


>sp|GADH_THEAC|D-GLYCERALDEHYDE dehydrogenase (NADP(+))|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DPKDAGKAPL 10
DPK+A PL
Sbjct: 312 DPKNADMGPL 321


>sp|Y952_PYRAE|UPF0215 protein PAE0952|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DPKDAGKA 8
DP DAG+A
Sbjct: 142 DPVDAGRA 149


>sp|APGM_THEGJ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermococcus gammatolerans (strain DSM

Query: 1 DPKDAGKAP 9
DP +AGK P
Sbjct: 166 DPHEAGKPP 174


>sp|Y209_ARCFU|UNCHARACTERIZED protein AF_0209|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PKDAGKAP 9
PK GKAP
Sbjct: 115 PKKTGKAP 122


>sp|APGM_THEKO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermococcus kodakarensis (strain ATCC

Query: 1 DPKDAGKAP 9
DP +AGK P
Sbjct: 166 DPHEAGKPP 174


>sp|G3P_AERPE|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DPKDAGKAPL 10
DPK+ K P+
Sbjct: 173 DPKEVKKGPI 182


>sp|APGM_PYRFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DPKDAGKAP 9
DP +AGK P
Sbjct: 166 DPHEAGKPP 174


>sp|G3P_METST|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 DPKDAGKAPL 10
DP D K P+
Sbjct: 172 DPSDVKKGPI 181


>sp|Y1039_PYRHO|UNCHARACTERIZED ABC transporter extracellular-binding protein|Pyrococcus horikoshii

Query: 1 DPKDAGKAPL 10
DP D G PL
Sbjct: 292 DPNDLGLIPL 301


>sp|RL31_METKA|LARGE ribosomal subunit protein eL31|Methanopyrus kandleri (strain AV19

Query: 3 KDAGKAPL 10
+DA KAPL
Sbjct: 15 RDAKKAPL 22


>sp|Y078_METKA|UPF0285 protein MK0078|Methanopyrus kandleri (strain AV19 /

Query: 1 DPKDAGKAP 9
DP+ GKAP
Sbjct: 25 DPEFLGKAP 33




136|Sequence|676|685|GKAPLKIFAQ

>sp|ADEC_METBF|ADENINE deaminase|Methanosarcina barkeri (strain Fusaro /

Query: 2 KAPLKIF 8
KAPLK+F
Sbjct: 100 KAPLKVF 106


>sp|G3P_HALSA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GKAPLKIFAQ 10
G PLK +AQ
Sbjct: 258 GTGPLKEYAQ 267


>sp|G3P_HALS3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Halobacterium salinarum (strain ATCC 29341

Query: 1 GKAPLKIFAQ 10
G PLK +AQ
Sbjct: 258 GTGPLKEYAQ 267


>sp|Y1194_THEKO|UPF0212 protein TK1194|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 KAPLKIF 8
K PLK+F
Sbjct: 102 KVPLKVF 108


>sp|Y1358_THESM|UPF0212 protein TSIB_1358|Thermococcus sibiricus (strain DSM 12597

Query: 2 KAPLKIF 8
K PLK+F
Sbjct: 102 KVPLKVF 108




137|Sequence|681|690|KIFAQDGEGQ

>sp|DAPB_METVS|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 2 IFAQDGE 8
IFA DGE
Sbjct: 222 IFANDGE 228


>sp|FTHS_METLZ|FORMATE--TETRAHYDROFOLATE ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 KIFAQDGEG 9
++FA+ GEG
Sbjct: 412 EVFAKGGEG 420


>sp|ARGJ_METTH|GLUTAMATE N-acetyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 KIFAQDGEG 9
++ A+DGEG
Sbjct: 260 RMMARDGEG 268


>sp|FTHS_THEAC|FORMATE--TETRAHYDROFOLATE ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KIFAQDGEG 9
++FA+ GEG
Sbjct: 390 EVFAKGGEG 398


>sp|Y293_THEAC|PUTATIVE esterase Ta0293|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KIFAQDG 7
KIFA DG
Sbjct: 9 KIFAMDG 15


>sp|RL6_METBF|LARGE ribosomal subunit protein uL6|Methanosarcina barkeri (strain

Query: 1 KIFAQDGE 8
KI+ +DGE
Sbjct: 44 KIYVRDGE 51


>sp|ARGJ_METAC|GLUTAMATE N-acetyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KIFAQDGEG 9
K A+DGEG
Sbjct: 256 KKMARDGEG 264


>sp|ARGJ_METMA|GLUTAMATE N-acetyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KIFAQDGEG 9
K A+DGEG
Sbjct: 256 KKMAKDGEG 264




138|Sequence|686|695|DGEGQRIDIQ

>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 1 DGEGQRIDI 9
DGEG+RI I
Sbjct: 149 DGEGERIII 157


>sp|RPO3_METJA|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanocaldococcus jannaschii (strain

Query: 2 GEGQRIDIQ 10
G+GQRI I+
Sbjct: 115 GKGQRIQIE 123


>sp|RIFK_NATPD|RIBOFLAVIN kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GEGQRIDI 9
GEGQRI +
Sbjct: 66 GEGQRIAV 73


>sp|ILVD_METS5|DIHYDROXY-ACID dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 1 DGEGQRIDIQ 10
DGE R+D++
Sbjct: 506 DGEKGRLDVE 515


>sp|SYT_ARCFU|THREONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DGEGQRID 8
DG+G+R++
Sbjct: 26 DGKGERVE 33


>sp|NARB_HALMT|PUTATIVE respiratory nitrate reductase subunit|Haloferax mediterranei

Query: 1 DGEGQRID 8
DG+G RI+
Sbjct: 89 DGDGNRIE 96


>sp|MANB_METJA|PHOSPHOMANNOMUTASE jannaschii (strain ATCC 43067

Query: 1 DGEGQRIDI 9
DG+G R+ I
Sbjct: 237 DGDGDRLGI 245




139|Sequence|691|700|RIDIQMKNRM

>sp|YE1A_METJA|UNCHARACTERIZED protein MJ1417.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DIQMKNRM 10
DI+ KNRM
Sbjct: 83 DIEHKNRM 90




140|Sequence|696|705|MKNRMDGTYA

>sp|TRM10_THEKO|TRNA (guanine(9)-/adenine(9)-N1)-methyltransferase|Thermococcus

Query: 3 NRMDGTY 9
NR+DG+Y
Sbjct: 64 NRVDGSY 70


>sp|LONB_METJA|ARCHAEAL Lon protease|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MKNRMDGT 8
+KN+MD T
Sbjct: 315 LKNKMDNT 322


>sp|PUR2_METMP|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 MKNRMDGTYA 10
MKN+ G YA
Sbjct: 31 MKNKNPGIYA 40


>sp|Y1274_METB6|UPF0280 protein Mboo_1274|Methanoregula boonei (strain DSM 21154

Query: 3 NRMDGTYA 10
+R+DG YA
Sbjct: 200 SRVDGVYA 207


>sp|Y3528_METJA|UNCHARACTERIZED protein MJECL28|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KNRMDGTY 9
K R+DG Y
Sbjct: 136 KRRLDGVY 143


>sp|PUR2_METM7|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain C7 /

Query: 1 MKNRMDGTYA 10
MKN+ G YA
Sbjct: 31 MKNKNPGIYA 40


>sp|PUR2_METM5|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain C5 /

Query: 1 MKNRMDGTYA 10
MKN+ G YA
Sbjct: 31 MKNKNPGIYA 40


>sp|ACYP_PICTO|ACYLPHOSPHATASE torridus (strain ATCC 700027

Query: 1 MKNRMDGT 8
+KNR DGT
Sbjct: 30 IKNRDDGT 37




141|Sequence|701|710|DGTYACSYTP

>sp|BAST_HALS3|TRANSDUCER protein BasT|Halobacterium salinarum (strain ATCC 29341

Query: 1 DGTYACSYTP 10
DG YA +YTP
Sbjct: 260 DGRYATAYTP 269


>sp|GCSPB_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 1 DGTYACSYTP 10
DG Y+ SY P
Sbjct: 309 DGKYSLSYIP 318


>sp|Y1137_METTH|UNCHARACTERIZED protein MTH_1137|Methanothermobacter thermautotrophicus (strain

Query: 4 YACSYTP 10
Y C YTP
Sbjct: 311 YMCGYTP 317


>sp|PCP_THELN|PYRROLIDONE-CARBOXYLATE peptidase|Thermococcus litoralis (strain ATCC 51850

Query: 2 GTYACSY 8
GTY C+Y
Sbjct: 139 GTYLCNY 145


>sp|GLCD2_CALMQ|GLUCOSE 1-dehydrogenase 2|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 DGTYAC 6
DGTY C
Sbjct: 177 DGTYNC 182


>sp|GLCD1_PICTO|GLUCOSE 1-dehydrogenase 1|Picrophilus torridus (strain ATCC 700027

Query: 1 DGTYAC 6
DGTY C
Sbjct: 169 DGTYNC 174


>sp|PNPH_THEKO|PROBABLE 6-oxopurine nucleoside phosphorylase|Thermococcus kodakarensis

Query: 2 GTYACSYTP 10
GTYAC P
Sbjct: 159 GTYACMEGP 167


>sp|Y787_METJA|UNCHARACTERIZED protein MJ0787|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 YACSYTP 10
Y C Y+P
Sbjct: 322 YMCGYSP 328


>sp|SYP_METBU|PROLINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DGTYAC 6
DGTY C
Sbjct: 456 DGTYKC 461


>sp|Y1361_METJA|UNCHARACTERIZED protein MJ1361|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GTYAC 6
GTYAC
Sbjct: 133 GTYAC 137


>sp|MTIP_METAC|PROBABLE S-methyl-5'-thioinosine phosphorylase|Methanosarcina acetivorans

Query: 1 DGTYACSYTP 10
+G YAC+ P
Sbjct: 151 EGVYACTEGP 160


>sp|MCRZ_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 3 TYACSYTP 10
TY YTP
Sbjct: 2 TYKAQYTP 9


>sp|PURL_HALWD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DGTYACSY 8
DG Y C++
Sbjct: 349 DGNYVCTF 356


>sp|MTAP_CENSY|S-METHYL-5'-THIOADENOSINE phosphorylase|Cenarchaeum symbiosum (strain A)

Query: 2 GTYACSYTP 10
GTYAC P
Sbjct: 134 GTYACIEGP 142


>sp|PCP_PYRAB|PYRROLIDONE-CARBOXYLATE peptidase|Pyrococcus abyssi (strain GE5 /

Query: 2 GTYACSY 8
GTY C++
Sbjct: 138 GTYLCNF 144


>sp|PURL_NATPD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DGTYACSY 8
DG Y C++
Sbjct: 341 DGNYVCTF 348


>sp|PCP_PYRHO|PYRROLIDONE-CARBOXYLATE peptidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GTYACSY 8
GTY C++
Sbjct: 135 GTYLCNF 141


>sp|PURL_HALLT|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 DGTYACSY 8
DG Y C +
Sbjct: 351 DGNYVCEF 358


>sp|DAPA_METS3|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 DGTYACSYTP 10
+GTY TP
Sbjct: 4 EGTYVAMVTP 13


>sp|THI4_HALVD|THIAMINE thiazole synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 DGTYACS 7
DG +ACS
Sbjct: 110 DGPHACS 116




142|Sequence|706|715|CSYTPVKAIK

>sp|Y1061_METJA|UNCHARACTERIZED membrane protein MJ1061|Methanocaldococcus jannaschii (strain ATCC

Query: 1 CSYTPVKAIK 10
C Y P +A+K
Sbjct: 96 CEYNPFEAVK 105


>sp|METE_SULAC|METHIONINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 SYTPVKAIK 10
+YTPVK K
Sbjct: 241 NYTPVKLFK 249


>sp|Y1416_METJA|UNCHARACTERIZED protein MJ1416|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SYTPVKAI 9
+YTPVK +
Sbjct: 404 AYTPVKKV 411


>sp|CARB_METAC|CARBAMOYL phosphate synthase large chain|Methanosarcina acetivorans (strain

Query: 4 TPVKAIK 10
TPV+AIK
Sbjct: 118 TPVEAIK 124


>sp|BRIX_METBU|PROBABLE Brix domain-containing ribosomal biogenesis|Methanococcoides

Query: 3 YTPVKAIK 10
YTP+KA++
Sbjct: 86 YTPLKALE 93


>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 4 TPVKAIK 10
TPV+AIK
Sbjct: 118 TPVEAIK 124


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 4 TPVKAIK 10
TPV+AIK
Sbjct: 118 TPVEAIK 124


>sp|Y343_META3|UPF0280 protein Maeo_0343|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 CSYTPVK 7
SYTP+K
Sbjct: 49 TSYTPIK 55


>sp|Y007_METJA|PUTATIVE dehydratase subunit MJ0007|Methanocaldococcus jannaschii (strain

Query: 1 CSYTPVKAI 9
C+Y P++ I
Sbjct: 36 CAYVPIEII 44


>sp|DEOC_HALWD|DEOXYRIBOSE-PHOSPHATE aldolase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 SYTPVKA 8
SY PVKA
Sbjct: 174 SYLPVKA 180




143|Sequence|711|720|VKAIKHTIAV

>sp|CBIA_METS3|COBYRINATE a,c-diamide synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 VKAIKHTIA 9
V+A+K+TIA
Sbjct: 357 VQALKYTIA 365




144|Sequence|716|725|HTIAVVWGGV

>sp|FTTA_LOKSG|TRANSCRIPTION termination factor FttA|Lokiarchaeum sp. (strain GC14_75)

Query: 1 HTIAVVWGGV 10
HTI + WG V
Sbjct: 304 HTIPLSWGKV 313


>sp|Y1574_ARCFU|UNCHARACTERIZED protein AF_1574|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 AVVWGGV 10
A+VWGGV
Sbjct: 256 AIVWGGV 262


>sp|KORA_METTM|2-OXOGLUTARATE synthase subunit KorA|Methanothermobacter marburgensis (strain

Query: 3 IAVVWGGV 10
I VWGGV
Sbjct: 65 IGAVWGGV 72


>sp|COX1_HALSA|CYTOCHROME c oxidase polypeptide 1|Halobacterium salinarum (strain ATCC

Query: 2 TIAVVWGGV 10
TIA WGGV
Sbjct: 80 TIAFAWGGV 88


>sp|Y177_METMA|MACRO domain-containing protein MM_0177|Methanosarcina mazei (strain ATCC

Query: 1 HTIAVVWGG 9
HT+ VW G
Sbjct: 92 HTVGPVWQG 100


>sp|GCH1L_PYRAB|GTP cyclohydrolase 1 type 2|Pyrococcus abyssi (strain GE5 /

Query: 4 AVVWGGV 10
++WGGV
Sbjct: 65 GIIWGGV 71


>sp|MALE_PYRFU|MALTOTRIOSE-BINDING protein|Pyrococcus furiosus (strain ATCC 43587

Query: 3 IAVVWGGV 10
++ VWGGV
Sbjct: 394 MSAVWGGV 401


>sp|AMPPA_METMA|AMP phosphorylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 AVVWGG 9
A+VWGG
Sbjct: 230 ALVWGG 235


>sp|GATE_DESA1|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Desulfurococcus amylolyticus (strain DSM

Query: 4 AVVWGGV 10
A +WGGV
Sbjct: 340 ARIWGGV 346


>sp|FDHB1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 1 HTIAVVWGGV 10
H +WGG+
Sbjct: 72 HCAPTMWGGI 81


>sp|AMPPA_METAC|AMP phosphorylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 AVVWGG 9
A+VWGG
Sbjct: 229 ALVWGG 234


>sp|AMPPA_METBF|AMP phosphorylase|Methanosarcina barkeri (strain Fusaro /

Query: 4 AVVWGG 9
A+VWGG
Sbjct: 229 ALVWGG 234


>sp|HTR8_HALS3|TRANSDUCER protein Htr8|Halobacterium salinarum (strain ATCC 29341

Query: 1 HTIAV----VWGGV 10
HT A+ VWGG+
Sbjct: 177 HTAAINNPWVWGGI 190


>sp|AGAL_SACS2|ALPHA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 1 HTIAVVWGGV 10
H I WGG+
Sbjct: 307 HAINAHWGGM 316


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 HTIAVVWG 8
+T+A +WG
Sbjct: 247 YTVAEIWG 254


>sp|MALE_PYRAB|MALTOTRIOSE-BINDING protein|Pyrococcus abyssi (strain GE5 /

Query: 3 IAVVWGGV 10
+ VWGGV
Sbjct: 413 MGAVWGGV 420


>sp|EF2_ARCFU|ELONGATION factor 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 IAVVWGG 9
IAV+W G
Sbjct: 265 IAVIWKG 271


>sp|Y1562_METJA|PUTATIVE membrane protein MJ1562|Methanocaldococcus jannaschii (strain ATCC

Query: 3 IAVVWGG 9
IAV+W G
Sbjct: 254 IAVIWTG 260


>sp|OGT_PYRSN|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Pyrococcus sp. (strain NA2)

Query: 2 TIAVVW 7
TIA+VW
Sbjct: 15 TIAIVW 20


>sp|GCH1L_PYRHO|GTP cyclohydrolase 1 type 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 AVVWGGV 10
++WGG+
Sbjct: 65 GIIWGGI 71


>sp|Y1105_THEAC|UNCHARACTERIZED protein Ta1105|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 HTIAVVWGG 9
HT+ VW G
Sbjct: 88 HTVGPVWMG 96


>sp|AMPPA_METB6|AMP phosphorylase|Methanoregula boonei (strain DSM 21154

Query: 5 VVWGG 9
+VWGG
Sbjct: 233 IVWGG 237


>sp|PYRH_PYRAB|URIDYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 HTIAVVWGG 9
H IA+V GG
Sbjct: 36 HEIAIVVGG 44


>sp|AMPPA_HYPBU|AMP phosphorylase|Hyperthermus butylicus (strain DSM 5456

Query: 5 VVWGG 9
+VWGG
Sbjct: 232 IVWGG 236


>sp|PYRH_PYRHO|URIDYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 HTIAVVWGG 9
H IA+V GG
Sbjct: 36 HEIAIVVGG 44


>sp|AMPPA_METMJ|AMP phosphorylase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 AVVWGG 9
A+VWGG
Sbjct: 231 AIVWGG 236


>sp|Y2172_ARCFU|UNCHARACTERIZED protein AF_2172|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HTIAVVWG 8
+TI+V WG
Sbjct: 27 YTISVDWG 34


>sp|SYS2_METBF|TYPE-2 serine--tRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 HTIAVVWGG 9
H I +VW G
Sbjct: 352 HRIEIVWIG 360


>sp|GCH1L_ARCFU|GTP cyclohydrolase 1 type 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 AVVWGGV 10
++WGG+
Sbjct: 65 GLIWGGI 71




145|Sequence|721|730|VWGGVNIPHS

>sp|RL18_NANEQ|LARGE ribosomal subunit protein uL18|Nanoarchaeum equitans (strain

Query: 3 GGVNIPHS 10
G+NIPHS
Sbjct: 126 AGLNIPHS 133


>sp|RS7_METLZ|SMALL ribosomal subunit protein uS7|Methanocorpusculum labreanum (strain

Query: 2 WGGVNIPHS 10
+GG+N+P S
Sbjct: 120 YGGINVPKS 128


>sp|RS7_METHJ|SMALL ribosomal subunit protein uS7|Methanospirillum hungatei JF-1

Query: 2 WGGVNIPHS 10
+GG+N+P S
Sbjct: 120 YGGINVPKS 128


>sp|RS7_METB6|SMALL ribosomal subunit protein uS7|Methanoregula boonei (strain DSM

Query: 2 WGGVNIPHS 10
+GG+N+P S
Sbjct: 130 YGGINVPKS 138


>sp|PRIL_METMA|DNA primase large subunit PriL|Methanosarcina mazei (strain ATCC

Query: 1 VWGGVNIPHS 10
V GGVN+ HS
Sbjct: 238 VQGGVNLAHS 247


>sp|PRIL_METBF|DNA primase large subunit PriL|Methanosarcina barkeri (strain Fusaro /

Query: 1 VWGGVNIPHS 10
V GGVN+ HS
Sbjct: 238 VQGGVNLAHS 247


>sp|PRIL_METAC|DNA primase large subunit PriL|Methanosarcina acetivorans (strain ATCC

Query: 1 VWGGVNIPHS 10
V GGVN+ HS
Sbjct: 238 VQGGVNLAHS 247


>sp|RL18_ARCFU|LARGE ribosomal subunit protein uL18|Archaeoglobus fulgidus (strain ATCC

Query: 1 VWGGVNIPHS 10
V GG+ +PHS
Sbjct: 126 VEGGLEVPHS 135


>sp|RL18_PYRHO|LARGE ribosomal subunit protein uL18|Pyrococcus horikoshii (strain ATCC

Query: 3 GGVNIPHS 10
G+N+PHS
Sbjct: 127 AGLNVPHS 134


>sp|RL18_PYRAB|LARGE ribosomal subunit protein uL18|Pyrococcus abyssi (strain GE5 /

Query: 3 GGVNIPHS 10
G+N+PHS
Sbjct: 127 AGLNVPHS 134


>sp|MALQ_THEKO|4-ALPHA-GLUCANOTRANSFERASE kodakarensis (strain ATCC BAA-918

Query: 1 VWGGVNIPH 9
V+GGV +PH
Sbjct: 360 VFGGVYLPH 368


>sp|DAPAT_METS3|LL-DIAMINOPIMELATE aminotransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 VWGGVNIPH 9
V+GGVN P+
Sbjct: 340 VYGGVNSPY 348


>sp|RL18_PYRFU|LARGE ribosomal subunit protein uL18|Pyrococcus furiosus (strain ATCC

Query: 3 GGVNIPHS 10
G+N+PHS
Sbjct: 127 AGLNVPHS 134


>sp|Y755_METJA|UNCHARACTERIZED protein MJ0755|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GGVNIPH 9
GG+N PH
Sbjct: 325 GGINAPH 331


>sp|RL18_THEON|LARGE ribosomal subunit protein uL18|Thermococcus onnurineus (strain NA1)

Query: 3 GGVNIPHS 10
G+N+PHS
Sbjct: 127 AGLNVPHS 134


>sp|RL18_THEGJ|LARGE ribosomal subunit protein uL18|Thermococcus gammatolerans (strain

Query: 3 GGVNIPHS 10
G+N+PHS
Sbjct: 127 AGLNVPHS 134


>sp|CSM3_METJA|CRISPR system Cms endoribonuclease Csm3|Methanocaldococcus jannaschii

Query: 1 VWGGVN 6
+WGG+N
Sbjct: 241 IWGGIN 246


>sp|RL18_THESM|LARGE ribosomal subunit protein uL18|Thermococcus sibiricus (strain DSM

Query: 3 GGVNIPHS 10
G+N+PHS
Sbjct: 127 AGLNVPHS 134


>sp|PRIL_ARCFU|DNA primase large subunit PriL|Archaeoglobus fulgidus (strain ATCC

Query: 4 GVNIPHS 10
G+NIPH+
Sbjct: 279 GMNIPHT 285


>sp|MALQ_THELN|4-ALPHA-GLUCANOTRANSFERASE litoralis (strain ATCC 51850

Query: 1 VWGGVNIPH 9
V+GG+ +PH
Sbjct: 360 VFGGIYLPH 368


>sp|RL18_THEKO|LARGE ribosomal subunit protein uL18|Thermococcus kodakarensis (strain

Query: 3 GGVNIPHS 10
G+N+PHS
Sbjct: 127 AGLNVPHS 134


>sp|AMYA_PYRHO|ALPHA-AMYLASE horikoshii (strain ATCC 700860

Query: 1 VWGGVNIPH 9
V+GG+ +PH
Sbjct: 360 VFGGIYLPH 368


>sp|RL18_METTP|LARGE ribosomal subunit protein uL18|Methanothrix thermoacetophila

Query: 3 GGVNIPHS 10
GV++PHS
Sbjct: 126 AGVDVPHS 133


>sp|FPOM_METMA|F(420)H(2) dehydrogenase subunit M|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VWGGVNIPHS 10
+WGG N H+
Sbjct: 150 LWGGANRAHA 159


>sp|ASORS_PYRFU|ALIPHATIC sulfonate oxidoreductase, polyferredoxin-like subunit|Pyrococcus

Query: 4 GVNIPHS 10
G+N+PH+
Sbjct: 51 GINVPHT 57


>sp|PRIL_METAR|DNA primase large subunit PriL|Methanocella arvoryzae (strain DSM 22066

Query: 4 GVNIPHS 10
G+N+PH+
Sbjct: 238 GINLPHT 244


>sp|AMYA_PYRAB|ALPHA-AMYLASE abyssi (strain GE5 /

Query: 1 VWGGVNIPH 9
V+GG+ +PH
Sbjct: 360 VFGGIYLPH 368


>sp|PRIL_THEVO|DNA primase large subunit PriL|Thermoplasma volcanium (strain ATCC

Query: 4 GVNIPH 9
G+N+PH
Sbjct: 229 GINVPH 234


>sp|GATE_PYRAB|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus abyssi (strain GE5 /

Query: 2 WGGVNIP 8
WG V IP
Sbjct: 151 WGAVGIP 157


>sp|OFOA1_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 2 WGGVNIP 8
WG V IP
Sbjct: 529 WGSVKIP 535


>sp|ARGD_METAC|ACETYLORNITHINE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 GGVNIP 8
GG+NIP
Sbjct: 203 GGINIP 208


>sp|GATE_THESM|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermococcus sibiricus (strain DSM 12597

Query: 2 WGGVNIP 8
WG V IP
Sbjct: 148 WGSVGIP 154


>sp|GATE_THEKO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermococcus kodakarensis (strain ATCC

Query: 2 WGGVNIP 8
WG V IP
Sbjct: 148 WGSVGIP 154


>sp|GATE_THEGJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermococcus gammatolerans (strain DSM

Query: 2 WGGVNIP 8
WG V IP
Sbjct: 148 WGSVGIP 154


>sp|ARGD_METMA|ACETYLORNITHINE aminotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GGVNIP 8
GGVN+P
Sbjct: 203 GGVNVP 208


>sp|DAPAT_METTH|LL-DIAMINOPIMELATE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 2 WGGVNIPH 9
+GGVN P+
Sbjct: 340 YGGVNAPY 347


>sp|AMYA_PYRFU|ALPHA-AMYLASE furiosus (strain ATCC 43587

Query: 1 VWGGVNIPH 9
++GGV +PH
Sbjct: 361 LFGGVYLPH 369


>sp|SYI_HALMA|ISOLEUCINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 WGGVNIP 8
WG VN P
Sbjct: 541 WGTVNYP 547


>sp|RL18_METTH|LARGE ribosomal subunit protein uL18|Methanothermobacter

Query: 3 GGVNIPH 9
G+N+PH
Sbjct: 126 AGLNVPH 132


>sp|RL18_THEVO|LARGE ribosomal subunit protein uL18|Thermoplasma volcanium (strain ATCC

Query: 4 GVNIPH 9
GV+IPH
Sbjct: 119 GVDIPH 124


>sp|GATE_PYRHO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus horikoshii (strain ATCC

Query: 2 WGGVNIP 8
WG V IP
Sbjct: 151 WGTVGIP 157


>sp|GATE_PYRFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus furiosus (strain ATCC 43587

Query: 2 WGGVNIP 8
WG V IP
Sbjct: 147 WGTVGIP 153


>sp|CAPPA_PYRAE|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 GGVNIPH 9
GG+N PH
Sbjct: 240 GGLNNPH 246


>sp|CRUF_HALJT|BISANHYDROBACTERIORUBERIN hydratase|Haloarcula japonica (strain ATCC 49778

Query: 1 VWGGVNI 7
+WGG+N+
Sbjct: 248 LWGGINL 254


>sp|RL18_HALWD|LARGE ribosomal subunit protein uL18|Haloquadratum walsbyi (strain DSM

Query: 3 GGVNIPHS 10
GV+IPH+
Sbjct: 126 AGVSIPHN 133


>sp|DAPAT_METST|LL-DIAMINOPIMELATE aminotransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 VWGGVNIPH 9
V+GGV+ P+
Sbjct: 340 VYGGVDSPY 348


>sp|Y1312_METJA|UPF0026 protein MJ1312|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VWGGVNIPH 9
+W +N PH
Sbjct: 137 IWREINRPH 145


>sp|GCH1L_PYRAB|GTP cyclohydrolase 1 type 2|Pyrococcus abyssi (strain GE5 /

Query: 1 VWGGVN 6
+WGGV+
Sbjct: 67 IWGGVS 72


>sp|SYS_ARCFU|SERINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VWGGVNIPH 9
+W G+ IP+
Sbjct: 327 LWQGLGIPY 335


>sp|PRIL_METBU|DNA primase large subunit PriL|Methanococcoides burtonii (strain DSM

Query: 1 VWGGVNIPHS 10
V GVN+ HS
Sbjct: 245 VRAGVNLAHS 254


>sp|CUTA_SULAC|GLYCERALDEHYDE dehydrogenase large chain|Sulfolobus acidocaldarius (strain ATCC

Query: 1 VWGGVNIPH 9
VW +PH
Sbjct: 211 VWYSTQVPH 219


>sp|MALE_PYRFU|MALTOTRIOSE-BINDING protein|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VWGGVN 6
VWGGV+
Sbjct: 397 VWGGVD 402


>sp|TRM56_METS5|TRNA (cytidine(56)-2'-O)-methyltransferase|Metallosphaera sedula

Query: 4 GVNIPH 9
G+N+PH
Sbjct: 84 GINLPH 89


>sp|SYM_THEAC|METHIONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 WGGVNIPH 9
+GG N+P+
Sbjct: 313 YGGFNLPY 320


>sp|Y609_METJA|UNCHARACTERIZED protein MJ0609|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VWGGVNIPHS 10
++GG N+ +S
Sbjct: 292 IYGGANVAYS 301


>sp|SYS2_METBU|TYPE-2 serine--tRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 GGVNIPH 9
G +NIPH
Sbjct: 112 GNMNIPH 118


>sp|RTCA_DESA1|RNA 3'-terminal phosphate cyclase|Desulfurococcus amylolyticus (strain

Query: 3 GGVNIPHS 10
GG N+P S
Sbjct: 121 GGTNVPWS 128




146|Sequence|726|735|NIPHSPYRVN

>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PHSPYRV 9
P+SPYRV
Sbjct: 424 PYSPYRV 430


>sp|ENDA_METMA|TRNA-SPLICING endonuclease|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IPHSPYRVN 10
IPHS Y VN
Sbjct: 298 IPHSEYLVN 306


>sp|ENDA_METBF|TRNA-SPLICING endonuclease|Methanosarcina barkeri (strain Fusaro /

Query: 2 IPHSPYRVN 10
IPHS Y VN
Sbjct: 295 IPHSEYLVN 303


>sp|ENDA_METAC|TRNA-SPLICING endonuclease|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 IPHSPYRVN 10
IPHS Y VN
Sbjct: 295 IPHSEYLVN 303


>sp|DADD_METB6|5'-DEOXYADENOSINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 3 PHSPYRVN 10
PH+PY V+
Sbjct: 192 PHAPYTVS 199


>sp|DPHB_METST|DIPHTHINE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 PHSPY 7
PHSPY
Sbjct: 143 PHSPY 147


>sp|DADD_METS3|5'-DEOXYADENOSINE deaminase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 PHSPY 7
PHSPY
Sbjct: 184 PHSPY 188


>sp|ILVD_PYRAR|DIHYDROXY-ACID dehydratase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 NIPHSPY 7
N PH PY
Sbjct: 17 NAPHRPY 23


>sp|DADD_METHJ|5'-DEOXYADENOSINE deaminase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 PHSPYRV 9
PH+PY V
Sbjct: 199 PHAPYTV 205


>sp|SDO1_ARCFU|RIBOSOME maturation protein SDO1 homolog|Archaeoglobus fulgidus (strain ATCC

Query: 1 NIPHSPYRV 9
N PH P R+
Sbjct: 117 NAPHPPSRI 125


>sp|RL18_PYRFU|LARGE ribosomal subunit protein uL18|Pyrococcus furiosus (strain ATCC

Query: 1 NIPHSP 6
N+PHSP
Sbjct: 130 NVPHSP 135


>sp|DADD_METTH|5'-DEOXYADENOSINE deaminase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 PHSPY 7
PHSPY
Sbjct: 182 PHSPY 186


>sp|RL18_PYRAB|LARGE ribosomal subunit protein uL18|Pyrococcus abyssi (strain GE5 /

Query: 1 NIPHSP 6
N+PHSP
Sbjct: 130 NVPHSP 135


>sp|RL18_PYRHO|LARGE ribosomal subunit protein uL18|Pyrococcus horikoshii (strain ATCC

Query: 1 NIPHSP 6
N+PHSP
Sbjct: 130 NVPHSP 135


>sp|SDO1_METJA|RIBOSOME maturation protein SDO1 homolog|Methanocaldococcus jannaschii

Query: 1 NIPHSPYRV 9
+ PH P+R+
Sbjct: 122 DTPHPPHRI 130


>sp|RL18_KORCO|LARGE ribosomal subunit protein uL18|Korarchaeum cryptofilum (strain

Query: 1 NIPHSP 6
++PHSP
Sbjct: 129 DVPHSP 134


>sp|MTAD_THESM|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Thermococcus sibiricus (strain DSM 12597

Query: 3 PHSPY 7
PH+PY
Sbjct: 180 PHAPY 184


>sp|MTAD_THEON|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Thermococcus onnurineus (strain NA1)

Query: 3 PHSPY 7
PH+PY
Sbjct: 180 PHAPY 184


>sp|MTAD_PYRHO|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PHSPY 7
PH+PY
Sbjct: 180 PHAPY 184


>sp|MTAD_PYRFU|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PHSPY 7
PH+PY
Sbjct: 178 PHAPY 182


>sp|MTAD_PYRAB|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus abyssi (strain GE5 /

Query: 3 PHSPY 7
PH+PY
Sbjct: 183 PHAPY 187


>sp|MTAD2_ARCFU|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PHSPY 7
PH+PY
Sbjct: 177 PHAPY 181


>sp|DADD_METKA|5'-DEOXYADENOSINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 3 PHSPY 7
PH+PY
Sbjct: 184 PHAPY 188


>sp|DADD_METST|5'-DEOXYADENOSINE deaminase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 PHSPY 7
PH+PY
Sbjct: 182 PHAPY 186


>sp|TPSP_THETK|BIFUNCTIONAL trehalose-6-phosphate synthase/phosphatase|Thermoproteus tenax

Query: 2 IPHSPY 7
+PH PY
Sbjct: 509 VPHYPY 514


>sp|RL11_DESA1|LARGE ribosomal subunit protein uL11|Desulfurococcus amylolyticus

Query: 5 SPYRVN 10
SPY+VN
Sbjct: 26 SPYKVN 31


>sp|MTAD_THEKO|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 PHSPY 7
PH+PY
Sbjct: 180 PHAPY 184


>sp|DADD_METVS|5'-DEOXYADENOSINE deaminase|Methanococcus vannielii (strain ATCC 35089

Query: 3 PHSPY 7
PH+PY
Sbjct: 177 PHAPY 181


>sp|RS6E_STAMF|SMALL ribosomal subunit protein eS6|Staphylothermus marinus (strain

Query: 1 NIPHSPYRVN 10
NIP + RVN
Sbjct: 86 NIPENEVRVN 95


>sp|DADD_METM7|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C7 /

Query: 3 PHSPY 7
PH+PY
Sbjct: 177 PHAPY 181


>sp|DADD_METMP|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain DSM 14266

Query: 3 PHSPY 7
PH+PY
Sbjct: 177 PHAPY 181


>sp|DADD_METM5|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C5 /

Query: 3 PHSPY 7
PH+PY
Sbjct: 177 PHAPY 181


>sp|TBP_SULTO|TATA-BOX-BINDING protein|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 NIPHSPYR 8
NIP PY+
Sbjct: 3 NIPEIPYK 10


>sp|DADD_METM6|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C6 /

Query: 3 PHSPY 7
PH+PY
Sbjct: 177 PHAPY 181


>sp|RL18_METTP|LARGE ribosomal subunit protein uL18|Methanothrix thermoacetophila

Query: 1 NIPHSP 6
++PHSP
Sbjct: 129 DVPHSP 134


>sp|AGL7_HALVD|LOW-SALT glycan biosynthesis sulfotransferase Agl7|Haloferax volcanii

Query: 3 PHSPY 7
PH+PY
Sbjct: 137 PHAPY 141


>sp|DAPAT_METTH|LL-DIAMINOPIMELATE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 2 IPHSPYRV 9
IPHS Y V
Sbjct: 227 IPHSIYEV 234


>sp|DADD_METJA|5'-DEOXYADENOSINE deaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PHSPY 7
PH+PY
Sbjct: 175 PHAPY 179


>sp|ENDA_METBU|TRNA-SPLICING endonuclease|Methanococcoides burtonii (strain DSM 6242

Query: 2 IPHSPYRVN 10
IPHS Y ++
Sbjct: 296 IPHSEYLIH 304


>sp|KMT_SACI5|PROTEIN-LYSINE N-methyltransferase|Saccharolobus islandicus (strain REY15A)

Query: 2 IPHSPY 7
+PH PY
Sbjct: 4 VPHVPY 9


>sp|GLNA_METJA|GLUTAMINE synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PHSPYR 8
PH+P+R
Sbjct: 152 PHNPHR 157


>sp|Y703_ARCFU|UNCHARACTERIZED protein AF_0703|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PHSPYR 8
PHSP R
Sbjct: 35 PHSPLR 40




147|Sequence|731|740|PYRVNIGQGS

>sp|WECB_METMP|UDP-N-ACETYLGLUCOSAMINE 2-epimerase|Methanococcus maripaludis (strain DSM 14266

Query: 2 YRVNIGQGS 10
Y +NIG GS
Sbjct: 57 YNLNIGSGS 65


>sp|WECBH_METMP|UDP-N-ACETYLGLUCOSAMINE 2-epimerase homolog|Methanococcus maripaludis (strain DSM 14266

Query: 2 YRVNIGQGS 10
Y +NIG GS
Sbjct: 57 YNLNIGSGS 65


>sp|RL11_DESA1|LARGE ribosomal subunit protein uL11|Desulfurococcus amylolyticus

Query: 1 PYRVNIGQ 8
PY+VNI Q
Sbjct: 27 PYKVNIPQ 34


>sp|APGM1_METTH|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanothermobacter thermautotrophicus

Query: 1 PYRVNIGQG 9
PYRV G+G
Sbjct: 68 PYRVYTGRG 76


>sp|SYFB_PYRAE|PHENYLALANINE--TRNA ligase beta subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PYRVNI 6
PYR+N+
Sbjct: 308 PYRINV 313


>sp|DHQS_NATPD|3-DEHYDROQUINATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PYRVNIG 7
P+RVN G
Sbjct: 268 PFRVNAG 274


>sp|DHQS_METVS|3-DEHYDROQUINATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 PYRVNIG 7
P+RVN G
Sbjct: 241 PFRVNAG 247


>sp|DHQS_METTP|3-DEHYDROQUINATE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PYRVNIG 7
P+RVN G
Sbjct: 243 PFRVNAG 249


>sp|DHQS_METTH|3-DEHYDROQUINATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PYRVNIG 7
P+RVN G
Sbjct: 254 PFRVNAG 260


>sp|DHQS_METST|3-DEHYDROQUINATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PYRVNIG 7
P+RVN G
Sbjct: 239 PFRVNAG 245


>sp|DHQS_METS3|3-DEHYDROQUINATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 PYRVNIG 7
P+RVN G
Sbjct: 248 PFRVNAG 254


>sp|DHQS_METPE|3-DEHYDROQUINATE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 PYRVNIG 7
P+RVN G
Sbjct: 208 PFRVNAG 214


>sp|DHQS_METMP|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 PYRVNIG 7
P+RVN G
Sbjct: 241 PFRVNAG 247


>sp|DHQS_METMJ|3-DEHYDROQUINATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PYRVNIG 7
P+RVN G
Sbjct: 208 PFRVNAG 214


>sp|DHQS_METM7|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 PYRVNIG 7
P+RVN G
Sbjct: 241 PFRVNAG 247


>sp|DHQS_METM6|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 PYRVNIG 7
P+RVN G
Sbjct: 241 PFRVNAG 247


>sp|DHQS_METM5|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 PYRVNIG 7
P+RVN G
Sbjct: 241 PFRVNAG 247


>sp|DHQS_METJA|3-DEHYDROQUINATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PYRVNIG 7
P+RVN G
Sbjct: 241 PFRVNAG 247


>sp|DHQS_META3|3-DEHYDROQUINATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PYRVNIG 7
P+RVN G
Sbjct: 241 PFRVNAG 247


>sp|DHQS_HALWD|3-DEHYDROQUINATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PYRVNIG 7
P+RVN G
Sbjct: 280 PFRVNAG 286


>sp|DHQS_HALSA|3-DEHYDROQUINATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 PYRVNIG 7
P+RVN G
Sbjct: 267 PFRVNAG 273


>sp|DHQS_HALS3|3-DEHYDROQUINATE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 PYRVNIG 7
P+RVN G
Sbjct: 267 PFRVNAG 273


>sp|DHQS_HALMA|3-DEHYDROQUINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PYRVNIG 7
P+RVN G
Sbjct: 268 PFRVNAG 274


>sp|DHQS_ARCFU|3-DEHYDROQUINATE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PYRVNIG 7
P+RVN G
Sbjct: 204 PFRVNAG 210


>sp|DHQS_METB6|3-DEHYDROQUINATE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 PYRVNIG 7
P+RVN G
Sbjct: 208 PFRVNAG 214


>sp|DHQS_METAR|3-DEHYDROQUINATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 PYRVNIG 7
P+RVN G
Sbjct: 255 PFRVNAG 261


>sp|WECB_METJA|UDP-N-ACETYLGLUCOSAMINE 2-epimerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YRVNIGQGS 10
Y +NIG G+
Sbjct: 58 YNLNIGSGT 66


>sp|CBIA_METM5|COBYRINATE a,c-diamide synthase|Methanococcus maripaludis (strain C5 /

Query: 2 YRVNIGQG 9
YR+N G+G
Sbjct: 403 YRINRGKG 410


>sp|GCST_NATPD|PROBABLE aminomethyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PYRVNIG 7
PY NIG
Sbjct: 249 PYEANIG 255


>sp|CBIA_METM7|COBYRINATE a,c-diamide synthase|Methanococcus maripaludis (strain C7 /

Query: 2 YRVNIGQG 9
YR+N G+G
Sbjct: 403 YRINRGKG 410


>sp|DHQS_METBU|3-DEHYDROQUINATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PYRVNIG 7
P+RVN G
Sbjct: 260 PFRVNAG 266


>sp|DHQS_METAC|3-DEHYDROQUINATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PYRVNIG 7
P+RVN G
Sbjct: 261 PFRVNAG 267


>sp|DHQS_METKA|3-DEHYDROQUINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 PYRVNIG 7
P+RVN G
Sbjct: 279 PFRVNAG 285


>sp|DHQS_METLZ|3-DEHYDROQUINATE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 PYRVNIG 7
P+RVN G
Sbjct: 226 PFRVNAG 232


>sp|DHQS_NITMS|3-DEHYDROQUINATE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 PYRVNIG 7
P+RVN G
Sbjct: 231 PFRVNAG 237


>sp|DHQS_METHJ|3-DEHYDROQUINATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PYRVNIG 7
P+RVN G
Sbjct: 208 PFRVNAG 214


>sp|DHQS_METBF|3-DEHYDROQUINATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PYRVNIG 7
P+RVN G
Sbjct: 261 PFRVNAG 267


>sp|DHQS_METMA|3-DEHYDROQUINATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PYRVNIG 7
P+RVN G
Sbjct: 261 PFRVNAG 267


>sp|DHQS_CENSY|3-DEHYDROQUINATE synthase|Cenarchaeum symbiosum (strain A)

Query: 1 PYRVNIG 7
P+RVN G
Sbjct: 216 PFRVNAG 222


>sp|GCSPA_PYRFU|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus furiosus

Query: 1 PYRVNIGQG 9
PY+ I QG
Sbjct: 99 PYQAEISQG 107


>sp|RS14Z_METVA|SMALL ribosomal subunit protein uS14|Methanococcus vannielii

Query: 1 PYRVNIGQGS 10
P++ GQGS
Sbjct: 5 PFKTKYGQGS 14


>sp|GCSPA_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 1 PYRVNIGQG 9
PY+ I QG
Sbjct: 109 PYQAEISQG 117


>sp|RS14Z_METMP|SMALL ribosomal subunit protein uS14|Methanococcus maripaludis (strain

Query: 1 PYRVNIGQGS 10
P++ GQGS
Sbjct: 5 PFKTKYGQGS 14


>sp|TRIN_SULTO|PUTATIVE Tricorn-like protease N-terminal subunit|Sulfurisphaera tokodaii

Query: 1 PYRVNIGQG 9
P RV GQG
Sbjct: 51 PIRVTSGQG 59




148|Sequence|736|745|IGQGSHPQKV

>sp|PDAD1_METMA|PYRUVOYL-DEPENDENT arginine decarboxylase 1|Methanosarcina mazei (strain ATCC

Query: 2 GQGSHPQKV 10
G G+HP+K+
Sbjct: 15 GAGTHPEKL 23


>sp|SRP54_ARCFU|SIGNAL recognition particle 54 kDa|Archaeoglobus fulgidus (strain ATCC

Query: 1 IGQGSHPQKV 10
IG G+ PQ+V
Sbjct: 392 IGSGTSPQEV 401


>sp|T1R1_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 4 GSHPQKV 10
GS+PQK+
Sbjct: 823 GSYPQKI 829


>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii (strain

Query: 1 IGQGSHPQK 9
+G G HP+K
Sbjct: 923 LGLGKHPRK 931


>sp|DPOL_METJA|DNA polymerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GSHPQKV 10
+HPQKV
Sbjct: 97 ATHPQKV 103


>sp|PRIS_METPE|DNA primase small subunit PriS|Methanosphaerula palustris (strain ATCC

Query: 4 GSHPQKV 10
G HP+KV
Sbjct: 247 GDHPEKV 253


>sp|SYL_AERPE|LEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 IGQGSHP 7
+G+G HP
Sbjct: 171 VGKGRHP 177


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IGQGSHPQK 9
I +GSHP K
Sbjct: 172 IVKGSHPVK 180


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 IGQGSHPQK 9
I +GSHP K
Sbjct: 172 IVKGSHPVK 180


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 IGQGSHPQK 9
I +GSHP K
Sbjct: 172 IVKGSHPVK 180


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IGQGSHPQK 9
I +GSHP K
Sbjct: 172 IVKGSHPVK 180


>sp|SUI1_PYRAE|PROTEIN translation factor SUI1 homolog|Pyrobaculum aerophilum (strain

Query: 3 QGSHPQKV 10
QG H QK+
Sbjct: 90 QGDHRQKI 97




149|Sequence|741|750|HPQKVKVFGP

>sp|RNP1_METBU|RIBONUCLEASE P protein component 1|Methanococcoides burtonii (strain DSM 6242

Query: 1 HPQKVKVFG 9
H Q+VK+FG
Sbjct: 73 HDQRVKIFG 81


>sp|ACDB_METKA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanopyrus kandleri

Query: 2 PQKVKVFGP 10
P KV+V GP
Sbjct: 50 PDKVEVIGP 58


>sp|SYV_SULAC|VALINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PQKVKVFGP 10
P VK++GP
Sbjct: 782 PISVKIYGP 790


>sp|AROC_THEGJ|CHORISMATE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 HPQKVKVFG 9
+P KVK FG
Sbjct: 104 YPAKVKFFG 112


>sp|Y1115_METJA|UNCHARACTERIZED protein MJ1115|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PQKVKVFG 9
P K+KVF
Sbjct: 143 PSKIKVFA 150


>sp|CHED_METBF|PROBABLE chemoreceptor glutamine deamidase CheD|Methanosarcina barkeri

Query: 2 PQKVKVFG 9
P K+K FG
Sbjct: 12 PVKIKTFG 19


>sp|PELO_PYRAE|PROTEIN pelota homolog|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 HPQKVKVFGP 10
+P KV V GP
Sbjct: 190 NPDKVVVTGP 199


>sp|DNAK_METTP|CHAPERONE protein DnaK|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 KVKVFG 9
KVKVFG
Sbjct: 82 KVKVFG 87


>sp|Y374_METJA|UNCHARACTERIZED protein MJ0374|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HPQKVKVFG 9
HP +K+FG
Sbjct: 81 HPIFIKLFG 89


>sp|SYFB_METTP|PHENYLALANINE--TRNA ligase beta subunit|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 HPQKVKVFG 9
HP+ + FG
Sbjct: 517 HPEVISAFG 525




150|Sequence|746|755|KVFGPGVERS

>sp|CDC6_THEVO|ORC1-TYPE DNA replication protein|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KVFGPGV 7
KVFGPGV
Sbjct: 220 KVFGPGV 226


>sp|DNAG_IGNH4|DNA primase DnaG|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 GPGVERS 10
GPGVERS
Sbjct: 158 GPGVERS 164


>sp|KPRS_METTH|RIBOSE-PHOSPHATE pyrophosphokinase|Methanothermobacter thermautotrophicus (strain

Query: 1 KVFGPGVER 9
K+F GVER
Sbjct: 251 KIFSAGVER 259


>sp|HEM1_NATPD|GLUTAMYL-TRNA reductase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 KVFGPGVE 8
++FGPG+E
Sbjct: 409 QLFGPGLE 416


>sp|HISX_PICTO|HISTIDINOL dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 1 KVFGPG 6
K+FGPG
Sbjct: 175 KIFGPG 180


>sp|PRNK_PYRHO|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase PH0197|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VFGPGVE 8
++GPGVE
Sbjct: 146 IYGPGVE 152


>sp|CMR4_PYRFU|CRISPR system Cmr endoribonuclease Cmr4|Pyrococcus furiosus (strain ATCC

Query: 1 KVFGPGVERS 10
K+FGP E++
Sbjct: 66 KIFGPPTEKA 75


>sp|MAAL_HALMA|METHYLASPARTATE ammonia-lyase|Haloarcula marismortui (strain ATCC 43049

Query: 1 KVFGPGVERS 10
KVFGP +R+
Sbjct: 246 KVFGPPYDRT 255


>sp|HISX_THEKO|HISTIDINOL dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KVFGPG 6
K+FGPG
Sbjct: 176 KIFGPG 181


>sp|HISX_PYRFU|HISTIDINOL dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KVFGPG 6
K+FGPG
Sbjct: 175 KIFGPG 180


>sp|PELO_CENSY|PROTEIN pelota homolog|Cenarchaeum symbiosum (strain A)

Query: 2 VFGPGVER 9
VFGPG R
Sbjct: 193 VFGPGETR 200


>sp|RAMA_METBA|[CO(II) methylated amine-specific corrinoid protein]|Methanosarcina barkeri

Query: 2 VFGPGVE 8
+ GPG+E
Sbjct: 291 ILGPGIE 297


>sp|SYL_PYRIL|LEUCINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 FGPGVER 9
FGPG R
Sbjct: 830 FGPGARR 836


>sp|DNAG_AERPE|DNA primase DnaG|Aeropyrum pernix (strain ATCC 700893

Query: 4 GPGVERS 10
GPGVE++
Sbjct: 161 GPGVEKA 167


>sp|AROK_ARCFU|SHIKIMATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KVFGPGVER 9
KVF GVER
Sbjct: 41 KVFVNGVER 49




151|Sequence|751|760|GVERSGLKAN

>sp|TRPF_ARCFU|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GVERSGLK 8
GVER GLK
Sbjct: 175 GVERDGLK 182


>sp|PYRH_NATPD|URIDYLATE kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 VERSGLKA 9
+ERSGL+A
Sbjct: 192 IERSGLRA 199


>sp|CBID_SACI6|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 VERSGLKAN 10
V RSGLKA
Sbjct: 104 VTRSGLKAT 112


>sp|CBID_SACI4|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 VERSGLKAN 10
V RSGLKA
Sbjct: 104 VTRSGLKAT 112


>sp|CBID_SACI3|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 2 VERSGLKAN 10
V RSGLKA
Sbjct: 104 VTRSGLKAT 112


>sp|CBID_SACI7|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 VERSGLKAN 10
V RSGLKA
Sbjct: 104 VTRSGLKAT 112


>sp|CBID_SACI1|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 VERSGLKAN 10
V RSGLKA
Sbjct: 104 VTRSGLKAT 112


>sp|CBID_SACS2|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 2 VERSGLKAN 10
V RSGLKA
Sbjct: 104 VTRSGLKAT 112


>sp|TRPF_THEKO|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GVERSGLK 8
GVER+G+K
Sbjct: 186 GVERNGVK 193


>sp|RISB_PYRFU|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GVERSGLKAN 10
+ RSG+K+N
Sbjct: 123 AISRSGIKSN 132


>sp|RISB_THEON|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Thermococcus onnurineus (strain NA1)

Query: 1 GVERSGLKAN 10
G+ R+G+K+N
Sbjct: 124 GLNRAGIKSN 133


>sp|SURE_HALMA|5'-NUCLEOTIDASE SurE|Haloarcula marismortui (strain ATCC 43049

Query: 1 GVERSGLKA 9
G+E +GL+A
Sbjct: 13 GIESAGLRA 21


>sp|PUR5_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GVERSGLKAN 10
G+E SG+ AN
Sbjct: 171 GLESSGIHAN 180


>sp|CBID_SACI2|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 VERSGLKA 9
V RSGLKA
Sbjct: 104 VTRSGLKA 111


>sp|Y476_ARCFU|UNCHARACTERIZED protein AF_0476|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 ERSGLKA 9
ER+GLKA
Sbjct: 29 ERAGLKA 35


>sp|DAPB_METTH|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 VERSGLKA 9
+ERSG++A
Sbjct: 118 IERSGVRA 125


>sp|Y303_PYRFU|UPF0284 protein PF0303|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GVERSGLKAN 10
G+E GLK N
Sbjct: 184 GIEFGGLKGN 193




152|Sequence|756|765|GLKANEPTHF

>sp|DPCKG_PYRIL|GTP-DEPENDENT dephospho-CoA kinase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GLKANEPTHF 10
GLK ++PT F
Sbjct: 74 GLKIDKPTFF 83


>sp|TRPC_THEAC|INDOLE-3-GLYCEROL phosphate synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 NEPTHF 10
+EPTHF
Sbjct: 78 SEPTHF 83


>sp|AATA_SACS2|A-TYPE ATP synthase subunit A|Saccharolobus solfataricus (strain ATCC

Query: 1 GLKANEPTH 9
G+K NEP +
Sbjct: 57 GIKPNEPVY 65


>sp|ARGC_METJA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GLKANEPTHF 10
G+K E THF
Sbjct: 183 GIKPTETTHF 192


>sp|AATA_SACI1|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 GLKANEPTH 9
G+K NEP +
Sbjct: 57 GIKPNEPVY 65


>sp|AATA_SACI7|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 GLKANEPTH 9
G+K NEP +
Sbjct: 57 GIKPNEPVY 65


>sp|AATA_SACI6|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.4 /

Query: 1 GLKANEPTH 9
G+K NEP +
Sbjct: 57 GIKPNEPVY 65


>sp|AATA_SACI4|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GLKANEPTH 9
G+K NEP +
Sbjct: 57 GIKPNEPVY 65


>sp|AATA_SACI3|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.27)

Query: 1 GLKANEPTH 9
G+K NEP +
Sbjct: 57 GIKPNEPVY 65


>sp|AATA_SACI2|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain L.S.2.15

Query: 1 GLKANEPTH 9
G+K NEP +
Sbjct: 57 GIKPNEPVY 65




153|Sequence|761|770|EPTHFTVDCT

>sp|ASSY_METKA|ARGININOSUCCINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 4 HFTVDC 9
HFTVDC
Sbjct: 58 HFTVDC 63


>sp|Y401_METMA|UPF0228 protein MM_0401|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PTHFTVDC 9
P ++T+DC
Sbjct: 55 PVNYTIDC 62


>sp|CYAS_METAR|CYSTEATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 2 PTHFTVDC 9
P H+T++C
Sbjct: 16 PDHYTLNC 23


>sp|TRPC_THEAC|INDOLE-3-GLYCEROL phosphate synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EPTHFT 6
EPTHF+
Sbjct: 79 EPTHFS 84


>sp|SYY_PYRHO|TYROSINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EPTHFTV 7
EPT FTV
Sbjct: 301 EPTEFTV 307


>sp|SYY_THESM|TYROSINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 1 EPTHFTV 7
EPT FT+
Sbjct: 301 EPTEFTI 307


>sp|SYY_THEON|TYROSINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 EPTHFTV 7
EPT FT+
Sbjct: 301 EPTEFTI 307


>sp|SYY_THEKO|TYROSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EPTHFTV 7
EPT FT+
Sbjct: 301 EPTEFTI 307


>sp|SYY_THEGJ|TYROSINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 EPTHFTV 7
EPT FT+
Sbjct: 301 EPTEFTI 307


>sp|SYY_PYRFU|TYROSINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EPTHFTV 7
EPT FT+
Sbjct: 301 EPTEFTI 307


>sp|SYY_PYRAB|TYROSINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 EPTHFTV 7
EPT FT+
Sbjct: 301 EPTEFTI 307


>sp|SYG_METJA|GLYCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EPTHFTVDC 9
E H+ +DC
Sbjct: 306 EMAHYAIDC 314


>sp|Y243_ARCFU|UNCHARACTERIZED protein AF_0243|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EPTHFTVD 8
E T+FT+D
Sbjct: 39 EATYFTID 46


>sp|SYG_METTH|GLYCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 EPTHFTVDC 9
E H+ +DC
Sbjct: 301 EMAHYAIDC 309


>sp|IF2G_HALMA|TRANSLATION initiation factor 2 subunit|Haloarcula marismortui (strain ATCC

Query: 1 EPTHFTVD 8
EP FTVD
Sbjct: 63 EPEAFTVD 70




154|Sequence|766|775|TVDCTEAGEG

>sp|TOP6A_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 2 VDCTEAGEG 10
VDCT+ G G
Sbjct: 165 VDCTKLGTG 173


>sp|Y3024_HALLT|UNCHARACTERIZED protein Hlac_3024|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 TVDCTEAGEG 10
TV+C GEG
Sbjct: 22 TVECPACGEG 31


>sp|TRPD_METMJ|ANTHRANILATE phosphoribosyltransferase|Methanoculleus marisnigri (strain ATCC

Query: 1 TVDCTEAG 8
T+DCTE G
Sbjct: 247 TLDCTEFG 254


>sp|Y1620_METJA|UNCHARACTERIZED protein MJ1620|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VDCTEAGEG 10
+DC +G+G
Sbjct: 6 IDCLASGDG 14


>sp|TF2B_SULAC|TRANSCRIPTION initiation factor IIB|Sulfolobus acidocaldarius (strain ATCC

Query: 4 CTEAGE 9
CTE GE
Sbjct: 29 CTETGE 34


>sp|TF2B_SULTO|TRANSCRIPTION initiation factor IIB|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 CTEAGE 9
CTE GE
Sbjct: 30 CTETGE 35


>sp|PDXT_METBU|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcoides burtonii

Query: 5 TEAGEG 10
TEAGEG
Sbjct: 149 TEAGEG 154




155|Sequence|771|780|EAGEGDVSVG

>sp|PRIS_PYRNV|DNA primase small subunit PriS|Pyrobaculum neutrophilum (strain DSM

Query: 1 EAGEGDVSV 9
+AGEGDV V
Sbjct: 285 DAGEGDVKV 293


>sp|GLME_HALMA|GLUTAMATE mutase epsilon subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 EAGEGDVSVG 10
EAG+GDV+ G
Sbjct: 376 EAGDGDVAQG 385


>sp|GLME_HALSA|GLUTAMATE mutase epsilon subunit|Halobacterium salinarum (strain ATCC 700922

Query: 1 EAGEGDVSVG 10
EAG+GD++ G
Sbjct: 376 EAGDGDIARG 385


>sp|PDXS_METMA|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanosarcina mazei (strain

Query: 1 EAGEGDVS 8
EAG GDVS
Sbjct: 158 EAGTGDVS 165


>sp|PDXS_METAC|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanosarcina acetivorans

Query: 1 EAGEGDVS 8
EAG GDVS
Sbjct: 158 EAGTGDVS 165


>sp|HELS_AERPE|ATP-DEPENDENT DNA helicase Hel308|Aeropyrum pernix (strain ATCC 700893

Query: 2 AGEGDVSVG 10
A EG+VS+G
Sbjct: 435 APEGEVSIG 443


>sp|CDC62_HALSA|ORC1-TYPE DNA replication protein 2|Halobacterium salinarum (strain ATCC

Query: 1 EAGEGDVSVG 10
EAG+ D SVG
Sbjct: 179 EAGKIDCSVG 188


>sp|Y1725_METS5|PUTATIVE HTH-type transcriptional regulatory protein|Metallosphaera sedula

Query: 1 EAGEGDVSV 9
E GE DVS+
Sbjct: 154 ENGESDVSI 162


>sp|CDC64_HALSA|ORC1-TYPE DNA replication protein 4|Halobacterium salinarum (strain ATCC

Query: 1 EAGEGDVSVG 10
EAG+ D SVG
Sbjct: 179 EAGKIDCSVG 188




156|Sequence|776|785|DVSVGIKCDA

>sp|GLYA_CALMQ|SERINE hydroxymethyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 4 VGIKCD 9
VGIKCD
Sbjct: 420 VGIKCD 425


>sp|PSA_PYRAE|PROTEASOME subunit alpha|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 SVGIKCDA 10
+VG+KC A
Sbjct: 38 TVGVKCKA 45


>sp|PELO_METLZ|PROTEIN pelota homolog|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 VSVGIKCD 9
V +G+KC+
Sbjct: 65 VRIGVKCE 72


>sp|PSA_METPE|PROTEASOME subunit alpha|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 SVGIKCD 9
+VGIKC+
Sbjct: 38 AVGIKCN 44


>sp|AROB_SULAC|3-DEHYDROQUINATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 VSVGIKCDA 10
+SVG+ C+A
Sbjct: 258 ISVGMVCEA 266


>sp|AROB_SACS2|3-DEHYDROQUINATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VSVGIKCDA 10
+SVG+ C+A
Sbjct: 258 ISVGMVCEA 266


>sp|PSA_METM6|PROTEASOME subunit alpha|Methanococcus maripaludis (strain C6 /

Query: 3 SVGIKCD 9
+VGIKC+
Sbjct: 39 AVGIKCN 45


>sp|AROB_SULTO|3-DEHYDROQUINATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VSVGIKCDA 10
+SVG+ C+A
Sbjct: 257 ISVGMVCEA 265


>sp|PSA_METS3|PROTEASOME subunit alpha|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 SVGIKC 8
S+GIKC
Sbjct: 38 SIGIKC 43




157|Sequence|781|790|IKCDARVLSE

>sp|SPEH_PYRAR|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 CDARVLSE 10
CDARVL +
Sbjct: 22 CDARVLGD 29


>sp|RRP41_CENSY|EXOSOME complex component Rrp41|Cenarchaeum symbiosum (strain A)

Query: 1 IKCDARVLSE 10
I+CD R +SE
Sbjct: 16 IRCDGRKISE 25


>sp|SPEH_PYRAE|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 CDARVLSE 10
CD+RVL +
Sbjct: 22 CDSRVLRD 29


>sp|DPO42_METMA|DNA polymerase IV 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 CDARVLSE 10
CD ++LSE
Sbjct: 222 CDVQMLSE 229




158|Sequence|786|795|RVLSEDEEDV

>sp|HCP_METJA|HYDROXYLAMINE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VLSEDEEDV 10
VL+ED ED+
Sbjct: 127 VLAEDNEDI 135


>sp|SEPS_METHJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 RVLSEDEED 9
R LSEDEE+
Sbjct: 121 RDLSEDEEE 129


>sp|DNLI_PICTO|DNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 RVLSEDEEDV 10
R++S+DE D+
Sbjct: 378 RIVSDDEHDI 387


>sp|DMD_SACS2|DIPHOSPHOMEVALONATE decarboxylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RVLSEDE 7
R+LSEDE
Sbjct: 62 RILSEDE 68


>sp|MTAP_PYRAB|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrococcus abyssi (strain GE5 /

Query: 1 RVLSEDEEDV 10
RV+ E+EE V
Sbjct: 220 RVMKENEEKV 229


>sp|IF2P_METHJ|PROBABLE translation initiation factor IF-2|Methanospirillum hungatei JF-1

Query: 1 RVLSEDEEDV 10
RV+ ED E+V
Sbjct: 336 RVIGEDPEEV 345


>sp|MTAP_PYRHO|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RVLSEDEEDV 10
RV+ E+EE V
Sbjct: 220 RVMKENEEKV 229


>sp|MTAP_PYRFU|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RVLSEDEEDV 10
RV+ E+EE V
Sbjct: 220 RVMKENEEKV 229




159|Sequence|791|800|DEEDVDFDII

>sp|RS3_METHJ|SMALL ribosomal subunit protein uS3|Methanospirillum hungatei JF-1

Query: 1 DEEDVDFDII 10
DEED+D D I
Sbjct: 217 DEEDLDLDAI 226


>sp|TYW3_ARCFU|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 1 DEEDVDFDII 10
++ VDFDI+
Sbjct: 19 NQRKVDFDIV 28


>sp|COPA_ARCFU|PROBABLE copper-exporting P-type ATPase|Archaeoglobus fulgidus (strain

Query: 1 DEEDVDFDII 10
DE+ +DF+ I
Sbjct: 61 DEKRIDFETI 70


>sp|GCSPB_THEKO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 3 EDVDFDI 9
EDVD DI
Sbjct: 30 EDVDVDI 36


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 DEEDVDFDI 9
DE+DVD I
Sbjct: 354 DEQDVDATI 362


>sp|SYT_METPE|THREONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 DEEDVD 6
DEED+D
Sbjct: 46 DEEDID 51


>sp|FOLD_METTP|BIFUNCTIONAL protein FolD|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 DVDFDII 10
DVDFD +
Sbjct: 235 DVDFDAV 241


>sp|ARGC_METM7|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain C7 /

Query: 3 EDVDFDII 10
ED+D DI+
Sbjct: 66 EDIDTDIV 73


>sp|UPPS_METTH|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Methanothermobacter

Query: 1 DEEDVDFDII 10
D ED+D D+I
Sbjct: 178 DPEDIDEDMI 187


>sp|RS4_METST|SMALL ribosomal subunit protein uS4|Methanosphaera stadtmanae (strain

Query: 1 DEEDVDF 7
DEE++DF
Sbjct: 148 DEENIDF 154




160|Sequence|796|805|DFDIIHNAND

>sp|RL32_SACI7|LARGE ribosomal subunit protein eL32|Saccharolobus islandicus (strain

Query: 4 IIHNAND 10
I+HN ND
Sbjct: 87 IVHNVND 93


>sp|RL32_SACI6|LARGE ribosomal subunit protein eL32|Saccharolobus islandicus (strain

Query: 4 IIHNAND 10
I+HN ND
Sbjct: 87 IVHNVND 93


>sp|RL32_SACI4|LARGE ribosomal subunit protein eL32|Saccharolobus islandicus (strain

Query: 4 IIHNAND 10
I+HN ND
Sbjct: 87 IVHNVND 93


>sp|RL32_SACI3|LARGE ribosomal subunit protein eL32|Saccharolobus islandicus (strain

Query: 4 IIHNAND 10
I+HN ND
Sbjct: 87 IVHNVND 93


>sp|RL32_SACI2|LARGE ribosomal subunit protein eL32|Saccharolobus islandicus (strain

Query: 4 IIHNAND 10
I+HN ND
Sbjct: 87 IVHNVND 93


>sp|RL32_SACI1|LARGE ribosomal subunit protein eL32|Saccharolobus islandicus (strain

Query: 4 IIHNAND 10
I+HN ND
Sbjct: 87 IVHNVND 93


>sp|GCSPA_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 1 DFDIIHN 7
D+DIIH+
Sbjct: 399 DYDIIHS 405


>sp|Y1067_METMP|UNCHARACTERIZED iron-sulfur protein MMP1067|Methanococcus maripaludis (strain DSM

Query: 1 DFDIIHNA 8
+ DI+HNA
Sbjct: 202 EIDIVHNA 209


>sp|RS7_HALSA|SMALL ribosomal subunit protein uS7|Halobacterium salinarum (strain ATCC

Query: 2 FDIIHNAND 10
FDI+H D
Sbjct: 103 FDIVHERTD 111


>sp|RS7_HALS3|SMALL ribosomal subunit protein uS7|Halobacterium salinarum (strain ATCC

Query: 2 FDIIHNAND 10
FDI+H D
Sbjct: 103 FDIVHERTD 111


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1

Query: 1 DFDIIHNAND 10
+F+++ +AND
Sbjct: 215 EFEVMRDAND 224


>sp|CAPPA_METBF|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DFDIIHNA 8
D DI+H A
Sbjct: 464 DLDILHGA 471


>sp|MUTS_HALWD|DNA mismatch repair protein MutS|Haloquadratum walsbyi (strain DSM

Query: 3 DIIHNAND 10
DI+HNA +
Sbjct: 713 DILHNATE 720


>sp|NNR_METJA|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanocaldococcus jannaschii

Query: 2 FDIIHNAND 10
+DII NAN+
Sbjct: 407 YDIIFNANN 415




161|Sequence|801|810|HNANDTFTVK

>sp|AROC_THEVO|CHORISMATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 ANDTFTV 9
AND FTV
Sbjct: 258 ANDPFTV 264




162|Sequence|806|815|TFTVKYVPPA

>sp|TMCA2_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 2|Saccharolobus solfataricus

Query: 2 FTVKYVPP 9
F ++YVPP
Sbjct: 308 FKLEYVPP 315


>sp|KPTA2_ARCFU|PROBABLE RNA 2'-phosphotransferase 2|Archaeoglobus fulgidus (strain ATCC

Query: 2 FTVKYVPP 9
+TV +VPP
Sbjct: 190 YTVDFVPP 197


>sp|KPTA_AERPE|PROBABLE RNA 2'-phosphotransferase|Aeropyrum pernix (strain ATCC 700893

Query: 2 FTVKYVPP 9
+TV +VPP
Sbjct: 198 YTVDWVPP 205


>sp|RL15_PYRHO|LARGE ribosomal subunit protein uL15|Pyrococcus horikoshii (strain ATCC

Query: 1 TFTVKYVP 8
T+T+KY P
Sbjct: 48 TWTIKYAP 55


>sp|RL15_PYRFU|LARGE ribosomal subunit protein uL15|Pyrococcus furiosus (strain ATCC

Query: 1 TFTVKYVP 8
T+T+KY P
Sbjct: 48 TWTIKYAP 55


>sp|RL15_PYRAB|LARGE ribosomal subunit protein uL15|Pyrococcus abyssi (strain GE5 /

Query: 1 TFTVKYVP 8
T+T+KY P
Sbjct: 48 TWTIKYAP 55


>sp|RL15_AERPE|LARGE ribosomal subunit protein uL15|Aeropyrum pernix (strain ATCC

Query: 1 TFTVKYVP 8
T+T+KY P
Sbjct: 47 TWTIKYAP 54


>sp|RL15_THEKO|LARGE ribosomal subunit protein uL15|Thermococcus kodakarensis (strain

Query: 1 TFTVKYVP 8
T+T+KY P
Sbjct: 48 TWTIKYAP 55


>sp|SLAB_METS5|S-LAYER protein B|Metallosphaera sedula (strain ATCC 51363

Query: 1 TFTVKYVPPA 10
T+T+K VPP+
Sbjct: 163 TYTLKVVPPS 172


>sp|TMCA_HALVD|TRNA(MET) cytidine acetyltransferase TmcA|Haloferax volcanii (strain ATCC

Query: 4 VKYVPP 9
V+YVPP
Sbjct: 302 VRYVPP 307


>sp|Y1002_PYRHO|UPF0282 protein PH1002|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 TFTVKYVPP 9
+FT+++ PP
Sbjct: 147 SFTIEFSPP 155


>sp|DNAK_HALMT|CHAPERONE protein DnaK|Haloferax mediterranei (strain ATCC 33500

Query: 2 FTVKYVPPA 10
FT+ +PPA
Sbjct: 431 FTLSGIPPA 439


>sp|Y535_METJA|UNCHARACTERIZED protein MJ0535|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VKYVPPA 10
+KY PPA
Sbjct: 293 LKYAPPA 299


>sp|RS3_HALWD|SMALL ribosomal subunit protein uS3|Haloquadratum walsbyi (strain DSM

Query: 3 TVKYVPPA 10
TVK +PP
Sbjct: 179 TVKIIPPG 186


>sp|RL15_THEPD|LARGE ribosomal subunit protein uL15|Thermofilum pendens (strain DSM

Query: 1 TFTVKYVP 8
++TVKY P
Sbjct: 44 SWTVKYAP 51


>sp|Y276_ARCFU|UPF0284 protein AF_0276|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 VKYVPPA 10
+KY PPA
Sbjct: 47 IKYTPPA 53


>sp|MTRE_METFE|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanothermus fervidus

Query: 1 TFTVKYVPP 9
FTVKY P
Sbjct: 228 NFTVKYGSP 236


>sp|FTR_METJA|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 5 KYVPPA 10
KYVPP+
Sbjct: 58 KYVPPS 63


>sp|Y303_PYRFU|UPF0284 protein PF0303|Pyrococcus furiosus (strain ATCC 43587

Query: 5 KYVPPA 10
KY PPA
Sbjct: 31 KYTPPA 36




163|Sequence|811|820|YVPPAAGRYT

>sp|RS7_METJA|SMALL ribosomal subunit protein uS7|Methanocaldococcus jannaschii

Query: 1 YVPPAAGRYT 10
YVP AGRYT
Sbjct: 34 YVPHTAGRYT 43


>sp|GYRA_HALWD|DNA gyrase subunit A|Haloquadratum walsbyi (strain DSM 16790

Query: 3 PPAAGRYT 10
PPAA RYT
Sbjct: 127 PPAAMRYT 134


>sp|GYRA_HALL2|DNA gyrase subunit A|Haloferax lucentense (strain DSM 14919

Query: 3 PPAAGRYT 10
PPAA RYT
Sbjct: 127 PPAAMRYT 134


>sp|Y581_THEON|UPF0127 protein TON_0581|Thermococcus onnurineus (strain NA1)

Query: 1 YVPPAAGRY 9
YVP A RY
Sbjct: 84 YVPKKAARY 92


>sp|HUTI_PYRAR|IMIDAZOLONEPROPIONASE arsenaticum (strain DSM 13514

Query: 1 YVPPAAGR 8
++PP AGR
Sbjct: 174 HIPPPAGR 181


>sp|Y1154_METLZ|UPF0173 metal-dependent hydrolase Mlab_1154|Methanocorpusculum labreanum

Query: 4 PAAGRYT 10
PA GRYT
Sbjct: 153 PAGGRYT 159


>sp|Y1242_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 2 VPPAAGRY 9
+PP+ G+Y
Sbjct: 342 LPPSKGKY 349


>sp|Y1112_PYRHO|UPF0127 protein PH1112|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YVPPAAGRY 9
Y+P A RY
Sbjct: 83 YIPKARARY 91


>sp|CAS8A_METJA|CRISPR-ASSOCIATED protein Cas8a2/Csa4|Methanocaldococcus jannaschii (strain ATCC

Query: 4 PAAGRY 9
PAAG+Y
Sbjct: 161 PAAGKY 166


>sp|RADB_HALSA|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 1 YVPPAAGR 8
Y PPAAG+
Sbjct: 32 YGPPAAGK 39


>sp|RADB_HALS3|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 1 YVPPAAGR 8
Y PPAAG+
Sbjct: 32 YGPPAAGK 39


>sp|DNLI1_KORCO|DNA ligase 1|Korarchaeum cryptofilum (strain OPF8)

Query: 1 YVPPAAGRY 9
Y+P GRY
Sbjct: 393 YIPGVRGRY 401


>sp|CS1F2_THETK|CRISPR-ASSOCIATED endonuclease Cas1/endonuclease Cas2 fusion|Thermoproteus tenax

Query: 2 VPPAAGRYT 10
VPP AGR +
Sbjct: 140 VPPGAGRRS 148


>sp|MALA_HALJT|ALPHA-AMYLASE MalA|Haloarcula japonica (strain ATCC 49778

Query: 1 YVPPAAGRY 9
+VP A GRY
Sbjct: 52 FVPDAPGRY 60


>sp|Y1962_ARCFU|UNCHARACTERIZED protein AF_1962|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YVPPAAG 7
Y+PPA G
Sbjct: 52 YLPPAVG 58


>sp|RL14E_IGNH4|LARGE ribosomal subunit protein eL14|Ignicoccus hospitalis (strain KIN4/I

Query: 2 VPPAAGRY 9
VPP+ G Y
Sbjct: 95 VPPSLGAY 102


>sp|RL22_METBU|LARGE ribosomal subunit protein uL22|Methanococcoides burtonii (strain

Query: 3 PPAAGRY 9
P AAGRY
Sbjct: 74 PMAAGRY 80


>sp|SYC_AERPE|CYSTEINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 YVPPAAGRY 9
Y PP G Y
Sbjct: 18 YSPPLVGMY 26




164|Sequence|816|825|AGRYTIKVLF

>sp|RTCA_PYRAE|RNA 3'-terminal phosphate cyclase|Pyrobaculum aerophilum (strain ATCC

Query: 1 AGRYTIKV 8
AGRYTI+V
Sbjct: 334 AGRYTIEV 341


>sp|NNR_THEPD|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Thermofilum pendens (strain DSM

Query: 3 RYTIKVL 9
RYTIKVL
Sbjct: 517 RYTIKVL 523


>sp|RL22_METBU|LARGE ribosomal subunit protein uL22|Methanococcoides burtonii (strain

Query: 1 AGRYTIKV 8
AGRY +KV
Sbjct: 77 AGRYPVKV 84


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 AGRYTIKV 8
AGRY +KV
Sbjct: 879 AGRYLLKV 886


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 AGRYTIKV 8
AGRY +KV
Sbjct: 888 AGRYLLKV 895


>sp|SYY_SULTO|TYROSINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 AGRYTIKVL 9
AG+Y I+VL
Sbjct: 96 AGQYAIEVL 104


>sp|HARB_PYRHO|ARCHAEAL histone B|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 AGRYTIKV 8
AGR T+KV
Sbjct: 51 AGRKTVKV 58


>sp|HARB_PYRFU|ARCHAEAL histone B|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AGRYTIKV 8
AGR T+KV
Sbjct: 51 AGRKTVKV 58


>sp|HARB_PYRAB|ARCHAEAL histone B|Pyrococcus abyssi (strain GE5 /

Query: 1 AGRYTIKV 8
AGR T+KV
Sbjct: 51 AGRKTVKV 58


>sp|NOP10_THEKO|RIBOSOME biogenesis protein Nop10|Thermococcus kodakarensis (strain ATCC

Query: 2 GRYTIK 7
GRYT+K
Sbjct: 12 GRYTLK 17


>sp|DHQS_METBF|3-DEHYDROQUINATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 RYTIKVLF 10
RY +K++F
Sbjct: 148 RYDVKIIF 155


>sp|HARA_PYRFU|ARCHAEAL histone A|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AGRYTIKV 8
AGR T+KV
Sbjct: 51 AGRKTVKV 58


>sp|HARA_PYRAB|ARCHAEAL histone A|Pyrococcus abyssi (strain GE5 /

Query: 1 AGRYTIKV 8
AGR T+KV
Sbjct: 51 AGRKTVKV 58


>sp|HARA_PYRHO|ARCHAEAL histone A|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 AGRYTIKV 8
AGR T+KV
Sbjct: 51 AGRKTVKV 58


>sp|HAF1_ARCFU|PROBABLE archaeal histone A1-1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AGRYTIKV 8
AGR T+KV
Sbjct: 55 AGRKTVKV 62


>sp|Y1363_THEAC|PUTATIVE HTH-type transcriptional regulatory protein|Thermoplasma

Query: 3 RYTIKVLF 10
RY +KVL+
Sbjct: 44 RYVLKVLY 51


>sp|Y1583_METJA|PROBABLE S-adenosyl-L-methionine-binding protein MJ1583|Methanocaldococcus

Query: 2 GRYTIKV 8
G+YT+K+
Sbjct: 84 GKYTVKI 90


>sp|NOP10_METM5|RIBOSOME biogenesis protein Nop10|Methanococcus maripaludis (strain C5 /

Query: 2 GRYTIK 7
GRYT+K
Sbjct: 10 GRYTLK 15


>sp|NOP10_THEGJ|RIBOSOME biogenesis protein Nop10|Thermococcus gammatolerans (strain DSM

Query: 2 GRYTIK 7
GRYT+K
Sbjct: 12 GRYTLK 17


>sp|NOP10_PYRFU|RIBOSOME biogenesis protein Nop10|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GRYTIK 7
GRYT+K
Sbjct: 12 GRYTLK 17


>sp|NOP10_PYRAB|RIBOSOME biogenesis protein Nop10|Pyrococcus abyssi (strain GE5 /

Query: 2 GRYTIK 7
GRYT+K
Sbjct: 12 GRYTLK 17


>sp|NOP10_THEON|RIBOSOME biogenesis protein Nop10|Thermococcus onnurineus (strain NA1)

Query: 2 GRYTIK 7
GRYT+K
Sbjct: 12 GRYTLK 17




165|Sequence|821|830|IKVLFASQEI

>sp|HELS_PYRAB|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus abyssi (strain GE5 /

Query: 2 KVLFASQEI 10
KVL ASQE+
Sbjct: 613 KVLEASQEV 621




166|Sequence|826|835|ASQEIPASPF

>sp|MRE11_METAC|DNA double-strand break repair protein|Methanosarcina acetivorans

Query: 4 EIPASPF 10
EIPASP
Sbjct: 390 EIPASPI 396


>sp|SYT_METMJ|THREONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 ASQEIPASP 9
A+QE+P+ P
Sbjct: 479 AAQEVPSFP 487




167|Sequence|831|840|PASPFRVKVD

>sp|TSGDD_HALVD|GLUCOSE import ATP-binding protein TsgD13|Haloferax volcanii (strain ATCC

Query: 1 PASPFRVKVD 10
PA+PFR D
Sbjct: 109 PATPFRPDAD 118


>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PASPFRVK 8
P SP+RV+
Sbjct: 424 PYSPYRVR 431




168|Sequence|836|845|RVKVDPSHDA

>sp|SYE_THEPD|GLUTAMATE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 RVKVDPSH 8
R+K DP+H
Sbjct: 246 RIKTDPAH 253


>sp|Y746_METJA|UNCHARACTERIZED protein MJ0746|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VDPSHD 9
+DP+HD
Sbjct: 111 IDPAHD 116


>sp|AMPPA_HYPBU|AMP phosphorylase|Hyperthermus butylicus (strain DSM 5456

Query: 4 VDPSHDA 10
+DP HDA
Sbjct: 13 IDPGHDA 19


>sp|SYE_HYPBU|GLUTAMATE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 RVKVDPSH 8
RVK DP H
Sbjct: 236 RVKTDPRH 243


>sp|COFC_METIM|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanocaldococcus infernus (strain DSM 11812

Query: 2 VKVDPSHDA 10
+KV+P H +
Sbjct: 199 IKVEPKHSS 207


>sp|HMGCS_SULTO|HYDROXYMETHYLGLUTARYL-COA synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 RVKVDPS 7
R K+DPS
Sbjct: 64 RAKIDPS 70


>sp|RL15E_SACS2|LARGE ribosomal subunit protein eL15|Saccharolobus solfataricus (strain

Query: 2 VKVDPSH 8
V VDPSH
Sbjct: 131 VMVDPSH 137


>sp|SYE_AERPE|GLUTAMATE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 RVKVDPSH 8
R+K DP H
Sbjct: 245 RMKTDPRH 252


>sp|Y2262_NATPD|PUTATIVE heme-binding protein NP_2262A|Natronomonas pharaonis (strain ATCC

Query: 1 RVKVDPSHD 9
R DPSHD
Sbjct: 281 RPSTDPSHD 289


>sp|APGM2_METTH|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanothermobacter thermautotrophicus

Query: 2 VKVDPSHD 9
V+V+P HD
Sbjct: 158 VRVEPPHD 165


>sp|TOP3_SACS2|DNA topoisomerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VKVDPSHDA 10
+K DP+H A
Sbjct: 365 IKDDPAHPA 373


>sp|RL15E_SACI7|LARGE ribosomal subunit protein eL15|Saccharolobus islandicus (strain

Query: 2 VKVDPSH 8
+ VDPSH
Sbjct: 131 IMVDPSH 137


>sp|RL15E_SACI6|LARGE ribosomal subunit protein eL15|Saccharolobus islandicus (strain

Query: 2 VKVDPSH 8
+ VDPSH
Sbjct: 131 IMVDPSH 137


>sp|RL15E_SACI4|LARGE ribosomal subunit protein eL15|Saccharolobus islandicus (strain

Query: 2 VKVDPSH 8
+ VDPSH
Sbjct: 131 IMVDPSH 137


>sp|RL15E_SACI3|LARGE ribosomal subunit protein eL15|Saccharolobus islandicus (strain

Query: 2 VKVDPSH 8
+ VDPSH
Sbjct: 131 IMVDPSH 137


>sp|RL15E_SACI2|LARGE ribosomal subunit protein eL15|Saccharolobus islandicus (strain

Query: 2 VKVDPSH 8
+ VDPSH
Sbjct: 131 IMVDPSH 137


>sp|RL15E_SACI1|LARGE ribosomal subunit protein eL15|Saccharolobus islandicus (strain

Query: 2 VKVDPSH 8
+ VDPSH
Sbjct: 131 IMVDPSH 137


>sp|PMDHS_METKA|PHOSPHOMEVALONATE dehydratase small subunit|Methanopyrus kandleri (strain AV19 /

Query: 4 VDPSHD 9
VDPSH+
Sbjct: 43 VDPSHE 48


>sp|RPO5_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo5|Sulfurisphaera tokodaii (strain DSM

Query: 1 RVKVDPSH 8
++K+DPS
Sbjct: 6 KIKIDPSQ 13




169|Sequence|841|850|PSHDASKVKA

>sp|SYFB_METJA|PHENYLALANINE--TRNA ligase beta subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 3 HDASKVK 9
HDA KVK
Sbjct: 142 HDADKVK 148


>sp|SYFB_KORCO|PHENYLALANINE--TRNA ligase beta subunit|Korarchaeum cryptofilum (strain OPF8)

Query: 3 HDASKVK 9
HD SKVK
Sbjct: 139 HDFSKVK 145


>sp|PURT_METMP|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 3 HDASKVK 9
H+ASKVK
Sbjct: 337 HEASKVK 343


>sp|ATGT_KORCO|TRNA-GUANINE(15) transglycosylase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 SHDASKVKA 10
SHD +VKA
Sbjct: 285 SHDPKEVKA 293




170|Sequence|846|855|SKVKAEGPGL

>sp|SECG_METTP|PREPROTEIN translocase subunit SecG|Methanothrix thermoacetophila (strain

Query: 1 SKVKAEGPGL 10
+K K EGPGL
Sbjct: 2 AKKKGEGPGL 11


>sp|IF2P_METMJ|PROBABLE translation initiation factor IF-2|Methanoculleus marisnigri

Query: 2 KVKAEGPG 9
KV A+GPG
Sbjct: 226 KVSADGPG 233


>sp|GATA_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Archaeoglobus fulgidus (strain ATCC

Query: 1 SKVKAEGPG 9
SKV+AEG G
Sbjct: 322 SKVRAEGFG 330


>sp|RPO3_THEKO|DNA-DIRECTED RNA polymerase subunit Rpo3|Thermococcus kodakarensis (strain

Query: 3 VKAEGPGL 10
++AEGPG+
Sbjct: 91 LEAEGPGM 98


>sp|TAL_NITMS|PROBABLE transaldolase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 KVKAEGPGL 10
KVKAE P +
Sbjct: 212 KVKAENPDI 220


>sp|RPO3_PYRHO|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrococcus horikoshii (strain ATCC

Query: 3 VKAEGPGL 10
++AEGPG+
Sbjct: 91 LEAEGPGI 98


>sp|RPO3_PYRFU|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VKAEGPGL 10
++AEGPG+
Sbjct: 93 LEAEGPGI 100


>sp|IF2P_METKA|PROBABLE translation initiation factor IF-2|Methanopyrus kandleri (strain

Query: 2 KVKAEGPG 9
K++ EGPG
Sbjct: 230 KIEVEGPG 237


>sp|RPO3_PYRAB|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrococcus abyssi (strain GE5 /

Query: 3 VKAEGPGL 10
++AEGPG+
Sbjct: 91 LEAEGPGI 98


>sp|RL6_IGNH4|LARGE ribosomal subunit protein uL6|Ignicoccus hospitalis (strain

Query: 1 SKVKAEGP 8
SKVK GP
Sbjct: 24 SKVKVRGP 31




171|Sequence|851|860|EGPGLSKAGV

>sp|ILVC_METMP|KETOL-ACID reductoisomerase (NADP(+))|Methanococcus maripaludis (strain DSM

Query: 1 EGPGLSKAGV 10
+G GLS+AGV
Sbjct: 169 KGIGLSRAGV 178


>sp|ILVC_METM5|KETOL-ACID reductoisomerase (NADP(+))|Methanococcus maripaludis (strain C5 /

Query: 1 EGPGLSKAGV 10
+G GLS+AGV
Sbjct: 169 KGIGLSRAGV 178


>sp|ILVC_METVS|KETOL-ACID reductoisomerase (NADP(+))|Methanococcus vannielii (strain ATCC

Query: 1 EGPGLSKAGV 10
+G GLS+AGV
Sbjct: 169 KGIGLSRAGV 178


>sp|ILVC_METM7|KETOL-ACID reductoisomerase (NADP(+))|Methanococcus maripaludis (strain C7 /

Query: 1 EGPGLSKAGV 10
+G GLS+AGV
Sbjct: 169 KGIGLSRAGV 178


>sp|ILVC_METM6|KETOL-ACID reductoisomerase (NADP(+))|Methanococcus maripaludis (strain C6 /

Query: 1 EGPGLSKAGV 10
+G GLS+AGV
Sbjct: 169 KGIGLSRAGV 178


>sp|APEH_AERPE|ACYLAMINO-ACID-RELEASING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 3 PGLSKAGV 10
PGL KAGV
Sbjct: 459 PGLFKAGV 466


>sp|GLMU_META3|BIFUNCTIONAL protein GlmU|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 EGPGLSKAG 9
EGP + K+G
Sbjct: 260 EGPAIIKSG 268




172|Sequence|856|865|SKAGVENGKP

>sp|Y1477_METJA|UNCHARACTERIZED protein MJ1477|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SKAGVENGK 9
SK G ENGK
Sbjct: 96 SKDGTENGK 104


>sp|CMR5_SACS2|CRISPR system CMR subunit Cmr5|Saccharolobus solfataricus (strain ATCC

Query: 1 SKAGVEN 7
SKAG+EN
Sbjct: 57 SKAGLEN 63


>sp|PSA2_HALMA|PROTEASOME subunit alpha 2|Haloarcula marismortui (strain ATCC 43049

Query: 3 AGVENGKP 10
AG+E+G+P
Sbjct: 140 AGIEDGEP 147


>sp|RPO2C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanocaldococcus jannaschii

Query: 5 VENGKP 10
VENGKP
Sbjct: 71 VENGKP 76


>sp|PSA1_HALVD|PROTEASOME subunit alpha 1|Haloferax volcanii (strain ATCC 29605

Query: 3 AGVENGKP 10
GVENG P
Sbjct: 141 GGVENGTP 148


>sp|DPCKG_THEVO|GTP-DEPENDENT dephospho-CoA kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 KAGVENGKP 10
K+ +EN KP
Sbjct: 100 KSSIENNKP 108


>sp|PSB2_METS5|PROTEASOME subunit beta 2|Metallosphaera sedula (strain ATCC 51363

Query: 3 AGVENGKP 10
GV+NG+P
Sbjct: 106 GGVDNGEP 113


>sp|CCA_METMA|CCA-ADDING enzyme|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KAGVENGKP 10
K GV +GKP
Sbjct: 333 KTGVWSGKP 341


>sp|CCA_METAC|CCA-ADDING enzyme|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 KAGVENGKP 10
K GV +GKP
Sbjct: 333 KTGVWSGKP 341


>sp|CDPAS_AERPE|CDP-ARCHAEOL synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 KAGVENGKP 10
+ G+E G+P
Sbjct: 109 RLGIERGRP 117


>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 5 VENGKP 10
VENG+P
Sbjct: 583 VENGRP 588


>sp|DNLI_METVS|DNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 5 VENGKP 10
+ENGKP
Sbjct: 307 LENGKP 312


>sp|PSA_HALSA|PROTEASOME subunit alpha|Halobacterium salinarum (strain ATCC 700922

Query: 3 AGVENGKP 10
AGVE G+P
Sbjct: 141 AGVEGGEP 148


>sp|PSA_HALS3|PROTEASOME subunit alpha|Halobacterium salinarum (strain ATCC 29341

Query: 3 AGVENGKP 10
AGVE G+P
Sbjct: 141 AGVEGGEP 148


>sp|THIM1_METST|HYDROXYETHYLTHIAZOLE kinase 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 SKAGVENGKP 10
+K +EN KP
Sbjct: 84 AKFAIENNKP 93




173|Sequence|861|870|ENGKPTHFTV

>sp|SYA_HYPBU|ALANINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 3 GKPTHFTV 10
GKP+H T+
Sbjct: 884 GKPSHITL 891


>sp|DNLI2_METAC|DNA ligase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ENGKPTHF 8
ENGKP F
Sbjct: 312 ENGKPRAF 319


>sp|Y1463_METJA|UPF0128 protein MJ1463|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NGKPTHFTV 10
+GK T+FTV
Sbjct: 46 DGKETYFTV 54


>sp|GGGPS_METS5|GERANYLGERANYLGLYCERYL phosphate synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 ENGKPTHFTV 10
+ G+P HF++
Sbjct: 16 DEGQPIHFSL 25


>sp|QUEC_PYRHO|7-CYANO-7-DEAZAGUANINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ENGKPTH 7
E+GKP H
Sbjct: 202 EDGKPIH 208


>sp|HIS6_PYRFU|IMIDAZOLE glycerol phosphate synthase subunit|Pyrococcus furiosus (strain

Query: 3 GKPTHF 8
GKP HF
Sbjct: 205 GKPEHF 210


>sp|HIS6_METS5|IMIDAZOLE glycerol phosphate synthase subunit|Metallosphaera sedula (strain

Query: 3 GKPTHF 8
GKP HF
Sbjct: 205 GKPDHF 210


>sp|DNLI_METVS|DNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 ENGKPTHF 8
ENGKP F
Sbjct: 308 ENGKPRPF 315


>sp|QUEC_PYRAB|7-CYANO-7-DEAZAGUANINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 ENGKPTH 7
E+GKP H
Sbjct: 202 EDGKPIH 208


>sp|SYT_METM6|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 ENGKPTH 7
ENG+P H
Sbjct: 194 ENGEPPH 200


>sp|GLPK_HALMA|GLYCEROL kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 ENGKPTH 7
E GKP H
Sbjct: 92 ETGKPVH 98


>sp|NRPR_METJA|GLOBAL nitrogen regulator NrpR|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ENGKPTHF 8
E+GKP F
Sbjct: 180 EDGKPVEF 187


>sp|SYT_METVS|THREONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 ENGKPTH 7
ENG+P H
Sbjct: 194 ENGEPPH 200


>sp|QUEC_THEKO|7-CYANO-7-DEAZAGUANINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ENGKPTH 7
E+GKP H
Sbjct: 202 EDGKPIH 208


>sp|DPCKG_THEVO|GTP-DEPENDENT dephospho-CoA kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 ENGKPTHFTV 10
EN KPT V
Sbjct: 104 ENNKPTRIEV 113


>sp|Y810_PYRAR|UPF0173 metal-dependent hydrolase Pars_0810|Pyrobaculum arsenaticum

Query: 2 NGKPTHFTV 10
N KPTH +
Sbjct: 40 NAKPTHILI 48


>sp|PCKG_PYRFU|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus furiosus (strain ATCC 43587

Query: 2 NGKPTHFT 9
NG+ T+FT
Sbjct: 260 NGRKTYFT 267


>sp|GGGPS_SULAC|GERANYLGERANYLGLYCERYL phosphate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ENGKPTHFTV 10
E GK HF++
Sbjct: 16 EEGKTLHFSL 25


>sp|AROA_PYRAB|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 3 GKPTHFTV 10
GKP FTV
Sbjct: 354 GKPRGFTV 361


>sp|PUR7_METJA|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ENGKPTHF 8
ENG TH+
Sbjct: 69 ENGVKTHY 76


>sp|BIOW_METIM|6-CARBOXYHEXANOATE--COA ligase|Methanocaldococcus infernus (strain DSM 11812

Query: 1 ENGKPTHFTV 10
ENGKP +
Sbjct: 37 ENGKPDFINI 46


>sp|PCKG_PYRHO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 NGKPTHFT 9
NG+ T+FT
Sbjct: 255 NGRKTYFT 262


>sp|PCKG_PYRAB|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus abyssi (strain GE5 /

Query: 2 NGKPTHFT 9
NG+ T+FT
Sbjct: 255 NGRKTYFT 262


>sp|ATGT_KORCO|TRNA-GUANINE(15) transglycosylase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 GKPTHF 8
GKP HF
Sbjct: 222 GKPFHF 227


>sp|PCKG_THESM|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus sibiricus (strain DSM 12597

Query: 2 NGKPTHFT 9
NG+ T+FT
Sbjct: 258 NGRKTYFT 265


>sp|GGGPS_STAMF|GERANYLGERANYLGLYCERYL phosphate synthase|Staphylothermus marinus (strain ATCC 43588

Query: 2 NGKPTHFTV 10
NG+ HFT+
Sbjct: 14 NGEKLHFTL 22


>sp|GGGPS_PYRAB|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 ENGKPTHFTV 10
E+GK HF +
Sbjct: 16 ESGKKLHFVL 25




174|Sequence|866|875|THFTVYTKGA

>sp|ENDA_PYRFU|TRNA-SPLICING endonuclease|Pyrococcus furiosus (strain ATCC 43587

Query: 1 THFTVYTKGA 10
+H+ VY KGA
Sbjct: 105 SHYRVYRKGA 114


>sp|GLNA_SULAC|GLUTAMINE synthetase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 THFTVYTK 8
THF+++TK
Sbjct: 270 THFSLWTK 277


>sp|PC2DH_METJA|PUTATIVE precorrin-2 dehydrogenase|Methanocaldococcus jannaschii (strain

Query: 3 FTVYTKG 9
F++YTKG
Sbjct: 129 FSIYTKG 135


>sp|ENDA_PYRAB|TRNA-SPLICING endonuclease|Pyrococcus abyssi (strain GE5 /

Query: 1 THFTVYTKGA 10
+HF VY K A
Sbjct: 105 SHFRVYRKNA 114


>sp|ENDA_METMA|TRNA-SPLICING endonuclease|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 THFTVYTK 8
THF VY K
Sbjct: 284 THFRVYRK 291


>sp|ENDA_METAC|TRNA-SPLICING endonuclease|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 THFTVYTK 8
THF VY K
Sbjct: 281 THFRVYRK 288


>sp|SLAA_SULAC|S-LAYER protein A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 THFTVYTKGA 10
T F VYT G+
Sbjct: 1210 TSFAVYTNGS 1219


>sp|Y238_METTH|UNCHARACTERIZED protein MTH_238|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 TVYTKGA 10
T+Y KGA
Sbjct: 119 TIYVKGA 125




175|Sequence|871|880|YTKGAGKAPL

>sp|SYP_METAR|PROLINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 KGAGKAPL 10
KGAGK P+
Sbjct: 452 KGAGKCPI 459


>sp|FLAG_METVO|PUTATIVE flagella-related protein G|Methanococcus voltae

Query: 1 YTKGAGKAPL 10
Y K GK+P+
Sbjct: 72 YLKNTGKSPI 81


>sp|RS4_METKA|SMALL ribosomal subunit protein uS4|Methanopyrus kandleri (strain AV19 /

Query: 1 YTKGAGKAPL 10
Y KG K PL
Sbjct: 113 YRKGLAKTPL 122


>sp|AROA_METAR|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 2 TKGAGKAPL 10
T+G G APL
Sbjct: 137 TRGTGTAPL 145


>sp|AROA_HALLT|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Halorubrum lacusprofundi (strain ATCC

Query: 2 TKGAGKAPL 10
T+G G+APL
Sbjct: 144 TRGNGQAPL 152


>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KGAGKAPL 10
KG GK P+
Sbjct: 61 KGTGKVPV 68




176|Sequence|876|885|GKAPLNVQFN

>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 2 KAPLNVQF 9
K PLNVQF
Sbjct: 803 KGPLNVQF 810


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 2 KAPLNVQF 9
K P NVQF
Sbjct: 817 KGPFNVQF 824


>sp|CARB_SULAC|CARBAMOYL phosphate synthase large chain|Sulfolobus acidocaldarius (strain

Query: 2 KAPLNVQF 9
K P NVQF
Sbjct: 817 KGPFNVQF 824


>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC

Query: 2 KAPLNVQF 9
K P NVQF
Sbjct: 803 KGPFNVQF 810


>sp|CARB_SACI6|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 KAPLNVQF 9
K P NVQF
Sbjct: 816 KGPFNVQF 823


>sp|CARB_SACI4|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 KAPLNVQF 9
K P NVQF
Sbjct: 816 KGPFNVQF 823


>sp|CARB_SACI3|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 KAPLNVQF 9
K P NVQF
Sbjct: 816 KGPFNVQF 823


>sp|CARB_SACI1|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 KAPLNVQF 9
K P NVQF
Sbjct: 816 KGPFNVQF 823


>sp|CARB_SACI7|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 KAPLNVQF 9
K P NVQF
Sbjct: 816 KGPFNVQF 823


>sp|CARB_SACI2|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 2 KAPLNVQF 9
K P NVQF
Sbjct: 816 KGPFNVQF 823


>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 2 KAPLNVQF 9
K P NVQF
Sbjct: 816 KGPFNVQF 823


>sp|GCH3_SACS2|GTP cyclohydrolase III|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GKAPLNVQFN 10
GK PL Q+N
Sbjct: 90 GKTPLEAQWN 99


>sp|GCH3_SACI7|GTP cyclohydrolase III|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 GKAPLNVQFN 10
GK PL Q+N
Sbjct: 90 GKTPLEAQWN 99


>sp|GCH3_SACI2|GTP cyclohydrolase III|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 GKAPLNVQFN 10
GK PL Q+N
Sbjct: 90 GKTPLEAQWN 99


>sp|GCH3_SACI1|GTP cyclohydrolase III|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 GKAPLNVQFN 10
GK PL Q+N
Sbjct: 90 GKTPLEAQWN 99


>sp|GCH3_SACI3|GTP cyclohydrolase III|Saccharolobus islandicus (strain M.16.27)

Query: 1 GKAPLNVQFN 10
GK PL Q+N
Sbjct: 90 GKTPLEAQWN 99


>sp|GCH3_SACI6|GTP cyclohydrolase III|Saccharolobus islandicus (strain M.16.4 /

Query: 1 GKAPLNVQFN 10
GK PL Q+N
Sbjct: 90 GKTPLEAQWN 99


>sp|GCH3_SACI4|GTP cyclohydrolase III|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GKAPLNVQFN 10
GK PL Q+N
Sbjct: 90 GKTPLEAQWN 99


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 2 KAPLNVQF 9
K P N+QF
Sbjct: 824 KGPFNIQF 831


>sp|DHOM_SULTO|HOMOSERINE dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 KAPLNVQFN 10
KAPL + FN
Sbjct: 102 KAPLALAFN 110




177|Sequence|881|890|NVQFNSPLPG

>sp|RL35A_AERPE|LARGE ribosomal subunit protein eL33|Aeropyrum pernix (strain ATCC

Query: 2 VQFNSPLPG 10
V+FN PLPG
Sbjct: 70 VKFNPPLPG 78


>sp|GATE_THESM|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermococcus sibiricus (strain DSM 12597

Query: 1 NVQFNSPLPG 10
N Q+ PLPG
Sbjct: 416 NTQYMRPLPG 425


>sp|GATE_THEKO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermococcus kodakarensis (strain ATCC

Query: 1 NVQFNSPLPG 10
N Q+ PLPG
Sbjct: 416 NTQYMRPLPG 425


>sp|GATE_THEGJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermococcus gammatolerans (strain DSM

Query: 1 NVQFNSPLPG 10
N Q+ PLPG
Sbjct: 416 NTQYMRPLPG 425


>sp|GATE_PYRFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NVQFNSPLPG 10
N Q+ PLPG
Sbjct: 415 NTQYMRPLPG 424


>sp|AATB_METKA|A-TYPE ATP synthase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 2 VQFNSPLPG 10
V+F+SP PG
Sbjct: 477 VKFSSPRPG 485


>sp|TKSP_THEKO|SUBTILISIN-LIKE serine protease|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 NVQFNSPLPG 10
+V++N+P PG
Sbjct: 628 HVEYNNPAPG 637


>sp|GLNB4_METBA|NITROGEN fixation nifHD2 region GlnB-like|Methanosarcina barkeri

Query: 3 QFNSPLP 9
+FN PLP
Sbjct: 45 EFNPPLP 51


>sp|RL18_HALMA|LARGE ribosomal subunit protein uL18|Haloarcula marismortui (strain ATCC

Query: 1 NVQFNSPLPG 10
++ NSP PG
Sbjct: 104 DIGLNSPTPG 113


>sp|RTCA_SULAC|RNA 3'-terminal phosphate cyclase|Sulfolobus acidocaldarius (strain

Query: 1 NVQFNSPLPG 10
N++ N P PG
Sbjct: 34 NIRANRPKPG 43


>sp|RTCA_ARCFU|RNA 3'-terminal phosphate cyclase|Archaeoglobus fulgidus (strain ATCC

Query: 1 NVQFNSPLPG 10
N++ N P PG
Sbjct: 34 NIRANRPKPG 43


>sp|RTCA_METTP|RNA 3'-terminal phosphate cyclase|Methanothrix thermoacetophila

Query: 1 NVQFNSPLPG 10
N++ N P PG
Sbjct: 34 NIRRNRPRPG 43


>sp|Y690_METJA|UNCHARACTERIZED protein MJ0690|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NVQFNSPLPG 10
N+Q+ +PL G
Sbjct: 128 NIQYITPLMG 137


>sp|RTCA_METKA|RNA 3'-terminal phosphate cyclase|Methanopyrus kandleri (strain AV19

Query: 1 NVQFNSPLPG 10
N++ N P PG
Sbjct: 36 NIRANRPRPG 45


>sp|RTCA_METBF|RNA 3'-terminal phosphate cyclase|Methanosarcina barkeri (strain

Query: 1 NVQFNSPLPG 10
N++ N P PG
Sbjct: 34 NIRKNRPSPG 43


>sp|TMPS_METJA|THYMIDYLATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NVQFNSPLP 9
N++F +P P
Sbjct: 142 NIEFENPKP 150


>sp|Y793_METJA|UNCHARACTERIZED protein MJ0793|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NVQFNSP 7
N+QFN P
Sbjct: 40 NIQFNFP 46




178|Sequence|886|895|SPLPGDAVKD

>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PLPGDAVKD 10
P PGD KD
Sbjct: 752 PRPGDLTKD 760


>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PLPGDAVKD 10
P PGD KD
Sbjct: 379 PRPGDLTKD 387


>sp|CAS2_AERPE|CRISPR-ASSOCIATED endoribonuclease Cas2|Aeropyrum pernix (strain ATCC 700893

Query: 3 LPGDAVKD 10
+PGD+V+D
Sbjct: 68 IPGDSVRD 75


>sp|RUBPP_HALXS|RIBULOSE-1,5-BISPHOSPHATE 5-phosphatase|Halopiger xanaduensis (strain DSM 18323

Query: 1 SPLPGDAV 8
SP PGDA+
Sbjct: 81 SPRPGDAL 88


>sp|MPTA_METB6|GTP cyclohydrolase MptA|Methanoregula boonei (strain DSM 21154

Query: 3 LPGDAV 8
LPGDAV
Sbjct: 282 LPGDAV 287


>sp|NPD1_PYRAE|NAD-DEPENDENT protein deacetylase 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 SPLPGDAVKD 10
PLP DA+++
Sbjct: 170 EPLPQDALRE 179


>sp|HTR2_HALMA|SENSORY rhodopsin II transducer|Haloarcula marismortui (strain ATCC 43049

Query: 1 SPLPGD 6
SP+PGD
Sbjct: 177 SPVPGD 182


>sp|Y738_METVS|UPF0210 protein Mevan_0738|Methanococcus vannielii (strain ATCC 35089

Query: 1 SPLPGDAVKD 10
+P PGD++ +
Sbjct: 285 TPAPGDSIAN 294


>sp|GATD_HALWD|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Haloquadratum walsbyi (strain DSM

Query: 1 SPLPGDAVK 9
SP PGD V+
Sbjct: 2 SPHPGDRVR 10


>sp|NASD_HALMT|ASSIMILATORY ferredoxin-dependent nitrite reductase|Haloferax mediterranei

Query: 1 SPLPGDAVKD 10
S L GDAV+D
Sbjct: 10 SDLYGDAVRD 19


>sp|Y1412_META3|UPF0210 protein Maeo_1412|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 SPLPGDAVKD 10
+P PGD++ +
Sbjct: 285 TPAPGDSIAN 294


>sp|CBIA_HALMA|COBYRINATE a,c-diamide synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 SPLPGDAVKD 10
SP+ GD+V D
Sbjct: 267 SPVAGDSVPD 276




179|Sequence|891|900|DAVKDLDIID

>sp|ILVC_SACS2|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus solfataricus (strain

Query: 1 DAVKDLDII 9
DAVKD DII
Sbjct: 72 DAVKDADII 80


>sp|ILVC_SACI7|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 1 DAVKDLDII 9
DAVKD DII
Sbjct: 72 DAVKDADII 80


>sp|ILVC_SACI2|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 1 DAVKDLDII 9
DAVKD DII
Sbjct: 72 DAVKDADII 80


>sp|ILVC_SACI6|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 1 DAVKDLDII 9
DAVKD DII
Sbjct: 72 DAVKDADII 80


>sp|ILVC_SACI4|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 1 DAVKDLDII 9
DAVKD DII
Sbjct: 72 DAVKDADII 80


>sp|ILVC_SACI3|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 1 DAVKDLDII 9
DAVKD DII
Sbjct: 72 DAVKDADII 80


>sp|ILVC_SACI1|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 1 DAVKDLDII 9
DAVKD DII
Sbjct: 72 DAVKDADII 80


>sp|ILVC_METS5|KETOL-ACID reductoisomerase (NAD(P)(+))|Metallosphaera sedula (strain ATCC

Query: 1 DAVKDLDII 9
DAVKD D++
Sbjct: 72 DAVKDADVV 80


>sp|RL32_THESM|LARGE ribosomal subunit protein eL32|Thermococcus sibiricus (strain DSM

Query: 3 VKDLDIID 10
VKDL++ID
Sbjct: 85 VKDLELID 92


>sp|GLGA_METJA|PROBABLE glycogen synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DAVKDLDII 9
D VKD+D++
Sbjct: 114 DEVKDIDVV 122


>sp|HMD_METVS|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 1 DAVKDLDII 9
+AVKD DI+
Sbjct: 137 EAVKDADIV 145


>sp|HMD_METM7|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus maripaludis (strain C7 /

Query: 1 DAVKDLDII 9
+AVKD DI+
Sbjct: 137 EAVKDADIV 145


>sp|Y1996_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 DAVKDLDII 9
D +KD+DI+
Sbjct: 527 DVIKDIDIL 535


>sp|HMD_METMP|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DAVKDLDII 9
+AVKD DI+
Sbjct: 137 EAVKDADIV 145


>sp|HMD_METTL|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanothermococcus thermolithotrophicus

Query: 1 DAVKDLDII 9
+AVKD DII
Sbjct: 137 EAVKDADII 145


>sp|RFRNP_HYPBU|RNA-FREE ribonuclease P|Hyperthermus butylicus (strain DSM 5456

Query: 1 DAVKDLDII 9
D+V+DLD +
Sbjct: 171 DSVEDLDAV 179


>sp|Y1178_METJA|UNCHARACTERIZED glycosyltransferase MJ1178|Methanocaldococcus jannaschii (strain

Query: 1 DAVKDLD 7
DA+KD+D
Sbjct: 199 DAIKDID 205


>sp|ILVC_METPE|KETOL-ACID reductoisomerase (NADP(+))|Methanosphaerula palustris (strain

Query: 1 DAVKDLDII 9
DAVK DII
Sbjct: 68 DAVKKADII 76


>sp|MTBA_METBA|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina barkeri

Query: 1 DAVKDLDI 8
DA+K+LD+
Sbjct: 227 DAMKELDV 234


>sp|SIHH_METTH|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 DAVKDLDII 9
DAVK+ DI+
Sbjct: 257 DAVKEADIL 265


>sp|Y663_PYRAB|PROBABLE S-adenosyl-L-methionine-binding protein PYRAB06630|Pyrococcus

Query: 3 VKDLDIID 10
++D+DI+D
Sbjct: 114 IRDVDILD 121


>sp|OTC_METBF|ORNITHINE carbamoyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 2 AVKDLDII 9
AVKD DII
Sbjct: 211 AVKDADII 218




180|Sequence|896|905|LDIIDNYDYS

>sp|AMPPA_PYRAB|AMP phosphorylase|Pyrococcus abyssi (strain GE5 /

Query: 1 LDIIDNYDYS 10
LDI+D Y +S
Sbjct: 63 LDILDAYQFS 72


>sp|HMD_METVO|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus voltae

Query: 3 IIDNYDYS 10
++DN+DY+
Sbjct: 75 VLDNFDYA 82


>sp|SYA_METLZ|ALANINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LDIIDNY 7
LDI DNY
Sbjct: 530 LDIFDNY 536


>sp|TRPG2_HALMA|ANTHRANILATE synthase component II|Haloarcula marismortui (strain ATCC 43049

Query: 3 IIDNYD 8
IIDNYD
Sbjct: 4 IIDNYD 9


>sp|TRPG_METTH|ANTHRANILATE synthase component 2|Methanothermobacter thermautotrophicus

Query: 3 IIDNYD 8
IIDNYD
Sbjct: 6 IIDNYD 11


>sp|TRPG_METTM|ANTHRANILATE synthase component 2|Methanothermobacter marburgensis (strain

Query: 3 IIDNYD 8
IIDNYD
Sbjct: 7 IIDNYD 12


>sp|Y298_METJA|UNCHARACTERIZED protein MJ0298|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DIIDNYD 8
DII+NYD
Sbjct: 39 DIIENYD 45


>sp|TRPG_HALSA|ANTHRANILATE synthase component 2|Halobacterium salinarum (strain ATCC 700922

Query: 3 IIDNYD 8
++DNYD
Sbjct: 5 VVDNYD 10


>sp|APGM_METLZ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanocorpusculum labreanum (strain ATCC

Query: 1 LDIIDNYD 8
+D++ NYD
Sbjct: 366 IDLVTNYD 373


>sp|TF2B2_SACS2|TRANSCRIPTION initiation factor IIB 2|Saccharolobus solfataricus (strain ATCC

Query: 2 DIIDNYD 8
DI+DN+D
Sbjct: 282 DIVDNFD 288


>sp|GGR_PICTO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Picrophilus torridus (strain ATCC 700027

Query: 4 IDNYDYS 10
IDN DYS
Sbjct: 315 IDNEDYS 321


>sp|DP2S_HALSA|DNA polymerase II small subunit|Halobacterium salinarum (strain ATCC

Query: 1 LDIIDNYD 8
LDI+D YD
Sbjct: 311 LDIVDIYD 318


>sp|DP2S_HALS3|DNA polymerase II small subunit|Halobacterium salinarum (strain ATCC

Query: 1 LDIIDNYD 8
LDI+D YD
Sbjct: 311 LDIVDIYD 318


>sp|SYK_METST|LYSINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LDIIDNYD 8
LD++D YD
Sbjct: 319 LDLMDQYD 326


>sp|AMYA_METJA|PUTATIVE alpha-amylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LDIIDNYDYS 10
L++ID YD+
Sbjct: 56 LELIDEYDFK 65


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 1 LDIIDNYD 8
LD+IDN +
Sbjct: 920 LDVIDNVE 927


>sp|PURP_METS3|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanobrevibacter smithii (strain

Query: 1 LDIIDNYD 8
+I+DNYD
Sbjct: 10 FEILDNYD 17


>sp|IF2B_METJA|TRANSLATION initiation factor 2 subunit|Methanocaldococcus jannaschii (strain

Query: 1 LDIIDNYDY 9
L+ ID YDY
Sbjct: 4 LENIDYYDY 12


>sp|Y1397_METJA|UNCHARACTERIZED protein MJ1397|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DIIDNYDYS 10
II+NY YS
Sbjct: 107 KIINNYPYS 115


>sp|THIC2_METST|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LDIIDNYD 8
LDI++ YD
Sbjct: 211 LDIVEEYD 218


>sp|PURP_METST|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosphaera stadtmanae (strain

Query: 1 LDIIDNYDYS 10
+DI++ YD S
Sbjct: 10 MDIVEKYDKS 19


>sp|HCP_METTH|HYDROXYLAMINE reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 IIDNYDYS 10
++DNYD +
Sbjct: 406 LVDNYDLT 413


>sp|SYFB_METMA|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DIIDNYD 8
DI+ NYD
Sbjct: 324 DILHNYD 330


>sp|SPEE_METJA|POLYAMINE aminopropyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LDIIDNYDY 9
++IID YD+
Sbjct: 41 IEIIDTYDF 49


>sp|ATGT_META3|TRNA-GUANINE(15) transglycosylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LDIIDNYDYS 10
+ +++NYDY+
Sbjct: 196 VPLMENYDYA 205


>sp|SYFB_METBF|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina barkeri (strain Fusaro /

Query: 2 DIIDNYD 8
DI+ NYD
Sbjct: 324 DILHNYD 330


>sp|TIAS_METJA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanocaldococcus jannaschii

Query: 5 DNYDY 9
DNYDY
Sbjct: 200 DNYDY 204




181|Sequence|901|910|NYDYSHTVKY

>sp|SYFB_METHJ|PHENYLALANINE--TRNA ligase beta subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 DYSHTVK 9
DYSH VK
Sbjct: 181 DYSHIVK 187


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 NYDYSHTVKY 10
NY YS T KY
Sbjct: 919 NYAYSQTEKY 928


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 NYDYSHT 7
++DY+HT
Sbjct: 239 DFDYAHT 245


>sp|AROC_METTP|CHORISMATE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 DYSHTVKY 10
DY++ VKY
Sbjct: 109 DYTYHVKY 116


>sp|Y1357_DESA1|MEMO1 family protein DKAM_1357|Desulfurococcus amylolyticus (strain DSM

Query: 3 DYSHTVKY 10
DYSH V Y
Sbjct: 269 DYSHVVGY 276


>sp|SYC_THEPD|CYSTEINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 2 YDYSH 6
YDYSH
Sbjct: 33 YDYSH 37


>sp|CAH_METTT|CARBONIC anhydrase|Methanosarcina thermophila (strain ATCC 43570

Query: 1 NYDYSHT 7
+Y YSHT
Sbjct: 222 DYAYSHT 228


>sp|KDGA_SULTO|2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE/2-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE aldolase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 NYDYSHTVKY 10
N D SH+++Y
Sbjct: 158 NQDLSHSLEY 167


>sp|AROC_META3|CHORISMATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 DYSHTVK 9
DY+H +K
Sbjct: 144 DYTHNIK 150


>sp|ENO_THEVO|ENOLASE volcanium (strain ATCC 51530

Query: 2 YDYSHTVK 9
Y Y HTV+
Sbjct: 245 YVYKHTVR 252




182|Sequence|906|915|HTVKYTPTQQ

>sp|RL15_META3|LARGE ribosomal subunit protein uL15|Methanococcus aeolicus (strain

Query: 1 HTVKYTP 7
HTVKY P
Sbjct: 46 HTVKYMP 52


>sp|PYLS_METBU|PYRROLYSINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 VKYTPTQ 9
VKYTP+Q
Sbjct: 149 VKYTPSQ 155


>sp|RL15_AERPE|LARGE ribosomal subunit protein uL15|Aeropyrum pernix (strain ATCC

Query: 2 TVKYTPT 8
T+KY PT
Sbjct: 49 TIKYAPT 55


>sp|Y2170_ARCFU|KELCH domain-containing protein AF_2170|Archaeoglobus fulgidus (strain

Query: 4 KYTPTQQ 10
KY+PT Q
Sbjct: 104 KYSPTDQ 110


>sp|MSMS_METAC|METHYL sulfide methyltransferase-associated sensor|Methanosarcina

Query: 1 HTVKYTP 7
H +K+TP
Sbjct: 903 HAIKFTP 909


>sp|Y1272_IGNH4|UPF0179 protein Igni_1272|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 TVKYTPTQ 9
TV+YTP++
Sbjct: 87 TVEYTPSK 94


>sp|SYT_NITMS|THREONINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 TVKYTPTQQ 10
+++YTPT++
Sbjct: 10 SIEYTPTKK 18




183|Sequence|911|920|TPTQQGNMQV

>sp|NQOR_METBF|NAD(P)H dehydrogenase (quinone)|Methanosarcina barkeri (strain Fusaro /

Query: 1 TPTQQGNM 8
TPT+ GNM
Sbjct: 85 TPTRYGNM 92


>sp|MSRA_SULAC|PEPTIDE methionine sulfoxide reductase MsrA|Sulfolobus acidocaldarius

Query: 1 TPTQQGN 7
TP +QGN
Sbjct: 81 TPNRQGN 87


>sp|NQOR_METAC|NAD(P)H dehydrogenase (quinone)|Methanosarcina acetivorans (strain ATCC

Query: 1 TPTQQGNM 8
TPT+ GNM
Sbjct: 85 TPTRYGNM 92


>sp|MCT_HALHT|SUCCINYL-COA:MESACONATE CoA-transferase|Haloarcula hispanica (strain ATCC 33960

Query: 1 TPTQQGN 7
+PT+QGN
Sbjct: 227 SPTRQGN 233


>sp|MCT_HALMA|SUCCINYL-COA:MESACONATE CoA-transferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 TPTQQGN 7
+PT+QGN
Sbjct: 227 SPTRQGN 233




184|Sequence|916|925|GNMQVLVTYG

>sp|CAS2_KORCO|CRISPR-ASSOCIATED endoribonuclease Cas2|Korarchaeum cryptofilum (strain OPF8)

Query: 1 GNMQVLVTY 9
GN++VLV Y
Sbjct: 4 GNLKVLVVY 12


>sp|BARAC_PYRHO|BROAD substrate specificity amino-acid racemase|Pyrococcus horikoshii

Query: 1 GNMQVLVTYG 10
GN + VTYG
Sbjct: 117 GNFEKKVTYG 126


>sp|THII_METJA|PROBABLE tRNA sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 MQVLVTYG 10
M++LV YG
Sbjct: 9 MEILVRYG 16


>sp|RS5_SULTO|SMALL ribosomal subunit protein uS5|Sulfurisphaera tokodaii (strain DSM

Query: 1 GNMQVLVTYG 10
GNM V+YG
Sbjct: 83 GNMDGYVSYG 92


>sp|RS5_SULAC|SMALL ribosomal subunit protein uS5|Sulfolobus acidocaldarius (strain

Query: 1 GNMQVLVTYG 10
GNM ++YG
Sbjct: 83 GNMDGYISYG 92




185|Sequence|921|930|LVTYGGDPIP

>sp|AMPPA_METJA|AMP phosphorylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VTYGGDPI 9
+TYGG PI
Sbjct: 317 ITYGGQPI 324


>sp|SYH_METJA|HISTIDINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 TYGGDPIP 10
T+GG+P P
Sbjct: 297 TFGGEPTP 304


>sp|Y1401_METJA|PROBABLE ATP-dependent helicase MJ1401|Methanocaldococcus jannaschii (strain

Query: 1 LVTYGGDPIP 10
LV Y G P+P
Sbjct: 387 LVLYNGRPVP 396


>sp|AMPPA_META3|AMP phosphorylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LVTYGGDPI 9
++TYGG PI
Sbjct: 317 VLTYGGQPI 325


>sp|AMPPA_PYRFU|AMP phosphorylase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VTYGGDPI 9
+TYGG PI
Sbjct: 317 ITYGGQPI 324


>sp|DNLI_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 5 GGDPIP 10
GGDP+P
Sbjct: 311 GGDPLP 316


>sp|AMPPA_THESM|AMP phosphorylase|Thermococcus sibiricus (strain DSM 12597

Query: 2 VTYGGDPI 9
+TYGG PI
Sbjct: 317 ITYGGQPI 324


>sp|AMPPA_THEKO|AMP phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VTYGGDPI 9
+TYGG PI
Sbjct: 317 ITYGGQPI 324


>sp|AMPPA_THEON|AMP phosphorylase|Thermococcus onnurineus (strain NA1)

Query: 2 VTYGGDPI 9
+TYGG PI
Sbjct: 317 ITYGGQPI 324


>sp|AMPPA_PYRHO|AMP phosphorylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VTYGGDPI 9
+TYGG PI
Sbjct: 317 ITYGGQPI 324


>sp|AMPPA_PYRAB|AMP phosphorylase|Pyrococcus abyssi (strain GE5 /

Query: 2 VTYGGDPI 9
+TYGG PI
Sbjct: 317 ITYGGQPI 324


>sp|AMPP1_ARCFU|AMP phosphorylase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VTYGGDPI 9
+TYGG P+
Sbjct: 318 ITYGGQPV 325


>sp|AMPPA_THEGJ|AMP phosphorylase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 VTYGGDPI 9
+TYGG PI
Sbjct: 317 ITYGGQPI 324


>sp|LYSJ_SACS2|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Saccharolobus

Query: 3 TYGGDPI 9
TYGG+P+
Sbjct: 266 TYGGNPL 272


>sp|PROB_METMA|GLUTAMATE 5-kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 TYGGDP 8
+YGGDP
Sbjct: 216 SYGGDP 221


>sp|PROB_METBF|GLUTAMATE 5-kinase|Methanosarcina barkeri (strain Fusaro /

Query: 3 TYGGDP 8
+YGGDP
Sbjct: 216 SYGGDP 221


>sp|PROB_METAC|GLUTAMATE 5-kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 TYGGDP 8
+YGGDP
Sbjct: 216 SYGGDP 221


>sp|LYSJ_SULAC|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Sulfolobus

Query: 3 TYGGDPI 9
TYGG+P+
Sbjct: 265 TYGGNPM 271


>sp|LYSJ_SULTO|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Sulfurisphaera

Query: 3 TYGGDPI 9
TYGG+P+
Sbjct: 265 TYGGNPM 271


>sp|DTDA_CENSY|D-AMINOACYL-TRNA deacylase|Cenarchaeum symbiosum (strain A)

Query: 1 LVTYGGDP 8
LV +GGDP
Sbjct: 4 LVAHGGDP 11


>sp|Y674_METJA|UNCHARACTERIZED protein MJ0674|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 GGDPIP 10
GGDP P
Sbjct: 180 GGDPTP 185


>sp|HELS_METAR|ATP-DEPENDENT DNA helicase Hel308|Methanocella arvoryzae (strain DSM 22066

Query: 2 VTYGGDPIP 10
V YG PIP
Sbjct: 365 VNYGSVPIP 373


>sp|AMPPA_METM6|AMP phosphorylase|Methanococcus maripaludis (strain C6 /

Query: 1 LVTYGGDPI 9
++TYGG P+
Sbjct: 318 VLTYGGQPL 326


>sp|AMPPA_HYPBU|AMP phosphorylase|Hyperthermus butylicus (strain DSM 5456

Query: 2 VTYGGDPI 9
+T+GG+PI
Sbjct: 318 ITFGGEPI 325


>sp|SUCD1_ARCFU|SUCCINATE--COA ligase [ADP-forming] subunit alpha|Archaeoglobus fulgidus (strain

Query: 1 LVTYGGDPIP 10
+V GGDP+P
Sbjct: 178 VVGIGGDPMP 187


>sp|AMPPA_METVS|AMP phosphorylase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LVTYGGDPI 9
++TYGG P+
Sbjct: 318 VLTYGGQPL 326


>sp|AMPPA_METM7|AMP phosphorylase|Methanococcus maripaludis (strain C7 /

Query: 1 LVTYGGDPI 9
++TYGG P+
Sbjct: 318 VLTYGGQPL 326


>sp|AMPPA_METM5|AMP phosphorylase|Methanococcus maripaludis (strain C5 /

Query: 1 LVTYGGDPI 9
++TYGG P+
Sbjct: 318 VLTYGGQPL 326


>sp|AMPPA_METMP|AMP phosphorylase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LVTYGGDPI 9
++TYGG P+
Sbjct: 318 VLTYGGQPL 326


>sp|AMPPA_METLZ|AMP phosphorylase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 VTYGGDPI 9
VT+GG PI
Sbjct: 318 VTFGGSPI 325


>sp|RNZ_SACI2|RIBONUCLEASE Z|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 VTYGGDPIP 10
V Y GD IP
Sbjct: 196 VAYTGDTIP 204


>sp|RNZ_SACI6|RIBONUCLEASE Z|Saccharolobus islandicus (strain M.16.4 /

Query: 2 VTYGGDPIP 10
V Y GD IP
Sbjct: 196 VAYTGDTIP 204


>sp|RNZ_SACI4|RIBONUCLEASE Z|Saccharolobus islandicus (strain M.14.25 /

Query: 2 VTYGGDPIP 10
V Y GD IP
Sbjct: 196 VAYTGDTIP 204


>sp|RNZ_SACI3|RIBONUCLEASE Z|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 VTYGGDPIP 10
V Y GD IP
Sbjct: 196 VAYTGDTIP 204


>sp|RNZ_SACI7|RIBONUCLEASE Z|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 VTYGGDPIP 10
V Y GD IP
Sbjct: 196 VAYTGDTIP 204


>sp|RNZ_SACI1|RIBONUCLEASE Z|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 VTYGGDPIP 10
V Y GD IP
Sbjct: 196 VAYTGDTIP 204


>sp|SLAB_METS5|S-LAYER protein B|Metallosphaera sedula (strain ATCC 51363

Query: 1 LVTYGGDPI 9
+VT+ G PI
Sbjct: 236 MVTFAGQPI 244


>sp|HEMH_THEVO|FERROCHELATASE volcanium (strain ATCC 51530

Query: 4 YGGDPIP 10
+GG P+P
Sbjct: 27 FGGKPVP 33


>sp|CDAT8_METKA|TRNA(CYTOSINE(8)) deaminase|Methanopyrus kandleri (strain AV19 /

Query: 1 LVTYGGDP 8
L+T+GG+P
Sbjct: 123 LLTFGGNP 130


>sp|DPS_SACS2|DNA protection during starvation protein|Saccharolobus solfataricus

Query: 2 VTYGGDP 8
+TYG DP
Sbjct: 137 MTYGKDP 143


>sp|ARGD_ARCFU|ACETYLORNITHINE aminotransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 TYGGDPI 9
T+GG+P+
Sbjct: 272 TFGGNPL 278


>sp|APGM_PYRHO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LVTYGGDPIP 10
++ + GDP+P
Sbjct: 353 VMNHSGDPVP 362


>sp|MES_EURX9|METALLOPTERIN-DEPENDENT ergothioneine synthase|Euryarchaeota archaeon (strain ADurb.Bin009)

Query: 1 LVTYGGDPIP 10
L YG DP+P
Sbjct: 567 LEEYGYDPLP 576


>sp|APGM_THEGJ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermococcus gammatolerans (strain DSM

Query: 1 LVTYGGDPIP 10
++ + GDP+P
Sbjct: 352 VMNHSGDPVP 361


>sp|DACZ_HALVD|DIADENYLATE cyclase|Haloferax volcanii (strain ATCC 29605

Query: 3 TYGGDP 8
T+GGDP
Sbjct: 91 TFGGDP 96


>sp|APGM_METS3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanobrevibacter smithii (strain ATCC

Query: 1 LVTYGGDPIP 10
++ + GDP+P
Sbjct: 353 VLNHSGDPVP 362


>sp|APGM_SACI7|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain Y.G.57.14

Query: 4 YGGDPIP 10
+ GDP+P
Sbjct: 358 HSGDPVP 364


>sp|APGM_SACI6|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 YGGDPIP 10
+ GDP+P
Sbjct: 358 HSGDPVP 364


>sp|APGM_SACI4|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 YGGDPIP 10
+ GDP+P
Sbjct: 358 HSGDPVP 364


>sp|APGM_SACI3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.16.27)

Query: 4 YGGDPIP 10
+ GDP+P
Sbjct: 358 HSGDPVP 364


>sp|APGM_SACI2|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 YGGDPIP 10
+ GDP+P
Sbjct: 358 HSGDPVP 364


>sp|APGM_SACI1|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain Y.N.15.51

Query: 4 YGGDPIP 10
+ GDP+P
Sbjct: 358 HSGDPVP 364


>sp|APGM_PYRFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LVTYGGDPIP 10
++ + GDP+P
Sbjct: 352 VMNHSGDPVP 361


>sp|BASB_HALS3|CHEMOTACTIC signal transduction system substrate-binding|Halobacterium

Query: 3 TYGGDPIP 10
+Y GDP P
Sbjct: 322 SYSGDPTP 329


>sp|APGM_METS5|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Metallosphaera sedula (strain ATCC 51363

Query: 1 LVTYGGDPIP 10
L + GDP+P
Sbjct: 354 LREHSGDPVP 363


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LVTYGGD 7
L+TY GD
Sbjct: 206 LITYNGD 212


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 1 LVTYGGD 7
L+TY GD
Sbjct: 173 LITYNGD 179


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 1 LVTYGGD 7
L+TY GD
Sbjct: 206 LITYNGD 212


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 1 LVTYGGD 7
L+TY GD
Sbjct: 206 LITYNGD 212


>sp|AMPPA_METAR|AMP phosphorylase|Methanocella arvoryzae (strain DSM 22066

Query: 2 VTYGGDPI 9
+TYGG P+
Sbjct: 317 LTYGGTPL 324


>sp|APGM_THEKO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermococcus kodakarensis (strain ATCC

Query: 1 LVTYGGDPIP 10
++ + GDP+P
Sbjct: 352 VMNHSGDPVP 361


>sp|DPOL_THEFM|DNA polymerase|Thermococcus fumicolans

Query: 1 LVTYGGD 7
L+TY GD
Sbjct: 206 LITYNGD 212


>sp|ARGJ_METKA|GLUTAMATE N-acetyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 LVTYGGDPI 9
+VTY G P+
Sbjct: 330 IVTYEGGPV 338


>sp|APGM_PICTO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Picrophilus torridus (strain ATCC 700027

Query: 4 YGGDPIP 10
+ GDP+P
Sbjct: 347 HSGDPVP 353


>sp|COXX2_PYRCJ|PROTOHEME IX farnesyltransferase 2|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 VTYGGDPI 9
V +GGDP+
Sbjct: 222 VLFGGDPL 229


>sp|Y1214_PYRHO|UNCHARACTERIZED ABC transporter extracellular-binding protein|Pyrococcus horikoshii

Query: 2 VTYGGDPIP 10
V YG PIP
Sbjct: 301 VDYGAIPIP 309


>sp|HTPX_PYRIL|PROTEASE HtpX homolog|Pyrobaculum islandicum (strain DSM 4184

Query: 2 VTYGGDPIP 10
VTYG P P
Sbjct: 103 VTYGARPDP 111


>sp|Y1625_ARCFU|UNCHARACTERIZED protein AF_1625|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VTYGGD 7
V+YGGD
Sbjct: 193 VSYGGD 198


>sp|LYSJ_PYRFU|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 3 TYGGDPI 9
T+GG+P+
Sbjct: 255 TFGGNPL 261


>sp|DPOL_THEGO|DNA polymerase|Thermococcus gorgonarius

Query: 1 LVTYGGD 7
L+TY GD
Sbjct: 206 LITYNGD 212


>sp|RNZ_NATPD|RIBONUCLEASE Z|Natronomonas pharaonis (strain ATCC 35678

Query: 4 YGGDPIP 10
Y GDP P
Sbjct: 273 YAGDPSP 279


>sp|PURP_CALMQ|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Caldivirga maquilingensis (strain ATCC

Query: 1 LVTYGGDPIP 10
L+ Y G PIP
Sbjct: 123 LLEYAGIPIP 132


>sp|DPOL_THES9|DNA polymerase|Thermococcus sp. (strain 9oN-7)

Query: 1 LVTYGGD 7
L+TY GD
Sbjct: 206 LITYNGD 212


>sp|HIS6_METTH|IMIDAZOLE glycerol phosphate synthase subunit|Methanothermobacter

Query: 2 VTYGGDPI 9
+ Y GDP+
Sbjct: 30 IRYAGDPV 37


>sp|DNLI_HALVD|DNA ligase|Haloferax volcanii (strain ATCC 29605

Query: 5 GGDPIP 10
GG+P+P
Sbjct: 337 GGEPLP 342


>sp|LYSJ_PYRAB|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 3 TYGGDPI 9
T+GG+P+
Sbjct: 255 TFGGNPL 261


>sp|DPOL_DESST|DNA polymerase|Desulfurococcus sp. (strain Tok)

Query: 1 LVTYGGD 7
L+TY GD
Sbjct: 206 LITYNGD 212


>sp|AMPPA_METAC|AMP phosphorylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 VTYGGDPI 9
+TYG PI
Sbjct: 316 ITYGSSPI 323


>sp|LYSJ_PYRHO|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 3 TYGGDPI 9
T+GG+P+
Sbjct: 255 TFGGNPL 261


>sp|AMPPA_METBF|AMP phosphorylase|Methanosarcina barkeri (strain Fusaro /

Query: 2 VTYGGDPI 9
+TYG PI
Sbjct: 316 ITYGSSPI 323


>sp|ARGD_METJA|ACETYLORNITHINE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 TYGGDPI 9
T+GG+P+
Sbjct: 281 TFGGNPL 287


>sp|LYSJ_THEKO|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 3 TYGGDPI 9
T+GG+P+
Sbjct: 255 TFGGNPL 261


>sp|APGM_PYRAB|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrococcus abyssi (strain GE5 /

Query: 4 YGGDPIP 10
+ GDP+P
Sbjct: 354 HSGDPVP 360


>sp|APGM_AERPE|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Aeropyrum pernix (strain ATCC 700893

Query: 4 YGGDPIP 10
+ GDP+P
Sbjct: 374 HSGDPVP 380


>sp|SYT_METPE|THREONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 LVTYGGDPI 9
++ YGG P+
Sbjct: 237 VLEYGGSPV 245


>sp|RNZ_META3|RIBONUCLEASE Z|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 VTYGGDPIP 10
V Y GD +P
Sbjct: 205 VAYSGDTMP 213


>sp|PYRH_IGNH4|URIDYLATE kinase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 VTYGGDP 8
V YGG+P
Sbjct: 197 VIYGGEP 203


>sp|AMPPA_METMA|AMP phosphorylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VTYGGDPI 9
+TYG PI
Sbjct: 317 ITYGSSPI 324


>sp|GGR2_METST|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 VTYGGDPI 9
+ GGDP+
Sbjct: 256 INVGGDPV 263


>sp|Y194_PYRAB|UPF0146 protein PYRAB01940|Pyrococcus abyssi (strain GE5 /

Query: 1 LVTYGGDPI 9
L+TY G PI
Sbjct: 118 LITYRGIPI 126


>sp|ORNAT_THEKO|ORNITHINE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 TYGGDPI 9
T+GG+P+
Sbjct: 320 TFGGNPV 326


>sp|DPOL_PYRWO|DNA polymerase|Pyrococcus woesei

Query: 1 LVTYGGD 7
+VTY GD
Sbjct: 206 IVTYNGD 212


>sp|DPOL_PYRFU|DNA polymerase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LVTYGGD 7
+VTY GD
Sbjct: 206 IVTYNGD 212


>sp|HEM3_METBF|PROBABLE porphobilinogen deaminase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LVTYGGDPI 9
L+TY G P+
Sbjct: 102 LLTYDGTPL 110


>sp|ARGD_METKA|ACETYLORNITHINE aminotransferase|Methanopyrus kandleri (strain AV19 /

Query: 3 TYGGDPI 9
T+GG+P+
Sbjct: 274 TFGGNPL 280




186|Sequence|926|935|GDPIPKSPFT

>sp|MTMB2_METBA|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri

Query: 3 PIPKSPF 9
PIPKSP+
Sbjct: 169 PIPKSPY 175


>sp|MTMB1_METBA|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri

Query: 3 PIPKSPF 9
PIPKSP+
Sbjct: 169 PIPKSPY 175


>sp|MTMB3_METBF|MONOMETHYLAMINE methyltransferase MtmB3|Methanosarcina barkeri (strain Fusaro /

Query: 3 PIPKSPF 9
P+PKSP+
Sbjct: 169 PVPKSPY 175


>sp|MTMB2_METBF|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri (strain Fusaro /

Query: 3 PIPKSPF 9
P+PKSP+
Sbjct: 169 PVPKSPY 175


>sp|MTMB1_METBF|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri (strain Fusaro /

Query: 3 PIPKSPF 9
P+PKSP+
Sbjct: 169 PVPKSPY 175


>sp|SYA_METJA|ALANINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GDPIPKSPFT 10
G PI K P+T
Sbjct: 49 GKPITKKPYT 58


>sp|MTMB2_METAC|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina acetivorans (strain ATCC

Query: 3 PIPKSPF 9
P+PKSP+
Sbjct: 169 PVPKSPY 175


>sp|MTMB1_METAC|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina acetivorans (strain ATCC

Query: 3 PIPKSPF 9
P+PKSP+
Sbjct: 169 PVPKSPY 175


>sp|CARB_METLZ|CARBAMOYL phosphate synthase large chain|Methanocorpusculum labreanum (strain

Query: 1 GDPIPKS 7
G+PIPKS
Sbjct: 138 GEPIPKS 144


>sp|HEM1_IGNH4|GLUTAMYL-TRNA reductase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GDPIPKSPF 9
G+PIP+ F
Sbjct: 87 GEPIPEEKF 95


>sp|SYC_METVS|CYSTEINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GDPIPKSPF 9
G+P KSPF
Sbjct: 189 GEPYWKSPF 197


>sp|CARB_METB6|CARBAMOYL phosphate synthase large chain|Methanoregula boonei (strain DSM

Query: 1 GDPIPKS 7
G+P+PKS
Sbjct: 138 GEPVPKS 144


>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GDPIPKSPF 9
G+P+ K PF
Sbjct: 52 GNPVFKKPF 60


>sp|Y676_METJA|PUTATIVE hydrogenase expression/formation protein MJ0676|Methanocaldococcus

Query: 1 GDPIPK 6
GDPIP+
Sbjct: 328 GDPIPR 333


>sp|Y1487_METJA|UNCHARACTERIZED methyltransferase MJ1487|Methanocaldococcus jannaschii (strain ATCC

Query: 3 PIPKSPF 9
P+P++PF
Sbjct: 372 PLPQTPF 378


>sp|BIOD_NITMS|ATP-DEPENDENT dethiobiotin synthetase BioD|Nitrosopumilus maritimus (strain

Query: 3 PIPKSPFT 10
PIP SP+T
Sbjct: 76 PIPASPYT 83


>sp|MTMB_METMA|MONOMETHYLAMINE methyltransferase MtmB|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PIPKSPF 9
PIP SP+
Sbjct: 169 PIPGSPY 175


>sp|SYV_METMP|VALINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 DPIPKSPFT 10
DP +SP+T
Sbjct: 430 DPTKESPYT 438


>sp|SYC_METM6|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 GDPIPKSPF 9
G+P KSPF
Sbjct: 189 GEPKWKSPF 197


>sp|SPCS_METJA|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 DPIPKSP 8
DP PK+P
Sbjct: 99 DPQPKAP 105


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 1 GDPIPKS 7
G+P+P+S
Sbjct: 140 GEPVPRS 146


>sp|CARB_METPE|CARBAMOYL phosphate synthase large chain|Methanosphaerula palustris (strain

Query: 1 GDPIPKS 7
G+P+P+S
Sbjct: 138 GEPVPRS 144


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 PIPKSPF 9
P P SPF
Sbjct: 36 PYPNSPF 42


>sp|CARB_METMJ|CARBAMOYL phosphate synthase large chain|Methanoculleus marisnigri (strain

Query: 1 GDPIPKS 7
G+P+P+S
Sbjct: 138 GEPVPRS 144


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1

Query: 1 GDPIPKS 7
G+P+P+S
Sbjct: 138 GEPVPRS 144


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 3 PIPKSPF 9
P P SPF
Sbjct: 47 PYPNSPF 53


>sp|SYT_METPE|THREONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 GDPIPKSPFT 10
DP+PK T
Sbjct: 24 ADPVPKDGMT 33


>sp|NADM_METTI|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanolobus tindarius

Query: 5 PKSPFT 10
PK+PFT
Sbjct: 44 PKNPFT 49


>sp|SPCS_METKA|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanopyrus kandleri (strain AV19 /

Query: 2 DPIPKSP 8
DP PK+P
Sbjct: 95 DPQPKAP 101




187|Sequence|931|940|KSPFTVGVAA

>sp|Y662_METJA|UNCHARACTERIZED protein MJ0662|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KSPFTVGVA 9
KSPF VGVA
Sbjct: 116 KSPFQVGVA 124


>sp|HIS8_THEGJ|HISTIDINOL-PHOSPHATE aminotransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 KSPFTVGV 8
KSPF+VG+
Sbjct: 230 KSPFSVGI 237


>sp|NADM_CALMQ|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 KSPFTVG 7
K PFTVG
Sbjct: 45 KDPFTVG 51


>sp|RL30_METJA|LARGE ribosomal subunit protein uL30|Methanocaldococcus jannaschii

Query: 1 KSPFTVGVA 9
K PF+VG A
Sbjct: 130 KKPFSVGGA 138


>sp|COFG_METKA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 KSPFTVGV 8
K PFT G+
Sbjct: 165 KVPFTTGI 172


>sp|Y087_METJA|PUTATIVE ABC transporter permease protein|Methanocaldococcus jannaschii

Query: 2 SPFTVGVA 9
SPFT+G++
Sbjct: 96 SPFTMGIS 103


>sp|NADM_METTI|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanolobus tindarius

Query: 1 KSPFTVG 7
K+PFT G
Sbjct: 45 KNPFTAG 51


>sp|Y1246_PYRAB|UNCHARACTERIZED protein PYRAB12460|Pyrococcus abyssi (strain GE5 /

Query: 2 SPFTVGVA 9
PF VGVA
Sbjct: 37 DPFMVGVA 44


>sp|COFG_METVS|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 KSPFTVGV 8
K PFT G+
Sbjct: 192 KIPFTTGI 199


>sp|COFG_METMP|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 KSPFTVGV 8
K PFT G+
Sbjct: 170 KIPFTTGI 177


>sp|COFG_METM7|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C7 /

Query: 1 KSPFTVGV 8
K PFT G+
Sbjct: 192 KIPFTTGI 199


>sp|COFG_METM6|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C6 /

Query: 1 KSPFTVGV 8
K PFT G+
Sbjct: 192 KIPFTTGI 199


>sp|COFG_METM5|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C5 /

Query: 1 KSPFTVGV 8
K PFT G+
Sbjct: 192 KIPFTTGI 199


>sp|COFG_META3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 KSPFTVGV 8
K PFT G+
Sbjct: 197 KIPFTTGI 204


>sp|NADM_PYRFU|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KSPFTVG 7
K+PFT G
Sbjct: 45 KNPFTTG 51


>sp|Y856_PYRHO|UNCHARACTERIZED protein PH0856|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 SPFTVGVA 9
PF VGVA
Sbjct: 37 DPFIVGVA 44


>sp|COFG_METBU|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 KSPFTVGV 8
K PFT G+
Sbjct: 161 KIPFTTGI 168


>sp|NADM_PYRHO|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KSPFTVG 7
K+PFT G
Sbjct: 45 KNPFTTG 51


>sp|HIS8_THEKO|HISTIDINOL-PHOSPHATE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KSPFTVGVAA 10
KSPF+V + A
Sbjct: 230 KSPFSVDIFA 239


>sp|NADM_PYRAB|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 KSPFTVG 7
K+PFT G
Sbjct: 45 KNPFTTG 51


>sp|Y876_METJA|PUTATIVE ABC transporter permease protein|Methanocaldococcus jannaschii

Query: 2 SPFTVGVAA 10
SP+T G+++
Sbjct: 89 SPYTTGISS 97




188|Sequence|936|945|VGVAAPLDLS

>sp|SYA_HALMA|ALANINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 VGVAAPLD 8
VGV APLD
Sbjct: 389 VGVDAPLD 396


>sp|SYA_NATPD|ALANINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VGVAAPLD 8
VGV APLD
Sbjct: 390 VGVDAPLD 397


>sp|RADA_THEVO|DNA repair and recombination protein|Thermoplasma volcanium (strain

Query: 1 VGVAAPLDLS 10
+ VA+P DLS
Sbjct: 39 IAVASPKDLS 48


>sp|RADA_THEAC|DNA repair and recombination protein|Thermoplasma acidophilum (strain

Query: 1 VGVAAPLDLS 10
+ VA+P DLS
Sbjct: 39 IAVASPKDLS 48


>sp|RADA_SULAC|DNA repair and recombination protein|Sulfolobus acidocaldarius

Query: 1 VGVAAPLDLS 10
V VA P DLS
Sbjct: 36 VAVATPQDLS 45


>sp|RADA_SULTO|DNA repair and recombination protein|Sulfurisphaera tokodaii (strain

Query: 1 VGVAAPLDLS 10
V VA+P DLS
Sbjct: 39 VAVASPQDLS 48


>sp|RADA_METS5|DNA repair and recombination protein|Metallosphaera sedula (strain

Query: 1 VGVAAPLDLS 10
+ VA+P DLS
Sbjct: 39 IAVASPQDLS 48


>sp|SYA_HALWD|ALANINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 VGVAAPLD 8
+G+ APLD
Sbjct: 388 IGIDAPLD 395


>sp|SYA_HALLT|ALANINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 VGVAAPLD 8
+G+ APLD
Sbjct: 389 IGIDAPLD 396


>sp|GCSPA_THEVO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 VGVAAPLD 8
+G+ +PLD
Sbjct: 32 IGIGSPLD 39


>sp|HMDH_AERPE|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Aeropyrum pernix (strain ATCC 700893

Query: 1 VGVAAPLDLS 10
VGVA PL ++
Sbjct: 84 VGVAGPLRIN 93




189|Sequence|941|950|PLDLSKIKLN

>sp|NFI_THEKO|ENDONUCLEASE V|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PLDLSKIK 8
PL++SKIK
Sbjct: 24 PLEVSKIK 31


>sp|PYRG_THEAC|CTP synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PLDLSKIKLN 10
PLD SK+ L+
Sbjct: 507 PLDPSKVHLH 516


>sp|SYM_NANEQ|METHIONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 PLDLSKIKLN 10
P++L+ IKLN
Sbjct: 54 PIELNAIKLN 63




190|Sequence|946|955|KIKLNGLENR

>sp|HMEB_ARCFU|HDR-LIKE menaquinol oxidoreductase integral membrane|Archaeoglobus

Query: 1 KIKLNGLENR 10
K+ LNGL NR
Sbjct: 38 KMGLNGLSNR 47


>sp|TRM1_METMA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina mazei (strain

Query: 2 IKLNGLENR 10
IK+NGLE +
Sbjct: 107 IKINGLEEK 115


>sp|TRM1_METAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina acetivorans

Query: 2 IKLNGLENR 10
IK+NGLE +
Sbjct: 107 IKINGLEEK 115


>sp|RL5_METST|LARGE ribosomal subunit protein uL5|Methanosphaera stadtmanae (strain

Query: 4 LNGLENR 10
L+GLENR
Sbjct: 79 LSGLENR 85


>sp|Y2387_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 4 LNGLENR 10
L+GLENR
Sbjct: 106 LSGLENR 112


>sp|DTDA_METLZ|D-AMINOACYL-TRNA deacylase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 IKLNGLEN 9
IK+ GLEN
Sbjct: 434 IKIPGLEN 441


>sp|ASSY_METKA|ARGININOSUCCINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 IKLNGLENR 10
+KL+GL+ R
Sbjct: 379 VKLHGLQER 387


>sp|IXTPA_KORCO|DITP/XTP pyrophosphatase|Korarchaeum cryptofilum (strain OPF8)

Query: 4 LNGLENR 10
+NG+ENR
Sbjct: 94 MNGVENR 100




191|Sequence|951|960|GLENRVEVGK

>sp|Y426_ARCFU|UNCHARACTERIZED protein AF_0426|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LENRVEVGK 10
LE R+E+GK
Sbjct: 135 LEGRIELGK 143


>sp|Y1807_METBF|PROTEIN Mbar_A1807|Methanosarcina barkeri (strain Fusaro /

Query: 2 LENRVEVGK 10
L R+EVGK
Sbjct: 119 LPERIEVGK 127


>sp|Y798_METJA|TPR repeat-containing protein MJ0798|Methanocaldococcus jannaschii

Query: 2 LENRVEVGK 10
L+NR+++GK
Sbjct: 22 LKNRLKIGK 30


>sp|RL5_METST|LARGE ribosomal subunit protein uL5|Methanosphaera stadtmanae (strain

Query: 1 GLENRVEVGK 10
GLENR++ +
Sbjct: 81 GLENRIKASQ 90


>sp|SYP_PYRCJ|PROLINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GLENRVEVGK 10
G+ RVEVGK
Sbjct: 349 GVPLRVEVGK 358


>sp|SYP_PYRAR|PROLINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GLENRVEVGK 10
G+ RVEVGK
Sbjct: 349 GVPLRVEVGK 358


>sp|TYSY_METMA|PUTATIVE thymidylate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LENRVEVGK 10
+EN+ E+G+
Sbjct: 1 MENKFEIGR 9




192|Sequence|956|965|VEVGKDQEFT

>sp|Y2028_ARCFU|UNCHARACTERIZED protein AF_2028|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VEVGKDQEFT 10
V++G+D+ FT
Sbjct: 356 VQIGRDESFT 365


>sp|AATD_THEVO|A-TYPE ATP synthase subunit D|Thermoplasma volcanium (strain ATCC 51530

Query: 1 VEVGKDQE 8
+E GKD+E
Sbjct: 202 IEAGKDEE 209


>sp|AGLB1_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VEVGKDQEFT 10
++VG D+E+T
Sbjct: 857 LKVGVDKEYT 866


>sp|METAA_METAX|HOMOSERINE O-acetyltransferase|Methanomethylophilus alvi (strain Mx1201)

Query: 2 EVGKDQE 8
E+GKD E
Sbjct: 303 EIGKDSE 309


>sp|AATA_IGNH4|A-TYPE ATP synthase subunit A|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 VEVGKD 6
VEVGKD
Sbjct: 29 VEVGKD 34


>sp|PYRC_PYRFU|DIHYDROOROTASE furiosus (strain ATCC 43587

Query: 2 EVGKDQEFT 10
E GKD +FT
Sbjct: 332 EKGKDADFT 340


>sp|RL6_METTP|LARGE ribosomal subunit protein uL6|Methanothrix thermoacetophila (strain

Query: 1 VEVGKDQ 7
VEVGKD+
Sbjct: 128 VEVGKDE 134


>sp|PUR7_METJA|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VEVGKDQE 8
+E+GKD+E
Sbjct: 184 IEIGKDRE 191




193|Sequence|961|970|DQEFTVDTRG

>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 DQEFTVDTRG 10
D EFTV+T G
Sbjct: 908 DGEFTVETDG 917


>sp|ASSY_METBU|ARGININOSUCCINATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DQEFTVDTR 9
D+ FT+D R
Sbjct: 57 DKHFTLDVR 65


>sp|PURL_METS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 DQEFTVD 7
D EFT+D
Sbjct: 695 DNEFTID 701




194|Sequence|966|975|VDTRGAGGQG

>sp|TRPD_SACS2|ANTHRANILATE phosphoribosyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 VDTRGAGGQG 10
+DT G GG G
Sbjct: 75 IDTAGTGGDG 84


>sp|TRPD_SACI7|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 1 VDTRGAGGQG 10
+DT G GG G
Sbjct: 75 IDTAGTGGDG 84


>sp|TRPD_SACI6|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain M.16.4

Query: 1 VDTRGAGGQG 10
+DT G GG G
Sbjct: 75 IDTAGTGGDG 84


>sp|TRPD_SACI4|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 1 VDTRGAGGQG 10
+DT G GG G
Sbjct: 75 IDTAGTGGDG 84


>sp|TRPD_SACI3|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 1 VDTRGAGGQG 10
+DT G GG G
Sbjct: 75 IDTAGTGGDG 84


>sp|TRPD_SACI2|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 1 VDTRGAGGQG 10
+DT G GG G
Sbjct: 75 IDTAGTGGDG 84


>sp|TRPD_SACI1|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 1 VDTRGAGGQG 10
+DT G GG G
Sbjct: 75 IDTAGTGGDG 84


>sp|TRPD_SULTO|ANTHRANILATE phosphoribosyltransferase|Sulfurisphaera tokodaii (strain DSM

Query: 1 VDTRGAGGQG 10
+DT G GG G
Sbjct: 75 LDTAGTGGDG 84


>sp|TRPD_PYRAB|ANTHRANILATE phosphoribosyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 DTRGAGGQG 10
DT G GG G
Sbjct: 69 DTAGTGGDG 77


>sp|TRPD_CALMQ|ANTHRANILATE phosphoribosyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 1 VDTRGAGGQG 10
+DT G GG G
Sbjct: 75 IDTAGTGGDG 84


>sp|TRUD_METBF|PROBABLE tRNA pseudouridine synthase D|Methanosarcina barkeri (strain

Query: 2 DTRGAGGQ 9
DT G GGQ
Sbjct: 18 DTDGLGGQ 25


>sp|TRPD_SULAC|ANTHRANILATE phosphoribosyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 1 VDTRGAGGQG 10
+DT G GG G
Sbjct: 70 LDTAGTGGDG 79


>sp|TRPD_METVS|ANTHRANILATE phosphoribosyltransferase|Methanococcus vannielii (strain ATCC

Query: 2 DTRGAGGQG 10
DT G GG G
Sbjct: 69 DTCGTGGDG 77


>sp|TRPD_METM7|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C7 /

Query: 2 DTRGAGGQG 10
DT G GG G
Sbjct: 69 DTCGTGGDG 77


>sp|TRPD_METM5|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C5 /

Query: 2 DTRGAGGQG 10
DT G GG G
Sbjct: 69 DTCGTGGDG 77


>sp|TRPD_META3|ANTHRANILATE phosphoribosyltransferase|Methanococcus aeolicus (strain ATCC

Query: 2 DTRGAGGQG 10
DT G GG G
Sbjct: 70 DTCGTGGDG 78


>sp|TRPD_METMP|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain DSM

Query: 2 DTRGAGGQG 10
DT G GG G
Sbjct: 69 DTCGTGGDG 77


>sp|TRUD_METMA|PROBABLE tRNA pseudouridine synthase D|Methanosarcina mazei (strain ATCC

Query: 2 DTRGAGGQ 9
DT G GGQ
Sbjct: 18 DTTGLGGQ 25


>sp|Y1625_ARCFU|UNCHARACTERIZED protein AF_1625|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VDTRGAGGQG 10
V + G GGQG
Sbjct: 374 VSSGGLGGQG 383


>sp|TRPD_METM6|ANTHRANILATE phosphoribosyltransferase|Methanococcus maripaludis (strain C6 /

Query: 2 DTRGAGGQG 10
DT G GG G
Sbjct: 69 DTCGTGGDG 77


>sp|PELO_CENSY|PROTEIN pelota homolog|Cenarchaeum symbiosum (strain A)

Query: 4 RGAGGQG 10
RG+GGQG
Sbjct: 122 RGSGGQG 128


>sp|TRPD_THEKO|ANTHRANILATE phosphoribosyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 2 DTRGAGGQG 10
DT G GG G
Sbjct: 71 DTAGTGGDG 79




195|Sequence|971|980|AGGQGKLDVT

>sp|TRMY_HALVD|TRNA (pseudouridine(54)-N(1))-methyltransferase|Haloferax volcanii

Query: 1 AGGQGKLDV 9
AGG G+LDV
Sbjct: 23 AGGAGRLDV 31


>sp|TRMY_METLZ|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanocorpusculum

Query: 2 GGQGKLDV 9
GG G++DV
Sbjct: 24 GGAGRMDV 31


>sp|TRMY_METAR|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanocella arvoryzae

Query: 2 GGQGKLDV 9
GG G++D+
Sbjct: 24 GGAGRMDI 31




196|Sequence|976|985|KLDVTILSPS

>sp|Y1421_ARCFU|UPF0182 protein AF_1421|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LDVTILSPS 10
+DV ILSPS
Sbjct: 233 VDVNILSPS 241


>sp|Y1653_METJA|PUTATIVE ribosomal RNA large subunit|Methanocaldococcus jannaschii (strain

Query: 1 KLDVTILSP 9
K DV IL P
Sbjct: 284 KFDVVILDP 292


>sp|Y1649_METJA|PUTATIVE ribosomal RNA large subunit|Methanocaldococcus jannaschii (strain

Query: 1 KLDVTILSP 9
K DV IL P
Sbjct: 285 KFDVVILDP 293


>sp|DHE3_PYRHR|GLUTAMATE dehydrogenase|Pyrococcus horikoshii

Query: 1 KLDVTILSPS 10
+LDV +L+P+
Sbjct: 287 ELDVDVLAPA 296


>sp|DHE3_PYRHO|GLUTAMATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KLDVTILSPS 10
+LDV +L+P+
Sbjct: 287 ELDVDVLAPA 296


>sp|OTC_HALWD|ORNITHINE carbamoyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 LDVTILSPS 10
LD+T+++PS
Sbjct: 173 LDLTVVTPS 181


>sp|HEM3_IGNH4|PROBABLE porphobilinogen deaminase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 KLDVTILSPS 10
+L T+LSPS
Sbjct: 256 RLRATVLSPS 265


>sp|NADK_AERPE|NAD kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 KLDVTILSP 9
+LDV +L+P
Sbjct: 192 RLDVIVLTP 200


>sp|Y441_NANEQ|PROTEIN NEQ441|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 KLDVTILSP 9
K +VT+L+P
Sbjct: 90 KFEVTVLTP 98




197|Sequence|981|990|ILSPSRKVVP

>sp|THIC_SACI6|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 PSRKVVP 10
PSRK+VP
Sbjct: 48 PSRKLVP 54


>sp|THIC_SACI3|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 PSRKVVP 10
PSRK+VP
Sbjct: 48 PSRKLVP 54


>sp|THIC_SACI2|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 PSRKVVP 10
PSRK+VP
Sbjct: 48 PSRKLVP 54


>sp|THIC2_SACS2|PHOSPHOMETHYLPYRIMIDINE synthase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 PSRKVVP 10
PSRK+VP
Sbjct: 48 PSRKLVP 54


>sp|THIC_SACI4|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 PSRKVVP 10
PSRK+VP
Sbjct: 48 PSRKLVP 54


>sp|THIC_SULAC|PHOSPHOMETHYLPYRIMIDINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 PSRKVVP 10
PS+K+VP
Sbjct: 48 PSKKLVP 54


>sp|THIC1_SACS2|PHOSPHOMETHYLPYRIMIDINE synthase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 PSRKVVP 10
PS+K+VP
Sbjct: 48 PSKKLVP 54


>sp|RS19_META3|SMALL ribosomal subunit protein uS19|Methanococcus aeolicus (strain ATCC

Query: 2 LSPSRKVV 9
+PSRKVV
Sbjct: 136 FAPSRKVV 143


>sp|LONH_THEAC|PUTATIVE lon protease homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 SPSRKVVP 10
SPS+ +VP
Sbjct: 220 SPSKTIVP 227


>sp|LONH_THEVO|PUTATIVE lon protease homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 3 SPSRKVVP 10
SPS+ +VP
Sbjct: 220 SPSKTIVP 227


>sp|AGL3_SULAC|UDP-SULFOQUINOVOSE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 SPSRKVVP 10
+P RKV+P
Sbjct: 335 NPERKVLP 342




198|Sequence|986|995|RKVVPCLVTP

>sp|Y1537_METJA|UNCHARACTERIZED protein MJ1537|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 PCLVTP 10
PCL+TP
Sbjct: 81 PCLLTP 86


>sp|KDXD_HALVD|PROBABLE 2-keto-3-deoxyxylonate dehydratase|Haloferax volcanii (strain ATCC

Query: 5 PCLVTP 10
PC+VTP
Sbjct: 192 PCVVTP 197


>sp|DAPA_METLZ|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 VVPCLVTP 10
V+P L+TP
Sbjct: 5 VIPALITP 12


>sp|PIMT_HYPBU|PROTEIN-L-ISOASPARTATE O-methyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 1 RKVVPCLVTP 10
R V PCL P
Sbjct: 215 RPVTPCLFVP 224


>sp|KPRS2_ARCFU|RIBOSE-PHOSPHATE pyrophosphokinase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KVVPCLVTP 10
K++PC +P
Sbjct: 2 KIIPCPSSP 10


>sp|CBID_METKA|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 4 VPCLVT 9
VPCLVT
Sbjct: 230 VPCLVT 235


>sp|DAPA_ARCFU|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VVPCLVTP 10
V+P +VTP
Sbjct: 5 VIPAMVTP 12


>sp|DAPA_METKA|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 VVPCLVTP 10
V+P L+TP
Sbjct: 8 VIPALITP 15


>sp|RIFK_METMJ|RIBOFLAVIN kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 KVVPCLV 8
+V+PCL+
Sbjct: 169 RVLPCLI 175


>sp|DAPA_METPE|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 VVPCLVTP 10
V+P +VTP
Sbjct: 5 VLPAIVTP 12


>sp|DAPA_METBU|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 3 VVPCLVTP 10
V+P L+TP
Sbjct: 5 VLPALITP 12


>sp|PYRC_METTH|DIHYDROOROTASE thermautotrophicus (strain ATCC 29096

Query: 1 RKVVPCLVTP 10
R+ V C VTP
Sbjct: 237 REYVTCEVTP 246




199|Sequence|991|1000|CLVTPVTGRE

>sp|SYL_METTH|LEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 CLVTPVTGRE 10
C+ PVTG+E
Sbjct: 276 CVENPVTGQE 285


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 PVTGRE 10
PVTGRE
Sbjct: 208 PVTGRE 213


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 CLVTPVTGRE 10
C+VTP T E
Sbjct: 401 CIVTPATTVE 410


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 VTPVTGRE 10
V P+TG+E
Sbjct: 280 VNPITGKE 287


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 VTPVTGRE 10
V P+TG+E
Sbjct: 279 VNPITGKE 286


>sp|RPA_METTH|REPLICATION factor A|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 TPVTGR 9
TPVTGR
Sbjct: 79 TPVTGR 84


>sp|THIM_PYRAB|HYDROXYETHYLTHIAZOLE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 CLVTPVTG 8
C+VT +TG
Sbjct: 195 CIVTAITG 202


>sp|Y1032_METJA|UNCHARACTERIZED protein MJ1032|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LVTPVTGRE 10
L TP+ GRE
Sbjct: 26 LNTPILGRE 34


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 3 VTPVTGRE 10
+ P+TG+E
Sbjct: 290 INPITGKE 297


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CLVTPVTGRE 10
C V +TG+E
Sbjct: 1445 CYVIKITGKE 1454


>sp|SYL1_SACS2|LEUCINE--TRNA ligase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 VTPVTGRE 10
+ P+TGR+
Sbjct: 285 INPITGRK 292


>sp|SUCD_METTH|SUCCINATE--COA ligase [ADP-forming] subunit alpha|Methanothermobacter

Query: 1 CLVTPVTGRE 10
CLV +TG++
Sbjct: 15 CLVQGITGKQ 24




200|Sequence|996|1005|VTGRENSTAK

>sp|PUS10_PYRAR|TRNA pseudouridine synthase Pus10|Pyrobaculum arsenaticum (strain DSM

Query: 1 VTGRENSTAK 10
V+GRE+S A+
Sbjct: 239 VSGREDSDAR 248


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 VTGREN 6
VTGREN
Sbjct: 209 VTGREN 214


>sp|LYSK_PYRFU|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrococcus furiosus

Query: 2 TGRENSTAK 10
TG+EN AK
Sbjct: 21 TGKENGVAK 29


>sp|NNR_METTH|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanothermobacter

Query: 3 GRENSTAK 10
GRE STA+
Sbjct: 340 GRETSTAR 347


>sp|SECD_METTH|PROTEIN-EXPORT membrane protein SecD|Methanothermobacter thermautotrophicus

Query: 1 VTGRENSTAK 10
+TG ENS A+
Sbjct: 192 ITGAENSKAE 201




201|Sequence|1001|1010|NSTAKFIPRE

>sp|PYRH_METS5|URIDYLATE kinase|Metallosphaera sedula (strain ATCC 51363

Query: 1 NSTAKFIPR 9
N AKF+PR
Sbjct: 150 NPNAKFLPR 158


>sp|BRIX_PYRFU|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrococcus furiosus

Query: 2 STAKFIPR 9
+T KF+PR
Sbjct: 130 TTGKFVPR 137


>sp|BRIX_PYRAB|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrococcus abyssi

Query: 2 STAKFIPR 9
+T KF+PR
Sbjct: 130 TTGKFVPR 137


>sp|BRIX_PYRHO|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrococcus horikoshii

Query: 2 STAKFIPR 9
+T KF+PR
Sbjct: 130 TTGKFVPR 137


>sp|GGR_METAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 NSTAKFIPR 9
N T KF PR
Sbjct: 228 NRTGKFKPR 236


>sp|MSRB_METTH|PEPTIDE methionine sulfoxide reductase MsrB|Methanothermobacter

Query: 1 NSTA-KFIPRE 10
NS A KFIPR+
Sbjct: 138 NSAALKFIPRD 148


>sp|SYFA_METJA|PHENYLALANINE--TRNA ligase alpha subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 NSTAKFIPRE 10
N KF+P+E
Sbjct: 25 NELEKFMPKE 34


>sp|MFNF_METJA|(4- jannaschii (strain ATCC 43067

Query: 1 NSTAKFI 7
N+TAKF+
Sbjct: 117 NATAKFV 123




202|Sequence|1006|1015|FIPREEGLYA

>sp|PDAD2_METMA|PYRUVOYL-DEPENDENT arginine decarboxylase 2|Methanosarcina mazei (strain ATCC

Query: 1 FIPREEGL 8
+PREEGL
Sbjct: 49 LVPREEGL 56


>sp|CBIA_METM7|COBYRINATE a,c-diamide synthase|Methanococcus maripaludis (strain C7 /

Query: 2 IPREEGL 8
IPR+EGL
Sbjct: 177 IPRDEGL 183


>sp|ENO_HALLT|ENOLASE lacusprofundi (strain ATCC 49239

Query: 2 IPREEGLYA 10
+PR EG+YA
Sbjct: 65 VPRLEGVYA 73


>sp|Y1650_METJA|UNCHARACTERIZED protein MJ1650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FIPREEGL 8
FIP++EGL
Sbjct: 208 FIPQKEGL 215


>sp|ALAXM_SACS2|ALANYL-TRNA editing protein AlaX-M|Saccharolobus solfataricus (strain ATCC

Query: 1 FIPREEGL 8
F+PREE L
Sbjct: 162 FLPREEAL 169


>sp|RL21_METJA|LARGE ribosomal subunit protein eL21|Methanocaldococcus jannaschii

Query: 3 PREEGLY 9
PRE GLY
Sbjct: 20 PRERGLY 26


>sp|Y1023_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 FIPREEGLY 9
++P E GLY
Sbjct: 69 YLPEERGLY 77


>sp|CBIA_METM5|COBYRINATE a,c-diamide synthase|Methanococcus maripaludis (strain C5 /

Query: 2 IPREEGL 8
IPR++GL
Sbjct: 177 IPRDDGL 183


>sp|KDPA_HALSA|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Halobacterium salinarum (strain

Query: 1 FIPREEGLY 9
F P E GLY
Sbjct: 56 FTPIENGLY 64


>sp|KDPA_HALS3|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Halobacterium salinarum (strain

Query: 1 FIPREEGLY 9
F P E GLY
Sbjct: 56 FTPIENGLY 64


>sp|RL2_DESA1|LARGE ribosomal subunit protein uL2|Desulfurococcus amylolyticus

Query: 1 FIPREEGLYA 10
++P EG+YA
Sbjct: 68 YVPAVEGMYA 77


>sp|FBPAP_CENSY|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Cenarchaeum symbiosum (strain A)

Query: 2 IPREEGLYA 10
+ +EEGLY
Sbjct: 80 VAKEEGLYG 88


>sp|GCSPB_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 4 REEGLY 9
REEGLY
Sbjct: 321 REEGLY 326


>sp|TOP6A_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FIPREEG 7
FIP E+G
Sbjct: 139 FIPEEDG 145


>sp|HYD1A_PYRFU|SULFHYDROGENASE 1 subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FIPREE 6
F+PREE
Sbjct: 86 FVPREE 91


>sp|GATD_THEKO|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermococcus kodakarensis (strain ATCC

Query: 2 IPREEGL 8
+PR+EGL
Sbjct: 87 LPRKEGL 93


>sp|RL2_HYPBU|LARGE ribosomal subunit protein uL2|Hyperthermus butylicus (strain DSM

Query: 1 FIPREEGLY 9
+IP EG+Y
Sbjct: 67 YIPAAEGMY 75


>sp|UVRC_HALMA|UVRABC system protein C|Haloarcula marismortui (strain ATCC 43049

Query: 2 IPREEGLY 9
+PRE G+Y
Sbjct: 13 LPREPGVY 20


>sp|RL2_IGNH4|LARGE ribosomal subunit protein uL2|Ignicoccus hospitalis (strain

Query: 1 FIPREEGLY 9
+IP EG+Y
Sbjct: 71 WIPAAEGMY 79


>sp|THI4_PYRAE|THIAMINE thiazole synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 FIPREEGLY 9
+ P E+GLY
Sbjct: 88 YKPAEDGLY 96




203|Sequence|1011|1020|EGLYAVDVTY

>sp|RS2_SULTO|SMALL ribosomal subunit protein uS2|Sulfurisphaera tokodaii (strain DSM

Query: 1 EGLYAVDV 8
EGLY +DV
Sbjct: 62 EGLYVLDV 69


>sp|TRUA_PYRAB|TRNA pseudouridine synthase A|Pyrococcus abyssi (strain GE5 /

Query: 1 EGLYAVDVTY 10
EGL VD+ Y
Sbjct: 214 EGLLLVDIKY 223


>sp|RS2_SULAC|SMALL ribosomal subunit protein uS2|Sulfolobus acidocaldarius (strain

Query: 1 EGLYAVDV 8
EGLY +DV
Sbjct: 62 EGLYVLDV 69


>sp|RFCL_METBU|REPLICATION factor C large subunit|Methanococcoides burtonii (strain DSM 6242

Query: 1 EGLYAVDVTY 10
E YA DVT+
Sbjct: 387 ENEYAADVTF 396


>sp|RS2_METS5|SMALL ribosomal subunit protein uS2|Metallosphaera sedula (strain ATCC

Query: 1 EGLYAVDV 8
EGLY +DV
Sbjct: 62 EGLYVLDV 69


>sp|RS2_SACS2|SMALL ribosomal subunit protein uS2|Saccharolobus solfataricus (strain

Query: 1 EGLYAVDV 8
EGLY +DV
Sbjct: 68 EGLYVLDV 75


>sp|RL5_HALSA|LARGE ribosomal subunit protein uL5|Halobacterium salinarum (strain ATCC

Query: 2 GLYAVDVT 9
G+Y +DVT
Sbjct: 123 GIYGMDVT 130


>sp|RL5_HALS3|LARGE ribosomal subunit protein uL5|Halobacterium salinarum (strain ATCC

Query: 2 GLYAVDVT 9
G+Y +DVT
Sbjct: 123 GIYGMDVT 130


>sp|RL5_HALWD|LARGE ribosomal subunit protein uL5|Haloquadratum walsbyi (strain DSM

Query: 2 GLYAVDVT 9
G+Y +DVT
Sbjct: 122 GIYGLDVT 129


>sp|RS2_METVS|SMALL ribosomal subunit protein uS2|Methanococcus vannielii (strain

Query: 1 EGLYAVDV 8
+GLY +DV
Sbjct: 39 DGLYVLDV 46


>sp|RL5_NATPD|LARGE ribosomal subunit protein uL5|Natronomonas pharaonis (strain ATCC

Query: 2 GLYAVDVT 9
G+Y +DVT
Sbjct: 124 GIYGLDVT 131


>sp|RL5_HALMA|LARGE ribosomal subunit protein uL5|Haloarcula marismortui (strain ATCC

Query: 2 GLYAVDVT 9
G+Y +DVT
Sbjct: 125 GIYGLDVT 132


>sp|RL5_HALMT|LARGE ribosomal subunit protein uL5|Haloferax mediterranei (strain ATCC

Query: 2 GLYAVDVT 9
G+Y +DVT
Sbjct: 120 GIYGLDVT 127


>sp|RL5_HALVD|LARGE ribosomal subunit protein uL5|Haloferax volcanii (strain ATCC 29605

Query: 2 GLYAVDVT 9
G+Y +DVT
Sbjct: 120 GIYGLDVT 127


>sp|RS2_META3|SMALL ribosomal subunit protein uS2|Methanococcus aeolicus (strain ATCC

Query: 1 EGLYAVDV 8
+GLY +DV
Sbjct: 39 DGLYVLDV 46


>sp|FAU1_SULAC|PROBABLE ribonuclease FAU-1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GLYAVDVTY 10
G+YA +TY
Sbjct: 7 GIYATALTY 15


>sp|RS2_PYRHO|SMALL ribosomal subunit protein uS2|Pyrococcus horikoshii (strain ATCC

Query: 1 EGLYAVDV 8
+GLY +DV
Sbjct: 38 DGLYVLDV 45


>sp|RS2_PYRAB|SMALL ribosomal subunit protein uS2|Pyrococcus abyssi (strain GE5 /

Query: 1 EGLYAVDV 8
+GLY +DV
Sbjct: 38 DGLYVLDV 45




204|Sequence|1016|1025|VDVTYDGHPV

>sp|FRHA_METBF|COENZYME F420 hydrogenase subunit alpha|Methanosarcina barkeri (strain

Query: 4 TYDGHPV 10
TYDG PV
Sbjct: 303 TYDGQPV 309


>sp|RPO1C_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermoplasma volcanium (strain ATCC

Query: 1 VDVTYDGHP 9
VD+ Y G+P
Sbjct: 496 VDIIYKGYP 504


>sp|RPO1C_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermoplasma acidophilum (strain ATCC

Query: 1 VDVTYDGHP 9
VD+ Y G+P
Sbjct: 496 VDIIYKGYP 504


>sp|SODF_ACIAM|SUPEROXIDE dismutase [Fe]|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 VDVTYDGH 8
+DV Y+GH
Sbjct: 31 IDVHYNGH 38


>sp|GSA_PYRAE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 TYDGHPV 10
TY+ HPV
Sbjct: 290 TYNAHPV 296


>sp|DTDA_THEGJ|D-AMINOACYL-TRNA deacylase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 DVTYDGHPV 10
D +DG+PV
Sbjct: 30 DALFDGNPV 38


>sp|GSA_PYRAR|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 TYDGHPV 10
TY+ HPV
Sbjct: 290 TYNAHPV 296


>sp|ARGJ_METKA|GLUTAMATE N-acetyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 3 VTYDGHPV 10
VTY+G PV
Sbjct: 331 VTYEGGPV 338


>sp|AMPPA_PYRFU|AMP phosphorylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VDVTYDGHPV 10
V +TY G P+
Sbjct: 315 VAITYGGQPI 324


>sp|SODF_SACS2|SUPEROXIDE dismutase [Fe]|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VDVTYDGH 8
+DV Y+GH
Sbjct: 31 IDVHYNGH 38


>sp|AMPPA_PYRHO|AMP phosphorylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VDVTYDGHPV 10
V +TY G P+
Sbjct: 315 VAITYGGQPI 324


>sp|HYPF_METJA|PROBABLE carbamoyltransferase HypF|Methanocaldococcus jannaschii (strain

Query: 4 TYDGHP 9
TYDG P
Sbjct: 631 TYDGEP 636


>sp|AROC_METKA|CHORISMATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 VTYDGHPV 10
+ +DGHPV
Sbjct: 272 IWWDGHPV 279


>sp|AMPPA_THEON|AMP phosphorylase|Thermococcus onnurineus (strain NA1)

Query: 1 VDVTYDGHPV 10
V +TY G P+
Sbjct: 315 VAITYGGQPI 324


>sp|THIM1_METST|HYDROXYETHYLTHIAZOLE kinase 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 VDVTYDGHPV 10
+D+ DGH V
Sbjct: 186 IDIISDGHDV 195


>sp|HEM3_METBF|PROBABLE porphobilinogen deaminase|Methanosarcina barkeri (strain Fusaro /

Query: 3 VTYDGHPV 10
+TYDG P+
Sbjct: 103 LTYDGTPL 110


>sp|HEM3_METMA|PROBABLE porphobilinogen deaminase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 VTYDGHPV 10
+TYDG P+
Sbjct: 103 LTYDGTPL 110


>sp|SODF_SULAC|SUPEROXIDE dismutase [Fe]|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VDVTYDGH 8
+DV Y+GH
Sbjct: 31 IDVHYNGH 38


>sp|AMPPA_PYRAB|AMP phosphorylase|Pyrococcus abyssi (strain GE5 /

Query: 1 VDVTYDGHPV 10
V +TY G P+
Sbjct: 315 VAITYGGQPI 324


>sp|AMPPA_THEGJ|AMP phosphorylase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 VDVTYDGHPV 10
V +TY G P+
Sbjct: 315 VAITYGGQPI 324


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VDVTYDG 7
+DV YDG
Sbjct: 1069 IDVIYDG 1075


>sp|AMPPA_THEKO|AMP phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VDVTYDGHPV 10
V +TY G P+
Sbjct: 315 VAITYGGQPI 324


>sp|SYFB_METBF|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina barkeri (strain Fusaro /

Query: 2 DVTYDGHPV 10
DVTY HP+
Sbjct: 401 DVTYVLHPI 409


>sp|GSA_PYRNV|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 TYDGHPV 10
TY+ HPV
Sbjct: 290 TYNAHPV 296


>sp|GSA_PYRIL|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 TYDGHPV 10
TY+ HPV
Sbjct: 290 TYNAHPV 296


>sp|AMPP1_ARCFU|AMP phosphorylase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VTYDGHPV 10
+TY G PV
Sbjct: 318 ITYGGQPV 325


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VDVTYDG 7
+DV YDG
Sbjct: 1480 IDVLYDG 1486


>sp|RNP2_NATPD|RIBONUCLEASE P protein component 2|Natronomonas pharaonis (strain ATCC 35678

Query: 4 TYDGHPV 10
T DGHP+
Sbjct: 89 TVDGHPL 95


>sp|KPRS_HALSA|RIBOSE-PHOSPHATE pyrophosphokinase|Halobacterium salinarum (strain ATCC 700922

Query: 2 DVTYDGHP 9
DVTYD P
Sbjct: 25 DVTYDSFP 32


>sp|KPRS_HALS3|RIBOSE-PHOSPHATE pyrophosphokinase|Halobacterium salinarum (strain ATCC 29341

Query: 2 DVTYDGHP 9
DVTYD P
Sbjct: 25 DVTYDSFP 32


>sp|AROA_AERPE|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 VDVTYDGHP 9
VDV DG P
Sbjct: 296 VDVDLDGSP 304


>sp|SYFB_METMA|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DVTYDGHPV 10
DVTY HP+
Sbjct: 401 DVTYVLHPI 409


>sp|SYFB_METAC|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DVTYDGHPV 10
DVTY HP+
Sbjct: 401 DVTYVLHPI 409


>sp|TRUD_METKA|PROBABLE tRNA pseudouridine synthase D|Methanopyrus kandleri (strain AV19 /

Query: 2 DVTYDGHP 9
DVT DG P
Sbjct: 297 DVTQDGLP 304


>sp|AMPPA_METJA|AMP phosphorylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VTYDGHPV 10
+TY G P+
Sbjct: 317 ITYGGQPI 324


>sp|TRPF_NATPD|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 TYDGH 8
TYDGH
Sbjct: 115 TYDGH 119


>sp|TTH_ACIAM|TETRATHIONATE hydrolase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 DVTYDGHP 9
+V YDG+P
Sbjct: 419 NVVYDGNP 426


>sp|APGM_METMJ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanoculleus marisnigri (strain ATCC

Query: 6 DGHPV 10
DGHPV
Sbjct: 207 DGHPV 211


>sp|DPOL_THEFM|DNA polymerase|Thermococcus fumicolans

Query: 2 DVTYDGH 8
++TYDG+
Sbjct: 1262 EITYDGY 1268


>sp|ASSY_METKA|ARGININOSUCCINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 DVTYDGHPV 10
+ TY+G+P+
Sbjct: 79 NATYEGYPL 87


>sp|APGM_METVS|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus vannielii (strain ATCC 35089

Query: 6 DGHPV 10
DGHPV
Sbjct: 199 DGHPV 203


>sp|AMPPA_THESM|AMP phosphorylase|Thermococcus sibiricus (strain DSM 12597

Query: 3 VTYDGHPV 10
+TY G P+
Sbjct: 317 ITYGGQPI 324


>sp|MAAL_HALMA|METHYLASPARTATE ammonia-lyase|Haloarcula marismortui (strain ATCC 43049

Query: 4 TYDGHPV 10
YDG PV
Sbjct: 33 AYDGQPV 39


>sp|Y1066_METJA|UNCHARACTERIZED protein MJ1066|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VDVTYDGHP 9
+ V Y GHP
Sbjct: 128 IPVHYAGHP 136


>sp|DNAJ_HALSA|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 700922

Query: 1 VDVTYDGHP 9
VDVT + HP
Sbjct: 271 VDVTVEEHP 279


>sp|DNAJ_HALS3|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 29341

Query: 1 VDVTYDGHP 9
VDVT + HP
Sbjct: 271 VDVTVEEHP 279


>sp|TREH_THEVO|TREHALASE volcanium (strain ATCC 51530

Query: 2 DVTYDGHP 9
D+T +G+P
Sbjct: 21 DITVEGYP 28


>sp|MUTS2_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 1 VDVTYDGHPV 10
+DVT HPV
Sbjct: 605 IDVTAGRHPV 614


>sp|ADEC_METKA|ADENINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 1 VDVTYDGHPV 10
VD+ DG PV
Sbjct: 589 VDIITDGDPV 598


>sp|F16A1_HALMA|FRUCTOSE-1,6-BISPHOSPHATASE class 1 1|Haloarcula marismortui (strain ATCC 43049

Query: 3 VTYDGHPV 10
V ++GHP+
Sbjct: 236 VQFEGHPM 243




205|Sequence|1021|1030|DGHPVPGSPY

>sp|MTMB_METMA|MONOMETHYLAMINE methyltransferase MtmB|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 PVPGSPY 10
P+PGSPY
Sbjct: 169 PIPGSPY 175


>sp|RAD50_HALVD|DNA double-strand break repair Rad50|Haloferax volcanii (strain ATCC

Query: 2 GHPVPGSPY 10
G PV GSP+
Sbjct: 458 GQPVEGSPH 466


>sp|BIOD_NITMS|ATP-DEPENDENT dethiobiotin synthetase BioD|Nitrosopumilus maritimus (strain

Query: 4 PVPGSPY 10
P+P SPY
Sbjct: 76 PIPASPY 82


>sp|MTMB3_METBF|MONOMETHYLAMINE methyltransferase MtmB3|Methanosarcina barkeri (strain Fusaro /

Query: 4 PVPGSPY 10
PVP SPY
Sbjct: 169 PVPKSPY 175


>sp|SYR_PYRFU|ARGININE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DGHPVPG 7
DG P+PG
Sbjct: 365 DGEPIPG 371


>sp|MTMB2_METBF|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri (strain Fusaro /

Query: 4 PVPGSPY 10
PVP SPY
Sbjct: 169 PVPKSPY 175


>sp|MTMB1_METBF|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri (strain Fusaro /

Query: 4 PVPGSPY 10
PVP SPY
Sbjct: 169 PVPKSPY 175


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DGHPVPGSP 9
DG P P SP
Sbjct: 42 DGPPYPSSP 50


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DGHPVPGSP 9
DG P P SP
Sbjct: 42 DGPPYPSSP 50


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 DGHPVPGSP 9
DG P P SP
Sbjct: 45 DGPPYPSSP 53


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 DGHPVPGSP 9
DG P P SP
Sbjct: 45 DGPPYPSSP 53


>sp|MTMB2_METAC|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina acetivorans (strain ATCC

Query: 4 PVPGSPY 10
PVP SPY
Sbjct: 169 PVPKSPY 175


>sp|RAMA_METBA|[CO(II) methylated amine-specific corrinoid protein]|Methanosarcina

Query: 2 GHPVPG 7
GHP+PG
Sbjct: 33 GHPLPG 38


>sp|MTMB1_METAC|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina acetivorans (strain ATCC

Query: 4 PVPGSPY 10
PVP SPY
Sbjct: 169 PVPKSPY 175


>sp|AGLB_METJA|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GHPVPGSP 9
GHP+P P
Sbjct: 114 GHPLPWEP 121


>sp|Y2022_ARCFU|UNCHARACTERIZED protein AF_2022|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DGHPVPGSPY 10
D P P SPY
Sbjct: 88 DKEPTPISPY 97


>sp|MTMB2_METBA|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri

Query: 4 PVPGSPY 10
P+P SPY
Sbjct: 169 PIPKSPY 175


>sp|BIOB_NITMS|BIOTIN synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 4 PVPGSP 9
PVPG+P
Sbjct: 240 PVPGTP 245


>sp|MTMB1_METBA|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri

Query: 4 PVPGSPY 10
P+P SPY
Sbjct: 169 PIPKSPY 175


>sp|PURL_HALSA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halobacterium salinarum (strain ATCC 700922

Query: 1 DGHPVPGS 8
D HPVPGS
Sbjct: 539 DQHPVPGS 546


>sp|PURL_HALS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halobacterium salinarum (strain ATCC 29341

Query: 1 DGHPVPGS 8
D HPVPGS
Sbjct: 539 DQHPVPGS 546


>sp|Y419_ARCFU|UNCHARACTERIZED protein AF_0419|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 PVPGSP 9
P+PGSP
Sbjct: 13 PLPGSP 18


>sp|Y1062_PYRAB|UNCHARACTERIZED protein PYRAB10620|Pyrococcus abyssi (strain GE5 /

Query: 4 PVPGSP 9
P+PGSP
Sbjct: 16 PLPGSP 21


>sp|RAD50_HALSA|DNA double-strand break repair Rad50|Halobacterium salinarum (strain

Query: 2 GHPVPGSPY 10
G PV G+P+
Sbjct: 458 GQPVEGAPH 466


>sp|UPPS_PICTO|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Picrophilus

Query: 3 HPVPG 7
HPVPG
Sbjct: 23 HPVPG 27


>sp|PDXS_DESA1|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Desulfurococcus amylolyticus

Query: 1 DGHPVPG 7
+G+PVPG
Sbjct: 30 EGYPVPG 36


>sp|SLAA_SACS2|S-LAYER protein A|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GHPVPGSP 9
G PVPG+P
Sbjct: 1157 GTPVPGTP 1164


>sp|Y860_PYRFU|UNCHARACTERIZED protein PF0860|Pyrococcus furiosus (strain ATCC 43587

Query: 4 PVPGSP 9
P+PGSP
Sbjct: 19 PLPGSP 24


>sp|Y1209_PYRHO|UNCHARACTERIZED protein PH1209|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 PVPGSP 9
P+PGSP
Sbjct: 16 PLPGSP 21


>sp|KAE1B_METJA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 4 PVPGSPY 10
P PG PY
Sbjct: 168 PHPGGPY 174


>sp|Y522_METJA|UNCHARACTERIZED protein MJ0522|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 PGSPY 10
PGSPY
Sbjct: 192 PGSPY 196


>sp|SYFA_METLZ|PHENYLALANINE--TRNA ligase alpha subunit|Methanocorpusculum labreanum (strain ATCC

Query: 3 HPVPGSP 9
+PVPG+P
Sbjct: 134 NPVPGTP 140


>sp|GCK_PYRHO|GLYCERATE 2-kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GHPVP 6
GHP+P
Sbjct: 97 GHPIP 101


>sp|AROB_PYRNV|3-DEHYDROQUINATE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 PVPGSP 9
P+PG+P
Sbjct: 41 PIPGAP 46


>sp|AROB_PYRIL|3-DEHYDROQUINATE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 PVPGSP 9
P+PG+P
Sbjct: 41 PIPGAP 46


>sp|CIMA_SULAC|(R)-CITRAMALATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 HPVPGSPY 10
HP P PY
Sbjct: 285 HPNPYQPY 292


>sp|SYFB_THESM|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus sibiricus (strain DSM 12597

Query: 2 GHPVPGSPY 10
GH + G PY
Sbjct: 191 GHLIKGRPY 199


>sp|WECC_PYRHO|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GHPVPGSPY 10
GH +P PY
Sbjct: 256 GHCLPKDPY 264


>sp|Y688_THEON|UPF0284 protein TON_0688|Thermococcus onnurineus (strain NA1)

Query: 1 DGHPVPG 7
DGHP P
Sbjct: 57 DGHPTPA 63


>sp|MCRG_METBF|METHYL-COENZYME M reductase subunit gamma|Methanosarcina barkeri (strain Fusaro /

Query: 2 GHPVPGSPY 10
GH PGS Y
Sbjct: 42 GHRAPGSDY 50


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 1 DGHPVPGSPY 10
+ HP+ SPY
Sbjct: 426 NNHPLAPSPY 435


>sp|Y253_METJA|PUTATIVE hydrogenase maturation protease MJ0253|Methanocaldococcus

Query: 1 DGHPVPGSPY 10
D H VP +P+
Sbjct: 94 DAHNVPLAPF 103


>sp|AMT2_METJA|AMMONIUM transporter Amt2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DGHPVP 6
DG PVP
Sbjct: 209 DGRPVP 214


>sp|HELS_HALSA|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 700922

Query: 2 GHPVPG 7
GHP PG
Sbjct: 747 GHPDPG 752


>sp|HELS_HALS3|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 29341

Query: 2 GHPVPG 7
GHP PG
Sbjct: 747 GHPDPG 752


>sp|DTDA_HYPBU|D-AMINOACYL-TRNA deacylase|Hyperthermus butylicus (strain DSM 5456

Query: 2 GHPVPGSPY 10
G+P P +PY
Sbjct: 89 GNPGPEAPY 97


>sp|SYP_NANEQ|PROLINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 DGHPVPGSP 9
D +PV G P
Sbjct: 24 DAYPVKGMP 32


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 DGHPVPGSPY 10
+ HP+ SPY
Sbjct: 422 NNHPLMPSPY 431


>sp|RNZ_THEAC|RIBONUCLEASE Z|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 HPVPGSPY 10
HPVP Y
Sbjct: 141 HPVPALSY 148


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 1 DGHPVPGSPY 10
+ HP+ SPY
Sbjct: 422 NNHPLMPSPY 431


>sp|AOCD_ARCFU|ORNITHINE cyclodeaminase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GHPVPG 7
G PVPG
Sbjct: 256 GRPVPG 261


>sp|RL7A_PYRCJ|LARGE ribosomal subunit protein eL8|Pyrobaculum calidifontis (strain

Query: 2 GHPVPGSPY 10
+P+PG P+
Sbjct: 12 ANPLPGKPF 20


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 DGHPVPGSPY 10
+ HP+ SPY
Sbjct: 422 NNHPLMPSPY 431


>sp|Y038_PYRAB|UPF0284 protein PYRAB00380|Pyrococcus abyssi (strain GE5 /

Query: 1 DGHPVPG 7
+GHP P
Sbjct: 57 EGHPTPA 63


>sp|RNZ_THEVO|RIBONUCLEASE Z|Thermoplasma volcanium (strain ATCC 51530

Query: 3 HPVPGSPY 10
HPVP Y
Sbjct: 141 HPVPALSY 148


>sp|AROC_HALMA|CHORISMATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 DGHPVP 6
DGHP P
Sbjct: 273 DGHPTP 278


>sp|GLNA1_METMA|GLUTAMINE synthetase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DGHPVPGSP 9
DG+P G P
Sbjct: 104 DGNPFKGDP 112


>sp|DNAK_CENSY|CHAPERONE protein DnaK|Cenarchaeum symbiosum (strain A)

Query: 1 DGHPVPG 7
DG P PG
Sbjct: 647 DGQPKPG 653




206|Sequence|1026|1035|PGSPYTVEAS

>sp|HEM3_SACI7|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain

Query: 1 PGSPYTV 7
PG PYT+
Sbjct: 268 PGDPYTI 274


>sp|HEM3_SACI6|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 PGSPYTV 7
PG PYT+
Sbjct: 268 PGDPYTI 274


>sp|HEM3_SACI4|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain M.14.25

Query: 1 PGSPYTV 7
PG PYT+
Sbjct: 268 PGDPYTI 274


>sp|HEM3_SACI3|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain M.16.27)

Query: 1 PGSPYTV 7
PG PYT+
Sbjct: 268 PGDPYTI 274


>sp|HEM3_SACI2|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain L.S.2.15

Query: 1 PGSPYTV 7
PG PYT+
Sbjct: 268 PGDPYTI 274


>sp|HEM3_SACI1|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain

Query: 1 PGSPYTV 7
PG PYT+
Sbjct: 268 PGDPYTI 274


>sp|CYAS_METPE|CYSTEATE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 PGSPYTVEA 9
PG+PYT EA
Sbjct: 287 PGTPYTEEA 295


>sp|RNJ_METJA|RIBONUCLEASE J|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GSPYTVE 8
G+PYT+E
Sbjct: 103 GTPYTIE 109


>sp|Y1289_ARCFU|PUTATIVE GTPase AF_1289|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PGSPYT 6
PGSP+T
Sbjct: 84 PGSPFT 89


>sp|MTMB_METMA|MONOMETHYLAMINE methyltransferase MtmB|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PGSPYTVEAS 10
PGSPY V A+
Sbjct: 171 PGSPYEVLAA 180


>sp|METK_ARCFU|S-ADENOSYLMETHIONINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PGSPYTVEAS 10
PG P ++EAS
Sbjct: 293 PGRPMSMEAS 302


>sp|Y522_METJA|UNCHARACTERIZED protein MJ0522|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PGSPYTV 7
PGSPY +
Sbjct: 192 PGSPYIL 198


>sp|TIAS_ACIS3|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Acidilobus saccharovorans

Query: 1 PGSPYTVEAS 10
PG PYT E +
Sbjct: 158 PGEPYTFELT 167


>sp|RNJ_HALSA|RIBONUCLEASE J|Halobacterium salinarum (strain ATCC 700922

Query: 2 GSPYTVE 8
GSP+T+E
Sbjct: 103 GSPFTIE 109


>sp|SYP_METTH|PROLINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PGSPYTV 7
PGS YTV
Sbjct: 213 PGSEYTV 219


>sp|MUTL_METMJ|DNA mismatch repair protein MutL|Methanoculleus marisnigri (strain ATCC

Query: 1 PGSPYT 6
PG+PYT
Sbjct: 365 PGAPYT 370


>sp|DPOL1_SACS2|DNA polymerase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PGSPYTVE 8
PG PY V+
Sbjct: 170 PGMPYVVK 177


>sp|DPOL1_SULOH|DNA polymerase 1|Sulfurisphaera ohwakuensis

Query: 1 PGSPYTVE 8
PG PY V+
Sbjct: 170 PGLPYVVK 177


>sp|DNLI_METB6|DNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 PGSPYT 6
P SPYT
Sbjct: 396 PASPYT 401


>sp|ILVD_PICTO|DIHYDROXY-ACID dehydratase|Picrophilus torridus (strain ATCC 700027

Query: 1 PGSPYTV 7
PG PYT+
Sbjct: 305 PGGPYTM 311


>sp|CBSA_SACS2|CYTOCHROME b558/566 subunit A|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PGSPYTVEAS 10
PG+ YT+E +
Sbjct: 143 PGTTYTIEKN 152


>sp|ILVD_METKA|DIHYDROXY-ACID dehydratase|Methanopyrus kandleri (strain AV19 /

Query: 1 PGSPYTV 7
PG PYT+
Sbjct: 305 PGGPYTM 311


>sp|BIOD_NITMS|ATP-DEPENDENT dethiobiotin synthetase BioD|Nitrosopumilus maritimus (strain

Query: 1 PGSPYT 6
P SPYT
Sbjct: 78 PASPYT 83


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 GSPYTVEAS 10
G+PY V AS
Sbjct: 310 GTPYAVVAS 318


>sp|ASPD_METMA|L-ASPARTATE dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GSPYTVE 8
G+PY VE
Sbjct: 155 GAPYVVE 161


>sp|FEN_HALWD|FLAP endonuclease 1|Haloquadratum walsbyi (strain DSM 16790

Query: 2 GSPYTV 7
G+PYTV
Sbjct: 182 GAPYTV 187


>sp|ASPD_METAC|L-ASPARTATE dehydrogenase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GSPYTVE 8
G+PY VE
Sbjct: 155 GAPYVVE 161


>sp|SYP_METMJ|PROLINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PGSPYTVEAS 10
PG+ YT+ A
Sbjct: 207 PGADYTIAAD 216


>sp|TDXH2_THEAC|PEROXIREDOXIN 2|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GSPYTVEAS 10
G+P TV+AS
Sbjct: 173 GAPSTVDAS 181


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 GSPYTVEAS 10
G PY V AS
Sbjct: 309 GEPYAVVAS 317




207|Sequence|1031|1040|TVEASLPPDP

>sp|AATD_METS5|A-TYPE ATP synthase subunit D|Metallosphaera sedula (strain ATCC 51363

Query: 3 EASLPPDP 10
EAS+PP P
Sbjct: 110 EASIPPKP 117


>sp|Y1873_ARCFU|UNCHARACTERIZED protein AF_1873|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VEASLPPD 9
V+ SLPPD
Sbjct: 4 VKLSLPPD 11


>sp|Y408_ARCFU|UNCHARACTERIZED protein AF_0408|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VEASLPPDP 10
+E LP DP
Sbjct: 142 IEGELPEDP 150


>sp|FDHB1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 4 ASLPPDP 10
S+PPDP
Sbjct: 314 GSIPPDP 320


>sp|TRMY_ARCFU|TRNA (pseudouridine(54)-N(1))-methyltransferase|Archaeoglobus fulgidus

Query: 4 ASLPPDP 10
A LPP+P
Sbjct: 231 AQLPPNP 237


>sp|ARADH_HALVD|L-ARABINOSE 1-dehydrogenase (NAD(P)(+))|Haloferax volcanii (strain ATCC 29605

Query: 2 VEASLPPDP 10
VEASLP P
Sbjct: 210 VEASLPDSP 218


>sp|MUTS2_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 2 VEASLPPDP 10
+EA++ PDP
Sbjct: 435 IEAAIRPDP 443


>sp|Y245_SULTO|UPF0210 protein STK_02450|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 TVEASLPPDP 10
TV+ SL P P
Sbjct: 264 TVDLSLAPSP 273




208|Sequence|1036|1045|LPPDPSKVKA

>sp|RF1_THEON|PEPTIDE chain release factor subunit|Thermococcus onnurineus (strain NA1)

Query: 1 LPPDPSKVK 9
+PP+P KV+
Sbjct: 109 VPPEPLKVR 117


>sp|PDAD1_ARCFU|PYRUVOYL-DEPENDENT arginine decarboxylase 1|Archaeoglobus fulgidus (strain ATCC

Query: 1 LPPDPS 6
+PPDPS
Sbjct: 89 IPPDPS 94


>sp|TRPD_METS5|ANTHRANILATE phosphoribosyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 4 DPSKVKA 10
DPSK+KA
Sbjct: 332 DPSKIKA 338


>sp|KPRS_SULTO|RIBOSE-PHOSPHATE pyrophosphokinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LPPDPSKV 8
+P DPSKV
Sbjct: 271 IPQDPSKV 278


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 PDPSKV 8
PDPSK+
Sbjct: 884 PDPSKI 889


>sp|RPO1N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 2 PPDPSKVKA 10
PPDP + +A
Sbjct: 516 PPDPQEGRA 524


>sp|NCPP_CALMQ|PROBABLE inosine/xanthosine triphosphatase|Caldivirga maquilingensis

Query: 4 DPSKVKA 10
+PSKVKA
Sbjct: 9 NPSKVKA 15


>sp|GLNA_SULAC|GLUTAMINE synthetase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PPDPS 6
PPDPS
Sbjct: 365 PPDPS 369


>sp|CARA_ARCFU|CARBAMOYL phosphate synthase small chain|Archaeoglobus fulgidus (strain ATCC

Query: 2 PPDPSKVK 9
P DP++VK
Sbjct: 223 PGDPARVK 230


>sp|GLYA_THEAC|SERINE hydroxymethyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 4 DPSKVKA 10
DP K+KA
Sbjct: 392 DPEKIKA 398


>sp|TRPF_PYRIL|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 DPSKVKA 10
DP KVKA
Sbjct: 193 DPGKVKA 199


>sp|EF2_AERPE|ELONGATION factor 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 LPPDPSKV 8
LPP P K+
Sbjct: 723 LPPSPPKI 730


>sp|MTAP_HYPBU|S-METHYL-5'-THIOADENOSINE phosphorylase|Hyperthermus butylicus (strain DSM 5456

Query: 1 LPPDPSKVK 9
LPP+P K +
Sbjct: 254 LPPEPDKAR 262




209|Sequence|1041|1050|SKVKAHGPGL

>sp|HEM3_HALSA|PROBABLE porphobilinogen deaminase|Halobacterium salinarum (strain ATCC

Query: 1 SKVKAHGPGL 10
++V+AH PGL
Sbjct: 132 AQVQAHRPGL 141


>sp|RS17_METST|SMALL ribosomal subunit protein uS17|Methanosphaera stadtmanae (strain

Query: 1 SKVKAHGP 8
SK+KAH P
Sbjct: 65 SKIKAHKP 72


>sp|RS17_METTH|SMALL ribosomal subunit protein uS17|Methanothermobacter

Query: 1 SKVKAHGP 8
SK+KAH P
Sbjct: 65 SKIKAHKP 72


>sp|CETZ1_HALVD|TUBULIN-LIKE protein CetZ1|Haloferax volcanii (strain ATCC 29605

Query: 1 SKVKAHGPG 9
S+VK HG G
Sbjct: 61 SRVKGHGVG 69


>sp|APGM_PICTO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Picrophilus torridus (strain ATCC 700027

Query: 6 HGPGL 10
HGPGL
Sbjct: 149 HGPGL 153


>sp|MOAC_SACS2|PROBABLE cyclic pyranopterin monophosphate synthase|Saccharolobus

Query: 1 SKVKAH 6
SKVKAH
Sbjct: 91 SKVKAH 96


>sp|WECC_PYRHO|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KVKAHGPGL 10
+VK H PG+
Sbjct: 244 RVKIHTPGI 252


>sp|SRP54_SACI1|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 SKVKAHGPGL 10
SKV H PGL
Sbjct: 346 SKVLQHIPGL 355


>sp|SRP54_SACI2|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 SKVKAHGPGL 10
SKV H PGL
Sbjct: 346 SKVLQHIPGL 355


>sp|RL6_IGNH4|LARGE ribosomal subunit protein uL6|Ignicoccus hospitalis (strain

Query: 1 SKVKAHGP 8
SKVK GP
Sbjct: 24 SKVKVRGP 31


>sp|SRP54_SACS2|SIGNAL recognition particle 54 kDa|Saccharolobus solfataricus (strain ATCC

Query: 1 SKVKAHGPGL 10
SKV H PGL
Sbjct: 346 SKVLQHIPGL 355


>sp|SRP54_SACI7|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 SKVKAHGPGL 10
SKV H PGL
Sbjct: 346 SKVLQHIPGL 355


>sp|SRP54_SACI6|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain M.16.4

Query: 1 SKVKAHGPGL 10
SKV H PGL
Sbjct: 346 SKVLQHIPGL 355


>sp|SRP54_SACI4|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 SKVKAHGPGL 10
SKV H PGL
Sbjct: 346 SKVLQHIPGL 355


>sp|SRP54_SACI3|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 SKVKAHGPGL 10
SKV H PGL
Sbjct: 346 SKVLQHIPGL 355


>sp|RS17_METBF|SMALL ribosomal subunit protein uS17|Methanosarcina barkeri (strain

Query: 1 SKVKAHGP 8
SKV AH P
Sbjct: 68 SKVHAHNP 75


>sp|LADH_METVS|LACTALDEHYDE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 1 SKVKAHGPGL 10
SKV+A GP L
Sbjct: 364 SKVEAFGPIL 373


>sp|AROC_METAR|CHORISMATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 4 KAHGPGL 10
++HGPGL
Sbjct: 17 ESHGPGL 23


>sp|RS17_METMA|SMALL ribosomal subunit protein uS17|Methanosarcina mazei (strain ATCC

Query: 1 SKVKAHGPG 9
SK+ AH P
Sbjct: 68 SKIHAHNPA 76


>sp|RS17_THEKO|SMALL ribosomal subunit protein uS17|Thermococcus kodakarensis (strain

Query: 1 SKVKAHGP 8
SKV AH P
Sbjct: 67 SKVHAHNP 74




210|Sequence|1046|1055|HGPGLEGGLV

>sp|AATA_SULAC|A-TYPE ATP synthase subunit A|Sulfolobus acidocaldarius (strain ATCC

Query: 2 GPGLEGGL 9
GPGL GG+
Sbjct: 77 GPGLMGGI 84


>sp|IF2P_METMA|PROBABLE translation initiation factor IF-2|Methanosarcina mazei (strain

Query: 2 GPGLEGGL 9
PGLEG L
Sbjct: 313 APGLEGAL 320


>sp|IF2P_METBF|PROBABLE translation initiation factor IF-2|Methanosarcina barkeri (strain

Query: 2 GPGLEGGL 9
PGLEG L
Sbjct: 313 APGLEGAL 320


>sp|RADB_THEAC|DNA repair and recombination protein|Thermoplasma acidophilum (strain

Query: 4 GLEGGLV 10
GLEGG++
Sbjct: 27 GLEGGII 33


>sp|GLYA_METBF|SERINE hydroxymethyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 3 PGLEGG 8
PGL+GG
Sbjct: 253 PGLQGG 258


>sp|CHEF1_HALS3|TAXIS protein CheF1|Halobacterium salinarum (strain ATCC 29341

Query: 3 PGLEGGLV 10
P +EGG+V
Sbjct: 118 PAVEGGVV 125


>sp|SRP54_HALMA|SIGNAL recognition particle 54 kDa|Haloarcula marismortui (strain ATCC

Query: 3 PGLEGGLV 10
PGL GGL+
Sbjct: 352 PGLGGGLM 359


>sp|SRP54_HALWD|SIGNAL recognition particle 54 kDa|Haloquadratum walsbyi (strain DSM 16790

Query: 3 PGLEGGL 9
PGL GGL
Sbjct: 351 PGLGGGL 357


>sp|IORA_THEKO|INDOLEPYRUVATE oxidoreductase subunit IorA|Thermococcus kodakarensis (strain ATCC

Query: 2 GPGLEGGLV 10
G G+EGG V
Sbjct: 107 GMGVEGGFV 115


>sp|PURL_METS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanobrevibacter smithii (strain ATCC

Query: 2 GPGLEGGLV 10
GPG + GLV
Sbjct: 57 GPGDDAGLV 65


>sp|NCPP_PYRAE|PROBABLE inosine/xanthosine triphosphatase|Pyrobaculum aerophilum (strain

Query: 1 HGPGLEGGLV 10
HG G+E G+V
Sbjct: 68 HGVGIEAGVV 77


>sp|NCPP_PYRCJ|PROBABLE inosine/xanthosine triphosphatase|Pyrobaculum calidifontis

Query: 1 HGPGLEGGLV 10
HG G+E G+V
Sbjct: 68 HGVGIEAGVV 77


>sp|TRUD_THEON|PROBABLE tRNA pseudouridine synthase D|Thermococcus onnurineus (strain NA1)

Query: 1 HGPGLEG 7
HG G+EG
Sbjct: 198 HGGGMEG 204


>sp|DNLI_ACIAM|DNA ligase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 HGPGLEGG 8
HG G +GG
Sbjct: 456 HGKGRKGG 463


>sp|NCPP_THEKO|PROBABLE inosine/xanthosine triphosphatase|Thermococcus kodakarensis (strain

Query: 1 HGPGLE 6
HGPG E
Sbjct: 104 HGPGFE 109




211|Sequence|1051|1060|EGGLVGKPAE

>sp|FRHA_METVO|COENZYME F420 hydrogenase subunit alpha|Methanococcus voltae

Query: 1 EGGLVGKPAE 10
E LVGKPAE
Sbjct: 44 EKFLVGKPAE 53


>sp|PYRD_HALMA|DIHYDROOROTATE dehydrogenase (quinone)|Haloarcula marismortui (strain ATCC 43049

Query: 2 GGLVGKPAE 10
GGL GKP E
Sbjct: 260 GGLSGKPIE 268


>sp|Y1332_METJA|UNCHARACTERIZED GTP-binding protein MJ1332|Methanocaldococcus jannaschii (strain

Query: 3 GLVGKP 8
GLVGKP
Sbjct: 5 GLVGKP 10


>sp|PSB1_CENSY|PROTEASOME subunit beta 1|Cenarchaeum symbiosum (strain A)

Query: 2 GGLVGKPA 9
GG+VG+PA
Sbjct: 105 GGVVGEPA 112


>sp|AROE_METVS|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus vannielii (strain ATCC

Query: 3 GLVGKPAE 10
GL+G P E
Sbjct: 10 GLIGHPVE 17


>sp|AROE_META3|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus aeolicus (strain ATCC

Query: 3 GLVGKPAE 10
GL+G P E
Sbjct: 10 GLIGHPVE 17


>sp|SYM_METS5|METHIONINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 2 GGLVGKPA 9
G +VGKPA
Sbjct: 527 GHVVGKPA 534


>sp|DNAK_HALSA|CHAPERONE protein DnaK|Halobacterium salinarum (strain ATCC 700922

Query: 4 LVGKPA 9
LVGKPA
Sbjct: 50 LVGKPA 55


>sp|DNAK_HALS3|CHAPERONE protein DnaK|Halobacterium salinarum (strain ATCC 29341

Query: 4 LVGKPA 9
LVGKPA
Sbjct: 50 LVGKPA 55


>sp|DNAK_HALWD|CHAPERONE protein DnaK|Haloquadratum walsbyi (strain DSM 16790

Query: 1 EGGLVGKPA 9
E LVGKPA
Sbjct: 48 EERLVGKPA 56


>sp|DNAK_HALLT|CHAPERONE protein DnaK|Halorubrum lacusprofundi (strain ATCC 49239

Query: 4 LVGKPA 9
LVGKPA
Sbjct: 51 LVGKPA 56


>sp|DNAK_NATPD|CHAPERONE protein DnaK|Natronomonas pharaonis (strain ATCC 35678

Query: 4 LVGKPA 9
LVGKPA
Sbjct: 51 LVGKPA 56


>sp|DNAK_HALMA|CHAPERONE protein DnaK|Haloarcula marismortui (strain ATCC 43049

Query: 4 LVGKPA 9
LVGKPA
Sbjct: 50 LVGKPA 55


>sp|TRPG_HALSA|ANTHRANILATE synthase component 2|Halobacterium salinarum (strain ATCC 700922

Query: 2 GGLVGKPAE 10
GG VG+ AE
Sbjct: 98 GGTVGRAAE 106


>sp|DNAK_HALMT|CHAPERONE protein DnaK|Haloferax mediterranei (strain ATCC 33500

Query: 4 LVGKPA 9
LVGKPA
Sbjct: 51 LVGKPA 56


>sp|AROE_HALWD|SHIKIMATE dehydrogenase (NADP(+))|Haloquadratum walsbyi (strain DSM 16790

Query: 3 GLVGKPAE 10
GL+G P E
Sbjct: 5 GLIGNPVE 12


>sp|LYSZ_PYRAE|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrobaculum aerophilum

Query: 1 EGGLVGKPAE 10
+GG VGK AE
Sbjct: 126 DGGYVGKIAE 135


>sp|THTR_HALVD|PUTATIVE thiosulfate sulfurtransferase|Haloferax volcanii (strain ATCC 29605

Query: 2 GGLVGKPAE 10
G LVG P E
Sbjct: 275 GNLVGAPVE 283


>sp|AROE_METS3|SHIKIMATE dehydrogenase (NADP(+))|Methanobrevibacter smithii (strain ATCC

Query: 3 GLVGKPAE 10
GL+G P E
Sbjct: 10 GLIGHPVE 17


>sp|ASSY_METST|ARGININOSUCCINATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 EGGLVGKPA 9
EGGL+ PA
Sbjct: 181 EGGLLENPA 189


>sp|IF2G_AERPE|TRANSLATION initiation factor 2 subunit|Aeropyrum pernix (strain ATCC 700893

Query: 2 GGLVGKPAE 10
G +VGKP E
Sbjct: 314 GNVVGKPGE 322


>sp|DPHB_THEGJ|DIPHTHINE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 GLVGKP 8
GL+GKP
Sbjct: 49 GLIGKP 54


>sp|AROE_METM6|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus maripaludis (strain C6 /

Query: 3 GLVGKPAE 10
GL+G P E
Sbjct: 10 GLIGHPVE 17


>sp|AROE_PYRAB|SHIKIMATE dehydrogenase (NADP(+))|Pyrococcus abyssi (strain GE5 /

Query: 3 GLVGKPA 9
GL+GKP
Sbjct: 5 GLIGKPV 11




212|Sequence|1056|1065|GKPAEFTIDT

>sp|RS3_METTP|SMALL ribosomal subunit protein uS3|Methanothrix thermoacetophila (strain

Query: 1 GKPAEFTIDT 10
GKPAE +DT
Sbjct: 155 GKPAEEIVDT 164


>sp|COFE_ARCFU|COENZYME F420:L-glutamate ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GKPAEF 6
GKPAEF
Sbjct: 70 GKPAEF 75


>sp|Y993_METM6|UPF0179 protein MmarC6_0993|Methanococcus maripaludis (strain C6 /

Query: 3 PAEFTI 8
PAEFTI
Sbjct: 72 PAEFTI 77


>sp|Y979_METVS|UPF0179 protein Mevan_0979|Methanococcus vannielii (strain ATCC 35089

Query: 3 PAEFTI 8
PAEFTI
Sbjct: 72 PAEFTI 77


>sp|Y952_METM7|UPF0179 protein MmarC7_0952|Methanococcus maripaludis (strain C7 /

Query: 3 PAEFTI 8
PAEFTI
Sbjct: 72 PAEFTI 77


>sp|Y1728_METM5|UPF0179 protein MmarC5_1728|Methanococcus maripaludis (strain C5 /

Query: 3 PAEFTI 8
PAEFTI
Sbjct: 72 PAEFTI 77


>sp|Y1679_METMP|UPF0179 protein MMP1679|Methanococcus maripaludis (strain DSM 14266

Query: 3 PAEFTI 8
PAEFTI
Sbjct: 72 PAEFTI 77


>sp|FRHA_METJA|COENZYME F420 hydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 1 GKPAEF 6
GKPAEF
Sbjct: 54 GKPAEF 59


>sp|FRHA_METVO|COENZYME F420 hydrogenase subunit alpha|Methanococcus voltae

Query: 1 GKPAEF 6
GKPAEF
Sbjct: 49 GKPAEF 54


>sp|IF6_METMJ|TRANSLATION initiation factor 6|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GKPAEFT 7
G PAEFT
Sbjct: 29 GAPAEFT 35


>sp|PSB1_CENSY|PROTEASOME subunit beta 1|Cenarchaeum symbiosum (strain A)

Query: 1 GKPAEFTIDT 10
G+PA +T+D+
Sbjct: 109 GEPAIYTLDS 118


>sp|Y3388_METAC|UNCHARACTERIZED serpin-like protein MA_3388|Methanosarcina acetivorans (strain ATCC

Query: 1 GKPAEFTID 9
KP EFT D
Sbjct: 388 AKPKEFTAD 396


>sp|RIBL_PYRFU|FAD synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GKPAEFTID 9
G+P E +ID
Sbjct: 77 GEPGEISID 85


>sp|AROA_PYRAB|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 GKPAEFTIDT 10
GKP FT+++
Sbjct: 354 GKPRGFTVES 363


>sp|FTR_METFV|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanothermus fervidus (strain ATCC 43054

Query: 1 GKPAEFTIDT 10
G PAE IDT
Sbjct: 49 GCPAEAGIDT 58




213|Sequence|1061|1070|FTIDTKGAGT

>sp|ATGT_METTH|TRNA-GUANINE(15) transglycosylase|Methanothermobacter thermautotrophicus (strain

Query: 2 TIDTKGAG 9
TID KG G
Sbjct: 45 TIDVKGPG 52


>sp|IF2P_HALSA|PROBABLE translation initiation factor IF-2|Halobacterium salinarum (strain

Query: 2 TIDTKGAGT 10
TID GAGT
Sbjct: 235 TIDGPGAGT 243


>sp|IF2P_HALS3|PROBABLE translation initiation factor IF-2|Halobacterium salinarum (strain

Query: 2 TIDTKGAGT 10
TID GAGT
Sbjct: 235 TIDGPGAGT 243




214|Sequence|1066|1075|KGAGTGGLGL

>sp|CATA_METBF|CATALASE barkeri (strain Fusaro /

Query: 1 KGAGTGG 7
KGAG GG
Sbjct: 60 KGAGAGG 66


>sp|RSMA_HALWD|PROBABLE ribosomal RNA small subunit|Haloquadratum walsbyi (strain DSM

Query: 2 GAGTGGL 8
GAGTG L
Sbjct: 72 GAGTGAL 78


>sp|RSMA_HALSA|PROBABLE ribosomal RNA small subunit|Halobacterium salinarum (strain ATCC

Query: 2 GAGTGGL 8
GAGTG L
Sbjct: 51 GAGTGAL 57


>sp|RSMA_HALS3|PROBABLE ribosomal RNA small subunit|Halobacterium salinarum (strain ATCC

Query: 2 GAGTGGL 8
GAGTG L
Sbjct: 51 GAGTGAL 57


>sp|PUR2_METAR|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 KGAGTGGLG 9
+G TGG+G
Sbjct: 221 QGPNTGGMG 229


>sp|CBIT_METS3|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 2 GAGTGGL 8
G GTGG+
Sbjct: 41 GCGTGGI 47


>sp|Y2423_ARCFU|UNCHARACTERIZED protein AF_2423|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KGAGTGGL 8
KGA TGG+
Sbjct: 135 KGAKTGGV 142


>sp|COBS_SULTO|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 GTGGLGL 10
G GG+GL
Sbjct: 106 GAGGIGL 112


>sp|CYAS_METBU|CYSTEATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 GAGTGGL 8
G+GTGG+
Sbjct: 232 GSGTGGI 238


>sp|COBS_SACS2|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 GTGGLGL 10
G+GG+GL
Sbjct: 107 GSGGIGL 113




215|Sequence|1071|1080|GGLGLTVEGP

>sp|RL6_HALWD|LARGE ribosomal subunit protein uL6|Haloquadratum walsbyi (strain DSM

Query: 3 LGLTVEGP 10
L LTVEGP
Sbjct: 19 LALTVEGP 26


>sp|RL6_HALSA|LARGE ribosomal subunit protein uL6|Halobacterium salinarum (strain

Query: 3 LGLTVEGP 10
L LTVEGP
Sbjct: 19 LDLTVEGP 26


>sp|PFDA_METLZ|PREFOLDIN subunit alpha|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 GLGLTVEGP 10
G G+TVE P
Sbjct: 89 GAGITVEKP 97


>sp|Y474_KORCO|UPF0310 protein Kcr_0474|Korarchaeum cryptofilum (strain OPF8)

Query: 2 GLGLTVEGP 10
G+G +EGP
Sbjct: 49 GVGKEIEGP 57


>sp|RL11_METJA|LARGE ribosomal subunit protein uL11|Methanocaldococcus jannaschii

Query: 1 GGLGLTVEG 9
G +G+TVEG
Sbjct: 131 GSMGVTVEG 139


>sp|R15PI_HALTV|RIBOSE 1,5-bisphosphate isomerase|Haloterrigena turkmenica (strain ATCC

Query: 4 GLTVEGP 10
GLTVE P
Sbjct: 278 GLTVENP 284


>sp|Y1393_METJA|UNCHARACTERIZED protein MJ1393|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GGLGLTVEGP 10
GG+ T EGP
Sbjct: 296 GGVSATKEGP 305


>sp|RL11_METKA|LARGE ribosomal subunit protein uL11|Methanopyrus kandleri (strain AV19 /

Query: 1 GGLGLTVEG 9
G +G+TVEG
Sbjct: 131 GSMGVTVEG 139


>sp|GCSPA_STAMF|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Staphylothermus

Query: 2 GLGLTVEGP 10
GLGL GP
Sbjct: 279 GLGLNYGGP 287


>sp|Y3524_METAC|PUTATIVE HTH-type transcriptional regulatory protein|Methanosarcina

Query: 1 GGLGLTVEG 9
GGL +++EG
Sbjct: 121 GGLYISIEG 129


>sp|RS11_CALMQ|SMALL ribosomal subunit protein uS11|Caldivirga maquilingensis (strain

Query: 1 GGLGLTVEGP 10
GG GL V GP
Sbjct: 82 GGYGLKVPGP 91


>sp|IF2P_METHJ|PROBABLE translation initiation factor IF-2|Methanospirillum hungatei JF-1

Query: 2 GLGLTVEGP 10
L LTV+GP
Sbjct: 235 ALTLTVDGP 243


>sp|Y160_METLZ|PUTATIVE HTH-type transcriptional regulatory protein|Methanocorpusculum

Query: 1 GGLGLTVE 8
GG+G T+E
Sbjct: 162 GGMGTTLE 169


>sp|IF2P_METST|PROBABLE translation initiation factor IF-2|Methanosphaera stadtmanae

Query: 2 GLGLTVE 8
GLGLT++
Sbjct: 244 GLGLTID 250


>sp|RL6_METTH|LARGE ribosomal subunit protein uL6|Methanothermobacter

Query: 4 GLTVEGP 10
G+TV+GP
Sbjct: 24 GVTVKGP 30


>sp|Y620_METKA|UPF0425 pyridoxal phosphate-dependent protein MK0620|Methanopyrus kandleri

Query: 2 GLGLTVEGP 10
G G TV+GP
Sbjct: 232 GYGWTVDGP 240




216|Sequence|1076|1085|TVEGPCEAKI

>sp|DNAG_PYRFU|DNA primase DnaG|Pyrococcus furiosus (strain ATCC 43587

Query: 4 GPCEAKI 10
GPCEAKI
Sbjct: 125 GPCEAKI 131


>sp|DNAG_PYRHO|DNA primase DnaG|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 GPCEAKI 10
GPCEAKI
Sbjct: 125 GPCEAKI 131


>sp|DNAG_PYRAB|DNA primase DnaG|Pyrococcus abyssi (strain GE5 /

Query: 4 GPCEAKI 10
GPCEAKI
Sbjct: 125 GPCEAKI 131


>sp|DNAG_METS3|DNA primase DnaG|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 GPCEAKI 10
GPCEA+I
Sbjct: 99 GPCEAEI 105


>sp|DNAG_ARCFU|DNA primase DnaG|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GPCEAKI 10
GPC AKI
Sbjct: 107 GPCSAKI 113


>sp|DNAG_METBF|DNA primase DnaG|Methanosarcina barkeri (strain Fusaro /

Query: 4 GPCEAKI 10
GPC AKI
Sbjct: 96 GPCSAKI 102


>sp|DNAG_METMA|DNA primase DnaG|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 GPCEAKI 10
GPC AKI
Sbjct: 96 GPCSAKI 102


>sp|DNAG_METAC|DNA primase DnaG|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 GPCEAKI 10
GPC AKI
Sbjct: 96 GPCSAKI 102


>sp|DNAG_THEVO|DNA primase DnaG|Thermoplasma volcanium (strain ATCC 51530

Query: 4 GPCEAKI 10
GPC+AK+
Sbjct: 111 GPCKAKV 117


>sp|DNAG_PICTO|DNA primase DnaG|Picrophilus torridus (strain ATCC 700027

Query: 4 GPCEAKI 10
GPC+AK+
Sbjct: 97 GPCKAKV 103


>sp|DNAG_THEAC|DNA primase DnaG|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 GPCEAKI 10
GPC+AK+
Sbjct: 111 GPCKAKV 117


>sp|DNAG_METTH|DNA primase DnaG|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 GPCEAKI 10
GPCEA I
Sbjct: 98 GPCEAYI 104


>sp|DNAG_METST|DNA primase DnaG|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 GPCEAKI 10
GPCEA +
Sbjct: 98 GPCEANL 104


>sp|DNAG_METBU|DNA primase DnaG|Methanococcoides burtonii (strain DSM 6242

Query: 4 GPCEAKI 10
GPC AKI
Sbjct: 96 GPCAAKI 102


>sp|IF2P_PYRAR|PROBABLE translation initiation factor IF-2|Pyrobaculum arsenaticum (strain

Query: 2 VEGPCEAKI 10
+EGP EAK+
Sbjct: 272 LEGPKEAKV 280


>sp|DNAG_THEON|DNA primase DnaG|Thermococcus onnurineus (strain NA1)

Query: 4 GPCEAKI 10
GP EAKI
Sbjct: 125 GPAEAKI 131


>sp|IF2P_PYRAE|PROBABLE translation initiation factor IF-2|Pyrobaculum aerophilum (strain

Query: 1 TVEGPCEAKI 10
++EGP EA++
Sbjct: 271 SLEGPKEARV 280


>sp|DNAG_METTP|DNA primase DnaG|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 GPCEAKI 10
GPC A+I
Sbjct: 96 GPCMARI 102


>sp|IORA_PYRAB|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus abyssi (strain GE5 /

Query: 2 VEGPCEAKI 10
+EGP +AK+
Sbjct: 245 IEGPEDAKV 253


>sp|IORA_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus horikoshii (strain ATCC

Query: 2 VEGPCEAKI 10
+EGP +AK+
Sbjct: 245 IEGPEDAKV 253


>sp|GSA_HALMA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloarcula marismortui (strain ATCC 43049

Query: 1 TVEGPCEA 8
++EG CEA
Sbjct: 364 SLEGQCEA 371




217|Sequence|1081|1090|CEAKIECSDN

>sp|RL14_METBU|LARGE ribosomal subunit protein uL14|Methanococcoides burtonii (strain

Query: 3 AKIECSDN 10
AKIEC DN
Sbjct: 16 AKIECVDN 23


>sp|PNCB_METMA|NICOTINATE phosphoribosyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 CEAKIECS 8
CE KI CS
Sbjct: 334 CEGKINCS 341


>sp|GUAAB_SACI7|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 3 AKIECSD 9
AK+ECSD
Sbjct: 273 AKVECSD 279


>sp|GUAAB_SACI6|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 3 AKIECSD 9
AK+ECSD
Sbjct: 273 AKVECSD 279


>sp|GUAAB_SACI4|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 3 AKIECSD 9
AK+ECSD
Sbjct: 273 AKVECSD 279


>sp|GUAAB_SACI3|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 3 AKIECSD 9
AK+ECSD
Sbjct: 273 AKVECSD 279


>sp|GUAAB_SACI2|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 3 AKIECSD 9
AK+ECSD
Sbjct: 273 AKVECSD 279


>sp|GUAAB_SACI1|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 3 AKIECSD 9
AK+ECSD
Sbjct: 273 AKVECSD 279


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 CEAKIECS 8
CE ++ECS
Sbjct: 854 CEMQLECS 861


>sp|GUAAB_SACS2|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 3 AKIECSD 9
AKIECS+
Sbjct: 273 AKIECSN 279


>sp|RL14_KORCO|LARGE ribosomal subunit protein uL14|Korarchaeum cryptofilum (strain

Query: 3 AKIECSDN 10
A+++C+DN
Sbjct: 25 ARLKCADN 32


>sp|SYS2_METJA|TYPE-2 serine--tRNA ligase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 CEAKIE 6
CEAK+E
Sbjct: 126 CEAKVE 131


>sp|URED_NATPD|UREASE accessory protein UreD|Natronomonas pharaonis (strain ATCC 35678

Query: 1 CEAKIECSD 9
CE ++ C+D
Sbjct: 188 CEERLVCAD 196


>sp|Y1786_ARCFU|UNCHARACTERIZED protein AF_1786|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CEAKIEC 7
C+A +EC
Sbjct: 113 CQANLEC 119


>sp|RL14_CENSY|LARGE ribosomal subunit protein uL14|Cenarchaeum symbiosum (strain A)

Query: 3 AKIECSDN 10
A++ C+DN
Sbjct: 28 ARVTCADN 35


>sp|Y1121_PYRAB|UPF0127 protein PYRAB11210|Pyrococcus abyssi (strain GE5 /

Query: 2 EAKIECSDN 10
E K+E +DN
Sbjct: 14 EGKVEIADN 22


>sp|RL14_METBF|LARGE ribosomal subunit protein uL14|Methanosarcina barkeri (strain

Query: 3 AKIECSDN 10
AK+ C DN
Sbjct: 16 AKVPCVDN 23




218|Sequence|1086|1095|ECSDNGDGTC

>sp|Y1062_METJA|UNCHARACTERIZED protein MJ1062|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ECSDNGD 7
+CSDN D
Sbjct: 59 KCSDNND 65


>sp|RPO3_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo3|Sulfolobus acidocaldarius (strain

Query: 1 ECSDNGDG 8
EC +N DG
Sbjct: 84 ECKENCDG 91


>sp|TOP6B_METMA|TYPE 2 DNA topoisomerase 6|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 DNGDGT 9
+NGDGT
Sbjct: 520 NNGDGT 525


>sp|RPO3_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo3|Sulfurisphaera tokodaii (strain DSM

Query: 1 ECSDNGDG 8
EC +N DG
Sbjct: 84 ECKENCDG 91


>sp|ACDG_METAC|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina

Query: 2 CSDNGDGTC 10
C + G+ TC
Sbjct: 18 CGECGEATC 26


>sp|ACDG2_METTE|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina

Query: 2 CSDNGDGTC 10
C + G+ TC
Sbjct: 18 CGECGEATC 26


>sp|RPO3_PICTO|DNA-DIRECTED RNA polymerase subunit Rpo3|Picrophilus torridus (strain ATCC

Query: 1 ECSDNGDG 8
+CS NG+G
Sbjct: 89 QCSCNGEG 96




219|Sequence|1091|1100|GDGTCSVSYL

>sp|Y1468_METJA|UNCHARACTERIZED protein MJ1468|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GDGTCS 6
GDGTCS
Sbjct: 471 GDGTCS 476


>sp|NADE_METKA|NH(3)-DEPENDENT NAD(+) synthetase|Methanopyrus kandleri (strain AV19 /

Query: 1 GDGTCSVS 8
GDG C V+
Sbjct: 162 GDGACDVA 169


>sp|Y182_METKA|PUTATIVE ABC transporter ATP-binding protein|Methanopyrus kandleri (strain

Query: 2 DGTCSV 7
DGTC+V
Sbjct: 7 DGTCAV 12


>sp|DPCKG_METS3|GTP-DEPENDENT dephospho-CoA kinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 GDGTCSV 7
GDG C V
Sbjct: 108 GDGNCHV 114


>sp|NADB_SULTO|L-ASPARTATE oxidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GDGTCSV 7
GDG C V
Sbjct: 65 GDGLCDV 71


>sp|MUTS_METBU|DNA mismatch repair protein MutS|Methanococcoides burtonii (strain DSM

Query: 1 GDGTCSVSYL 10
GDG VS+L
Sbjct: 134 GDGDYGVSFL 143


>sp|RL2_METB6|LARGE ribosomal subunit protein uL2|Methanoregula boonei (strain DSM

Query: 1 GDGTCSVS 8
GDGT S+S
Sbjct: 32 GDGTKSIS 39




220|Sequence|1096|1105|SVSYLPTKPG

>sp|TRM1_PYRAB|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus abyssi (strain

Query: 3 SYLPTKP 9
S+LP+KP
Sbjct: 264 SFLPSKP 270


>sp|AROD_METS5|3-DEHYDROQUINATE dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 2 VSYLPTKPG 10
+SY+ TKPG
Sbjct: 146 LSYISTKPG 154


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 1 SVSYLPTKPG 10
S SYLP K G
Sbjct: 1139 SKSYLPDKRG 1148


>sp|UVRC_HALLT|UVRABC system protein C|Halorubrum lacusprofundi (strain ATCC 49239

Query: 5 LPTKPG 10
LPT+PG
Sbjct: 13 LPTEPG 18


>sp|Y158_METJA|UPF0425 pyridoxal phosphate-dependent protein MJ0158|Methanocaldococcus

Query: 2 VSYLPTKPG 10
+ YLP PG
Sbjct: 102 IHYLPELPG 110


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 1 SVSYLPTKPG 10
S SYLP K G
Sbjct: 878 SRSYLPEKRG 887


>sp|CDC61_AERPE|ORC1-TYPE DNA replication protein 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 VSYLPTKPG 10
+ +LP +PG
Sbjct: 147 IDFLPKRPG 155


>sp|TRM1_THEKO|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus kodakarensis

Query: 4 YLPTKPG 10
+LP KPG
Sbjct: 264 FLPDKPG 270


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 1 SVSYLPTKPG 10
S SYLP K G
Sbjct: 916 SRSYLPEKRG 925


>sp|DMSA_HALSA|PUTATIVE dimethyl sulfoxide reductase catalytic|Halobacterium salinarum

Query: 4 YLPTKPG 10
+LP KPG
Sbjct: 277 WLPIKPG 283


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 SVSYLPTKPG 10
S SYLP K G
Sbjct: 909 SRSYLPDKRG 918


>sp|Y1993_ARCFU|UNCHARACTERIZED protein AF_1993|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VSYLPTKPG 10
V+Y P PG
Sbjct: 103 VNYAPPNPG 111


>sp|GATA_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Aeropyrum pernix (strain ATCC 700893

Query: 1 SVSYLPTKPG 10
S S+LPT G
Sbjct: 82 STSFLPTTAG 91


>sp|RL37A_THEGJ|LARGE ribosomal subunit protein eL43|Thermococcus gammatolerans (strain

Query: 3 SYLPTKPG 10
+YLPT P
Sbjct: 67 AYLPTTPA 74


>sp|RL37A_THEKO|LARGE ribosomal subunit protein eL43|Thermococcus kodakarensis (strain

Query: 3 SYLPTKPG 10
+YLPT P
Sbjct: 67 AYLPTTPA 74




221|Sequence|1101|1110|PTKPGEYFVN

>sp|RPO2N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Halobacterium salinarum (strain ATCC

Query: 1 PTKPGEYFV 9
P PG YF+
Sbjct: 152 PADPGGYFI 160


>sp|RPO2N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo2N|Halobacterium salinarum (strain ATCC

Query: 1 PTKPGEYFV 9
P PG YF+
Sbjct: 152 PADPGGYFI 160


>sp|RPO2N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanothermobacter thermautotrophicus

Query: 1 PTKPGEYFV 9
P PG YF+
Sbjct: 147 PADPGGYFI 155


>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 1 PTKPGEYFV 9
P PG YF+
Sbjct: 143 PKDPGGYFI 151


>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 1 PTKPGEYFV 9
P PG YF+
Sbjct: 151 PKDPGGYFI 159


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 1 PTKPGEYFV 9
P PG YF+
Sbjct: 145 PKDPGGYFI 153


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 1 PTKPGEYFV 9
P PG YF+
Sbjct: 145 PKDPGGYFI 153


>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 1 PTKPGEYFV 9
P PG YF+
Sbjct: 183 PDDPGGYFI 191


>sp|UVRC_HALLT|UVRABC system protein C|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 PTKPGEY 7
PT+PG Y
Sbjct: 14 PTEPGVY 20


>sp|HPS_METBF|3-HEXULOSE-6-PHOSPHATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 KPGEYFV 9
KPG+Y V
Sbjct: 354 KPGDYIV 360


>sp|IDH_CALNO|ISOCITRATE dehydrogenase [NADP]|Caldococcus noboribetus

Query: 2 TKPGEYFV 9
T+PGEY V
Sbjct: 292 TRPGEYNV 299


>sp|SYR_METAR|ARGININE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 KPGEY 7
KPGEY
Sbjct: 466 KPGEY 470


>sp|Y946_ARCFU|UNCHARACTERIZED protein AF_0946|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PTKPGEYFV 9
PT+PG Y V
Sbjct: 246 PTEPGYYVV 254


>sp|SYE_SULTO|GLUTAMATE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PTKPGEY 7
P+KP EY
Sbjct: 436 PSKPSEY 442


>sp|NUCS_SULAC|ENDONUCLEASE NucS|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 KPGEYFV 9
KPGE+F+
Sbjct: 116 KPGEFFL 122


>sp|AMPPA_METLZ|AMP phosphorylase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 KPGEY 7
KPGEY
Sbjct: 456 KPGEY 460


>sp|GMHA_THEVO|PROBABLE phosphoheptose isomerase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 KPGEYFV 9
KPG+Y V
Sbjct: 117 KPGDYVV 123


>sp|SLAA_METS5|S-LAYER protein A|Metallosphaera sedula (strain ATCC 51363

Query: 1 PTKPGEYFV 9
PT PG Y +
Sbjct: 1327 PTMPGSYTI 1335


>sp|CBID_PICTO|COBALT-PRECORRIN-5B C(1)-methyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 PTKPGEYFVN 10
P KPG +N
Sbjct: 104 PVKPGNAAIN 113


>sp|RL2_THEVO|LARGE ribosomal subunit protein uL2|Thermoplasma volcanium (strain ATCC

Query: 3 KPGEYFV 9
KPGEY V
Sbjct: 32 KPGEYVV 38


>sp|Y3581_PYRAE|UPF0210 protein PAE3581|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 KPGEYF 8
KPG+Y+
Sbjct: 404 KPGDYY 409


>sp|KTHY_METMJ|PROBABLE thymidylate kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PTKPGEYFVN 10
P K EYF N
Sbjct: 141 PEKKREYFEN 150


>sp|Y1293_METJA|UNCHARACTERIZED protein MJ1293|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PGEYFV 9
PG+YF+
Sbjct: 205 PGQYFI 210


>sp|UVRC_METST|UVRABC system protein C|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PTKPGEYFVN 10
P KPG Y ++
Sbjct: 10 PQKPGVYIMH 19


>sp|FEN_HYPBU|FLAP endonuclease 1|Hyperthermus butylicus (strain DSM 5456

Query: 1 PTKPGEYFVN 10
P K EYF+N
Sbjct: 279 PLKIYEYFLN 288


>sp|FEN_STAMF|FLAP endonuclease 1|Staphylothermus marinus (strain ATCC 43588

Query: 1 PTKPGEYFVN 10
P K EYF+N
Sbjct: 280 PEKIVEYFLN 289




222|Sequence|1106|1115|EYFVNILFEE

>sp|SRP54_STAMF|SIGNAL recognition particle 54 kDa|Staphylothermus marinus (strain ATCC

Query: 1 EYFVNILFEE 10
E+FVNI++EE
Sbjct: 69 EWFVNIVYEE 78


>sp|SRP54_PYRAR|SIGNAL recognition particle 54 kDa|Pyrobaculum arsenaticum (strain DSM

Query: 1 EYFVNILFEE 10
EY + +L+EE
Sbjct: 71 EYLIYVLYEE 80


>sp|SRP54_PYRAE|SIGNAL recognition particle 54 kDa|Pyrobaculum aerophilum (strain ATCC

Query: 1 EYFVNILFEE 10
EY + +L+EE
Sbjct: 71 EYLIYVLYEE 80


>sp|SRP54_PYRCJ|SIGNAL recognition particle 54 kDa|Pyrobaculum calidifontis (strain DSM

Query: 1 EYFVNILFEE 10
EY V +L+EE
Sbjct: 70 EYLVYVLYEE 79


>sp|SRP54_PYRNV|SIGNAL recognition particle 54 kDa|Pyrobaculum neutrophilum (strain DSM

Query: 1 EYFVNILFEE 10
EY + +L+EE
Sbjct: 71 EYLLYVLYEE 80


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 1 EYFVNILFE 9
EY VN LFE
Sbjct: 1071 EYGVNSLFE 1079


>sp|MOAA_PYRAE|PROBABLE GTP 3',8-cyclase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EYFVNILFE 9
E VNI+FE
Sbjct: 206 ETLVNIIFE 214


>sp|SRP54_THEVO|SIGNAL recognition particle 54 kDa|Thermoplasma volcanium (strain ATCC

Query: 1 EYFVNILFEE 10
+Y V I++EE
Sbjct: 73 DYMVKIIYEE 82


>sp|Y378_METVS|UPF0235 protein Mevan_0378|Methanococcus vannielii (strain ATCC 35089

Query: 1 EYFVNILFEE 10
EY VNIL E
Sbjct: 88 EYVVNILKRE 97


>sp|SRP54_THEAC|SIGNAL recognition particle 54 kDa|Thermoplasma acidophilum (strain ATCC

Query: 1 EYFVNILFEE 10
+Y V I++EE
Sbjct: 73 DYMVRIIYEE 82


>sp|KDPA_THEVO|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Thermoplasma volcanium (strain

Query: 1 EYFVNIL 7
EYF+N+L
Sbjct: 83 EYFINLL 89


>sp|KDPA_THEAC|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Thermoplasma acidophilum (strain

Query: 1 EYFVNIL 7
EYF+N+L
Sbjct: 83 EYFINLL 89


>sp|Y534_METJA|UNCHARACTERIZED protein MJ0534|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EYFVNILF 8
EYF NIL
Sbjct: 188 EYFANILL 195




223|Sequence|1111|1120|ILFEEVHIPG

>sp|UVRC_METST|UVRABC system protein C|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 FEEVHIPG 10
FEEV++PG
Sbjct: 490 FEEVYLPG 497


>sp|G3P_METVS|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 2 LFEEVHIP 9
LFEE +IP
Sbjct: 60 LFEEANIP 67


>sp|MTIP_METAC|PROBABLE S-methyl-5'-thioinosine phosphorylase|Methanosarcina acetivorans

Query: 4 EEVHIP 9
EE+HIP
Sbjct: 56 EEIHIP 61


>sp|UVRC_METHJ|UVRABC system protein C|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 EEVHIPG 10
EE++IPG
Sbjct: 472 EEIYIPG 478


>sp|Y1387_METM5|UPF0248 protein MmarC5_1387|Methanococcus maripaludis (strain C5 /

Query: 1 ILFEEVHIP 9
++F+E HIP
Sbjct: 48 LVFDETHIP 56


>sp|Y286_METMP|UPF0248 protein MMP0286|Methanococcus maripaludis (strain DSM 14266

Query: 1 ILFEEVHIP 9
++F+E HIP
Sbjct: 48 LVFDETHIP 56


>sp|PUR2_METTH|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 LFEEVHIPG 10
LFE+ IPG
Sbjct: 108 LFEDYRIPG 116


>sp|RBL_THEKO|RIBULOSE bisphosphate carboxylase|Thermococcus kodakarensis (strain ATCC

Query: 3 FEEVHIPG 10
FEE ++PG
Sbjct: 96 FEEANLPG 103


>sp|Y667_METM6|UPF0248 protein MmarC6_0667|Methanococcus maripaludis (strain C6 /

Query: 1 ILFEEVHIP 9
+ F+E HIP
Sbjct: 48 LFFDETHIP 56


>sp|UVRC_METTH|UVRABC system protein C|Methanothermobacter thermautotrophicus (strain

Query: 4 EEVHIPG 10
EEV++PG
Sbjct: 474 EEVYLPG 480


>sp|PUR2_METST|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 LFEEVHIPG 10
LFE+ IPG
Sbjct: 109 LFEDYDIPG 117


>sp|RBL_THEON|RIBULOSE bisphosphate carboxylase|Thermococcus onnurineus (strain NA1)

Query: 3 FEEVHIPG 10
FEE ++PG
Sbjct: 96 FEEANLPG 103


>sp|Y1298_METVS|UPF0248 protein Mevan_1298|Methanococcus vannielii (strain ATCC 35089

Query: 1 ILFEEVHIP 9
++F E HIP
Sbjct: 48 LVFNETHIP 56


>sp|APGM2_METTH|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanothermobacter thermautotrophicus

Query: 3 FEEVHIPG 10
E +H+PG
Sbjct: 256 LENIHVPG 263


>sp|Y1289_METM7|UPF0248 protein MmarC7_1289|Methanococcus maripaludis (strain C7 /

Query: 1 ILFEEVHIP 9
++F+E H+P
Sbjct: 48 LVFDETHVP 56


>sp|RAD25_HALMA|PUTATIVE DNA 3'-5' helicase Rad25|Haloarcula marismortui (strain ATCC 43049

Query: 1 ILFEEVH 7
I+F+EVH
Sbjct: 368 IVFDEVH 374


>sp|UVRC_METBF|UVRABC system protein C|Methanosarcina barkeri (strain Fusaro /

Query: 4 EEVHIPG 10
EE+++PG
Sbjct: 468 EEIYVPG 474


>sp|RISB_HALLT|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 ILFEEVHIPG 10
++ +EV +PG
Sbjct: 33 VIVDEVSVPG 42


>sp|UVRC_METMA|UVRABC system protein C|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 EEVHIPG 10
EE+++PG
Sbjct: 474 EEIYVPG 480


>sp|RL6_SULTO|LARGE ribosomal subunit protein uL6|Sulfurisphaera tokodaii (strain DSM

Query: 2 LFEEVHIP 9
L+EE+ IP
Sbjct: 6 LYEEIEIP 13


>sp|Y303_ARCFU|UNCHARACTERIZED protein AF_0303|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ILFEEVHIP 9
I+F E++IP
Sbjct: 291 IVFNEIYIP 299


>sp|GATE_PYRNV|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum neutrophilum (strain DSM

Query: 2 LFEEVHI 8
LF+E+H+
Sbjct: 110 LFDEIHV 116


>sp|PURE_METTH|PROBABLE N5-carboxyaminoimidazole ribonucleotide

Query: 2 LFEEVHIP 9
+FEE+ IP
Sbjct: 24 IFEELRIP 31


>sp|CAS3_METJA|PUTATIVE CRISPR-associated nuclease/helicase Cas3|Methanocaldococcus

Query: 1 ILFEEVH 7
I+F+EVH
Sbjct: 349 IIFDEVH 355


>sp|RL6_METVS|LARGE ribosomal subunit protein uL6|Methanococcus vannielii (strain

Query: 1 ILFEEVHIPG 10
++ EE+ IPG
Sbjct: 6 LIREEIEIPG 15


>sp|RL6_METVA|LARGE ribosomal subunit protein uL6|Methanococcus vannielii

Query: 1 ILFEEVHIPG 10
++ EE+ IPG
Sbjct: 6 LIREEIEIPG 15


>sp|EF1A_METTP|ELONGATION factor 1-alpha|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 ILFEEVHIPG 10
++FE H+ G
Sbjct: 259 VIFEPAHVSG 268




224|Sequence|1116|1125|VHIPGSPFKA

>sp|RS4_AERPE|SMALL ribosomal subunit protein uS4|Aeropyrum pernix (strain ATCC 700893

Query: 2 HIPGSPFK 9
+ PGSPFK
Sbjct: 155 YAPGSPFK 162


>sp|DTDA_METKA|D-AMINOACYL-TRNA deacylase|Methanopyrus kandleri (strain AV19 /

Query: 1 VHIPGSP 7
VH+PG+P
Sbjct: 91 VHVPGNP 97


>sp|NTPTH_THEKO|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 HIPGSPF 8
H+PG PF
Sbjct: 71 HLPGVPF 77


>sp|PRIS_METBU|DNA primase small subunit PriS|Methanococcoides burtonii (strain DSM

Query: 2 HIPGSP 7
HIPG+P
Sbjct: 103 HIPGAP 108


>sp|MTMB_METMA|MONOMETHYLAMINE methyltransferase MtmB|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 IPGSPFK 9
IPGSP++
Sbjct: 170 IPGSPYE 176


>sp|Y811_METTH|UPF0305 protein MTH_811|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 VHIPGSPF 8
+H PG+PF
Sbjct: 108 LHPPGTPF 115


>sp|DTDA_SULTO|D-AMINOACYL-TRNA deacylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VHIPGSP 7
VH PG+P
Sbjct: 59 VHYPGNP 65


>sp|DTDA_SACS2|D-AMINOACYL-TRNA deacylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VHIPGSP 7
VH PG+P
Sbjct: 59 VHYPGNP 65


>sp|Y1289_ARCFU|PUTATIVE GTPase AF_1289|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 PGSPF 8
PGSPF
Sbjct: 84 PGSPF 88


>sp|DTDA_SACI7|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 VHIPGSP 7
VH PG+P
Sbjct: 59 VHYPGNP 65


>sp|DTDA_SACI6|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 VHIPGSP 7
VH PG+P
Sbjct: 59 VHYPGNP 65


>sp|DTDA_SACI4|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 VHIPGSP 7
VH PG+P
Sbjct: 59 VHYPGNP 65


>sp|DTDA_SACI3|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 VHIPGSP 7
VH PG+P
Sbjct: 59 VHYPGNP 65


>sp|DTDA_SACI2|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 VHIPGSP 7
VH PG+P
Sbjct: 59 VHYPGNP 65


>sp|DTDA_SACI1|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 VHIPGSP 7
VH PG+P
Sbjct: 59 VHYPGNP 65


>sp|Y267_ARCFU|UNCHARACTERIZED protein AF_0267|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VHIPGSPFK 9
+H+ GSP++
Sbjct: 44 MHLEGSPYE 52


>sp|PYRG_METTP|CTP synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 VHIPGSPF 8
+ IPG PF
Sbjct: 493 MEIPGHPF 500


>sp|TOP6A_NATPD|TYPE 2 DNA topoisomerase 6|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VHIPGSPFKA 10
VH+ G P +A
Sbjct: 223 VHLKGQPARA 232


>sp|DAPF_METTH|DIAMINOPIMELATE epimerase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 VHIPGSPFK 9
VH+PG K
Sbjct: 248 VHLPGGELK 256


>sp|MTRA2_METRM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 2|Methanobrevibacter ruminantium

Query: 2 HIPGSPFKA 10
HI G FKA
Sbjct: 84 HITGQSFKA 92


>sp|DTDA_METS5|D-AMINOACYL-TRNA deacylase|Metallosphaera sedula (strain ATCC 51363

Query: 1 VHIPGSPFKA 10
+H PG+P K+
Sbjct: 59 IHHPGNPGKS 68


>sp|DPHB_STAMF|DIPHTHINE synthase|Staphylothermus marinus (strain ATCC 43588

Query: 3 IPGSPFKA 10
+PG PF A
Sbjct: 84 VPGDPFIA 91


>sp|MTRA_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanosarcina barkeri (strain

Query: 2 HIPGSP 7
H+PG P
Sbjct: 35 HLPGQP 40


>sp|MTRA_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanosarcina mazei (strain ATCC

Query: 2 HIPGSP 7
H+PG P
Sbjct: 35 HLPGKP 40


>sp|MTRA_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanosarcina acetivorans (strain

Query: 2 HIPGSP 7
H+PG P
Sbjct: 35 HLPGKP 40


>sp|DTDA_SULAC|D-AMINOACYL-TRNA deacylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VHIPGSP 7
VH PG+P
Sbjct: 59 VHYPGNP 65




225|Sequence|1121|1130|SPFKADIEMP

>sp|PORD_PYRFU|PYRUVATE synthase subunit PorD|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SPFKADIE 8
SPFKADIE
Sbjct: 4 SPFKADIE 11


>sp|PORD_PYRAB|PYRUVATE synthase subunit PorD|Pyrococcus abyssi (strain GE5 /

Query: 1 SPFKADIE 8
SPFKADIE
Sbjct: 4 SPFKADIE 11


>sp|PORD_PYRHO|PYRUVATE synthase subunit PorD|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SPFKADIE 8
SPFKADIE
Sbjct: 4 SPFKADIE 11


>sp|PURP_CENSY|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Cenarchaeum symbiosum (strain A)

Query: 1 SPFKADIE 8
SP KADIE
Sbjct: 194 SPLKADIE 201


>sp|Y2188_ARCFU|UNCHARACTERIZED protein AF_2188|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PFKADI 7
PFKAD+
Sbjct: 33 PFKADV 38


>sp|TNAA_AERPE|PROBABLE tryptophanase|Aeropyrum pernix (strain ATCC 700893

Query: 2 PFKADIEM 9
PFK DI++
Sbjct: 160 PFKGDIDV 167


>sp|GIN15_SACS2|DNA replication complex GINS protein|Saccharolobus solfataricus (strain

Query: 1 SPFKADIE 8
+P+K DIE
Sbjct: 141 TPYKIDIE 148




226|Sequence|1126|1135|DIEMPFDPSK

>sp|GLYA_HYPBU|SERINE hydroxymethyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 2 IEMPFDP 8
IEMP+DP
Sbjct: 148 IEMPYDP 154


>sp|KATG2_HALMA|CATALASE-PEROXIDASE 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 DIEMPFDPSK 10
D+E+PF+P +
Sbjct: 552 DVEIPFEPGR 561


>sp|RL24_METLZ|LARGE ribosomal subunit protein uL24|Methanocorpusculum labreanum (strain

Query: 1 DIEMPFDPSK 10
D+ P DPSK
Sbjct: 91 DVPRPLDPSK 100


>sp|HDRE_METMA|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit E|Methanosarcina mazei (strain

Query: 2 IEMPFDPSK 10
IE+PF P++
Sbjct: 134 IELPFTPAE 142


>sp|HDRE_METAC|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit E|Methanosarcina acetivorans

Query: 2 IEMPFDPSK 10
IE+PF P++
Sbjct: 139 IELPFTPAE 147


>sp|AGLB_HALVD|DOLICHYL-MONOPHOSPHOOLIGOSACCHARIDE--PROTEIN glycotransferase AglB|Haloferax volcanii (strain ATCC 29605

Query: 4 MPFDP 8
MPFDP
Sbjct: 74 MPFDP 78


>sp|SYDND_HALWD|ASPARTATE--TRNA(ASP/ASN) ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DIEMPFDPS 9
D E+P DPS
Sbjct: 99 DTELPLDPS 107


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 2 IEMPFDPSK 10
+++P DPS+
Sbjct: 490 LQLPLDPSR 498


>sp|Y1357_HALVD|PUTATIVE transcriptional regulator HVO_1357|Haloferax volcanii (strain ATCC

Query: 2 IEMPFD 7
+EMPFD
Sbjct: 104 VEMPFD 109


>sp|TBP_PYRIL|TATA-BOX-BINDING protein|Pyrobaculum islandicum (strain DSM 4184

Query: 3 EMPFDP 8
E+PFDP
Sbjct: 92 EVPFDP 97


>sp|HDRE_METTT|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit E|Methanosarcina thermophila

Query: 2 IEMPFDP 8
IE+PF P
Sbjct: 139 IELPFTP 145


>sp|GLYA_SACS2|SERINE hydroxymethyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 2 IEMPFD 7
IEMPFD
Sbjct: 139 IEMPFD 144


>sp|AROB_PYRFU|3-DEHYDROQUINATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IEMPFDP 8
+++PFDP
Sbjct: 280 VKIPFDP 286


>sp|GLYA_SACI6|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 IEMPFD 7
IEMPFD
Sbjct: 139 IEMPFD 144


>sp|GLYA_SACI7|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain Y.G.57.14

Query: 2 IEMPFD 7
IEMPFD
Sbjct: 139 IEMPFD 144


>sp|GLYA_SACI4|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 IEMPFD 7
IEMPFD
Sbjct: 139 IEMPFD 144


>sp|GLYA_SACI3|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 2 IEMPFD 7
IEMPFD
Sbjct: 139 IEMPFD 144


>sp|GLYA_SACI2|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 2 IEMPFD 7
IEMPFD
Sbjct: 139 IEMPFD 144


>sp|GLYA_SACI1|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain Y.N.15.51

Query: 2 IEMPFD 7
IEMPFD
Sbjct: 139 IEMPFD 144


>sp|SYK_METST|LYSINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 EMPFDPS 9
EMPF PS
Sbjct: 362 EMPFQPS 368


>sp|PUR8_METJA|ADENYLOSUCCINATE lyase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DIEMPFDPSK 10
++E FDP+K
Sbjct: 274 ELEEEFDPTK 283


>sp|TBP_PYRCJ|TATA-BOX-BINDING protein|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 EMPFDP 8
E+PFDP
Sbjct: 92 EVPFDP 97


>sp|Y1266_METJA|UNCHARACTERIZED protein MJ1266|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EMPFDPS 9
E+P+DP+
Sbjct: 211 EIPYDPN 217


>sp|SYDND_NATPD|ASPARTATE--TRNA(ASP/ASN) ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DIEMPFDPS 9
D E+P DP+
Sbjct: 99 DTELPLDPT 107


>sp|SYE_AERPE|GLUTAMATE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 EMPFDPSK 10
E+PF PS+
Sbjct: 440 EIPFHPSR 447


>sp|SRP54_METJA|SIGNAL recognition particle 54 kDa|Methanocaldococcus jannaschii (strain

Query: 1 DIEMPFDPSK 10
D+E PFDP K
Sbjct: 280 DLE-PFDPKK 288


>sp|SYDND_HALMA|ASPARTATE--TRNA(ASP/ASN) ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 DIEMPFDPS 9
D E+P DPS
Sbjct: 99 DPELPLDPS 107


>sp|UVRB_HALSA|UVRABC system protein B|Halobacterium salinarum (strain ATCC 700922

Query: 2 IEMPFDPS 9
+E PFDP+
Sbjct: 21 VEAPFDPA 28


>sp|RL24_NANEQ|LARGE ribosomal subunit protein uL24|Nanoarchaeum equitans (strain

Query: 1 DIEMPFDPSK 10
D + PF PSK
Sbjct: 97 DRQYPFHPSK 106


>sp|GLYA_SULAC|SERINE hydroxymethyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 2 IEMPFD 7
IEMP+D
Sbjct: 140 IEMPYD 145


>sp|GLYA_METS5|SERINE hydroxymethyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 2 IEMPFD 7
IEMP+D
Sbjct: 139 IEMPYD 144


>sp|PAN1_HALSA|PROTEASOME-ACTIVATING nucleotidase 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 DIEMPFDPS 9
D+E+P+D S
Sbjct: 7 DVELPYDDS 15


>sp|GLYA_SULTO|SERINE hydroxymethyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 IEMPFDPSK 10
IE+P+D K
Sbjct: 140 IELPYDADK 148


>sp|FOLCP_HALVD|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 2 IEMPFDPSK 10
I+ P DPS+
Sbjct: 695 IDAPVDPSR 703


>sp|HISX_METKA|HISTIDINOL dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 DIEMPFDPSK 10
D++MP PS+
Sbjct: 230 DVDMPAGPSE 239


>sp|AROC_METBU|CHORISMATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 3 EMPFDPSK 10
EMPFD K
Sbjct: 166 EMPFDTIK 173


>sp|KATG_HALSA|CATALASE-PEROXIDASE salinarum (strain ATCC 700922

Query: 1 DIEMPFDPSK 10
D+++PF+P +
Sbjct: 541 DVDVPFEPGR 550


>sp|KATG_HALS3|CATALASE-PEROXIDASE salinarum (strain ATCC 29341

Query: 1 DIEMPFDPSK 10
D+++PF+P +
Sbjct: 541 DVDVPFEPGR 550


>sp|ACEA_HALVD|ISOCITRATE lyase|Haloferax volcanii (strain ATCC 29605

Query: 1 DIEMPFDP 8
DIE FDP
Sbjct: 312 DIETEFDP 319


>sp|TRPE_THEKO|ANTHRANILATE synthase component 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 EMPFDP 8
E PFDP
Sbjct: 136 EAPFDP 141


>sp|SRP54_META3|SIGNAL recognition particle 54 kDa|Methanococcus aeolicus (strain ATCC

Query: 1 DIEMPFDPSK 10
D+E PFDP K
Sbjct: 280 DLE-PFDPKK 288


>sp|SYV_SULAC|VALINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 MPFDPSK 10
+P DPSK
Sbjct: 461 LPIDPSK 467


>sp|HEM3_THEAC|PROBABLE porphobilinogen deaminase|Thermoplasma acidophilum (strain ATCC

Query: 5 PFDPSK 10
PFDP K
Sbjct: 179 PFDPEK 184


>sp|GPN_PYRAB|GPN-LOOP GTPase PAB0955|Pyrococcus abyssi (strain GE5 /

Query: 3 EMPFDPS 9
E+P++PS
Sbjct: 41 ELPYEPS 47




227|Sequence|1131|1140|FDPSKVVASG

>sp|CH60_METHJ|CHAPERONIN GroEL|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 FDPSKVVASG 10
DP+KVV SG
Sbjct: 493 LDPTKVVRSG 502


>sp|RS2_HYPBU|SMALL ribosomal subunit protein uS2|Hyperthermus butylicus (strain DSM

Query: 1 FDPSKVVA 8
F+PSK+VA
Sbjct: 76 FEPSKIVA 83


>sp|CH60_METAC|CHAPERONIN GroEL|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DPSKVVASG 10
DP+KVV SG
Sbjct: 494 DPTKVVRSG 502


>sp|CH60_METBF|CHAPERONIN GroEL|Methanosarcina barkeri (strain Fusaro /

Query: 2 DPSKVVASG 10
DP+KVV SG
Sbjct: 494 DPTKVVRSG 502


>sp|CH60_METMA|CHAPERONIN GroEL|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DPSKVVASG 10
DP+KVV SG
Sbjct: 494 DPTKVVRSG 502


>sp|DAPF_METAR|DIAMINOPIMELATE epimerase|Methanocella arvoryzae (strain DSM 22066

Query: 1 FDPSKVVASG 10
FDP K+ A+G
Sbjct: 129 FDPKKIPAAG 138


>sp|GLKA_THELN|ADP-DEPENDENT glucose/glucosamine kinase|Thermococcus litoralis (strain ATCC

Query: 1 FDPSKVVAS 9
F P+K+VAS
Sbjct: 434 FVPTKIVAS 442


>sp|PELO_PYRAR|PROTEIN pelota homolog|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 FDPSKVVASG 10
++P KVV +G
Sbjct: 190 YNPDKVVLAG 199


>sp|AGLP_HALVD|HEXURONIC acid methyltransferase AglP|Haloferax volcanii (strain ATCC 29605

Query: 1 FDPSKVVASG 10
F+PS + A+G
Sbjct: 130 FEPSPIAANG 139


>sp|LEUC_METAC|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina

Query: 1 FDPSKVV 7
+DPSK+V
Sbjct: 56 WDPSKIV 62


>sp|LEUC_METMA|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina mazei

Query: 1 FDPSKVV 7
+DPSK+V
Sbjct: 56 WDPSKIV 62


>sp|PCNA2_SULAC|DNA polymerase sliding clamp 2|Sulfolobus acidocaldarius (strain ATCC

Query: 2 DPSKVV 7
DPSKVV
Sbjct: 40 DPSKVV 45


>sp|LEUC1_METKA|3-ISOPROPYLMALATE dehydratase large subunit 1|Methanopyrus kandleri (strain AV19 /

Query: 1 FDPSKVV 7
+DPSK+V
Sbjct: 54 WDPSKIV 60




228|Sequence|1136|1145|VVASGPGLEH

>sp|ENDA_SACI7|TRNA-SPLICING endonuclease|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 VVASGPGLEH 10
V GPGLEH
Sbjct: 118 VYTLGPGLEH 127


>sp|ENDA_SACI2|TRNA-SPLICING endonuclease|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 VVASGPGLEH 10
V GPGLEH
Sbjct: 118 VYTLGPGLEH 127


>sp|ENDA_SACI1|TRNA-SPLICING endonuclease|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 VVASGPGLEH 10
V GPGLEH
Sbjct: 118 VYTLGPGLEH 127


>sp|HIS8_METBU|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcoides burtonii (strain DSM 6242

Query: 1 VVASGPGLE 9
+VASGPG++
Sbjct: 90 IVASGPGMD 98


>sp|ENDA_SACI6|TRNA-SPLICING endonuclease|Saccharolobus islandicus (strain M.16.4 /

Query: 1 VVASGPGLEH 10
V GPGLEH
Sbjct: 118 VYTLGPGLEH 127


>sp|ENDA_SACI4|TRNA-SPLICING endonuclease|Saccharolobus islandicus (strain M.14.25 /

Query: 1 VVASGPGLEH 10
V GPGLEH
Sbjct: 118 VYTLGPGLEH 127


>sp|ENDA_SACI3|TRNA-SPLICING endonuclease|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 VVASGPGLEH 10
V GPGLEH
Sbjct: 118 VYTLGPGLEH 127


>sp|HIS8_METMA|HISTIDINOL-PHOSPHATE aminotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VVASGPGLE 9
+VASGPG++
Sbjct: 94 IVASGPGMD 102


>sp|ENDA_SACS2|TRNA-SPLICING endonuclease|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VVASGPGLEH 10
V GPGLEH
Sbjct: 118 VYTLGPGLEH 127


>sp|ENDA_HYPBU|TRNA-SPLICING endonuclease|Hyperthermus butylicus (strain DSM 5456

Query: 1 VVASGPGLEH 10
V GPGLEH
Sbjct: 117 VYERGPGLEH 126


>sp|HIS8_METAC|HISTIDINOL-PHOSPHATE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VVASGPGLE 9
+VASGPG++
Sbjct: 93 IVASGPGMD 101


>sp|ENDA_SULTO|TRNA-SPLICING endonuclease|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VVASGPGLEH 10
V GPG+EH
Sbjct: 116 VYTIGPGIEH 125


>sp|HIS8_METBF|HISTIDINOL-PHOSPHATE aminotransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 VVASGPGLE 9
++ASGPG++
Sbjct: 92 LIASGPGMD 100


>sp|Y363_METJA|MCM-LIKE protein MJ0363|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VVASGPGL 8
V +SGPGL
Sbjct: 423 VTSSGPGL 430


>sp|KAE1_NANEQ|TRNA N6-adenosine threonylcarbamoyltransferase|Nanoarchaeum equitans

Query: 2 VASGPGL 8
V+SGPGL
Sbjct: 73 VSSGPGL 79


>sp|PURA_THEON|ADENYLOSUCCINATE synthetase|Thermococcus onnurineus (strain NA1)

Query: 1 VVASGPGLEH 10
++ +GP LEH
Sbjct: 322 IIKTGPELEH 331


>sp|Y1359_METJA|UPF0273 protein MJ1359|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 GPGLEH 10
GPG+EH
Sbjct: 181 GPGVEH 186


>sp|Y1861_SACS2|UPF0273 protein SSO1861|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 GPGLEH 10
GPG+EH
Sbjct: 180 GPGVEH 185


>sp|Y1830_SULTO|UPF0273 protein STK_18300|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 GPGLEH 10
GPG+EH
Sbjct: 183 GPGVEH 188


>sp|ENDA_PYRAR|TRNA-SPLICING endonuclease|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 VVASGPGLEH 10
V GPG++H
Sbjct: 119 VYEKGPGIDH 128


>sp|Y258_PYRAB|UPF0273 protein PYRAB02580|Pyrococcus abyssi (strain GE5 /

Query: 5 GPGLEH 10
GPG+EH
Sbjct: 181 GPGVEH 186


>sp|Y1931_PYRFU|UPF0273 protein PF1931|Pyrococcus furiosus (strain ATCC 43587

Query: 5 GPGLEH 10
GPG+EH
Sbjct: 181 GPGVEH 186


>sp|ENDA_PYRAE|TRNA-SPLICING endonuclease|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VVASGPGLEH 10
V GPG++H
Sbjct: 119 VYEKGPGIDH 128


>sp|ENDA_PYRIL|TRNA-SPLICING endonuclease|Pyrobaculum islandicum (strain DSM 4184

Query: 1 VVASGPGLEH 10
V GPG++H
Sbjct: 119 VYERGPGIDH 128


>sp|ENDA_SULAC|TRNA-SPLICING endonuclease|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 GPGLEH 10
PGLEH
Sbjct: 121 APGLEH 126


>sp|Y284_PYRHO|UPF0273 protein PH0284|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 GPGLEH 10
GPG+EH
Sbjct: 181 GPGVEH 186


>sp|CBSA_SACS2|CYTOCHROME b558/566 subunit A|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 ASGPGL 8
ASGPGL
Sbjct: 130 ASGPGL 135


>sp|Y1590_THEKO|UPF0273 protein TK1590|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 GPGLEH 10
GPG+EH
Sbjct: 181 GPGVEH 186


>sp|PURA_THEKO|ADENYLOSUCCINATE synthetase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VVASGPGLEH 10
++ +GP LEH
Sbjct: 322 LIKTGPELEH 331


>sp|PURA_THEGJ|ADENYLOSUCCINATE synthetase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 VVASGPGLEH 10
++ +GP LEH
Sbjct: 322 LIKTGPELEH 331


>sp|NNR_PYRAE|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Pyrobaculum aerophilum (strain

Query: 1 VVASGPGL 8
VVA GPGL
Sbjct: 317 VVAMGPGL 324


>sp|PURA_THESM|ADENYLOSUCCINATE synthetase|Thermococcus sibiricus (strain DSM 12597

Query: 1 VVASGPGLEH 10
++ +GP LEH
Sbjct: 322 LIKTGPELEH 331


>sp|RADB_ARCFU|DNA repair and recombination protein|Archaeoglobus fulgidus (strain

Query: 5 GPGLEH 10
GP LEH
Sbjct: 174 GPSLEH 179


>sp|PURA_PYRSS|ADENYLOSUCCINATE synthetase|Pyrococcus sp. (strain ST700)

Query: 1 VVASGPGLEH 10
++ +GP LEH
Sbjct: 322 LIKTGPELEH 331


>sp|CBSA_SULAC|CYTOCHROME b558/566 subunit A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 ASGPGL 8
ASGPGL
Sbjct: 122 ASGPGL 127


>sp|ENDA_PYRNV|TRNA-SPLICING endonuclease|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 VVASGPGLEH 10
V GPG++H
Sbjct: 119 VYEKGPGIDH 128


>sp|Y1505_AERPE|UPF0273 protein APE_1505.1|Aeropyrum pernix (strain ATCC 700893

Query: 5 GPGLEH 10
GPG+EH
Sbjct: 181 GPGVEH 186


>sp|Y3143_PYRAE|UPF0273 protein PAE3143|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 GPGLEH 10
GPG+EH
Sbjct: 182 GPGVEH 187


>sp|PURA_PYRHO|ADENYLOSUCCINATE synthetase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VVASGPGLEH 10
++ +GP LEH
Sbjct: 322 LIKTGPELEH 331


>sp|SYI_AERPE|ISOLEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 VVASGPGLE 9
+ AS PG+E
Sbjct: 845 IAASNPGVE 853


>sp|PELO_HYPBU|PROTEIN pelota homolog|Hyperthermus butylicus (strain DSM 5456

Query: 1 VVASGPG 7
VVA+GPG
Sbjct: 197 VVAAGPG 203


>sp|PURA_PYRFU|ADENYLOSUCCINATE synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VVASGPGLEH 10
++ +GP LEH
Sbjct: 322 LIKTGPELEH 331


>sp|PURA_PYRAB|ADENYLOSUCCINATE synthetase|Pyrococcus abyssi (strain GE5 /

Query: 1 VVASGPGLEH 10
++ +GP LEH
Sbjct: 322 LIKTGPELEH 331


>sp|Y039_METKA|UPF0273 protein MK0039|Methanopyrus kandleri (strain AV19 /

Query: 5 GPGLEH 10
GPG+EH
Sbjct: 182 GPGVEH 187


>sp|LYSJ_THEKO|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 1 VVASGPGLEH 10
+V +GP EH
Sbjct: 56 IVVAGPMFEH 65


>sp|NNR_THEPD|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Thermofilum pendens (strain DSM

Query: 1 VVASGPGL 8
+VA GPGL
Sbjct: 324 IVAVGPGL 331


>sp|THI4_NATPD|THIAMINE thiazole synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 VASGPGLEH 10
V + PG+EH
Sbjct: 196 VLNAPGIEH 204


>sp|THI4_HALWD|THIAMINE thiazole synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 VASGPGLEH 10
V + PG+EH
Sbjct: 195 VLNAPGIEH 203




229|Sequence|1141|1150|PGLEHGKVGE

>sp|GGGPS_PICTO|GERANYLGERANYLGLYCERYL phosphate synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 PGLEHGKVGE 10
PG+ G+VGE
Sbjct: 133 PGMTVGRVGE 142


>sp|PPS_THEON|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Thermococcus onnurineus (strain NA1)

Query: 1 PGLEH--GKVGE 10
PGLEH GKV E
Sbjct: 137 PGLEHERGKVDE 148


>sp|PPS_THEKO|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PGLEH--GKVGE 10
PGLEH GKV E
Sbjct: 137 PGLEHERGKVDE 148


>sp|PRIS_PICTO|DNA primase small subunit PriS|Picrophilus torridus (strain ATCC 700027

Query: 1 PGLEHGKVG 9
PG HGK G
Sbjct: 286 PGSLHGKTG 294


>sp|PRIS_ARCFU|DNA primase small subunit PriS|Archaeoglobus fulgidus (strain ATCC

Query: 1 PGLEHGKVG 9
PG HGK G
Sbjct: 257 PGSLHGKTG 265


>sp|Y133_METJA|UNCHARACTERIZED protein MJ0133|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GLEHGKVGE 10
G+E+GK GE
Sbjct: 215 GIEYGKGGE 223


>sp|DPO4_NITMS|DNA polymerase IV|Nitrosopumilus maritimus (strain SCM1)

Query: 1 PGLEHGKV 8
P ++HGK+
Sbjct: 249 PSIQHGKI 256


>sp|KTHY_PYRAB|PROBABLE thymidylate kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 PGLEHGKV 8
P LE GKV
Sbjct: 87 PALEKGKV 94


>sp|Y978_META3|UPF0285 protein Maeo_0978|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PGLEHGKV 8
PGL HG +
Sbjct: 182 PGLLHGAI 189


>sp|KTHY_METBF|PROBABLE thymidylate kinase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PGLEHGKV 8
P LE+GK+
Sbjct: 81 PALENGKI 88


>sp|GGGPS_THEVO|GERANYLGERANYLGLYCERYL phosphate synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PGLEHGKVGE 10
PG+ G+VG+
Sbjct: 133 PGMTVGRVGK 142


>sp|ENDA_SULAC|TRNA-SPLICING endonuclease|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PGLEHG 6
PGLEH
Sbjct: 122 PGLEHA 127


>sp|ENDA_SACI7|TRNA-SPLICING endonuclease|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 PGLEHG 6
PGLEH
Sbjct: 123 PGLEHA 128


>sp|ENDA_SACI2|TRNA-SPLICING endonuclease|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 PGLEHG 6
PGLEH
Sbjct: 123 PGLEHA 128


>sp|DPHB_METM7|DIPHTHINE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 PGLEHGKV 8
PGL +GK+
Sbjct: 212 PGLYYGKI 219


>sp|DPHB_METMP|DIPHTHINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 PGLEHGKV 8
PGL +GK+
Sbjct: 212 PGLYYGKI 219


>sp|AROC_PYRAR|CHORISMATE synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PGLEHGKVG 9
PGLE K+G
Sbjct: 272 PGLETNKIG 280


>sp|DPHB_METM6|DIPHTHINE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 PGLEHGKV 8
PGL +GK+
Sbjct: 212 PGLYYGKI 219


>sp|KTHY_THEGJ|PROBABLE thymidylate kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 PGLEHGKV 8
P LE GKV
Sbjct: 89 PALESGKV 96


>sp|DPHB_METM5|DIPHTHINE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 PGLEHGKV 8
PGL +GK+
Sbjct: 212 PGLYYGKI 219


>sp|NADK_METB6|NAD kinase|Methanoregula boonei (strain DSM 21154

Query: 2 GLEHGKVG 9
G+ HG+VG
Sbjct: 81 GINHGEVG 88


>sp|ENDA_SACI1|TRNA-SPLICING endonuclease|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 PGLEHG 6
PGLEH
Sbjct: 123 PGLEHA 128


>sp|ENDA_SACI4|TRNA-SPLICING endonuclease|Saccharolobus islandicus (strain M.14.25 /

Query: 1 PGLEHG 6
PGLEH
Sbjct: 123 PGLEHA 128


>sp|ENDA_SACI6|TRNA-SPLICING endonuclease|Saccharolobus islandicus (strain M.16.4 /

Query: 1 PGLEHG 6
PGLEH
Sbjct: 123 PGLEHA 128


>sp|ENDA_SACI3|TRNA-SPLICING endonuclease|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 PGLEHG 6
PGLEH
Sbjct: 123 PGLEHA 128


>sp|Y1590_THEKO|UPF0273 protein TK1590|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PGLEHG 6
PG+EHG
Sbjct: 182 PGVEHG 187


>sp|Y778_METJA|UNCHARACTERIZED protein MJ0778|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GLEHGKVG 9
G+EHG VG
Sbjct: 64 GIEHGVVG 71


>sp|Y258_PYRAB|UPF0273 protein PYRAB02580|Pyrococcus abyssi (strain GE5 /

Query: 1 PGLEHG 6
PG+EHG
Sbjct: 182 PGVEHG 187


>sp|Y1931_PYRFU|UPF0273 protein PF1931|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PGLEHG 6
PG+EHG
Sbjct: 182 PGVEHG 187


>sp|AAT_PYRAB|ASPARTATE aminotransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 PGLEHGKVGE 10
PG GK GE
Sbjct: 349 PGSAFGKAGE 358


>sp|Y284_PYRHO|UPF0273 protein PH0284|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PGLEHG 6
PG+EHG
Sbjct: 182 PGVEHG 187


>sp|ENDA_SACS2|TRNA-SPLICING endonuclease|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PGLEHG 6
PGLEH
Sbjct: 123 PGLEHA 128


>sp|DPHB_METVS|DIPHTHINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 PGLEHGKV 8
PGL +GK+
Sbjct: 212 PGLFYGKI 219


>sp|ALF1_HALSA|FRUCTOSE-BISPHOSPHATE aldolase class 1|Halobacterium salinarum (strain ATCC 700922

Query: 2 GLEHGKV 8
GLEHG V
Sbjct: 23 GLEHGPV 29


>sp|ALF1_HALS3|FRUCTOSE-BISPHOSPHATE aldolase class 1|Halobacterium salinarum (strain ATCC 29341

Query: 2 GLEHGKV 8
GLEHG V
Sbjct: 23 GLEHGPV 29


>sp|HMGCS_PYRAB|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 PGLEHGKVG 9
PGL GK+G
Sbjct: 262 PGLLTGKIG 270


>sp|MCRB_METBF|METHYL-COENZYME M reductase subunit beta|Methanosarcina barkeri (strain Fusaro /

Query: 1 PGLEHGKV 8
PG ++GKV
Sbjct: 343 PGCDYGKV 350


>sp|MAP2_METFE|METHIONINE aminopeptidase|Methanothermus fervidus

Query: 2 GLEHGKVGE 10
G+E GK+GE
Sbjct: 136 GVEIGKIGE 144


>sp|PRIS_METBU|DNA primase small subunit PriS|Methanococcoides burtonii (strain DSM

Query: 1 PGLEHGKVG 9
PG HGK G
Sbjct: 310 PGSLHGKSG 318


>sp|MCRB_METTH|METHYL-COENZYME M reductase I subunit|Methanothermobacter thermautotrophicus

Query: 1 PGLEHGKV 8
PG++ GKV
Sbjct: 345 PGVDFGKV 352


>sp|AAT_PYRHO|ASPARTATE aminotransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PGLEHGKVGE 10
PG G++GE
Sbjct: 353 PGTAFGRMGE 362




230|Sequence|1146|1155|GKVGEAGLLS

>sp|END4_NATPD|PROBABLE endonuclease 4|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GKVGEAGL 8
GK+GEAG+
Sbjct: 231 GKIGEAGM 238


>sp|END4_HALWD|PROBABLE endonuclease 4|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GKVGEAGL 8
GK+GE+G+
Sbjct: 230 GKIGESGM 237


>sp|GGGPS_PICTO|GERANYLGERANYLGLYCERYL phosphate synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 GKVGEAGLL 9
G+VGEA L+
Sbjct: 138 GRVGEANLI 146


>sp|TRUD_PYRIL|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum islandicum (strain DSM

Query: 1 GKVGEAGL 8
GKVGEA L
Sbjct: 331 GKVGEAVL 338


>sp|Y855_SACI1|PROTEIN YN1551_0855|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 KVGEAGLL 9
KVGE GL+
Sbjct: 135 KVGEDGLI 142


>sp|Y2104_SACI2|PROTEIN LS215_2104|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 KVGEAGLL 9
KVGE GL+
Sbjct: 135 KVGEDGLI 142


>sp|Y2063_SACI7|PROTEIN YG5714_2063|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 KVGEAGLL 9
KVGE GL+
Sbjct: 135 KVGEDGLI 142


>sp|Y2019_SACI3|PROTEIN M1627_2019|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 KVGEAGLL 9
KVGE GL+
Sbjct: 135 KVGEDGLI 142


>sp|Y1949_SACI6|PROTEIN M164_1949|Saccharolobus islandicus (strain M.16.4 /

Query: 2 KVGEAGLL 9
KVGE GL+
Sbjct: 135 KVGEDGLI 142


>sp|Y1941_SACI4|PROTEIN M1425_1941|Saccharolobus islandicus (strain M.14.25 /

Query: 2 KVGEAGLL 9
KVGE GL+
Sbjct: 135 KVGEDGLI 142


>sp|Y193_SACS2|PROTEIN SSO0193|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 KVGEAGLL 9
KVGE GL+
Sbjct: 135 KVGEDGLI 142


>sp|AATA_THEVO|A-TYPE ATP synthase subunit A|Thermoplasma volcanium (strain ATCC 51530

Query: 2 KVGEAGLL 9
KVGE GL+
Sbjct: 27 KVGEMGLI 34


>sp|URE1_SULTO|UREASE subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GKVGEAGL 8
G+VGE G+
Sbjct: 365 GRVGETGI 372


>sp|AATA_THEAC|A-TYPE ATP synthase subunit A|Thermoplasma acidophilum (strain ATCC

Query: 2 KVGEAGLL 9
KVGE GL+
Sbjct: 27 KVGEMGLI 34


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GKVGEAGLL 9
GKV E GL+
Sbjct: 357 GKVEEVGLI 365


>sp|Y229_SULTO|PROTEIN STK_02290|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 KVGEAGLL 9
KVGE GL+
Sbjct: 139 KVGEDGLI 146


>sp|TRUD_PYRAE|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum aerophilum (strain ATCC

Query: 1 GKVGEAGL 8
GKVGEA L
Sbjct: 331 GKVGEALL 338


>sp|END4_HALSA|PROBABLE endonuclease 4|Halobacterium salinarum (strain ATCC 700922

Query: 1 GKVGEAGL 8
G +GEAG+
Sbjct: 230 GHIGEAGM 237


>sp|END4_HALS3|PROBABLE endonuclease 4|Halobacterium salinarum (strain ATCC 29341

Query: 1 GKVGEAGL 8
G +GEAG+
Sbjct: 230 GHIGEAGM 237


>sp|AATA_METTP|A-TYPE ATP synthase subunit A|Methanothrix thermoacetophila (strain DSM

Query: 3 VGEAGLLS 10
VGE GL+S
Sbjct: 29 VGEEGLMS 36


>sp|Y2580_AERPE|UNCHARACTERIZED protein APE_2580|Aeropyrum pernix (strain ATCC 700893

Query: 1 GKVGEAGL 8
GK+ EAGL
Sbjct: 93 GKIREAGL 100


>sp|AATA_ARCFU|A-TYPE ATP synthase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KVGEAGLL 9
KVGE GL+
Sbjct: 34 KVGEEGLM 41


>sp|RLME_METTH|RIBOSOMAL RNA large subunit methyltransferase|Methanothermobacter

Query: 2 KVGEAGLL 9
KVGE GL+
Sbjct: 64 KVGEEGLV 71




231|Sequence|1151|1160|AGLLSVDCSE

>sp|TSR3_METKA|16S rRNA aminocarboxypropyltransferase|Methanopyrus kandleri (strain

Query: 2 GLLSVDCS 9
GL++VDCS
Sbjct: 61 GLVAVDCS 68


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 3 LLSVDCSE 10
++SVDC E
Sbjct: 809 MVSVDCGE 816




232|Sequence|1156|1165|VDCSEAGPGA

>sp|TOP6A_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VDCSEAGPGA 10
VDC++ G GA
Sbjct: 165 VDCTKLGTGA 174


>sp|RSMA_PYRAE|PROBABLE ribosomal RNA small subunit|Pyrobaculum aerophilum (strain ATCC

Query: 1 VDCSEAGPGA 10
+D E GPGA
Sbjct: 28 LDVIEVGPGA 37


>sp|TIAS_METV3|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanococcus voltae (strain

Query: 2 DCSEAGPG 9
DCS PG
Sbjct: 169 DCSTTNPG 176




233|Sequence|1161|1170|AGPGALGLEA

>sp|ACDB1_METAC|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 1 AGPGALGLE 9
GP +LGLE
Sbjct: 27 GGPKSLGLE 35


>sp|ACDB2_METMA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina mazei

Query: 1 AGPGALGLE 9
GP +LGLE
Sbjct: 28 GGPKSLGLE 36


>sp|ACDB1_METMA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina mazei

Query: 1 AGPGALGLE 9
GP +LGLE
Sbjct: 27 GGPKSLGLE 35


>sp|ACDB1_METTE|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 1 AGPGALGLE 9
GP +LGLE
Sbjct: 27 GGPKSLGLE 35


>sp|ACDB2_METTE|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 1 AGPGALGLE 9
GP +LGLE
Sbjct: 27 GGPKSLGLE 35


>sp|ACDB2_METAC|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 1 AGPGALGLE 9
GP +LGLE
Sbjct: 27 GGPKSLGLE 35


>sp|DPHB_METST|DIPHTHINE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 AGPGALGLEA 10
A PG GL+A
Sbjct: 116 AAPGISGLQA 125


>sp|RS3_HYPBU|SMALL ribosomal subunit protein uS3|Hyperthermus butylicus (strain DSM

Query: 3 PGALGLE 9
PG LG+E
Sbjct: 174 PGVLGIE 180


>sp|DPCKG_AERPE|GTP-DEPENDENT dephospho-CoA kinase|Aeropyrum pernix (strain ATCC 700893

Query: 3 PGALGLEA 10
PG+L LEA
Sbjct: 99 PGSLSLEA 106


>sp|NAOX_METJA|NADH oxidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GPGALGLE 9
G GA+GLE
Sbjct: 156 GAGAIGLE 163


>sp|RISB_AERPE|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 GPGALGLEA 10
GPGA LEA
Sbjct: 110 GPGASRLEA 118




234|Sequence|1166|1175|LGLEAVSDSG

>sp|DCHI_THEKO|DIACETYLCHITOBIOSE deacetylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LGLEAVSDSG 10
LG+EAVS +G
Sbjct: 157 LGIEAVSFAG 166


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LGLEAVSDSG 10
LGLE + D G
Sbjct: 878 LGLEVIPDPG 887


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LGLEAVSDSG 10
LGLE + D G
Sbjct: 878 LGLEVIPDPG 887


>sp|Y2292_ARCFU|UNCHARACTERIZED protein AF_2292|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LGLEAVSD 8
LGLE +SD
Sbjct: 53 LGLEGLSD 60


>sp|HDRA_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanococcus

Query: 2 GLEAVSDSG 10
GLEA D+G
Sbjct: 494 GLEAKKDAG 502




235|Sequence|1171|1180|VSDSGTKAEV

>sp|Y1180_METJA|UNCHARACTERIZED protein MJ1180|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DSGTKAEV 10
D GTKA+V
Sbjct: 120 DKGTKAKV 127


>sp|CS12F_UNCAX|CRISPR-ASSOCIATED endodeoxyribonuclease Cas12f1|Uncultured archaeon

Query: 3 DSGTKAEV 10
D GT+AE+
Sbjct: 268 DEGTEAEI 275




236|Sequence|1176|1185|TKAEVSIQNN

>sp|CAS7_METJA|CRISPR-ASSOCIATED protein Cas7/Cst2/DevR|Methanocaldococcus jannaschii (strain ATCC

Query: 1 TKAEVSIQNN 10
TKA+VSI+N+
Sbjct: 30 TKAKVSIKND 39


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 2 KAEVSIQNN 10
KAE+S +NN
Sbjct: 925 KAEMSAENN 933




237|Sequence|1181|1190|SIQNNKDGTY

>sp|TFE_IGNH4|TRANSCRIPTION factor E|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 IQNNKDGTY 10
I+N DGTY
Sbjct: 69 IRNENDGTY 77


>sp|TOP6B_METMA|TYPE 2 DNA topoisomerase 6|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IQNNKDGT 9
I+NN DGT
Sbjct: 518 IKNNGDGT 525


>sp|HIS2_SULTO|PHOSPHORIBOSYL-ATP pyrophosphatase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 IQNNKDGTY 10
I N K+G+Y
Sbjct: 17 ISNKKEGSY 25


>sp|RL2_NITMS|LARGE ribosomal subunit protein uL2|Nitrosopumilus maritimus (strain

Query: 1 SIQNNKDGT 9
SIQN DGT
Sbjct: 97 SIQNIPDGT 105


>sp|HIS6_METBU|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcoides burtonii

Query: 5 NKDGTY 10
N+DGTY
Sbjct: 196 NRDGTY 201


>sp|RL2_CENSY|LARGE ribosomal subunit protein uL2|Cenarchaeum symbiosum (strain A)

Query: 1 SIQNNKDGT 9
S+QN DGT
Sbjct: 96 SVQNIPDGT 104


>sp|Y925_METM7|UNCHARACTERIZED solute-binding protein MmarC7_0925|Methanococcus maripaludis

Query: 2 IQNNKDGTY 10
+ N DGTY
Sbjct: 191 VDENADGTY 199


>sp|MCRY_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 3 QNNKDGT 9
+N KDGT
Sbjct: 258 ENGKDGT 264


>sp|Y1652_METMP|UNCHARACTERIZED solute-binding protein MMP1652|Methanococcus maripaludis (strain

Query: 2 IQNNKDGTY 10
+ N DGTY
Sbjct: 179 VNENADGTY 187


>sp|PURO_METST|IMP cyclohydrolase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 SIQNNKDGTY 10
SI ++KDG Y
Sbjct: 8 SIGSSKDGVY 17




238|Sequence|1186|1195|KDGTYAVTYV

>sp|GCSPB_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 1 KDGTYAVTYV 10
KDG Y+++Y+
Sbjct: 308 KDGKYSLSYI 317


>sp|AATI_THEKO|A-TYPE ATP synthase subunit I|Thermococcus kodakarensis (strain ATCC

Query: 2 DGTYAVTYV 10
DGTY Y+
Sbjct: 407 DGTYKFAYI 415


>sp|SECF_HALVD|PROTEIN-EXPORT membrane protein SecF|Haloferax volcanii (strain ATCC 29605

Query: 2 DGTYAVTY 9
DGTY VT+
Sbjct: 85 DGTYVVTF 92


>sp|Y810_METJA|PROTEIN MJ0810|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KDGTYAVTY 9
++GT+AV Y
Sbjct: 7 EEGTFAVRY 15


>sp|Y1498_SULAC|PARB-LIKE protein Saci_1498|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 DGTYAVTY 9
DG Y V+Y
Sbjct: 107 DGKYCVSY 114


>sp|RL2_KORCO|LARGE ribosomal subunit protein uL2|Korarchaeum cryptofilum (strain OPF8)

Query: 1 KDGTYAVTY 9
+ GTYA+ +
Sbjct: 122 RSGTYAIVF 130


>sp|Y240_METJA|PUTATIVE adenylate cyclase MJ0240|Methanocaldococcus jannaschii (strain

Query: 1 KDGTYAVTY 9
+DG + VTY
Sbjct: 57 EDGNFFVTY 65




239|Sequence|1191|1200|AVTYVPLTAG

>sp|TRUD_METKA|PROBABLE tRNA pseudouridine synthase D|Methanopyrus kandleri (strain AV19

Query: 3 TYVPLT 8
TY+PLT
Sbjct: 8 TYIPLT 13


>sp|Y795_METJA|UNCHARACTERIZED protein MJ0795|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 TYVPLT 8
TY+PLT
Sbjct: 198 TYIPLT 203


>sp|RS7_METJA|SMALL ribosomal subunit protein uS7|Methanocaldococcus jannaschii

Query: 4 YVPLTAG 10
YVP TAG
Sbjct: 34 YVPHTAG 40


>sp|PRIS_HALSA|DNA primase small subunit PriS|Halobacterium salinarum (strain ATCC

Query: 4 YVPLTAG 10
Y+P TAG
Sbjct: 35 YIPWTAG 41


>sp|PRIS_HALS3|DNA primase small subunit PriS|Halobacterium salinarum (strain ATCC

Query: 4 YVPLTAG 10
Y+P TAG
Sbjct: 35 YIPWTAG 41




240|Sequence|1196|1205|PLTAGMYTLT

>sp|Y1865_ARCFU|UNCHARACTERIZED protein AF_1865|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LTAGMYTLT 10
LTAG YT T
Sbjct: 168 LTAGAYTAT 176


>sp|TRPG_THEKO|ANTHRANILATE synthase component 2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PLTAGMY 7
PLTAG Y
Sbjct: 119 PLTAGRY 125


>sp|Y290_METJA|UNCHARACTERIZED protein MJ0290|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 TAGMYTLT 10
T G+YTLT
Sbjct: 183 TDGVYTLT 190


>sp|EF1B_METM6|ELONGATION factor 1-beta|Methanococcus maripaludis (strain C6 /

Query: 1 PLTAGMYTL 9
PL G+YT+
Sbjct: 44 PLAFGLYTV 52


>sp|EF1B_METM5|ELONGATION factor 1-beta|Methanococcus maripaludis (strain C5 /

Query: 1 PLTAGMYTL 9
PL G+YT+
Sbjct: 44 PLAFGLYTV 52


>sp|RS7_METJA|SMALL ribosomal subunit protein uS7|Methanocaldococcus jannaschii

Query: 1 PLTAGMYT 8
P TAG YT
Sbjct: 36 PHTAGRYT 43


>sp|EF1B_METM7|ELONGATION factor 1-beta|Methanococcus maripaludis (strain C7 /

Query: 1 PLTAGMYTL 9
PL G+YT+
Sbjct: 44 PLAFGLYTV 52


>sp|EF1B_METMP|ELONGATION factor 1-beta|Methanococcus maripaludis (strain DSM 14266

Query: 1 PLTAGMYTL 9
PL G+YT+
Sbjct: 44 PLAFGLYTV 52


>sp|Y2114_ARCFU|UNCHARACTERIZED protein AF_2114|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LTAGMYTLT 10
L AG YTLT
Sbjct: 60 LPAGNYTLT 68




241|Sequence|1201|1210|MYTLTMKYGG

>sp|SYR_THEAC|ARGININE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 MYTLTMKYGG 10
+YT +KYGG
Sbjct: 164 LYTAYIKYGG 173


>sp|CBIJ_METJA|COBALT-PRECORRIN-6A reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MYTLTMKYGG 10
+YT T YGG
Sbjct: 28 LYTSTTDYGG 37


>sp|CMR2_SACS2|CRISPR system CMR subunit Cmr2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 MYTLTMKYGG 10
+YTL + YGG
Sbjct: 1034 VYTLRIIYGG 1043


>sp|SYV_THEVO|VALINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 MYTLTMKYGG 10
+Y +T KYG
Sbjct: 532 IYAITDKYGA 541


>sp|AROC_THEAC|CHORISMATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 YTLTMKYG 9
YT+ +KYG
Sbjct: 107 YTMFLKYG 114


>sp|ACKA_METAC|ACETATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 YTLTMKYG 9
YTL KYG
Sbjct: 166 YTLYEKYG 173


>sp|PDXT_THEAC|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Thermoplasma acidophilum

Query: 1 MYTLTMKYG 9
+Y LT++YG
Sbjct: 56 IYKLTLEYG 64


>sp|GGGPS_META3|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 MYTLTMKYGG 10
MY L+ KY G
Sbjct: 156 MYCLSAKYFG 165




242|Sequence|1206|1215|MKYGGELVPH

>sp|SYT_METTP|THREONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 MKYGGELVP 9
MK GGE+VP
Sbjct: 162 MKKGGEMVP 170


>sp|FTR_METBU|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 3 YGGELVPH 10
YGG L PH
Sbjct: 282 YGGSLGPH 289


>sp|TPSP_THETK|BIFUNCTIONAL trehalose-6-phosphate synthase/phosphatase|Thermoproteus tenax

Query: 1 MKYGGELVPH 10
+ Y G LVPH
Sbjct: 502 LDYDGTLVPH 511


>sp|TRPB2_METTH|TRYPTOPHAN synthase beta chain 2|Methanothermobacter thermautotrophicus

Query: 3 YGGELVP 9
YGGE+VP
Sbjct: 175 YGGEVVP 181


>sp|MUTL_METLZ|DNA mismatch repair protein MutL|Methanocorpusculum labreanum (strain

Query: 3 YGGELVPH 10
+GGEL+ H
Sbjct: 131 HGGELISH 138


>sp|TRPB1_METMA|TRYPTOPHAN synthase beta chain 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KYGGELVPH 10
KYGG+ VP
Sbjct: 17 KYGGQYVPE 25


>sp|TRPB1_METAC|TRYPTOPHAN synthase beta chain 1|Methanosarcina acetivorans (strain ATCC

Query: 2 KYGGELVPH 10
KYGG+ VP
Sbjct: 17 KYGGQYVPE 25


>sp|SYC_METAC|CYSTEINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 KYGGELV 8
KYGGE+V
Sbjct: 287 KYGGEVV 293


>sp|SYC_METBF|CYSTEINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 KYGGELV 8
KYGGE+V
Sbjct: 287 KYGGEVV 293


>sp|MER_METJA|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MKYGGELVPH 10
MK+G E VP+
Sbjct: 1 MKFGIEFVPN 10


>sp|RNZ_THESM|RIBONUCLEASE Z|Thermococcus sibiricus (strain DSM 12597

Query: 1 MKYGGELV 8
+KYGGE++
Sbjct: 25 LKYGGEII 32


>sp|RS7_HALWD|SMALL ribosomal subunit protein uS7|Haloquadratum walsbyi (strain DSM

Query: 1 MKYGGELVPH 10
+KYGG VP
Sbjct: 151 LKYGGISVPQ 160


>sp|RS7_HALSA|SMALL ribosomal subunit protein uS7|Halobacterium salinarum (strain ATCC

Query: 1 MKYGGELVPH 10
+KYGG VP
Sbjct: 134 LKYGGISVPQ 143


>sp|RS7_HALS3|SMALL ribosomal subunit protein uS7|Halobacterium salinarum (strain ATCC

Query: 1 MKYGGELVPH 10
+KYGG VP
Sbjct: 134 LKYGGISVPQ 143


>sp|RS7_HALMO|SMALL ribosomal subunit protein uS7|Halococcus morrhuae (Micrococcus

Query: 1 MKYGGELVPH 10
+KYGG VP
Sbjct: 127 LKYGGISVPQ 136


>sp|MER_METAC|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 MKYGGELVP 9
MK+G E VP
Sbjct: 1 MKFGIEFVP 9


>sp|MER_ARCFU|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MKYGGELVP 9
MK+G E VP
Sbjct: 1 MKFGIEFVP 9


>sp|MER_METMA|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 MKYGGELVP 9
MK+G E VP
Sbjct: 1 MKFGIEFVP 9


>sp|COBD_METVS|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus vannielii (strain

Query: 3 YGGELVP 9
YGG++VP
Sbjct: 227 YGGKIVP 233


>sp|MER_METBF|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanosarcina barkeri (strain Fusaro /

Query: 1 MKYGGELVP 9
MK+G E VP
Sbjct: 1 MKFGIEFVP 9


>sp|HISX_METMA|HISTIDINOL dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 MKYGGELVP 9
M YG E VP
Sbjct: 196 MAYGTETVP 204


>sp|MER_METTM|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 MKYGGELVPH 10
MK+G E VP+
Sbjct: 1 MKFGIEFVPN 10


>sp|MER_METTH|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 MKYGGELVPH 10
MK+G E VP+
Sbjct: 1 MKFGIEFVPN 10


>sp|SYE_THEAC|GLUTAMATE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 KYGGELV 8
+YGGEL+
Sbjct: 125 RYGGELI 131


>sp|T2MW_METWO|TYPE II restriction enzyme MwoI|Methanothermobacter wolfeii

Query: 5 GELVPH 10
GEL PH
Sbjct: 291 GELAPH 296


>sp|CAS8B_HALVD|CRISPR-ASSOCIATED protein Cas8b|Haloferax volcanii (strain ATCC 29605

Query: 4 GGELVPH 10
GG+L PH
Sbjct: 508 GGDLPPH 514


>sp|KGSDH_SACS2|2,5-DIOXOPENTANOATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 YGGELVP 9
YGG ++P
Sbjct: 349 YGGNIIP 355


>sp|TRPB_HALVD|TRYPTOPHAN synthase beta chain|Haloferax volcanii (strain ATCC 29605

Query: 3 YGGELVP 9
YGG+ VP
Sbjct: 10 YGGQYVP 16


>sp|HACA_METJA|METHANOGEN homoaconitase large subunit|Methanocaldococcus jannaschii (strain

Query: 1 MKYGGELVPH 10
++YGGE+V +
Sbjct: 189 IEYGGEVVKN 198


>sp|TRPB_HALSA|TRYPTOPHAN synthase beta chain|Halobacterium salinarum (strain ATCC 700922

Query: 3 YGGELVP 9
YGG+ VP
Sbjct: 18 YGGQYVP 24


>sp|TRPB_HALS3|TRYPTOPHAN synthase beta chain|Halobacterium salinarum (strain ATCC 29341

Query: 3 YGGELVP 9
YGG+ VP
Sbjct: 18 YGGQYVP 24


>sp|LYSZ_PYRIL|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrobaculum islandicum

Query: 3 YGGELVPH 10
GG +VPH
Sbjct: 192 IGGRVVPH 199


>sp|TRPB2_METTM|TRYPTOPHAN synthase beta chain 2|Methanothermobacter marburgensis (strain

Query: 2 KYGGELVP 9
KYGG VP
Sbjct: 7 KYGGIFVP 14


>sp|TRPB1_METTH|TRYPTOPHAN synthase beta chain 1|Methanothermobacter thermautotrophicus

Query: 2 KYGGELVP 9
KYGG VP
Sbjct: 9 KYGGIFVP 16


>sp|TRPB1_THEKO|TRYPTOPHAN synthase beta chain 1|Thermococcus kodakarensis (strain ATCC

Query: 2 KYGGELVPH 10
++GG+ VP
Sbjct: 8 RFGGQFVPE 16


>sp|TRPB1_PYRAB|TRYPTOPHAN synthase beta chain 1|Pyrococcus abyssi (strain GE5 /

Query: 2 KYGGELVPH 10
K+GG+ VP
Sbjct: 5 KFGGQYVPE 13


>sp|Y2106_PYRCJ|UPF0179 protein Pcal_2106|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 GGELVP 9
GGE+VP
Sbjct: 64 GGEMVP 69


>sp|TRPB_METJA|TRYPTOPHAN synthase beta chain|Methanocaldococcus jannaschii (strain ATCC

Query: 3 YGGELVPH 10
YGG+ VP
Sbjct: 21 YGGKFVPE 28


>sp|KAE1_CALMQ|TRNA N6-adenosine threonylcarbamoyltransferase|Caldivirga maquilingensis

Query: 1 MKYGGELVP 9
+KYG LVP
Sbjct: 97 IKYGKPLVP 105


>sp|Y779_METJA|UNCHARACTERIZED protein MJ0779|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KYGGEL 7
KYGG+L
Sbjct: 165 KYGGDL 170


>sp|TRPB_METKA|TRYPTOPHAN synthase beta chain|Methanopyrus kandleri (strain AV19 /

Query: 2 KYGGELVPH 10
+YGG VP
Sbjct: 13 EYGGRFVPE 21


>sp|TRPB_META3|TRYPTOPHAN synthase beta chain|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 KYGGELVPH 10
+YGG+ VP
Sbjct: 7 EYGGQYVPE 15


>sp|CYAS_METB6|CYSTEATE synthase|Methanoregula boonei (strain DSM 21154

Query: 4 GGELVP 9
GGE+VP
Sbjct: 12 GGEIVP 17


>sp|SYE_PICTO|GLUTAMATE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 KYGGELV 8
+YGG+L+
Sbjct: 126 RYGGDLI 132


>sp|TRPB2_ARCFU|TRYPTOPHAN synthase beta chain 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 YGGELVP 9
+GGE++P
Sbjct: 180 WGGEVIP 186




243|Sequence|1211|1220|ELVPHFPARV

>sp|PSTB_PYRAE|PHOSPHATE import ATP-binding protein PstB|Pyrobaculum aerophilum (strain ATCC

Query: 2 LVPHFPAR 9
LV HFPA+
Sbjct: 200 LVTHFPAQ 207


>sp|PGMMM_THEKO|PHOSPHOGLUCOMUTASE/PHOSPHOMANNOMUTASE kodakarensis (strain ATCC BAA-918

Query: 5 HFPAR 9
HFPAR
Sbjct: 211 HFPAR 215


>sp|GLMM_METMA|PROBABLE phosphoglucosamine mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 HFPAR 9
HFPAR
Sbjct: 197 HFPAR 201


>sp|GLMM_METBF|PROBABLE phosphoglucosamine mutase|Methanosarcina barkeri (strain Fusaro /

Query: 5 HFPAR 9
HFPAR
Sbjct: 197 HFPAR 201


>sp|GLMM_METAC|PROBABLE phosphoglucosamine mutase|Methanosarcina acetivorans (strain ATCC

Query: 5 HFPAR 9
HFPAR
Sbjct: 197 HFPAR 201


>sp|RS19_METB6|SMALL ribosomal subunit protein uS19|Methanoregula boonei (strain DSM

Query: 1 ELVPHFPAR 9
EL+P PAR
Sbjct: 35 ELIPLMPAR 43


>sp|UPP_PYRIL|URACIL phosphoribosyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 ELVPHFPAR 9
ELV +FP R
Sbjct: 42 ELVRYFPTR 50


>sp|CDC62_AERPE|ORC1-TYPE DNA replication protein 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 LVPHFPA 8
L PH PA
Sbjct: 384 LAPHLPA 390


>sp|TPSP_THETK|BIFUNCTIONAL trehalose-6-phosphate synthase/phosphatase|Thermoproteus tenax

Query: 2 LVPHFP 7
LVPH+P
Sbjct: 508 LVPHYP 513


>sp|HIS7_CALMQ|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 ELVPHF 6
E+VPHF
Sbjct: 132 EMVPHF 137


>sp|PRIS_METB6|DNA primase small subunit PriS|Methanoregula boonei (strain DSM 21154

Query: 2 LVPHFPAR 9
LVP +PAR
Sbjct: 188 LVPGWPAR 195


>sp|SYL_NANEQ|LEUCINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 ELVPHFPAR 9
ELVP PA+
Sbjct: 361 ELVPVLPAK 369


>sp|RNP4_PYRAB|RIBONUCLEASE P protein component 4|Pyrococcus abyssi (strain GE5 /

Query: 2 LVPHFPARV 10
LVP F ARV
Sbjct: 71 LVPGFNARV 79


>sp|MER_METKA|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanopyrus kandleri (strain AV19 /

Query: 1 ELVPHF 6
E++PHF
Sbjct: 342 EVIPHF 347


>sp|RNJ_PYRAB|RIBONUCLEASE J|Pyrococcus abyssi (strain GE5 /

Query: 1 ELVPHFP 7
+L PH+P
Sbjct: 95 KLAPHYP 101


>sp|RS19_METMJ|SMALL ribosomal subunit protein uS19|Methanoculleus marisnigri (strain

Query: 1 ELVPHFPARV 10
EL+P PAR
Sbjct: 33 ELLPLMPARA 42


>sp|ARTA_HALVD|ARCHAEOSORTASE A|Haloferax volcanii (strain ATCC 29605

Query: 1 ELVPHF 6
+L+PHF
Sbjct: 48 QLIPHF 53




244|Sequence|1216|1225|FPARVKVEPA

>sp|Y1637_METJA|UNCHARACTERIZED protein MJ1637|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 ARVKVEP 9
AR+K+EP
Sbjct: 95 ARLKIEP 101


>sp|RL6_METAR|LARGE ribosomal subunit protein uL6|Methanocella arvoryzae (strain DSM

Query: 1 FPARVKVE 8
FP +VKVE
Sbjct: 95 FPIQVKVE 102


>sp|Y1033_PYRHO|UPF0310 protein PH1033|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FPARVKVEP 9
+P RVK++P
Sbjct: 88 YPYRVKIKP 96


>sp|Y2356_ARCFU|UPF0310 protein AF_2356|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FPARVKVEP 9
FP R+K++P
Sbjct: 88 FPLRIKLKP 96


>sp|RL6_METMA|LARGE ribosomal subunit protein uL6|Methanosarcina mazei (strain ATCC

Query: 1 FPARVKVE 8
FP +VKVE
Sbjct: 95 FPMQVKVE 102


>sp|RL6_NANEQ|LARGE ribosomal subunit protein uL6|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 FPARVKVE 8
FP RVK+E
Sbjct: 96 FPMRVKLE 103


>sp|Y2595_SACS2|UPF0310 protein SSO2595|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 RVKVEP 9
RVKVEP
Sbjct: 86 RVKVEP 91


>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 2 PARVKVEPA 10
PA ++VEP
Sbjct: 560 PAHLRVEPG 568


>sp|Y875_PYRAB|UPF0310 protein PYRAB08750|Pyrococcus abyssi (strain GE5 /

Query: 1 FPARVKVEP 9
+P RVK+ P
Sbjct: 86 YPIRVKIRP 94


>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PARVKVEPA 10
PA ++VEP
Sbjct: 691 PAHLRVEPG 699


>sp|Y474_KORCO|UPF0310 protein Kcr_0474|Korarchaeum cryptofilum (strain OPF8)

Query: 1 FPARVKVEP 9
FP RV++ P
Sbjct: 88 FPLRVRLRP 96


>sp|RS19_HALMA|SMALL ribosomal subunit protein uS19|Haloarcula marismortui (strain ATCC

Query: 4 RVKVEP 9
RVKVEP
Sbjct: 99 RVKVEP 104




245|Sequence|1221|1230|KVEPAVDTSR

>sp|TRUA_NATPD|TRNA pseudouridine synthase A|Natronomonas pharaonis (strain ATCC 35678

Query: 3 EPAVDTSR 10
EP+ DT+R
Sbjct: 117 EPSADTTR 124




246|Sequence|1226|1235|VDTSRIKVFG

>sp|TRIC_SULTO|PUTATIVE Tricorn-like protease C-terminal subunit|Sulfurisphaera tokodaii

Query: 1 VDTSRIKVF 9
VD SRIKV+
Sbjct: 465 VDLSRIKVY 473


>sp|Y534_METJA|UNCHARACTERIZED protein MJ0534|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VDTSRIKVF 9
+DT+RIK F
Sbjct: 50 IDTTRIKYF 58


>sp|Y1275_METVS|UNCHARACTERIZED protein Mevan_1275|Methanococcus vannielii (strain ATCC 35089

Query: 2 DTSRIKVFG 10
+++RIK+FG
Sbjct: 43 NSARIKIFG 51


>sp|PELO_METLZ|PROTEIN pelota homolog|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 DTSRIKVFG 10
++SR++VFG
Sbjct: 79 ESSRLRVFG 87


>sp|PURP_PYRAR|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum arsenaticum (strain DSM

Query: 4 SRIKVFG 10
SRI+VFG
Sbjct: 199 SRIEVFG 205


>sp|TRI_SACS2|TRICORN protease homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VDTSRIKVF 9
+D SR+KV+
Sbjct: 682 IDLSRVKVY 690


>sp|APGM_METS5|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Metallosphaera sedula (strain ATCC 51363

Query: 2 DTSRIKVFG 10
DTS + +FG
Sbjct: 60 DTSHLAIFG 68


>sp|APGM_SACS2|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus solfataricus (strain ATCC

Query: 2 DTSRIKVFG 10
DTS + +FG
Sbjct: 60 DTSHLSIFG 68


>sp|APGM_SACI1|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain

Query: 2 DTSRIKVFG 10
DTS + +FG
Sbjct: 60 DTSHLSIFG 68


>sp|APGM_SACI7|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain

Query: 2 DTSRIKVFG 10
DTS + +FG
Sbjct: 60 DTSHLSIFG 68


>sp|APGM_SACI6|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 DTSRIKVFG 10
DTS + +FG
Sbjct: 60 DTSHLSIFG 68


>sp|APGM_SACI4|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.14.25

Query: 2 DTSRIKVFG 10
DTS + +FG
Sbjct: 60 DTSHLSIFG 68


>sp|APGM_SACI3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.16.27)

Query: 2 DTSRIKVFG 10
DTS + +FG
Sbjct: 60 DTSHLSIFG 68


>sp|APGM_SACI2|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain L.S.2.15

Query: 2 DTSRIKVFG 10
DTS + +FG
Sbjct: 60 DTSHLSIFG 68


>sp|Y835_METJA|UNCHARACTERIZED protein MJ0835|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VDTSRIKVF 9
VDTS+IK
Sbjct: 2 VDTSKIKAL 10


>sp|RS7_HALMA|SMALL ribosomal subunit protein uS7|Haloarcula marismortui (strain ATCC

Query: 2 DTSRIKVFG 10
+T+R K+FG
Sbjct: 20 ETARAKLFG 28


>sp|KDGK_SACS2|2-DEHYDRO-3-DEOXYGLUCONOKINASE/2-DEHYDRO-3-DEOXYGALACTONOKINASE solfataricus (strain ATCC 35092

Query: 1 VDTSRIKV 8
+DTS IKV
Sbjct: 74 IDTSHIKV 81


>sp|APGM_SULAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Sulfolobus acidocaldarius (strain ATCC

Query: 2 DTSRIKVFG 10
DTS + +FG
Sbjct: 60 DTSHLAIFG 68


>sp|DN7B_SACSH|DNA-BINDING protein 7b|Saccharolobus shibatae (strain ATCC 51178

Query: 1 VDTSRIK 7
VDTS+IK
Sbjct: 15 VDTSKIK 21


>sp|DN7B_SACI0|DNA-BINDING protein 7b|Saccharolobus islandicus (strain HVE10/4) (Sulfolobus

Query: 1 VDTSRIK 7
VDTS+IK
Sbjct: 15 VDTSKIK 21




247|Sequence|1231|1240|IKVFGPGIEG

>sp|CDC6_THEVO|ORC1-TYPE DNA replication protein|Thermoplasma volcanium (strain ATCC 51530

Query: 2 KVFGPGI 8
KVFGPG+
Sbjct: 220 KVFGPGV 226


>sp|HEM1_NATPD|GLUTAMYL-TRNA reductase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 IKVFGPGIE 9
+++FGPG+E
Sbjct: 408 LQLFGPGLE 416


>sp|Y574_METTH|UNCHARACTERIZED protein MTH_574|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 KVFGPGIEG 10
KV PGIEG
Sbjct: 105 KVKAPGIEG 113


>sp|AATI_THEAC|A-TYPE ATP synthase subunit I|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IKVFGPGIEG 10
+ VF PGI+G
Sbjct: 588 LAVFEPGIQG 597


>sp|CMR1A_PYRFU|CRISPR system Cmr subunit Cmr1-1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IKVFGPG 7
++VFGPG
Sbjct: 222 VEVFGPG 228


>sp|IF2P_METMA|PROBABLE translation initiation factor IF-2|Methanosarcina mazei (strain

Query: 1 IKVFGPGIEG 10
+K+ PG+EG
Sbjct: 309 VKISAPGLEG 318


>sp|IF2P_METBF|PROBABLE translation initiation factor IF-2|Methanosarcina barkeri (strain

Query: 1 IKVFGPGIEG 10
+K+ PG+EG
Sbjct: 309 VKISAPGLEG 318


>sp|FEN_HALSA|FLAP endonuclease 1|Halobacterium salinarum (strain ATCC 700922

Query: 4 FGPGIEG 10
F PGI+G
Sbjct: 227 FNPGIDG 233


>sp|FEN_HALS3|FLAP endonuclease 1|Halobacterium salinarum (strain ATCC 29341

Query: 4 FGPGIEG 10
F PGI+G
Sbjct: 227 FNPGIDG 233


>sp|HISX_PICTO|HISTIDINOL dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 2 KVFGPG 7
K+FGPG
Sbjct: 175 KIFGPG 180


>sp|DADD_METBU|5'-DEOXYADENOSINE deaminase|Methanococcoides burtonii (strain DSM 6242

Query: 1 IKVFGPGI 8
I FGPG+
Sbjct: 237 IDFFGPGV 244


>sp|HISX_THEKO|HISTIDINOL dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 KVFGPG 7
K+FGPG
Sbjct: 176 KIFGPG 181


>sp|GVPF1_HALSA|GAS vesicle protein F1|Halobacterium salinarum (strain ATCC 700922

Query: 1 IKVFGPG 7
+K+ GPG
Sbjct: 116 VKILGPG 122


>sp|G1PDH_PYRAE|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 IKVFGPG 7
I +FGPG
Sbjct: 12 IVIFGPG 18


>sp|DHYS_PYRCJ|PROBABLE deoxyhypusine synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 IKVFGPGI 8
+KVF PGI
Sbjct: 161 VKVFVPGI 168


>sp|ACD2_ARCFU|ACETATE--COA ligase [ADP-forming] II|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IKVFGPGIEG 10
I++FGP G
Sbjct: 339 IRIFGPNTTG 348


>sp|AGL8_HALVD|LOW-SALT glycan biosynthesis protein Agl8|Haloferax volcanii (strain ATCC

Query: 1 IKVFGPGIEG 10
+KVF P EG
Sbjct: 134 LKVFEPPYEG 143


>sp|PRNK_PYRHO|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase PH0197|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 VFGPGIE 9
++GPG+E
Sbjct: 146 IYGPGVE 152


>sp|HISX_PYRFU|HISTIDINOL dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KVFGPG 7
K+FGPG
Sbjct: 175 KIFGPG 180


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 IKVFGPGIEG 10
++V PGIEG
Sbjct: 626 VQVGQPGIEG 635


>sp|IF2P_METB6|PROBABLE translation initiation factor IF-2|Methanoregula boonei (strain DSM

Query: 1 IKVFGPGIE 9
IKV PG+E
Sbjct: 307 IKVSAPGLE 315


>sp|GLMS_AERPE|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Aeropyrum pernix (strain ATCC 700893

Query: 2 KVFGPGIEG 10
KV+ PG++G
Sbjct: 339 KVYTPGVDG 347


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 3 VFGPGI 8
V+GPGI
Sbjct: 779 VYGPGI 784


>sp|EF1A_METAR|ELONGATION factor 1-alpha|Methanocella arvoryzae (strain DSM 22066

Query: 3 VFGPGIEG 10
+F PGI+G
Sbjct: 258 IFRPGIDG 265


>sp|RAMA_METBA|[CO(II) methylated amine-specific corrinoid protein]|Methanosarcina barkeri

Query: 3 VFGPGIE 9
+ GPGIE
Sbjct: 291 ILGPGIE 297


>sp|AROA_THEKO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 IKVFGPGIEG 10
I+ FG G++G
Sbjct: 54 IRSFGAGVDG 63


>sp|CARB_SULAC|CARBAMOYL phosphate synthase large chain|Sulfolobus acidocaldarius (strain

Query: 1 IKVFGPGIEG 10
+KV G IEG
Sbjct: 111 VKVLGTPIEG 120


>sp|IF2P_METAC|PROBABLE translation initiation factor IF-2|Methanosarcina acetivorans

Query: 1 IKVFGPGIEG 10
+K+ PG++G
Sbjct: 315 VKISAPGLDG 324


>sp|IF2P_METTH|PROBABLE translation initiation factor IF-2|Methanothermobacter

Query: 1 IKVFGPGIE 9
IK+ PGI+
Sbjct: 308 IKIVAPGID 316


>sp|Y1137_METJA|UNCHARACTERIZED protein MJ1137|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IKVFGPGIEG 10
IK FG +EG
Sbjct: 116 IKYFGKTVEG 125




248|Sequence|1236|1245|PGIEGKDVFR

>sp|RNP3_METMA|RIBONUCLEASE P protein component 3|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PGIEGKDVFR 10
P IEG +VFR
Sbjct: 53 PSIEGFEVFR 62


>sp|LEUC_HALVD|3-ISOPROPYLMALATE dehydratase large subunit|Haloferax volcanii (strain ATCC 29605

Query: 1 PGIEGKDV 8
PG+E KDV
Sbjct: 177 PGVEAKDV 184


>sp|Y1873_ARCFU|UNCHARACTERIZED protein AF_1873|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 IEGKDVF 9
I+GKDVF
Sbjct: 114 IKGKDVF 120


>sp|ACDE2_METAC|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanosarcina

Query: 1 PGIEGKDV 8
PG GKDV
Sbjct: 73 PGFVGKDV 80


>sp|SYM_PYRAR|METHIONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PGIEGKDVF 9
PG EGK ++
Sbjct: 243 PGAEGKTIY 251


>sp|LEUC_CALMQ|3-ISOPROPYLMALATE dehydratase large subunit|Caldivirga maquilingensis (strain ATCC

Query: 1 PGIEGKDV 8
PG+ GKDV
Sbjct: 168 PGVYGKDV 175


>sp|LEUC_PYRNV|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PGIEGKDV 8
PG+ GKDV
Sbjct: 167 PGVMGKDV 174


>sp|LEUC_PYRIL|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PGIEGKDV 8
PG+ GKDV
Sbjct: 167 PGVMGKDV 174


>sp|LEUC_PYRAR|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PGIEGKDV 8
PG+ GKDV
Sbjct: 167 PGVMGKDV 174


>sp|SYM_PYRCJ|METHIONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 PGIEGKDVF 9
PG EGK ++
Sbjct: 243 PGAEGKTIY 251


>sp|SYM_PYRAE|METHIONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PGIEGKDVF 9
PG EGK ++
Sbjct: 243 PGAEGKTIY 251


>sp|SYM_METS5|METHIONINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 PGIEGKDVF 9
PG EGK ++
Sbjct: 243 PGAEGKTIY 251


>sp|SYM_PYRNV|METHIONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PGIEGKDVF 9
PG EGK ++
Sbjct: 243 PGAEGKTIY 251


>sp|COOS_ARCFU|CARBON monoxide dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GIEGKDV 8
GIEG+DV
Sbjct: 128 GIEGEDV 134


>sp|RNP3_METAC|RIBONUCLEASE P protein component 3|Methanosarcina acetivorans (strain ATCC

Query: 1 PGIEGKDVFR 10
P IEG +VFR
Sbjct: 53 PFIEGFEVFR 62


>sp|THIOL_METJA|ACETYL-COA acetyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GIEGKDV 8
GI+GKD+
Sbjct: 38 GIDGKDI 44


>sp|PSTB_METBF|PHOSPHATE import ATP-binding protein PstB|Methanosarcina barkeri (strain

Query: 3 IEGKDVF 9
IEGKD++
Sbjct: 76 IEGKDIY 82


>sp|SYM_PYRIL|METHIONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PGIEGKDVF 9
PG EGK ++
Sbjct: 243 PGAEGKTIY 251


>sp|SYM_CALMQ|METHIONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 PGIEGKDVF 9
PG EGK ++
Sbjct: 256 PGAEGKTIY 264


>sp|DPOL_ARCFU|DNA polymerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 IEGKDVFR 10
IE KD++R
Sbjct: 304 IEAKDIYR 311


>sp|SYM_HYPBU|METHIONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 PGIEGKDVF 9
PG EGK ++
Sbjct: 242 PGAEGKTIY 250


>sp|SYM_IGNH4|METHIONINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 PGIEGKDVF 9
PG EGK ++
Sbjct: 242 PGAEGKTIY 250


>sp|SYM_KORCO|METHIONINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 PGIEGKDVF 9
PG EGK ++
Sbjct: 241 PGSEGKTIY 249


>sp|SURE_METST|5'-NUCLEOTIDASE SurE|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 GIEGKDV 8
GIEG DV
Sbjct: 221 GIEGTDV 227


>sp|PCNA_HALMA|DNA polymerase sliding clamp|Haloarcula marismortui (strain ATCC 43049

Query: 3 IEGKDVFR 10
IEGKD+ R
Sbjct: 133 IEGKDIDR 140


>sp|DNLI_METHJ|DNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PGIEGKD 7
PG+ GKD
Sbjct: 402 PGVRGKD 408


>sp|Y987_METAR|UNCHARACTERIZED protein UNCMA_09870|Methanocella arvoryzae (strain DSM 22066

Query: 2 GIEGKDV 8
GIEG+D+
Sbjct: 35 GIEGRDL 41


>sp|PURA_METST|ADENYLOSUCCINATE synthetase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 EGKDVF 9
EGKDVF
Sbjct: 169 EGKDVF 174


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 EGKDVFR 10
EGK++FR
Sbjct: 1115 EGKEIFR 1121


>sp|GLCD2_SACS2|GLUCOSE 1-dehydrogenase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PGIEGKDV 8
PG+E KDV
Sbjct: 11 PGVEIKDV 18


>sp|APGM2_ARCFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Archaeoglobus fulgidus (strain ATCC

Query: 2 GIEGKDVFR 10
G++GK VFR
Sbjct: 84 GVKGKLVFR 92


>sp|NAOX_METJA|NADH oxidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PGIEGKDV 8
P IEGKD+
Sbjct: 118 PPIEGKDL 125


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 1 PGIEGKD 7
PGIEG++
Sbjct: 631 PGIEGRE 637


>sp|HPRT_METMA|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GIEGKDVF 9
G+E KDVF
Sbjct: 179 GVEIKDVF 186


>sp|DNLI_METTH|DNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PGIEGKDVFR 10
PGI GK + +
Sbjct: 414 PGIRGKKMLK 423


>sp|DNLI_METTF|DNA ligase|Methanothermobacter thermautotrophicus (Methanobacterium

Query: 1 PGIEGKDVFR 10
PGI GK + +
Sbjct: 414 PGIRGKKMLK 423


>sp|NDK_METBF|NUCLEOSIDE diphosphate kinase|Methanosarcina barkeri (strain Fusaro /

Query: 3 IEGKDVFR 10
+EGKD R
Sbjct: 75 VEGKDAIR 82


>sp|IF2P_HALSA|PROBABLE translation initiation factor IF-2|Halobacterium salinarum (strain

Query: 2 GIEGKDVFR 10
GIEG D+ R
Sbjct: 506 GIEGNDLDR 514


>sp|IF2P_HALS3|PROBABLE translation initiation factor IF-2|Halobacterium salinarum (strain

Query: 2 GIEGKDVFR 10
GIEG D+ R
Sbjct: 506 GIEGNDLDR 514




249|Sequence|1241|1250|KDVFREATTD

>sp|AGLQ_HALVD|ARCHAEAL glycosylation protein Q|Haloferax volcanii (strain ATCC 29605

Query: 4 FREATTD 10
FREATTD
Sbjct: 289 FREATTD 295


>sp|MCH_METMP|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain DSM 14266

Query: 2 DVFREATTD 10
DVF+EA D
Sbjct: 271 DVFKEANYD 279


>sp|MCH_METM5|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain C5 /

Query: 2 DVFREATTD 10
DVF+EA D
Sbjct: 271 DVFKEANYD 279


>sp|RAD50_METKA|DNA double-strand break repair Rad50|Methanopyrus kandleri (strain AV19

Query: 1 KDVFREAT 8
+DVFREA
Sbjct: 128 RDVFREAV 135


>sp|MCH_METTH|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 DVFREATTD 10
DVFREA D
Sbjct: 271 DVFREADYD 279


>sp|METXA_NATPD|HOMOSERINE O-acetyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 DVFREATTD 10
D FRE+ TD
Sbjct: 331 DAFRESGTD 339


>sp|MCH_METMJ|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 DVFREATTD 10
D+F+EA D
Sbjct: 265 DIFKEANFD 273


>sp|TRM10_THEKO|TRNA (guanine(9)-/adenine(9)-N1)-methyltransferase|Thermococcus

Query: 2 DVFREA 7
DVFREA
Sbjct: 6 DVFREA 11




250|Sequence|1246|1255|EATTDFTVDS

>sp|COABC_METJA|COENZYME A biosynthesis bifunctional protein|Methanocaldococcus jannaschii

Query: 2 ATTDFTVDS 10
A +DFTV+S
Sbjct: 282 AISDFTVES 290


>sp|GATE_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanothermobacter thermautotrophicus

Query: 1 EATTDFTVDS 10
EA T+F VD+
Sbjct: 478 EALTEFRVDT 487




251|Sequence|1251|1260|FTVDSRPLTQ

>sp|COFC_HALVD|2-PHOSPHO-L-LACTATE guanylyltransferase|Haloferax volcanii (strain ATCC 29605

Query: 2 TVDSRPLTQ 10
TVD RPLT+
Sbjct: 62 TVDDRPLTE 70


>sp|COFC_NATMM|2-PHOSPHO-L-LACTATE guanylyltransferase|Natrialba magadii (strain ATCC 43099

Query: 1 FTVDSRPLT 9
TVD RPLT
Sbjct: 82 VTVDDRPLT 90


>sp|OTC_METMJ|ORNITHINE carbamoyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 FTVDSRPLTQ 10
+T+DSR L Q
Sbjct: 242 YTIDSRLLAQ 251


>sp|COFC_HALTV|2-PHOSPHO-L-LACTATE guanylyltransferase|Haloterrigena turkmenica (strain ATCC 51198

Query: 2 TVDSRPLTQ 10
VD RPLT+
Sbjct: 73 AVDDRPLTE 81


>sp|AROK_THEAC|SHIKIMATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FTVDSR 6
FTVDSR
Sbjct: 63 FTVDSR 68


>sp|SYV_THEAC|VALINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FTVDSRPLT 9
F+V RPLT
Sbjct: 196 FSVGDRPLT 204


>sp|COFC_HALLT|2-PHOSPHO-L-LACTATE guanylyltransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 VDSRPLT 9
+D RPLT
Sbjct: 65 IDDRPLT 71


>sp|COFC_HALMD|2-PHOSPHO-L-LACTATE guanylyltransferase|Halomicrobium mukohataei (strain ATCC 700874

Query: 1 FTVDSRPL 8
TVD RPL
Sbjct: 61 VTVDDRPL 68


>sp|SYK_HALMA|LYSINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 FTVDSRPLT 9
FT+D PL+
Sbjct: 301 FTLDGEPLS 309


>sp|COFC_NATPD|2-PHOSPHO-L-LACTATE guanylyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 VDSRPLT 9
VD RPLT
Sbjct: 63 VDKRPLT 69




252|Sequence|1256|1265|RPLTQVGGDH

>sp|DTDA_STAMF|D-AMINOACYL-TRNA deacylase|Staphylothermus marinus (strain ATCC 43588

Query: 2 PLTQVGGDH 10
P+T VGG H
Sbjct: 192 PVTGVGGGH 200


>sp|Y441_METJA|PROBABLE membrane transporter protein MJ0441|Methanocaldococcus jannaschii

Query: 2 PLTQVGG 8
PLT +GG
Sbjct: 194 PLTSIGG 200


>sp|DIPPS_ARCFU|BIFUNCTIONAL IPC transferase and DIPP|Archaeoglobus fulgidus (strain ATCC

Query: 1 RPLTQVGG 8
+PL +VGG
Sbjct: 91 KPLVRVGG 98




253|Sequence|1261|1270|VGGDHIKAHI

>sp|SFSA_PYRAR|SUGAR fermentation stimulation protein homolog|Pyrobaculum arsenaticum

Query: 1 VGGDHIKAHI 10
+GG +K HI
Sbjct: 27 IGGREVKIHI 36


>sp|CBIA_PICTO|COBYRINATE a,c-diamide synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 VGGDHIKAH 9
+GG H+K H
Sbjct: 378 MGGWHVKGH 386


>sp|COBQ_METHJ|PROBABLE cobyric acid synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 GDHIKAHI 10
DHI+AH+
Sbjct: 461 ADHIEAHV 468


>sp|Y243_ARCFU|UNCHARACTERIZED protein AF_0243|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 DHIKAH 9
DH++AH
Sbjct: 46 DHLRAH 51


>sp|PHSG_THELN|MALTODEXTRIN phosphorylase|Thermococcus litoralis (strain ATCC 51850

Query: 1 VGGDHIK 7
+ GDHIK
Sbjct: 129 LAGDHIK 135


>sp|SYP_METB6|PROLINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 GGDHIKAHI 10
G+H K+H+
Sbjct: 396 AGEHTKSHL 404


>sp|XACJ_HALVD|XYLOSE/ARABINOSE import ATP-binding protein XacJ|Haloferax volcanii (strain ATCC

Query: 1 VGGDHIKAHI 10
+GGDH+ +
Sbjct: 62 IGGDHMNYRV 71


>sp|RL18_METJA|LARGE ribosomal subunit protein uL18|Methanocaldococcus jannaschii

Query: 1 VGGDHIKAH 9
+ G+HIKA+
Sbjct: 143 IRGEHIKAY 151


>sp|DTDA_KORCO|D-AMINOACYL-TRNA deacylase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 GGDHIKAHI 10
GGDH K I
Sbjct: 90 GGDHFKLSI 98


>sp|RL3_THEON|LARGE ribosomal subunit protein uL3|Thermococcus onnurineus (strain NA1)

Query: 1 VGGDHIKA 8
+GGD +KA
Sbjct: 167 IGGDDVKA 174


>sp|RS3A_PYRAB|SMALL ribosomal subunit protein eS1|Pyrococcus abyssi (strain GE5 /

Query: 1 VGGDHIKAHI 10
+ GD +K H+
Sbjct: 56 ITGDFLKGHV 65




254|Sequence|1266|1275|IKAHIANPSG

>sp|AMZA_PYRAE|ARCHAEMETZINCIN aerophilum (strain ATCC 51768

Query: 3 AHIANPS 9
AH ANPS
Sbjct: 118 AHCANPS 124


>sp|RL6_THEON|LARGE ribosomal subunit protein uL6|Thermococcus onnurineus (strain

Query: 2 KAHIAN 7
KAHIAN
Sbjct: 72 KAHIAN 77


>sp|DPCKG_METLZ|GTP-DEPENDENT dephospho-CoA kinase|Methanocorpusculum labreanum (strain ATCC

Query: 4 HIANPSG 10
H+ NP+G
Sbjct: 79 HVTNPAG 85


>sp|APGM2_ARCFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IKAHIANP 8
+K H+A P
Sbjct: 332 VKTHVAEP 339




255|Sequence|1271|1280|ANPSGASTEC

>sp|NTPPA_THEKO|DTTP/UTP pyrophosphatase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 PSGASTEC 10
PS AS EC
Sbjct: 26 PSSASEEC 33


>sp|ENO_PYRFU|ENOLASE furiosus (strain ATCC 43587

Query: 1 ANPSGAST 8
A PSGAST
Sbjct: 38 AVPSGAST 45


>sp|FLAB4_NATMM|FLAGELLIN B4|Natrialba magadii (strain ATCC 43099

Query: 3 PSGASTEC 10
PSGA+TE
Sbjct: 237 PSGATTEV 244


>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 PSGASTEC 10
P GA EC
Sbjct: 584 PEGAEVEC 591


>sp|ENO_PYRAB|ENOLASE abyssi (strain GE5 /

Query: 1 ANPSGAST 8
A PSGAST
Sbjct: 38 AVPSGAST 45


>sp|ENO_THEGJ|ENOLASE gammatolerans (strain DSM 15229

Query: 1 ANPSGAST 8
A PSGAST
Sbjct: 38 AVPSGAST 45


>sp|ENO_PYRHO|ENOLASE horikoshii (strain ATCC 700860

Query: 1 ANPSGAST 8
A PSGAST
Sbjct: 38 AVPSGAST 45


>sp|ENO_THEKO|ENOLASE kodakarensis (strain ATCC BAA-918

Query: 1 ANPSGAST 8
A PSGAST
Sbjct: 38 AVPSGAST 45


>sp|ENO_THEON|ENOLASE onnurineus (strain NA1)

Query: 1 ANPSGAST 8
A PSGAST
Sbjct: 38 AVPSGAST 45


>sp|RL14E_METJA|LARGE ribosomal subunit protein eL14|Methanocaldococcus jannaschii

Query: 3 PSGASTE 9
P GASTE
Sbjct: 59 PKGASTE 65


>sp|ENO_METJA|ENOLASE jannaschii (strain ATCC 43067

Query: 3 PSGAST 8
PSGAST
Sbjct: 41 PSGAST 46


>sp|ENO_METTH|ENOLASE thermautotrophicus (strain ATCC 29096

Query: 1 ANPSGAST 8
A PSGAST
Sbjct: 36 AAPSGAST 43


>sp|ENO_ARCFU|ENOLASE fulgidus (strain ATCC 49558

Query: 3 PSGAST 8
PSGAST
Sbjct: 36 PSGAST 41


>sp|ENO1_METHJ|ENOLASE 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 ANPSGAST 8
A PSGAST
Sbjct: 36 ACPSGAST 43


>sp|TRM1_THEVO|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermoplasma volcanium

Query: 2 NPSGASTEC 10
+P+G T+C
Sbjct: 319 SPTGIKTDC 327


>sp|ENO_METTP|ENOLASE thermoacetophila (strain DSM 6194

Query: 1 ANPSGAST 8
A PSGAST
Sbjct: 36 AVPSGAST 43


>sp|ENO_METMP|ENOLASE maripaludis (strain DSM 14266

Query: 3 PSGAST 8
PSGAST
Sbjct: 41 PSGAST 46


>sp|ENO2_METHJ|ENOLASE 2|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 ANPSGAST 8
A PSGAST
Sbjct: 37 ACPSGAST 44


>sp|TRPD_METB6|ANTHRANILATE phosphoribosyltransferase|Methanoregula boonei (strain DSM 21154

Query: 1 ANPSGASTEC 10
ANP+GA+ +
Sbjct: 184 ANPAGAAAQV 193


>sp|ENO_METM7|ENOLASE maripaludis (strain C7 /

Query: 3 PSGAST 8
PSGAST
Sbjct: 41 PSGAST 46


>sp|ENO_NATPD|ENOLASE pharaonis (strain ATCC 35678

Query: 1 ANPSGAST 8
A PSGAST
Sbjct: 36 AAPSGAST 43


>sp|DABA_HALWD|PROBABLE inorganic carbon transporter subunit|Haloquadratum walsbyi (strain

Query: 2 NPSGASTEC 10
NP G+S +C
Sbjct: 611 NPFGSSLDC 619


>sp|ENO_METM5|ENOLASE maripaludis (strain C5 /

Query: 3 PSGAST 8
PSGAST
Sbjct: 41 PSGAST 46


>sp|ENO_METAC|ENOLASE acetivorans (strain ATCC 35395

Query: 3 PSGAST 8
PSGAST
Sbjct: 49 PSGAST 54


>sp|ENO_METST|ENOLASE stadtmanae (strain ATCC 43021

Query: 1 ANPSGAST 8
A PSGAST
Sbjct: 36 AAPSGAST 43


>sp|ENO_METVS|ENOLASE vannielii (strain ATCC 35089

Query: 3 PSGAST 8
PSGAST
Sbjct: 41 PSGAST 46


>sp|ENO_METKA|ENOLASE kandleri (strain AV19 /

Query: 3 PSGAST 8
PSGAST
Sbjct: 38 PSGAST 43


>sp|ENO_METBF|ENOLASE barkeri (strain Fusaro /

Query: 3 PSGAST 8
PSGAST
Sbjct: 48 PSGAST 53


>sp|ENO_METMA|ENOLASE mazei (strain ATCC BAA-159

Query: 3 PSGAST 8
PSGAST
Sbjct: 48 PSGAST 53


>sp|ENO_HALLT|ENOLASE lacusprofundi (strain ATCC 49239

Query: 1 ANPSGAST 8
A PSGAST
Sbjct: 36 AAPSGAST 43


>sp|ENO_HALSA|ENOLASE salinarum (strain ATCC 700922

Query: 1 ANPSGAST 8
A PSGAST
Sbjct: 36 AAPSGAST 43


>sp|ENO_HALS3|ENOLASE salinarum (strain ATCC 29341

Query: 1 ANPSGAST 8
A PSGAST
Sbjct: 36 AAPSGAST 43




256|Sequence|1276|1285|ASTECFVTDN

>sp|ADEC_METKA|ADENINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 5 CFVTDN 10
CFVTD+
Sbjct: 298 CFVTDD 303




257|Sequence|1281|1290|FVTDNADGTY

>sp|Y1652_METMP|UNCHARACTERIZED solute-binding protein MMP1652|Methanococcus maripaludis (strain

Query: 2 VTDNADGTY 10
V +NADGTY
Sbjct: 179 VNENADGTY 187


>sp|Y925_METM7|UNCHARACTERIZED solute-binding protein MmarC7_0925|Methanococcus maripaludis

Query: 1 FVTDNADGTY 10
V +NADGTY
Sbjct: 190 MVDENADGTY 199


>sp|Y1756_METM5|UNCHARACTERIZED solute-binding protein MmarC5_1756|Methanococcus maripaludis

Query: 2 VTDNADGTY 10
V +NADGTY
Sbjct: 194 VDENADGTY 202


>sp|FEN_METLZ|FLAP endonuclease 1|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 FVTDNADGTY 10
F+T N D TY
Sbjct: 160 FMTKNGDVTY 169


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 2 VTDNADGT 9
+ DN+DGT
Sbjct: 125 IKDNSDGT 132


>sp|RNZ_NATPD|RIBONUCLEASE Z|Natronomonas pharaonis (strain ATCC 35678

Query: 1 FVTDNAD 7
F TDNAD
Sbjct: 233 FATDNAD 239


>sp|COFH2_METMP|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanococcus maripaludis (strain DSM

Query: 2 VTDNADGTY 10
VTD A G Y
Sbjct: 261 VTDGASGLY 269




258|Sequence|1286|1295|ADGTYQVEYT

>sp|FTTA_METMP|TRANSCRIPTION termination factor FttA|Methanococcus maripaludis (strain DSM 14266

Query: 1 ADGTYQVEYT 10
DG Y V YT
Sbjct: 340 GDGLYNVAYT 349


>sp|SYE_AERPE|GLUTAMATE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 DGTYQVEYT 10
DG Y+V YT
Sbjct: 564 DGVYRVIYT 572


>sp|RL2_PICTO|LARGE ribosomal subunit protein uL2|Picrophilus torridus (strain ATCC

Query: 2 DGTYQVE 8
DGTY++E
Sbjct: 33 DGTYKIE 39


>sp|AROC_METTP|CHORISMATE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 ADGTYQVEY 9
AD TY V+Y
Sbjct: 108 ADYTYHVKY 116


>sp|PCNA_CENSY|DNA polymerase sliding clamp|Cenarchaeum symbiosum (strain A)

Query: 1 ADGTYQVEY 9
++GTY +EY
Sbjct: 193 SEGTYSLEY 201


>sp|CHED1_METMA|PROBABLE chemoreceptor glutamine deamidase CheD|Methanosarcina mazei (strain

Query: 1 ADGTYQVEYT 10
ADG+ V+YT
Sbjct: 204 ADGSMIVKYT 213


>sp|AATE_METBU|A-TYPE ATP synthase subunit E|Methanococcoides burtonii (strain DSM 6242

Query: 1 ADGTYQVEYT 10
+DGT +++YT
Sbjct: 152 SDGTVRLDYT 161


>sp|PCNA_METMJ|DNA polymerase sliding clamp|Methanoculleus marisnigri (strain ATCC

Query: 1 ADGTYQVEY 9
ADG +VEY
Sbjct: 230 ADGNGRVEY 238


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 2 DGTYQVE 8
DGTY+ E
Sbjct: 611 DGTYKAE 617


>sp|ARCR_HALS3|PROBABLE HTH-type transcriptional regulator ArcR|Halobacterium salinarum

Query: 2 DGTYQV 7
DGTYQ+
Sbjct: 67 DGTYQL 72


>sp|PCNA_NITMS|DNA polymerase sliding clamp|Nitrosopumilus maritimus (strain SCM1)

Query: 3 GTYQVEY 9
GTY +EY
Sbjct: 195 GTYSLEY 201




259|Sequence|1291|1300|QVEYTPFEKG

>sp|Y887_METTH|UPF0104 membrane protein MTH_887|Methanothermobacter thermautotrophicus

Query: 1 QVEYTPFEKG 10
+VE TPFE G
Sbjct: 119 EVEGTPFEIG 128


>sp|KPRS_PYRAE|RIBOSE-PHOSPHATE pyrophosphokinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 QVEYTPFEK 9
QV YT FEK
Sbjct: 173 QVPYTYFEK 181


>sp|PELO_SULAC|PROTEIN pelota homolog|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 QVEYTPFE 8
QVEYT F+
Sbjct: 60 QVEYTEFQ 67


>sp|HIS4_META3|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus aeolicus (strain

Query: 1 QVEYTPFEKG 10
+ EYTP E G
Sbjct: 145 KTEYTPIEIG 154


>sp|PELO_SULTO|PROTEIN pelota homolog|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 QVEYTPFE 8
QVEYT F+
Sbjct: 60 QVEYTEFQ 67


>sp|PYRC_HALSA|DIHYDROOROTASE salinarum (strain ATCC 700922

Query: 3 EYTPFE 8
E+TPFE
Sbjct: 384 EWTPFE 389


>sp|KAE1B_THEVO|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 EYTPFEK 9
+Y PFEK
Sbjct: 397 DYDPFEK 403


>sp|PYRC_METST|DIHYDROOROTASE stadtmanae (strain ATCC 43021

Query: 1 QVEYTPFE 8
+ +YTPFE
Sbjct: 389 KAKYTPFE 396


>sp|FLPA_METKA|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanopyrus kandleri (strain

Query: 2 VEYTPFEKG 10
+EY PFE+G
Sbjct: 69 MEYFPFEEG 77


>sp|RS4E_IGNH4|SMALL ribosomal subunit protein eS4|Ignicoccus hospitalis (strain KIN4/I

Query: 2 VEYTPFEKG 10
++Y PFE+G
Sbjct: 181 LDYVPFEEG 189


>sp|RFCL_STAMF|REPLICATION factor C large subunit|Staphylothermus marinus (strain ATCC 43588

Query: 3 EYTPFE 8
EY PFE
Sbjct: 231 EYAPFE 236


>sp|HEM3_AERPE|PROBABLE porphobilinogen deaminase|Aeropyrum pernix (strain ATCC 700893

Query: 2 VEYTPFE 8
VEYTP +
Sbjct: 181 VEYTPLD 187


>sp|GYAR_KORCO|GLYOXYLATE reductase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 VEYTPFEK 9
VEY P EK
Sbjct: 190 VEYVPLEK 197


>sp|PYRC_METTH|DIHYDROOROTASE thermautotrophicus (strain ATCC 29096

Query: 1 QVEYTPFE 8
+ YTPFE
Sbjct: 381 KAHYTPFE 388


>sp|HIS4_METVO|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus voltae

Query: 1 QVEYTPFEKG 10
+ EYTP + G
Sbjct: 144 KTEYTPVQMG 153


>sp|RS4E_PYRHO|SMALL ribosomal subunit protein eS4|Pyrococcus horikoshii (strain ATCC

Query: 2 VEYTPFEKG 10
+E PFEKG
Sbjct: 174 MEVLPFEKG 182


>sp|EF2_METMJ|ELONGATION factor 2|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 VEYTPFE 8
+E TPFE
Sbjct: 377 IEMTPFE 383


>sp|EF2_HALMD|ELONGATION factor 2|Halomicrobium mukohataei (strain ATCC 700874

Query: 2 VEYTPFE 8
VE TPFE
Sbjct: 377 VEMTPFE 383


>sp|HEM3_ARCFU|PROBABLE porphobilinogen deaminase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QVEYTPF 7
+VEY PF
Sbjct: 176 EVEYQPF 182


>sp|RS4E_METKA|SMALL ribosomal subunit protein eS4|Methanopyrus kandleri (strain AV19 /

Query: 2 VEYTPFEKG 10
V++ PFE+G
Sbjct: 188 VDHIPFEEG 196


>sp|AATA_METMA|A-TYPE ATP synthase subunit A|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 YTPFEK 9
Y+PFEK
Sbjct: 506 YSPFEK 511


>sp|RS4E_PYRFU|SMALL ribosomal subunit protein eS4|Pyrococcus furiosus (strain ATCC

Query: 2 VEYTPFEKG 10
+E PFEKG
Sbjct: 174 LEVLPFEKG 182


>sp|EF2_NATPD|ELONGATION factor 2|Natronomonas pharaonis (strain ATCC 35678

Query: 2 VEYTPFE 8
VE TPFE
Sbjct: 377 VEMTPFE 383


>sp|AATB_METST|A-TYPE ATP synthase subunit B|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 EYTPFEKG 10
EY FEKG
Sbjct: 239 EYLAFEKG 246


>sp|DACZ_HALVD|DIADENYLATE cyclase|Haloferax volcanii (strain ATCC 29605

Query: 2 VEYTPFEK 9
+ Y PFEK
Sbjct: 165 LSYNPFEK 172


>sp|Y1061_METJA|UNCHARACTERIZED membrane protein MJ1061|Methanocaldococcus jannaschii (strain ATCC

Query: 3 EYTPFE 8
EY PFE
Sbjct: 97 EYNPFE 102


>sp|RS4E_PYRAB|SMALL ribosomal subunit protein eS4|Pyrococcus abyssi (strain GE5 /

Query: 2 VEYTPFEKG 10
+E PFEKG
Sbjct: 174 LEVLPFEKG 182


>sp|RBL_ARCFU|RIBULOSE bisphosphate carboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QVEYTPFE 8
+VEYTP E
Sbjct: 336 EVEYTPDE 343


>sp|GLYA_METKA|SERINE hydroxymethyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 VEYTPFEK 9
VEY PF++
Sbjct: 137 VEYLPFDE 144


>sp|PUR7_METKA|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 VEYTPFEKG 10
VE PFE+G
Sbjct: 103 VERLPFEEG 111


>sp|HIS4_METTL|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanothermococcus

Query: 1 QVEYTPFEKG 10
+ +YTP E G
Sbjct: 144 KTKYTPVEMG 153


>sp|RPO6_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo6|Archaeoglobus fulgidus (strain ATCC

Query: 3 EYTPFEKG 10
EYT FEK
Sbjct: 10 EYTRFEKA 17


>sp|GAL1_PYRFU|GALACTOKINASE furiosus (strain ATCC 43587

Query: 1 QVEYTPFEK 9
Q EY PF K
Sbjct: 172 QYEYIPFPK 180


>sp|FLPA_THEVO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermoplasma volcanium (strain

Query: 1 QVEYTPFEK 9
+V Y PF K
Sbjct: 104 EVSYEPFSK 112


>sp|LACC_HALVD|LACCASE volcanii (strain ATCC 29605

Query: 5 TPFEKG 10
TPFE+G
Sbjct: 333 TPFERG 338


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 1 QVEYTPFEK 9
+VE+ P EK
Sbjct: 1090 KVEFVPIEK 1098




260|Sequence|1296|1305|PFEKGLHVVE

>sp|AATB_METST|A-TYPE ATP synthase subunit B|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 FEKGLHVV 9
FEKG+HV+
Sbjct: 243 FEKGMHVL 250


>sp|TRM56_METMA|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanosarcina mazei (strain

Query: 1 PFEKGLHVVE 10
P E+G HV+E
Sbjct: 164 PAERGKHVIE 173


>sp|AATI_HALSA|A-TYPE ATP synthase subunit I|Halobacterium salinarum (strain ATCC 700922

Query: 1 PFEKGLHV 8
P +KGLHV
Sbjct: 459 PLKKGLHV 466


>sp|TRM56_METAC|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanosarcina acetivorans

Query: 1 PFEKGLHVVE 10
P E+G HV+E
Sbjct: 164 PAERGKHVIE 173


>sp|AATB_METM7|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain C7 /

Query: 2 FEKGLHVV 9
+EKG+HV+
Sbjct: 242 YEKGMHVL 249


>sp|AATB_METM6|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain C6 /

Query: 2 FEKGLHVV 9
+EKG+HV+
Sbjct: 242 YEKGMHVL 249


>sp|AATB_METMP|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain DSM 14266

Query: 2 FEKGLHVV 9
+EKG+HV+
Sbjct: 242 YEKGMHVL 249


>sp|AATB3_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 FEKGLHVV 9
F+KG+HV+
Sbjct: 241 FDKGMHVL 248


>sp|AATB_METM5|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain C5 /

Query: 2 FEKGLHVV 9
+EKG+HV+
Sbjct: 242 YEKGMHVL 249


>sp|AATB_META3|A-TYPE ATP synthase subunit B|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 FEKGLHVV 9
+EKG+HV+
Sbjct: 242 YEKGMHVL 249


>sp|AATB_THEAC|A-TYPE ATP synthase subunit B|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 FEKGLHVV 9
F+KG+H++
Sbjct: 238 FQKGMHIL 245


>sp|AATB_METVS|A-TYPE ATP synthase subunit B|Methanococcus vannielii (strain ATCC 35089

Query: 2 FEKGLHVV 9
+EKG+HV+
Sbjct: 242 YEKGMHVL 249


>sp|PSTB_METAC|PHOSPHATE import ATP-binding protein PstB|Methanosarcina acetivorans

Query: 2 FEKGLHVVE 10
+EKG+ VVE
Sbjct: 82 YEKGVDVVE 90


>sp|THI4_METTH|THIAMINE thiazole synthase|Methanothermobacter thermautotrophicus (strain

Query: 1 PFEKGLHVVE 10
P+++G HV +
Sbjct: 93 PYDEGYHVAD 102


>sp|GATE_THEVO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermoplasma volcanium (strain ATCC

Query: 2 FEKGLHVVE 10
FE+ LHV E
Sbjct: 37 FERHLHVSE 45


>sp|GLCD3_SACS2|GLUCOSE 1-dehydrogenase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PFEKGLHVVE 10
P KG+HV E
Sbjct: 8 PPNKGVHVKE 17


>sp|AATB_SULTO|A-TYPE ATP synthase subunit B|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 FEKGLHVV 9
FEK +HV+
Sbjct: 241 FEKDMHVL 248


>sp|CH10_METAC|CO-CHAPERONIN GroES|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PFEKGLHVV 9
P +KG HV+
Sbjct: 70 PLKKGDHVI 78


>sp|CH10_METBF|CO-CHAPERONIN GroES|Methanosarcina barkeri (strain Fusaro /

Query: 1 PFEKGLHVV 9
P +KG HV+
Sbjct: 53 PLKKGDHVI 61




261|Sequence|1301|1310|LHVVEVTYDD

>sp|SRP54_METMP|SIGNAL recognition particle 54 kDa|Methanococcus maripaludis (strain DSM

Query: 2 HVVEVTYDD 10
H+V++ YD+
Sbjct: 73 HIVKIVYDE 81


>sp|SRP54_METM7|SIGNAL recognition particle 54 kDa|Methanococcus maripaludis (strain C7

Query: 2 HVVEVTYDD 10
H+V++ YD+
Sbjct: 73 HIVKIVYDE 81


>sp|SRP54_METM6|SIGNAL recognition particle 54 kDa|Methanococcus maripaludis (strain C6

Query: 2 HVVEVTYDD 10
H+V++ YD+
Sbjct: 73 HIVKIVYDE 81


>sp|SRP54_METM5|SIGNAL recognition particle 54 kDa|Methanococcus maripaludis (strain C5

Query: 2 HVVEVTYDD 10
H+V++ YD+
Sbjct: 73 HIVKIVYDE 81


>sp|MSRA_METMJ|PEPTIDE methionine sulfoxide reductase MsrA|Methanoculleus marisnigri

Query: 3 VVEVTYD 9
VV+VTYD
Sbjct: 60 VVQVTYD 66


>sp|GLNB1_METBA|NITROGEN fixation nifHD1 region GlnB-like|Methanosarcina barkeri

Query: 1 LHVVEVTYDD 10
+H+ +++YD+
Sbjct: 42 IHIADISYDE 51


>sp|SYP_SACS2|PROLINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 HVVEVTYDD 10
H V TYDD
Sbjct: 164 HTVHETYDD 172


>sp|SRP54_METVS|SIGNAL recognition particle 54 kDa|Methanococcus vannielii (strain ATCC

Query: 2 HVVEVTYDD 10
H++++ YD+
Sbjct: 73 HIIKIVYDE 81


>sp|SRP54_META3|SIGNAL recognition particle 54 kDa|Methanococcus aeolicus (strain ATCC

Query: 2 HVVEVTYDD 10
H++++ YD+
Sbjct: 73 HIIKIVYDE 81


>sp|SYP_SACI6|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 HVVEVTYDD 10
H V TYDD
Sbjct: 164 HTVHETYDD 172


>sp|SYP_SACI4|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 HVVEVTYDD 10
H V TYDD
Sbjct: 164 HTVHETYDD 172


>sp|SYP_SACI3|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 HVVEVTYDD 10
H V TYDD
Sbjct: 164 HTVHETYDD 172


>sp|SYP_SACI7|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 HVVEVTYDD 10
H V TYDD
Sbjct: 164 HTVHETYDD 172


>sp|SYP_SACI2|PROLINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 HVVEVTYDD 10
H V TYDD
Sbjct: 164 HTVHETYDD 172


>sp|SYP_SACI1|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 HVVEVTYDD 10
H V TYDD
Sbjct: 164 HTVHETYDD 172


>sp|SRP54_METTH|SIGNAL recognition particle 54 kDa|Methanothermobacter

Query: 2 HVVEVTYDD 10
H++ + YD+
Sbjct: 73 HIISIVYDE 81


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 5 EVTYDD 10
E+TYDD
Sbjct: 1334 EITYDD 1339


>sp|Y1684_METTH|UNCHARACTERIZED protein MTH_1684|Methanothermobacter thermautotrophicus (strain

Query: 3 VVEVTYDD 10
+ E+TY+D
Sbjct: 323 ITEITYED 330


>sp|DNLI_PYRAY|DNA ligase|Pyrococcus abyssi

Query: 3 VVEVTYDD 10
V+EVTY +
Sbjct: 502 VIEVTYQE 509


>sp|DNLI_PYRHO|DNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 VVEVTYDD 10
V+EVTY +
Sbjct: 502 VIEVTYQE 509


>sp|PSB_HALSA|PROTEASOME subunit beta|Halobacterium salinarum (strain ATCC 700922

Query: 1 LHVVEVTYD 9
+H+ ++T+D
Sbjct: 221 IHITKITHD 229


>sp|PSB_HALS3|PROTEASOME subunit beta|Halobacterium salinarum (strain ATCC 29341

Query: 1 LHVVEVTYD 9
+H+ ++T+D
Sbjct: 221 IHITKITHD 229


>sp|DNLI_PYRAB|DNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 VVEVTYDD 10
V+EVTY +
Sbjct: 502 VIEVTYQE 509


>sp|SRP54_THEGJ|SIGNAL recognition particle 54 kDa|Thermococcus gammatolerans (strain

Query: 2 HVVEVTYDD 10
HV+++ Y++
Sbjct: 74 HVIKIVYEE 82


>sp|DNLI_THEKO|DNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 VVEVTYDD 10
V+EVTY +
Sbjct: 502 VIEVTYQE 509


>sp|Y1198_PYRAB|PUTATIVE antitoxin PYRAB11980|Pyrococcus abyssi (strain GE5 /

Query: 1 LHVVEVTYDD 10
+ V+EV Y+D
Sbjct: 1 MEVIEVVYED 10




262|Sequence|1306|1315|VTYDDVPIPN

>sp|Y634_METJA|UNCHARACTERIZED KamA family protein MJ0634|Methanocaldococcus jannaschii (strain

Query: 2 TYDDVPI 8
TY+DVPI
Sbjct: 590 TYEDVPI 596


>sp|PIMT_KORCO|PROTEIN-L-ISOASPARTATE O-methyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 VTYDDVPIP 9
V Y+D+P+P
Sbjct: 41 VAYEDIPLP 49


>sp|HELS_METAR|ATP-DEPENDENT DNA helicase Hel308|Methanocella arvoryzae (strain DSM 22066

Query: 1 VTYDDVPIP 9
V Y VPIP
Sbjct: 365 VNYGSVPIP 373


>sp|MRE11_PYRAB|DNA double-strand break repair protein|Pyrococcus abyssi (strain GE5 /

Query: 1 VTYDDVPI 8
+TYDD P+
Sbjct: 215 LTYDDAPV 222


>sp|SYA_METAR|ALANINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 VTYDDVP 7
V YDD+P
Sbjct: 757 VGYDDIP 763


>sp|REP75_PYRAB|REPLICATION initiator protein|Pyrococcus abyssi (strain GE5 /

Query: 1 VTYDDVPI 8
++YDD PI
Sbjct: 21 LSYDDQPI 28


>sp|CAS7_THETK|CRISPR-ASSOCIATED protein Cas7/Cst2/DevR|Thermoproteus tenax (strain ATCC 35583

Query: 1 VTYDDVPIPN 10
+ D PIPN
Sbjct: 248 IAISDSPIPN 257


>sp|HTPX_SACI1|PROTEASE HtpX homolog|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 5 DVPIPN 10
DVP PN
Sbjct: 108 DVPFPN 113


>sp|DHE3_PYRHR|GLUTAMATE dehydrogenase|Pyrococcus horikoshii

Query: 3 YDDVPIPN 10
Y+D+P P+
Sbjct: 138 YEDIPAPD 145


>sp|DHE3_PYRHO|GLUTAMATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 YDDVPIPN 10
Y+D+P P+
Sbjct: 138 YEDIPAPD 145


>sp|HTPX2_SACS2|PROTEASE HtpX homolog 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 DVPIPN 10
DVP PN
Sbjct: 108 DVPFPN 113


>sp|DHE3_PYREN|GLUTAMATE dehydrogenase|Pyrococcus endeavori

Query: 3 YDDVPIPN 10
Y+D+P P+
Sbjct: 138 YEDIPAPD 145


>sp|SYR_THEKO|ARGININE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VTYDDVP 7
+T+DD P
Sbjct: 33 ITFDDTP 39


>sp|DHE3_PYRAB|GLUTAMATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 3 YDDVPIPN 10
Y+D+P P+
Sbjct: 138 YEDIPAPD 145


>sp|DHE3_PYRFU|GLUTAMATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 YDDVPIPN 10
Y+D+P P+
Sbjct: 138 YEDIPAPD 145


>sp|AMPPA_METB6|AMP phosphorylase|Methanoregula boonei (strain DSM 21154

Query: 1 VTYDDVPI 8
+TY D+P+
Sbjct: 319 LTYGDIPV 326


>sp|KAE1_CALMQ|TRNA N6-adenosine threonylcarbamoyltransferase|Caldivirga maquilingensis

Query: 4 DDVPIP 9
D+VPIP
Sbjct: 319 DEVPIP 324


>sp|ILVB_METAO|PROBABLE acetolactate synthase large subunit|Methanococcus aeolicus

Query: 3 YDDVPI 8
YDD+PI
Sbjct: 369 YDDIPI 374


>sp|OGT_METKA|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 VTYDDVPI 8
V +DDVP+
Sbjct: 36 VDFDDVPV 43


>sp|ACDD2_METAC|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 3 YDDVPIPN 10
Y D P+PN
Sbjct: 141 YFDAPMPN 148


>sp|ACDD1_METAC|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 3 YDDVPIPN 10
Y D P+PN
Sbjct: 141 YFDAPMPN 148


>sp|UVRC_METBU|UVRABC system protein C|Methanococcoides burtonii (strain DSM 6242

Query: 3 YDDVPIP 9
Y D P+P
Sbjct: 300 YQDAPVP 306


>sp|PIMT_IGNH4|PROTEIN-L-ISOASPARTATE O-methyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 VTYDDVPIP 9
+ Y+D P+P
Sbjct: 43 MAYEDTPLP 51


>sp|PIMT_METMJ|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 VTYDDVPIP 9
V Y+D P+P
Sbjct: 48 VAYEDRPLP 56


>sp|ACDD1_METTE|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 3 YDDVPIPN 10
Y D P+PN
Sbjct: 141 YFDAPMPN 148


>sp|Y819_PYRHO|UNCHARACTERIZED methyltransferase PH0819|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 DDVPIPN 10
D++PIP+
Sbjct: 171 DEIPIPS 177


>sp|GATB_HALMA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Haloarcula marismortui (strain ATCC

Query: 4 DDVPIP 9
D+VPIP
Sbjct: 320 DEVPIP 325




263|Sequence|1311|1320|VPIPNSPFKV

>sp|MTMB2_METBA|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri

Query: 2 PIPNSPFKV 10
PIP SP++V
Sbjct: 169 PIPKSPYEV 177


>sp|MTMB1_METBA|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri

Query: 2 PIPNSPFKV 10
PIP SP++V
Sbjct: 169 PIPKSPYEV 177


>sp|MTMB_METMA|MONOMETHYLAMINE methyltransferase MtmB|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PIPNSPFKV 10
PIP SP++V
Sbjct: 169 PIPGSPYEV 177


>sp|MTMB3_METBF|MONOMETHYLAMINE methyltransferase MtmB3|Methanosarcina barkeri (strain Fusaro /

Query: 2 PIPNSPFKV 10
P+P SP++V
Sbjct: 169 PVPKSPYEV 177


>sp|MTMB2_METBF|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri (strain Fusaro /

Query: 2 PIPNSPFKV 10
P+P SP++V
Sbjct: 169 PVPKSPYEV 177


>sp|MTMB2_METAC|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina acetivorans (strain ATCC

Query: 2 PIPNSPFKV 10
P+P SP++V
Sbjct: 169 PVPKSPYEV 177


>sp|MTMB1_METBF|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri (strain Fusaro /

Query: 2 PIPNSPFKV 10
P+P SP++V
Sbjct: 169 PVPKSPYEV 177


>sp|MTMB1_METAC|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina acetivorans (strain ATCC

Query: 2 PIPNSPFKV 10
P+P SP++V
Sbjct: 169 PVPKSPYEV 177


>sp|DNLI_PICTO|DNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 PIPNSPFKV 10
P+P PFKV
Sbjct: 217 PVPLIPFKV 225


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PIPNSPFKV 10
P PNSPF +
Sbjct: 36 PYPNSPFHL 44


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 2 PIPNSPFKV 10
P PNSPF +
Sbjct: 47 PYPNSPFHL 55


>sp|AHBB_METBF|SIROHEME decarboxylase beta subunit|Methanosarcina barkeri (strain Fusaro

Query: 1 VPIPNSPFK 9
+PI +SPFK
Sbjct: 16 IPITHSPFK 24


>sp|DNLI_THEVO|DNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 PIPNSPFKV 10
P P PFKV
Sbjct: 217 PTPMVPFKV 225


>sp|DNLI_THEAC|DNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PIPNSPFKV 10
P P PFKV
Sbjct: 217 PTPMIPFKV 225


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PIPNSPFKV 10
P PNSPF +
Sbjct: 35 PYPNSPFHL 43


>sp|RFCS_METAC|REPLICATION factor C small subunit|Methanosarcina acetivorans (strain ATCC

Query: 2 PIPNSPFKV 10
PI +PFK+
Sbjct: 106 PIGGAPFKI 114


>sp|RFCS_ARCFU|REPLICATION factor C small subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PIPNSPFKV 10
PI +PFK+
Sbjct: 97 PIGGAPFKI 105


>sp|AROB_PYRAE|3-DEHYDROQUINATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PIPNSP 7
P+PN+P
Sbjct: 41 PLPNAP 46


>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PIPNSPFKV 10
P PNSP+ +
Sbjct: 36 PYPNSPWHI 44


>sp|DAPB_METS3|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 VPIPNSPF 8
+ IPNSP
Sbjct: 33 IEIPNSPL 40


>sp|TRPD_METMA|ANTHRANILATE phosphoribosyltransferase|Methanosarcina mazei (strain ATCC

Query: 4 PNSPFKV 10
PN+PF++
Sbjct: 71 PNTPFRI 77


>sp|TOP3_SACS2|DNA topoisomerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 IPNSPFKV 10
+PNS FK+
Sbjct: 384 LPNSKFKI 391


>sp|Y1487_METJA|UNCHARACTERIZED methyltransferase MJ1487|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VPIPNSPF 8
+P+P +PF
Sbjct: 371 MPLPQTPF 378


>sp|TRUD_THESM|PROBABLE tRNA pseudouridine synthase D|Thermococcus sibiricus (strain DSM

Query: 1 VPIPNSPFKV 10
+PI N FKV
Sbjct: 304 LPIRNKTFKV 313


>sp|SYT_METB6|THREONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 4 PNSPFK 9
PN PFK
Sbjct: 572 PNKPFK 577


>sp|Y977_METKA|UNCHARACTERIZED glycosyltransferase MK0977|Methanopyrus kandleri (strain AV19 /

Query: 1 VPIPNSP 7
VP+PN P
Sbjct: 275 VPLPNHP 281


>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 PIPNSPFKV 10
P PNSP +
Sbjct: 47 PYPNSPMHL 55


>sp|Y520_METJA|PUTATIVE NADH-ubiquinone oxidoreductase MJ0520|Methanocaldococcus jannaschii

Query: 4 PNSPFKV 10
PNSPF +
Sbjct: 187 PNSPFGI 193


>sp|KPYK_PYRAE|PYRUVATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VPIPNSPF 8
+P+PN F
Sbjct: 115 IPVPNKAF 122


>sp|SLAA_SULAC|S-LAYER protein A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VPIPNSP 7
VP+PN+P
Sbjct: 1291 VPLPNAP 1297




264|Sequence|1316|1325|SPFKVAVTEG

>sp|DABA_NATPD|PROBABLE inorganic carbon transporter subunit|Natronomonas pharaonis

Query: 1 SPFKVAVTEG 10
SPF+ AV EG
Sbjct: 44 SPFEDAVAEG 53


>sp|HELS_SACS9|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain 98/2)

Query: 3 FKVAVTEG 10
FKVA+T G
Sbjct: 103 FKVAMTSG 110


>sp|HELS_SACS2|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 FKVAVTEG 10
FKVA+T G
Sbjct: 96 FKVAMTSG 103


>sp|HELS_SACI5|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus islandicus (strain REY15A)

Query: 3 FKVAVTEG 10
FKVA+T G
Sbjct: 103 FKVAMTSG 110


>sp|PSB2_THEKO|PROTEASOME subunit beta 2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 SPFKVAVTE 9
SPF +AV E
Sbjct: 137 SPFAIAVLE 145


>sp|PSB2_THEON|PROTEASOME subunit beta 2|Thermococcus onnurineus (strain NA1)

Query: 1 SPFKVAVTE 9
SPF +AV E
Sbjct: 138 SPFAIAVLE 146


>sp|HELS_SULAC|ATP-DEPENDENT DNA helicase Hel308|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 FKVAVTEG 10
FKV VT G
Sbjct: 99 FKVGVTSG 106


>sp|DNLI_IGNH4|DNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 KVAVTEG 10
K+AVTEG
Sbjct: 210 KIAVTEG 216




265|Sequence|1321|1330|AVTEGCQPSR

>sp|COX1_HALSA|CYTOCHROME c oxidase polypeptide 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 AVTEGCQPS 9
AVT+G QP+
Sbjct: 578 AVTDGGQPA 586


>sp|SYFB_PYRAE|PHENYLALANINE--TRNA ligase beta subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 AVTEGCQPSR 10
AV E C P+R
Sbjct: 376 AVAEVCSPAR 385


>sp|PURL_METAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 AVTEGCQP 8
A+T GCQP
Sbjct: 434 ALTCGCQP 441




266|Sequence|1326|1335|CQPSRVQAQG

***** No hits found ******


267|Sequence|1331|1340|VQAQGPGLKE

>sp|RTCB_ARCFU|TRNA-SPLICING ligase RtcB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 QAQGPGLKE 10
+A GPGLKE
Sbjct: 356 RAFGPGLKE 364


>sp|RPO3_THEKO|DNA-DIRECTED RNA polymerase subunit Rpo3|Thermococcus kodakarensis (strain

Query: 1 VQAQGPGL 8
++A+GPG+
Sbjct: 91 LEAEGPGM 98


>sp|PSTOM_PYRAB|STOMATIN homolog PYRAB06580|Pyrococcus abyssi (strain GE5 /

Query: 1 VQAQGPGL 8
V A+GPGL
Sbjct: 43 VGARGPGL 50


>sp|PSTOM_PYRHO|STOMATIN homolog PH1511|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VQAQGPGL 8
V A+GPGL
Sbjct: 43 VGARGPGL 50


>sp|RPO3_PYRHO|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrococcus horikoshii (strain ATCC

Query: 1 VQAQGPGL 8
++A+GPG+
Sbjct: 91 LEAEGPGI 98


>sp|RPO3_PYRFU|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VQAQGPGL 8
++A+GPG+
Sbjct: 93 LEAEGPGI 100


>sp|Y1420_ARCFU|UNCHARACTERIZED protein AF_1420|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VQAQGPGL 8
V A+GPGL
Sbjct: 38 VGARGPGL 45


>sp|RPO3_PYRAB|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrococcus abyssi (strain GE5 /

Query: 1 VQAQGPGL 8
++A+GPG+
Sbjct: 91 LEAEGPGI 98




268|Sequence|1336|1345|PGLKEAFTNK

>sp|COBS_PYRAE|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PGLKEAFT 8
PGL EAFT
Sbjct: 142 PGLGEAFT 149


>sp|ACDG2_METTE|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina

Query: 2 GLKEAFTN 9
GLK++FTN
Sbjct: 247 GLKDSFTN 254


>sp|DPCKG_THEPD|GTP-DEPENDENT dephospho-CoA kinase|Thermofilum pendens (strain DSM 2475

Query: 1 PGLKEAFTNK 10
PG EAFT K
Sbjct: 79 PGKAEAFTCK 88


>sp|ACDG2_METMA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina mazei

Query: 2 GLKEAFTN 9
GLK+ FTN
Sbjct: 248 GLKDTFTN 255


>sp|ACDG1_METMA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina mazei

Query: 2 GLKEAFTN 9
GLK+ FTN
Sbjct: 248 GLKDTFTN 255


>sp|ACDG_METAC|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina

Query: 2 GLKEAFTN 9
GLK+ FTN
Sbjct: 247 GLKDTFTN 254


>sp|ACDG1_METTE|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina

Query: 2 GLKEAFTN 9
GLK+ FTN
Sbjct: 247 GLKDTFTN 254


>sp|DNLI_METST|DNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PGLKEAFT 8
PG+KE+ T
Sbjct: 236 PGIKESIT 243


>sp|Y4618_METAC|UPF0313 protein MA_4618|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PGLKEAFT 8
PG+K FT
Sbjct: 550 PGVKHVFT 557




269|Sequence|1341|1350|AFTNKPNVFT

>sp|DCHI_THEKO|DIACETYLCHITOBIOSE deacetylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 FTNKPNVF 9
+T+KPN F
Sbjct: 191 YTHKPNYF 198


>sp|K6PF_THEKO|ADP-SPECIFIC phosphofructokinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 FTNKPNVF 9
F KPN+F
Sbjct: 134 FVKKPNLF 141


>sp|K6PF_THEZI|ADP-SPECIFIC phosphofructokinase|Thermococcus zilligii

Query: 2 FTNKPNVF 9
F KPN+F
Sbjct: 134 FVRKPNLF 141


>sp|GUAAA_METVS|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus vannielii

Query: 2 FTNKPNVFT 10
F N PN FT
Sbjct: 112 FKNVPNEFT 120


>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 TNKPNVFT 10
TNKP V T
Sbjct: 2 TNKPTVVT 9


>sp|Y304_SULTO|UPF0215 protein STK_03040|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 FTNKPNVF 9
+++KPN+F
Sbjct: 88 YSSKPNIF 95


>sp|RNZ_SACI7|RIBONUCLEASE Z|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 FTNKPNVFT 10
F N+P+ FT
Sbjct: 224 FLNEPSAFT 232


>sp|RNZ_SACI2|RIBONUCLEASE Z|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 FTNKPNVFT 10
F N+P+ FT
Sbjct: 224 FLNEPSAFT 232


>sp|RNZ_SACI1|RIBONUCLEASE Z|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 FTNKPNVFT 10
F N+P+ FT
Sbjct: 224 FLNEPSAFT 232


>sp|MTM1_METJA|TYPE II methyltransferase M.MjaI|Methanocaldococcus jannaschii (strain

Query: 3 TNKPNVF 9
+NKPN F
Sbjct: 147 SNKPNAF 153




270|Sequence|1346|1355|PNVFTVVTRG

>sp|ARCC_THEAC|CARBAMATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 NVFTVVTR 9
N+FT++TR
Sbjct: 102 NIFTIITR 109


>sp|NK_THEAC|NUCLEOSIDE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PNVFTVVTRG 10
P V T+VT G
Sbjct: 189 PKVTTIVTNG 198


>sp|RL6_SULTO|LARGE ribosomal subunit protein uL6|Sulfurisphaera tokodaii (strain DSM

Query: 2 NVFTVVTRG 10
N+FT VT+G
Sbjct: 77 NMFTGVTKG 85


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PNVFTVVTRG 10
PN T+V RG
Sbjct: 524 PNCGTIVHRG 533


>sp|ARCC_THEVO|CARBAMATE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 NVFTVVTR 9
++FT++TR
Sbjct: 102 SIFTIITR 109


>sp|PYRG_SACS2|CTP synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PNVFTVVTRG 10
PN + VVT G
Sbjct: 2 PNKYIVVTGG 11




271|Sequence|1351|1360|VVTRGAGIGG

>sp|Y1582_METJA|UNCHARACTERIZED metal-dependent hydrolase MJ1582|Methanocaldococcus jannaschii

Query: 1 VVTRGAGIGG 10
+VT GA +GG
Sbjct: 36 IVTSGASLGG 45


>sp|FTSZ2_ARCFU|CELL division protein FtsZ 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VTRGAGIGG 10
+TRG G GG
Sbjct: 83 ITRGLGAGG 91


>sp|RUVB_METHJ|HOLLIDAY junction branch migration complex|Methanospirillum hungatei JF-1

Query: 1 VVTRGAGIGG 10
+VTR AGI G
Sbjct: 189 IVTRSAGILG 198


>sp|Y584_METJA|UPF0718 protein MJ0584|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VVTRGAGIG 9
+ RGAGIG
Sbjct: 89 IYKRGAGIG 97


>sp|CATA_METBF|CATALASE barkeri (strain Fusaro /

Query: 1 VVTRGAGIGG 10
V +GAG GG
Sbjct: 57 VHAKGAGAGG 66


>sp|ILVE_METJA|PUTATIVE branched-chain-amino-acid aminotransferase|Methanocaldococcus

Query: 1 VVTRGAG 7
VVTRG G
Sbjct: 90 VVTRGVG 96




272|Sequence|1356|1365|AGIGGLGITV

>sp|FEN_METPE|FLAP endonuclease 1|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 IGGLGIT 9
+GGLGIT
Sbjct: 215 LGGLGIT 221


>sp|ASPD_METKA|L-ASPARTATE dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 2 GIGGLGITV 10
G GG+G TV
Sbjct: 10 GAGGIGTTV 18


>sp|IDH_HALVD|ISOCITRATE dehydrogenase [NADP]|Haloferax volcanii (strain ATCC 29605

Query: 1 AGIGGLGI 8
A IGGLGI
Sbjct: 314 AQIGGLGI 321


>sp|SYC_AERPE|CYSTEINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 GIGGLGITV 10
G+G LGI +
Sbjct: 99 GLGSLGIQI 107


>sp|HUTU_HALSA|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 700922

Query: 1 AGIGGLG 7
AG+GG+G
Sbjct: 184 AGLGGMG 190


>sp|HUTU_HALS3|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 29341

Query: 1 AGIGGLG 7
AG+GG+G
Sbjct: 184 AGLGGMG 190




273|Sequence|1361|1370|LGITVEGPSE

>sp|PELO_AERPE|PROTEIN pelota homolog|Aeropyrum pernix (strain ATCC 700893

Query: 2 GITVEGPSE 10
GI VEGP E
Sbjct: 78 GIVVEGPDE 86


>sp|PELO_DESA1|PROTEIN pelota homolog|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 GITVEGPSE 10
GI VEGP E
Sbjct: 79 GIVVEGPEE 87


>sp|RL6_HALWD|LARGE ribosomal subunit protein uL6|Haloquadratum walsbyi (strain DSM

Query: 1 LGITVEGPS 9
L +TVEGP+
Sbjct: 19 LALTVEGPN 27


>sp|Y635_METJA|UNCHARACTERIZED protein MJ0635|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LGITVEGPSE 10
L +TVEGP +
Sbjct: 270 LIVTVEGPED 279


>sp|RL11_ARCFU|LARGE ribosomal subunit protein uL11|Archaeoglobus fulgidus (strain ATCC

Query: 1 LGITVEGPS 9
+GITVEG S
Sbjct: 131 MGITVEGKS 139


>sp|Y558_METJA|UNCHARACTERIZED protein MJ0558|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LGITVEGPSE 10
LGITV+ SE
Sbjct: 31 LGITVQAVSE 40


>sp|NADM_METPE|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanosphaerula palustris (strain ATCC

Query: 1 LGITVEGPS 9
+GI+VE PS
Sbjct: 110 VGISVESPS 118


>sp|RL6_HALSA|LARGE ribosomal subunit protein uL6|Halobacterium salinarum (strain

Query: 1 LGITVEGP 8
L +TVEGP
Sbjct: 19 LDLTVEGP 26


>sp|RL6_NATPD|LARGE ribosomal subunit protein uL6|Natronomonas pharaonis (strain ATCC

Query: 1 LGITVEGPS 9
L +TVEGP+
Sbjct: 18 LEVTVEGPN 26


>sp|SYG_PYRAB|GLYCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 LGITVEGPS 9
LGI VEG S
Sbjct: 108 LGIDVEGKS 116


>sp|SYG_PYRHO|GLYCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LGITVEGPS 9
LGI VEG S
Sbjct: 108 LGIDVEGKS 116


>sp|SYG_PYRFU|GLYCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LGITVEGPS 9
LGI VEG S
Sbjct: 106 LGIDVEGKS 114


>sp|SYM_METAR|METHIONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 ITVEGPSE 10
+TVE PSE
Sbjct: 670 LTVEKPSE 677


>sp|CSG_HALSA|CELL surface glycoprotein|Halobacterium salinarum (strain ATCC 700922

Query: 1 LGITVEGPS 9
G+TV+ PS
Sbjct: 133 FGVTVQSPS 141


>sp|CSG_HALS3|CELL surface glycoprotein|Halobacterium salinarum (strain ATCC 29341

Query: 1 LGITVEGPS 9
G+TV+ PS
Sbjct: 133 FGVTVQSPS 141


>sp|RL11_SULAC|LARGE ribosomal subunit protein uL11|Sulfolobus acidocaldarius (strain

Query: 1 LGITVEG 7
+GITVEG
Sbjct: 133 IGITVEG 139


>sp|MCH_HALMA|MESACONYL-COA hydratase|Haloarcula marismortui (strain ATCC 43049

Query: 1 LGITVEGPSE 10
+GITVE SE
Sbjct: 96 MGITVEDLSE 105


>sp|MTAP_THEAC|S-METHYL-5'-THIOADENOSINE phosphorylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 ITVEGP 8
IT+EGP
Sbjct: 159 ITIEGP 164


>sp|RL6_METTH|LARGE ribosomal subunit protein uL6|Methanothermobacter

Query: 2 GITVEGP 8
G+TV+GP
Sbjct: 24 GVTVKGP 30


>sp|MCH_HALHT|MESACONYL-COA hydratase|Haloarcula hispanica (strain ATCC 33960

Query: 1 LGITVEGPSE 10
+GITVE SE
Sbjct: 96 MGITVEDLSE 105


>sp|RL11_NATPD|LARGE ribosomal subunit protein uL11|Natronomonas pharaonis (strain ATCC

Query: 1 LGITVEG 7
LG+T+EG
Sbjct: 131 LGVTIEG 137


>sp|RL11_HALSA|LARGE ribosomal subunit protein uL11|Halobacterium salinarum (strain ATCC

Query: 1 LGITVEG 7
LG+T+EG
Sbjct: 131 LGVTIEG 137


>sp|RL11_HALS3|LARGE ribosomal subunit protein uL11|Halobacterium salinarum (strain ATCC

Query: 1 LGITVEG 7
LG+T+EG
Sbjct: 131 LGVTIEG 137


>sp|RL11_HALVD|LARGE ribosomal subunit protein uL11|Haloferax volcanii (strain ATCC

Query: 1 LGITVEG 7
LG+T+EG
Sbjct: 131 LGVTIEG 137


>sp|RL11_HALMA|LARGE ribosomal subunit protein uL11|Haloarcula marismortui (strain ATCC

Query: 1 LGITVEG 7
LG+T+EG
Sbjct: 131 LGVTIEG 137


>sp|RL11_HALLT|LARGE ribosomal subunit protein uL11|Halorubrum lacusprofundi (strain

Query: 1 LGITVEG 7
LG+T+EG
Sbjct: 131 LGVTIEG 137


>sp|UVRC_NATPD|UVRABC system protein C|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LGITVEGPS 9
LG+ VEG S
Sbjct: 252 LGVAVEGES 260


>sp|RL11_PICTO|LARGE ribosomal subunit protein uL11|Picrophilus torridus (strain ATCC

Query: 1 LGITVEG 7
LGITV+G
Sbjct: 132 LGITVDG 138


>sp|RL11_KORCO|LARGE ribosomal subunit protein uL11|Korarchaeum cryptofilum (strain

Query: 1 LGITVEG 7
+G+TVEG
Sbjct: 132 MGVTVEG 138




274|Sequence|1366|1375|EGPSESKINC

>sp|IF2P_PYRAR|PROBABLE translation initiation factor IF-2|Pyrobaculum arsenaticum (strain

Query: 1 EGPSESKI 8
EGP E+K+
Sbjct: 273 EGPKEAKV 280




275|Sequence|1371|1380|SKINCRDNKD

***** No hits found ******


276|Sequence|1376|1385|RDNKDGSCSA

>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 3 NKDGSC 8
NKDG+C
Sbjct: 700 NKDGTC 705


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 3 NKDGSC 8
NKDG+C
Sbjct: 705 NKDGTC 710


>sp|FLAA_METVO|FLAGELLIN A|Methanococcus voltae

Query: 3 NKDGSCSA 10
+ DGSC+A
Sbjct: 152 DDDGSCTA 159


>sp|Y2028_ARCFU|UNCHARACTERIZED protein AF_2028|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 DGSCSA 10
DGSCSA
Sbjct: 94 DGSCSA 99


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 3 NKDGSC 8
NKDG+C
Sbjct: 699 NKDGTC 704




277|Sequence|1381|1390|GSCSAEYIPF

>sp|YAC1_METSH|UNCHARACTERIZED 16.9 kDa protein in|Methanothrix soehngenii (Methanosaeta

Query: 3 CSAEYIPF 10
CSA YI F
Sbjct: 80 CSANYIQF 87


>sp|RS17_HALSA|SMALL ribosomal subunit protein uS17|Halobacterium salinarum (strain

Query: 1 GSCSAEYIPF 10
G+CS E PF
Sbjct: 12 GTCSDEDCPF 21


>sp|RS17_HALS3|SMALL ribosomal subunit protein uS17|Halobacterium salinarum (strain

Query: 1 GSCSAEYIPF 10
G+CS E PF
Sbjct: 12 GTCSDEDCPF 21


>sp|GCSPB_THEVO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 GSCSAEYIP 9
GSC+ +Y P
Sbjct: 74 GSCTMKYNP 82


>sp|GCSPB_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 GSCSAEYIP 9
GSC+ +Y P
Sbjct: 78 GSCTMKYNP 86


>sp|GCSPB_THEKO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 GSCSAEYIP 9
GSC+ +Y P
Sbjct: 78 GSCTMKYNP 86


>sp|GCSPB_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 GSCSAEYIP 9
GSC+ +Y P
Sbjct: 78 GSCTMKYNP 86


>sp|GCSPB_THEAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 GSCSAEYIP 9
GSC+ +Y P
Sbjct: 74 GSCTMKYNP 82


>sp|GCSPB_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 1 GSCSAEYIP 9
GSC+ +Y P
Sbjct: 81 GSCTMKYNP 89


>sp|GCSPB_STAMF|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Staphylothermus

Query: 1 GSCSAEYIP 9
GSC+ +Y P
Sbjct: 83 GSCTMKYNP 91


>sp|GCSPB_SACS2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 GSCSAEYIP 9
GSC+ +Y P
Sbjct: 84 GSCTMKYNP 92


>sp|GCSPB_SACI7|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 GSCSAEYIP 9
GSC+ +Y P
Sbjct: 85 GSCTMKYNP 93


>sp|GCSPB_SACI6|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 GSCSAEYIP 9
GSC+ +Y P
Sbjct: 85 GSCTMKYNP 93


>sp|GCSPB_SACI4|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 GSCSAEYIP 9
GSC+ +Y P
Sbjct: 85 GSCTMKYNP 93


>sp|GCSPB_SACI3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 GSCSAEYIP 9
GSC+ +Y P
Sbjct: 85 GSCTMKYNP 93


>sp|GCSPB_SACI2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 GSCSAEYIP 9
GSC+ +Y P
Sbjct: 85 GSCTMKYNP 93


>sp|GCSPB_SACI1|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 GSCSAEYIP 9
GSC+ +Y P
Sbjct: 85 GSCTMKYNP 93


>sp|GCSPB_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 1 GSCSAEYIP 9
GSC+ +Y P
Sbjct: 78 GSCTMKYNP 86


>sp|GCSPB_PYRFU|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 1 GSCSAEYIP 9
GSC+ +Y P
Sbjct: 78 GSCTMKYNP 86


>sp|GCSPB_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 1 GSCSAEYIP 9
GSC+ +Y P
Sbjct: 78 GSCTMKYNP 86


>sp|GCSPB_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 1 GSCSAEYIP 9
GSC+ +Y P
Sbjct: 83 GSCTMKYNP 91


>sp|GCSPB_HALSA|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Halobacterium

Query: 1 GSCSAEYIP 9
GSC+ +Y P
Sbjct: 76 GSCTMKYNP 84


>sp|NNR_METHJ|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanospirillum hungatei JF-1

Query: 2 SCSAEYIPF 10
SCS IPF
Sbjct: 117 SCSVTSIPF 125


>sp|BRIX_PYRAE|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrobaculum

Query: 2 SCSAEYIPF 10
+C A YI F
Sbjct: 52 ACGARYIAF 60


>sp|NUCS_AERPE|ENDONUCLEASE NucS|Aeropyrum pernix (strain ATCC 700893

Query: 1 GSCSAEY 7
G CS+EY
Sbjct: 40 GVCSSEY 46




278|Sequence|1386|1395|EYIPFAPGDY

>sp|Y759_PYRIL|UPF0210 protein Pisl_0759|Pyrobaculum islandicum (strain DSM 4184

Query: 1 EYIPFAPGDY 10
E +PF PG Y
Sbjct: 190 EDVPFMPGAY 199


>sp|Y1033_PYRAR|UPF0210 protein Pars_1033|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 EYIPFAPGDY 10
E +PF PG Y
Sbjct: 190 EDVPFMPGAY 199


>sp|Y3581_PYRAE|UPF0210 protein PAE3581|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EYIPFAPGDY 10
E +PF PG Y
Sbjct: 190 EDVPFMPGAY 199


>sp|RS4_NANEQ|SMALL ribosomal subunit protein uS4|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 EYIPFAP 7
E++PF+P
Sbjct: 152 EFVPFSP 158


>sp|GMS_METOI|GMGT synthase|Methanothermococcus okinawensis (strain DSM 14208

Query: 2 YIPFAPGDY 10
YIP GDY
Sbjct: 286 YIPVGVGDY 294


>sp|HISX_HALSA|HISTIDINOL dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 2 YIPFAPGDY 10
Y P A GDY
Sbjct: 348 YAPVAAGDY 356


>sp|HISX_HALMA|HISTIDINOL dehydrogenase|Haloarcula marismortui (strain ATCC 43049

Query: 2 YIPFAPGDY 10
Y P A GDY
Sbjct: 347 YSPVAAGDY 355


>sp|RS4E_METHJ|SMALL ribosomal subunit protein eS4|Methanospirillum hungatei JF-1

Query: 1 EYIPFAPGD 9
++ PF PG+
Sbjct: 168 DHFPFQPGN 176


>sp|KORA_METTM|2-OXOGLUTARATE synthase subunit KorA|Methanothermobacter marburgensis (strain ATCC

Query: 1 EYIPFAP-GDY 10
E+IPF P GD+
Sbjct: 200 EFIPFKPQGDF 210


>sp|CHEB2_METMA|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 2|Methanosarcina mazei

Query: 6 APGDY 10
APGDY
Sbjct: 249 APGDY 253


>sp|DNLI_HALVD|DNA ligase|Haloferax volcanii (strain ATCC 29605

Query: 4 PFAPGD 9
P++PGD
Sbjct: 438 PYSPGD 443


>sp|GLME_HALMA|GLUTAMATE mutase epsilon subunit|Haloarcula marismortui (strain ATCC 43049

Query: 3 IPFAPGD 9
+PFAP D
Sbjct: 397 VPFAPSD 403


>sp|SYK_HALSA|LYSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 EYIPFAP 7
EY+PF P
Sbjct: 191 EYVPFNP 197


>sp|BIOY_METTH|PROBABLE biotin transporter BioY|Methanothermobacter thermautotrophicus

Query: 3 IPFAPGD 9
+PF PGD
Sbjct: 116 LPFIPGD 122


>sp|GPI_THEKO|GLUCOSE-6-PHOSPHATE isomerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EYIPFAPG 8
E+IP PG
Sbjct: 118 EWIPMGPG 125


>sp|SYR_HALSA|ARGININE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 YIPFAPGDY 10
YIP P DY
Sbjct: 319 YIPVYPDDY 327


>sp|ARLMC_PYRFU|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus furiosus

Query: 1 EYIPFAPGDY 10
EY PFA Y
Sbjct: 200 EYFPFADSVY 209


>sp|SYP_AERPE|PROLINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 IPFAPGD 9
IP PGD
Sbjct: 296 IPITPGD 302


>sp|Y336_METJA|UNCHARACTERIZED protein MJ0336|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PFAPGDY 10
APGDY
Sbjct: 78 SIAPGDY 84


>sp|TRPE2_HALSA|ANTHRANILATE synthase component 1 2|Halobacterium salinarum (strain ATCC 700922

Query: 4 PFAPGD 9
PF PGD
Sbjct: 148 PFTPGD 153


>sp|FDHA_METFO|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanobacterium formicicum

Query: 1 EYIPFAPG 8
+YIPF G
Sbjct: 206 QYIPFKTG 213


>sp|SYK_NATPD|LYSINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EYIPFAP 7
EY+PF P
Sbjct: 189 EYVPFFP 195


>sp|GPI_THEGJ|GLUCOSE-6-PHOSPHATE isomerase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 EYIPFAPG 8
E+IP PG
Sbjct: 118 EWIPMEPG 125




279|Sequence|1391|1400|APGDYDVNIT

>sp|GCSPA_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 2 PGDYDVNIT 10
PG+Y+++IT
Sbjct: 256 PGEYEIDIT 264


>sp|CHEB_PYRAB|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Pyrococcus abyssi

Query: 1 APGDYDVNIT 10
APGDY + +T
Sbjct: 238 APGDYHMEVT 247


>sp|CHEB_THEKO|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Thermococcus

Query: 1 APGDYDVNIT 10
APGDY + +T
Sbjct: 237 APGDYHMEVT 246


>sp|CHEB_PYRHO|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Pyrococcus horikoshii

Query: 1 APGDYDVNIT 10
APGDY + +T
Sbjct: 238 APGDYHMEVT 247


>sp|ARCSA_THEKO|ARCHAEOSINE synthase subunit alpha|Thermococcus kodakarensis (strain ATCC

Query: 2 PGDYDVNI 9
PG+YD N+
Sbjct: 46 PGEYDFNL 53


>sp|PRIS_THEVO|DNA primase small subunit PriS|Thermoplasma volcanium (strain ATCC

Query: 3 GDYDVNI 9
GDYD+N+
Sbjct: 287 GDYDINV 293


>sp|Y1032_METJA|UNCHARACTERIZED protein MJ1032|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PGDYDVN 8
PGD DVN
Sbjct: 48 PGDSDVN 54


>sp|RF1_THESM|PEPTIDE chain release factor subunit|Thermococcus sibiricus (strain DSM

Query: 2 PGDYDVN 8
P DYD+N
Sbjct: 34 PADYDLN 40


>sp|AROD_METTH|3-DEHYDROQUINATE dehydratase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 APGDYDVNIT 10
APG DV++T
Sbjct: 201 APGQMDVDVT 210


>sp|CHEB2_METMA|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 2|Methanosarcina mazei

Query: 1 APGDYDVNI 9
APGDY + I
Sbjct: 249 APGDYHMEI 257


>sp|SYR_METJA|ARGININE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GDYDVNI 9
GDY VNI
Sbjct: 36 GDYSVNI 42


>sp|AROD_METST|3-DEHYDROQUINATE dehydratase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 APGDYDVNIT 10
APG +DV T
Sbjct: 216 APGQFDVKTT 225


>sp|DTDA_NATPD|D-AMINOACYL-TRNA deacylase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 APGDYDVNI 9
AP DYDV I
Sbjct: 127 APDDYDVGI 135


>sp|DPOL_METVO|DNA polymerase|Methanococcus voltae

Query: 3 GDYDVN 8
GDYD+N
Sbjct: 781 GDYDIN 786


>sp|Y1225_ARCFU|UNCHARACTERIZED protein AF_1225|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PGDYDVNI 9
PG+Y+V I
Sbjct: 52 PGEYEVKI 59


>sp|DHQS_METMA|3-DEHYDROQUINATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PGDYDVN 8
PG +DVN
Sbjct: 84 PGSFDVN 90


>sp|RGYRB_METKA|REVERSE gyrase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 1 APGDYDVNIT 10
+ GD+DV IT
Sbjct: 252 SSGDFDVLIT 261


>sp|FLAB1_NATMM|FLAGELLIN B1|Natrialba magadii (strain ATCC 43099

Query: 1 APGDYDV 7
APG YD+
Sbjct: 153 APGSYDI 159


>sp|SLAB_ACIAM|S-LAYER protein B|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 PGDYDVNIT 10
PG Y+V I+
Sbjct: 117 PGQYNVTIS 125


>sp|DHQS_METAC|3-DEHYDROQUINATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PGDYDVN 8
PG +D+N
Sbjct: 84 PGSFDIN 90


>sp|GSA_PYRAE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PGDYDVNIT 10
P Y+VN T
Sbjct: 387 PSQYEVNFT 395


>sp|SYR_METM6|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 3 GDYDVNIT 10
GDY NI+
Sbjct: 36 GDYSTNIS 43


>sp|SYR_METM5|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 GDYDVNIT 10
GDY NI+
Sbjct: 36 GDYSTNIS 43


>sp|RPO3_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum aerophilum (strain ATCC

Query: 3 GDYDVN 8
G+YDVN
Sbjct: 224 GNYDVN 229


>sp|PUR2_PYRFU|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GDYDVN 8
GD+DVN
Sbjct: 432 GDFDVN 437


>sp|SYR_METM7|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 GDYDVNIT 10
GDY NI+
Sbjct: 36 GDYSTNIS 43


>sp|SYR_METAR|ARGININE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 PGDYDVNI 9
PG+YD ++
Sbjct: 467 PGEYDASM 474


>sp|RPA_METTH|REPLICATION factor A|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 PGDYDV 7
PG+YDV
Sbjct: 277 PGEYDV 282


>sp|SYR_METMP|ARGININE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 GDYDVNIT 10
GDY NI+
Sbjct: 36 GDYSTNIS 43


>sp|SYR_META3|ARGININE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 GDYDVNIT 10
GDY NI+
Sbjct: 36 GDYSTNIS 43


>sp|GSA_PYRCJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 APGDYDVNIT 10
AP ++VN T
Sbjct: 401 APSQFEVNFT 410


>sp|DTDA_HALWD|D-AMINOACYL-TRNA deacylase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 APGDYDVNI 9
AP YDV I
Sbjct: 122 APSKYDVGI 130


>sp|SYH_HALMA|HISTIDINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 PGDYD 6
PGDYD
Sbjct: 422 PGDYD 426


>sp|GSA_CALMQ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 PGDYDVNIT 10
P Y+VN T
Sbjct: 394 PSQYEVNFT 402


>sp|SERA_METJA|D-3-PHOSPHOGLYCERATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GDYDVNI 9
GDY +NI
Sbjct: 472 GDYGINI 478


>sp|IDH_CALNO|ISOCITRATE dehydrogenase [NADP]|Caldococcus noboribetus

Query: 2 PGDYDVNIT 10
PG+Y+V +T
Sbjct: 294 PGEYNVIVT 302


>sp|RTCA_METKA|RNA 3'-terminal phosphate cyclase|Methanopyrus kandleri (strain AV19 /

Query: 2 PGDYDVNI 9
P DY++N+
Sbjct: 130 PVDYEINV 137


>sp|PYRG_SULTO|CTP synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 DYDVNIT 10
+YDVN+T
Sbjct: 239 NYDVNMT 245


>sp|TIAS_THEVO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermoplasma volcanium (strain

Query: 1 APGDYDV 7
+PG YDV
Sbjct: 404 SPGKYDV 410


>sp|GSA_PYRNV|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 APGDYDVNIT 10
AP Y+ N T
Sbjct: 386 APSQYETNFT 395


>sp|GSA_PYRIL|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 APGDYDVNIT 10
AP Y+ N T
Sbjct: 386 APSQYETNFT 395


>sp|CPKA_THEKO|CARBAMATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 GDYDVNIT 10
GDY+V IT
Sbjct: 43 GDYEVVIT 50


>sp|CCA_HALSA|CCA-ADDING enzyme|Halobacterium salinarum (strain ATCC 700922

Query: 1 APGDYDVNI 9
A GDYDV +
Sbjct: 420 ASGDYDVYV 428


>sp|CCA_HALS3|CCA-ADDING enzyme|Halobacterium salinarum (strain ATCC 29341

Query: 1 APGDYDVNI 9
A GDYDV +
Sbjct: 420 ASGDYDVYV 428


>sp|AROD_HALWD|3-DEHYDROQUINATE dehydratase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 APGDYDV 7
APG YD+
Sbjct: 221 APGQYDI 227


>sp|NIFD_METTH|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 4 DYDVNI 9
DYDVN+
Sbjct: 210 DYDVNL 215


>sp|HMGCS_AERPE|HYDROXYMETHYLGLUTARYL-COA synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 APGDYDVNI 9
+PGD+D I
Sbjct: 237 SPGDFDYAI 245


>sp|DNAK_METBU|CHAPERONE protein DnaK|Methanococcoides burtonii (strain DSM 6242

Query: 3 GDYDVNIT 10
GDY VN++
Sbjct: 76 GDYKVNLS 83




280|Sequence|1396|1405|DVNITYGGAH

>sp|ASST_METJA|L-ASPARTATE semialdehyde sulfurtransferase|Methanocaldococcus jannaschii

Query: 1 DVNITYGGAH 10
DV+I YGGAH
Sbjct: 102 DVDIDYGGAH 111


>sp|CUTB_SULAC|GLYCERALDEHYDE dehydrogenase medium chain|Sulfolobus acidocaldarius (strain ATCC

Query: 1 DVNITYGGAH 10
D+ + YGG H
Sbjct: 209 DIKLAYGGVH 218


>sp|ASST_METAC|L-ASPARTATE semialdehyde sulfurtransferase|Methanosarcina acetivorans (strain

Query: 4 ITYGGAH 10
I YGGAH
Sbjct: 103 IQYGGAH 109


Query: 3 NITYGGA 9
N+TY GA
Sbjct: 185 NVTYSGA 191


>sp|AMPPA_THEON|AMP phosphorylase|Thermococcus onnurineus (strain NA1)

Query: 1 DVNITYGG 8
+V ITYGG
Sbjct: 314 EVAITYGG 321


>sp|AMPPA_PYRHO|AMP phosphorylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DVNITYGG 8
+V ITYGG
Sbjct: 314 EVAITYGG 321


>sp|AMPPA_PYRAB|AMP phosphorylase|Pyrococcus abyssi (strain GE5 /

Query: 1 DVNITYGG 8
+V ITYGG
Sbjct: 314 EVAITYGG 321


>sp|AMPPA_PYRFU|AMP phosphorylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DVNITYGG 8
+V ITYGG
Sbjct: 314 EVAITYGG 321


>sp|AMPPA_THEGJ|AMP phosphorylase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 DVNITYGG 8
+V ITYGG
Sbjct: 314 EVAITYGG 321


>sp|AMPPA_THEKO|AMP phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DVNITYGG 8
+V ITYGG
Sbjct: 314 EVAITYGG 321


>sp|SYY_THEVO|TYROSINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DVNITYGG 8
DV+I +GG
Sbjct: 167 DVDIAFGG 174


>sp|ENO2_METHJ|ENOLASE 2|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 VNITYGGAH 10
+NI GGAH
Sbjct: 146 MNIMNGGAH 154


>sp|RPO1C_HALMO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Halococcus morrhuae (Micrococcus

Query: 1 DVNITYGGA 9
DVN+ GGA
Sbjct: 376 DVNLRMGGA 384


>sp|GPMI1_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina barkeri (strain Fusaro /

Query: 4 ITYGGAH 10
++YGG H
Sbjct: 122 VSYGGVH 128


>sp|GPMI_METMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 ITYGGAH 10
++YGG H
Sbjct: 125 VSYGGVH 131


>sp|GPMI2_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina acetivorans (strain ATCC

Query: 4 ITYGGAH 10
++YGG H
Sbjct: 125 VSYGGVH 131


>sp|CYAS_METBU|CYSTEATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DVNITYGG 8
D+NIT+ G
Sbjct: 82 DLNITFNG 89


>sp|PSTB_METBU|PHOSPHATE import ATP-binding protein PstB|Methanococcoides burtonii (strain

Query: 1 DVNITYGGAH 10
D+N+ YG H
Sbjct: 14 DLNLWYGEKH 23


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 DVNITYGGAH 10
DVN TY G +
Sbjct: 6317 DVNTTYNGGN 6326


>sp|HTPX_PYRIL|PROTEASE HtpX homolog|Pyrobaculum islandicum (strain DSM 4184

Query: 2 VNITYGG 8
+N+TYG
Sbjct: 101 INVTYGA 107


>sp|SYY_HALMA|TYROSINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 DVNITYGG 8
D +I YGG
Sbjct: 174 DADIAYGG 181


>sp|ENO1_METHJ|ENOLASE 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 VNITYGGAH 10
+NI GGAH
Sbjct: 145 MNILNGGAH 153


>sp|HIS3_HALSA|PHOSPHORIBOSYL-AMP cyclohydrolase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DVNITYGGA 9
DV++ +GGA
Sbjct: 5 DVDLDFGGA 13


>sp|HIS3_HALS3|PHOSPHORIBOSYL-AMP cyclohydrolase|Halobacterium salinarum (strain ATCC 29341

Query: 1 DVNITYGGA 9
DV++ +GGA
Sbjct: 5 DVDLDFGGA 13


>sp|SYY_NATPD|TYROSINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DVNITYGG 8
D +I YGG
Sbjct: 175 DADIAYGG 182




281|Sequence|1401|1410|YGGAHIPGSP

>sp|RNJL_SACS2|RNASE aCSPSF2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YGGAHIPGS 9
Y HIPGS
Sbjct: 209 YNAGHIPGS 217


>sp|Y1389_PYRHO|UPF0111 protein PH1389|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YGGAHIPGS 9
YGGA +P S
Sbjct: 68 YGGAFLPAS 76


>sp|DNAG_PICTO|DNA primase DnaG|Picrophilus torridus (strain ATCC 700027

Query: 1 YGGAHIPGSP 10
YG H+P P
Sbjct: 157 YGEEHLPAGP 166


>sp|MTRA_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanosarcina barkeri (strain

Query: 3 GAHIPGSP 10
G+H+PG P
Sbjct: 33 GSHLPGQP 40


>sp|PYCA_METJA|PYRUVATE carboxylase subunit A|Methanocaldococcus jannaschii (strain ATCC

Query: 1 YGGAHIP 7
YGGA IP
Sbjct: 372 YGGAEIP 378


>sp|RL37A_METS3|LARGE ribosomal subunit protein eL43|Methanobrevibacter smithii (strain

Query: 2 GGAHIPGSP 10
GGA++P +P
Sbjct: 65 GGAYVPETP 73


>sp|PRIS_METBU|DNA primase small subunit PriS|Methanococcoides burtonii (strain DSM

Query: 5 HIPGSP 10
HIPG+P
Sbjct: 103 HIPGAP 108


>sp|LADH_METVS|LACTALDEHYDE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 1 YGGAHIPGSP 10
YGG + GSP
Sbjct: 416 YGGVIVNGSP 425


>sp|NIFB_METIM|FEMO cofactor biosynthesis protein NifB|Methanocaldococcus infernus

Query: 1 YGGAHIPGSP 10
YG H+P +P
Sbjct: 25 YGRVHLPVAP 34


>sp|Y047_METJA|PROBABLE RNase MJ4|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YGGAHIPGS 9
+ HIPGS
Sbjct: 139 FSAGHIPGS 147


>sp|NTPTH_THEKO|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GGAHIPGSP 10
G +H+PG P
Sbjct: 68 GTSHLPGVP 76


>sp|ASST_METAC|L-ASPARTATE semialdehyde sulfurtransferase|Methanosarcina acetivorans (strain

Query: 1 YGGAHI 6
YGGAH+
Sbjct: 105 YGGAHV 110


>sp|PELO_HYPBU|PROTEIN pelota homolog|Hyperthermus butylicus (strain DSM 5456

Query: 2 GGAHIPG 8
GG H+PG
Sbjct: 158 GGLHLPG 164


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 GAHIPGSP 10
G HI GSP
Sbjct: 79 GWHITGSP 86


>sp|MTRA_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanosarcina mazei (strain ATCC

Query: 3 GAHIPGSP 10
G+H+PG P
Sbjct: 33 GSHLPGKP 40


>sp|CPS_METS3|CARBAMOYL-PHOSPHATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 YGGAHIPGSP 10
Y G ++P SP
Sbjct: 192 YNGEYVPLSP 201


>sp|DNAG_THEPD|DNA primase DnaG|Thermofilum pendens (strain DSM 2475

Query: 1 YGGAHIPGSP 10
YG +PG P
Sbjct: 156 YGEEKLPGGP 165


>sp|DTDA_METKA|D-AMINOACYL-TRNA deacylase|Methanopyrus kandleri (strain AV19 /

Query: 5 HIPGSP 10
H+PG+P
Sbjct: 92 HVPGNP 97


>sp|TRM56_METS3|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanobrevibacter smithii

Query: 2 GGAHIPG 8
GGA +PG
Sbjct: 111 GGAKVPG 117


>sp|LON_METBF|LON protease|Methanosarcina barkeri (strain Fusaro /

Query: 2 GGAHIPGSP 10
GG+H P +P
Sbjct: 288 GGSHNPEAP 296


>sp|PGMI_THEVO|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Thermoplasma volcanium

Query: 1 YGGAHIP 7
Y G HIP
Sbjct: 169 YNGEHIP 175


>sp|ASST_METJA|L-ASPARTATE semialdehyde sulfurtransferase|Methanocaldococcus jannaschii

Query: 1 YGGAHI 6
YGGAH+
Sbjct: 107 YGGAHV 112


>sp|PURE_PYRHO|N5-CARBOXYAMINOIMIDAZOLE ribonucleotide mutase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GGAHIPG 8
G AH+PG
Sbjct: 74 GAAHLPG 80


>sp|KADA_PYRAE|ADENYLATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GGAHIPGSP 10
GG + PG P
Sbjct: 90 GGGYYPGLP 98


>sp|RL37A_METST|LARGE ribosomal subunit protein eL43|Methanosphaera stadtmanae (strain

Query: 2 GGAHIPGSP 10
GGA+IP +P
Sbjct: 65 GGAYIPTTP 73


>sp|RS7_METLZ|SMALL ribosomal subunit protein uS7|Methanocorpusculum labreanum (strain

Query: 1 YGGAHIPGS 9
YGG ++P S
Sbjct: 120 YGGINVPKS 128


>sp|RS7_METHJ|SMALL ribosomal subunit protein uS7|Methanospirillum hungatei JF-1

Query: 1 YGGAHIPGS 9
YGG ++P S
Sbjct: 120 YGGINVPKS 128


>sp|RS7_METB6|SMALL ribosomal subunit protein uS7|Methanoregula boonei (strain DSM

Query: 1 YGGAHIPGS 9
YGG ++P S
Sbjct: 130 YGGINVPKS 138


>sp|MCRB_METFE|METHYL-COENZYME M reductase subunit beta|Methanothermus fervidus

Query: 3 GAHIPG 8
G HIPG
Sbjct: 66 GCHIPG 71


>sp|PURE_SACS2|N5-CARBOXYAMINOIMIDAZOLE ribonucleotide mutase|Saccharolobus solfataricus (strain ATCC

Query: 2 GGAHIPG 8
G AH+PG
Sbjct: 66 GAAHLPG 72


>sp|PURE_PYRAB|N5-CARBOXYAMINOIMIDAZOLE ribonucleotide mutase|Pyrococcus abyssi (strain GE5 /

Query: 2 GGAHIPG 8
G AH+PG
Sbjct: 71 GAAHLPG 77


>sp|KGSDH_SACS2|2,5-DIOXOPENTANOATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YGGAHIPG 8
YGG IPG
Sbjct: 349 YGGNIIPG 356


>sp|THTR_HALVD|PUTATIVE thiosulfate sulfurtransferase|Haloferax volcanii (strain ATCC 29605

Query: 3 GAHIPGS 9
G HIPG+
Sbjct: 196 GGHIPGA 202


>sp|HTPX_THEGJ|PROTEASE HtpX homolog|Thermococcus gammatolerans (strain DSM 15229

Query: 2 GGAHIPGSP 10
GGA I G P
Sbjct: 213 GGARISGKP 221


>sp|RL37A_THESM|LARGE ribosomal subunit protein eL43|Thermococcus sibiricus (strain DSM

Query: 2 GGAHIPGSP 10
GGA++P +P
Sbjct: 65 GGAYLPATP 73


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GGAHIPGS 9
GG H+P +
Sbjct: 718 GGTHLPST 725


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GGAHIPGS 9
GG H+P +
Sbjct: 718 GGTHLPST 725


>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 GGAHIPGS 9
GG H+P +
Sbjct: 718 GGTHLPST 725


>sp|SYA_THEKO|ALANINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GGAHIPGS 9
GG H+P +
Sbjct: 720 GGTHLPNT 727


>sp|KHSE_THEAC|HOMOSERINE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GGAHIPGSP 10
GGA + GSP
Sbjct: 299 GGAFVEGSP 307


>sp|MSRA_SACS2|PEPTIDE methionine sulfoxide reductase MsrA|Saccharolobus solfataricus

Query: 1 YGGAHIP 7
Y G H+P
Sbjct: 31 YSGGHVP 37


>sp|TRM56_METTH|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanothermobacter

Query: 2 GGAHIPG 8
GGA +PG
Sbjct: 110 GGARVPG 116


>sp|KAE1B_THEVO|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 YGGAHIPGSP 10
Y G PG P
Sbjct: 165 YAGIPFPGGP 174


>sp|HTPX_THEKO|PROTEASE HtpX homolog|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GGAHIPGSP 10
GGA I G P
Sbjct: 214 GGARISGKP 222


>sp|GLYA_PICTO|SERINE hydroxymethyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 YGGAHIPG 8
Y GAH+ G
Sbjct: 200 YDGAHVAG 207


>sp|AATA_IGNH4|A-TYPE ATP synthase subunit A|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 GGAHIPGSP 10
G A IPG P
Sbjct: 379 GRARIPGRP 387


>sp|ILVD_METB6|DIHYDROXY-ACID dehydratase|Methanoregula boonei (strain DSM 21154

Query: 2 GGAHIPGS 9
GGA +PGS
Sbjct: 145 GGAMLPGS 152


>sp|RL37A_THEGJ|LARGE ribosomal subunit protein eL43|Thermococcus gammatolerans (strain

Query: 2 GGAHIPGSP 10
GGA++P +P
Sbjct: 65 GGAYLPTTP 73


>sp|RL37A_THEKO|LARGE ribosomal subunit protein eL43|Thermococcus kodakarensis (strain

Query: 2 GGAHIPGSP 10
GGA++P +P
Sbjct: 65 GGAYLPTTP 73


>sp|RSGA_METMA|SMALL ribosomal subunit biogenesis GTPase|Methanosarcina mazei (strain

Query: 1 YGGAHIPG 8
Y G+++PG
Sbjct: 32 YKGSYVPG 39


>sp|MTRA_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanosarcina acetivorans (strain

Query: 3 GAHIPGSP 10
+H+PG P
Sbjct: 33 ASHLPGKP 40


>sp|ILVD_PICTO|DIHYDROXY-ACID dehydratase|Picrophilus torridus (strain ATCC 700027

Query: 1 YGGAHIPG 8
YGG+ +PG
Sbjct: 141 YGGSTLPG 148


>sp|ILVD_METS5|DIHYDROXY-ACID dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 1 YGGAHIPGS 9
YGG +PG+
Sbjct: 145 YGGTTLPGN 153


>sp|GLYA_META3|SERINE hydroxymethyltransferase|Methanococcus aeolicus (strain ATCC

Query: 1 YGGAHIPG 8
Y GAH+ G
Sbjct: 195 YDGAHVLG 202


>sp|ILVD_SULTO|DIHYDROXY-ACID dehydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YGGAHIPGS 9
YGG +PG+
Sbjct: 147 YGGTTLPGN 155


>sp|RL37A_PYRHO|LARGE ribosomal subunit protein eL43|Pyrococcus horikoshii (strain ATCC

Query: 2 GGAHIPGSP 10
GGA++P +P
Sbjct: 65 GGAYLPVTP 73




282|Sequence|1406|1415|IPGSPFRVPV

>sp|MTMB_METMA|MONOMETHYLAMINE methyltransferase MtmB|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IPGSPFRV 8
IPGSP+ V
Sbjct: 170 IPGSPYEV 177


>sp|HTR9_HALSA|HALOBACTERIAL transducer protein 9|Halobacterium salinarum (strain ATCC 700922

Query: 3 GSPFRVPV 10
GSPF VP+
Sbjct: 9 GSPFTVPL 16


>sp|UDP_THEKO|URIDINE phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IPGSPFRVP 9
+PG P RVP
Sbjct: 34 LPGDPERVP 42


>sp|Y1289_ARCFU|PUTATIVE GTPase AF_1289|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PGSPF 6
PGSPF
Sbjct: 84 PGSPF 88


>sp|RS4_AERPE|SMALL ribosomal subunit protein uS4|Aeropyrum pernix (strain ATCC 700893

Query: 2 PGSPFR 7
PGSPF+
Sbjct: 157 PGSPFK 162


>sp|EF1A_CENSY|ELONGATION factor 1-alpha|Cenarchaeum symbiosum (strain A)

Query: 3 GSPFRVPV 10
G P RVP+
Sbjct: 233 GKPLRVPI 240


>sp|SYP_METAR|PROLINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 IPGSPFRVPV 10
+ G+PFR+ +
Sbjct: 341 MKGTPFRIEI 350


>sp|RTCA_SACS2|RNA 3'-terminal phosphate cyclase|Saccharolobus solfataricus (strain

Query: 1 IPGSPFRV 8
I G PFR+
Sbjct: 25 ITGKPFRI 32


>sp|PYRH_METTP|URIDYLATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 SPFRVP 9
+PFRVP
Sbjct: 86 APFRVP 91


>sp|UPP_METM5|URACIL phosphoribosyltransferase|Methanococcus maripaludis (strain C5 /

Query: 3 GSPFRVPV 10
G PF+VP+
Sbjct: 216 GEPFKVPM 223


>sp|RTCA_SACI1|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 1 IPGSPFRV 8
I G PFR+
Sbjct: 25 ITGKPFRI 32


>sp|RTCA_SACI7|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 1 IPGSPFRV 8
I G PFR+
Sbjct: 25 ITGKPFRI 32


>sp|RTCA_SACI6|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 1 IPGSPFRV 8
I G PFR+
Sbjct: 25 ITGKPFRI 32


>sp|RTCA_SACI4|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 1 IPGSPFRV 8
I G PFR+
Sbjct: 25 ITGKPFRI 32


>sp|RTCA_SACI3|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 1 IPGSPFRV 8
I G PFR+
Sbjct: 25 ITGKPFRI 32


>sp|RTCA_SACI2|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 1 IPGSPFRV 8
I G PFR+
Sbjct: 25 ITGKPFRI 32


>sp|CMR1A_PYRFU|CRISPR system Cmr subunit Cmr1-1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PGSPFRV 8
PGS FRV
Sbjct: 117 PGSRFRV 123




283|Sequence|1411|1420|FRVPVKDVVD

>sp|RL15_HALMA|LARGE ribosomal subunit protein uL15|Haloarcula marismortui (strain

Query: 1 FRVPVKDVVD 10
FRV V+DVV+
Sbjct: 90 FRVDVRDVVE 99


>sp|SYG_METVS|GLYCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 FRVPVKDVVD 10
FR+P+ VVD
Sbjct: 559 FRIPLDGVVD 568


>sp|DNAG_CALMQ|DNA primase DnaG|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 RVPVKDVVD 10
RVPV+D++D
Sbjct: 385 RVPVRDLLD 393


>sp|SYV_SULAC|VALINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FRVPVKDVVD 10
+R+PV +VVD
Sbjct: 317 YRLPVYEVVD 326


>sp|TRUD2_METJA|PROBABLE tRNA pseudouridine synthase D|Methanocaldococcus jannaschii

Query: 1 FRVPVKDV 8
F++P+KD+
Sbjct: 75 FKIPLKDI 82


>sp|TRM1_METPE|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaerula palustris

Query: 1 FRVPVKD 7
FR+PV+D
Sbjct: 13 FRIPVQD 19


>sp|PCP_SACI7|PYRROLIDONE-CARBOXYLATE peptidase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 VPVKDVVD 10
+PV+D+VD
Sbjct: 115 IPVEDLVD 122


>sp|PCP_SACI1|PYRROLIDONE-CARBOXYLATE peptidase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 VPVKDVVD 10
+PV+D+VD
Sbjct: 115 IPVEDLVD 122


>sp|PCP_SACI6|PYRROLIDONE-CARBOXYLATE peptidase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 VPVKDVVD 10
+PV+D+VD
Sbjct: 115 IPVEDLVD 122


>sp|PCP_SACI3|PYRROLIDONE-CARBOXYLATE peptidase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 VPVKDVVD 10
+PV+D+VD
Sbjct: 115 IPVEDLVD 122


>sp|PCP_SACI2|PYRROLIDONE-CARBOXYLATE peptidase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 VPVKDVVD 10
+PV+D+VD
Sbjct: 115 IPVEDLVD 122


>sp|PCP2_SACS2|PYRROLIDONE-CARBOXYLATE peptidase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 VPVKDVVD 10
+PV+D+VD
Sbjct: 115 IPVEDLVD 122


>sp|PCP1_SACS2|PYRROLIDONE-CARBOXYLATE peptidase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 VPVKDVVD 10
+PV+D+VD
Sbjct: 115 IPVEDLVD 122


>sp|SYR_METHJ|ARGININE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 FRVPVKDVVD 10
F++PVK +D
Sbjct: 224 FKIPVKRCLD 233


>sp|EF1A_METPE|ELONGATION factor 1-alpha|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 FRVPVKDV 8
FR+P++DV
Sbjct: 225 FRLPIQDV 232


>sp|SYDND_METLZ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 RVPVKDV 8
R+P+KDV
Sbjct: 2 RIPIKDV 8


>sp|RL15_HALSA|LARGE ribosomal subunit protein uL15|Halobacterium salinarum (strain

Query: 1 FRVPVKDVVD 10
+RV +DVVD
Sbjct: 90 YRVDARDVVD 99


>sp|RL15_HALS3|LARGE ribosomal subunit protein uL15|Halobacterium salinarum (strain

Query: 1 FRVPVKDVVD 10
+RV +DVVD
Sbjct: 90 YRVDARDVVD 99


>sp|RS4E_ARCFU|SMALL ribosomal subunit protein eS4|Archaeoglobus fulgidus (strain ATCC

Query: 1 FRVPVKDVVD 10
R+P K+VVD
Sbjct: 155 LRIPEKEVVD 164


>sp|PRIL_THEKO|DNA primase large subunit PriL|Thermococcus kodakarensis (strain ATCC

Query: 1 FRVPVKDVVD 10
+++P+KD+++
Sbjct: 148 YKIPIKDLLN 157


>sp|KDGK_SULTO|2-DEHYDRO-3-DEOXYGLUCONOKINASE tokodaii (strain DSM 16993

Query: 1 FRVPVKDV 8
++VPV+DV
Sbjct: 244 YQVPVEDV 251


>sp|QUED_METJA|PUTATIVE 6-carboxy-5,6,7,8-tetrahydropterin synthase|Methanocaldococcus

Query: 1 FRVPVKDVV 9
+ +PV+DV+
Sbjct: 99 YSIPVEDVI 107


>sp|RNFC_METAC|ION-TRANSLOCATING oxidoreductase complex subunit C|Methanosarcina acetivorans (strain

Query: 1 FRVPVKDVVD 10
F P+KDV++
Sbjct: 307 FGTPIKDVIE 316


>sp|DKFP_METJA|FRUCTOSE-BISPHOSPHATE aldolase/6-deoxy-5-ketofructose 1-phosphate

Query: 3 VPVKDVVD 10
V VKDVVD
Sbjct: 126 VHVKDVVD 133


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 RVPVKDVVD 10
R+P+ ++VD
Sbjct: 381 RIPLSEIVD 389


>sp|EF1A_CENSY|ELONGATION factor 1-alpha|Cenarchaeum symbiosum (strain A)

Query: 1 FRVPVKDV 8
RVP++DV
Sbjct: 236 LRVPIQDV 243


>sp|EF1A_METAR|ELONGATION factor 1-alpha|Methanocella arvoryzae (strain DSM 22066

Query: 1 FRVPVKDV 8
RVP++DV
Sbjct: 225 LRVPIQDV 232


>sp|DNAG_DESA1|DNA primase DnaG|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 RVPVKDVV 9
R+PV+D+V
Sbjct: 341 RIPVRDLV 348


>sp|IF6_NANEQ|TRANSLATION initiation factor 6|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 FRVPVKDVVD 10
FRV V DVV+
Sbjct: 88 FRVEVVDVVN 97


>sp|EF1A_THEVO|ELONGATION factor 1-alpha|Thermoplasma volcanium (strain ATCC 51530

Query: 1 FRVPVKDV 8
RVPV+DV
Sbjct: 227 LRVPVEDV 234


>sp|EF1A_METTP|ELONGATION factor 1-alpha|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 FRVPVKDV 8
R+PV+DV
Sbjct: 227 LRIPVQDV 234


>sp|Y1127_METTP|PUTATIVE nickel insertion protein|Methanothrix thermoacetophila (strain DSM

Query: 3 VPVKDVV 9
+PVKD++
Sbjct: 370 IPVKDII 376


>sp|DNAG_STAMF|DNA primase DnaG|Staphylothermus marinus (strain ATCC 43588

Query: 2 RVPVKDVVD 10
R+PV+D+V+
Sbjct: 357 RLPVRDLVN 365


>sp|KPRS_METTH|RIBOSE-PHOSPHATE pyrophosphokinase|Methanothermobacter thermautotrophicus (strain

Query: 1 FRVPVKDV 8
FRVPV+++
Sbjct: 133 FRVPVREL 140


>sp|KHSE_META3|HOMOSERINE kinase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 VPVKDVVD 10
+P+KD+V+
Sbjct: 201 IPIKDMVN 208




284|Sequence|1416|1425|KDVVDPSKVK

>sp|Y640_PYRHO|PUTATIVE phosphate permease PH0640|Pyrococcus horikoshii (strain ATCC

Query: 1 KDVVDPSKV 9
K ++DPSK+
Sbjct: 70 KGIIDPSKI 78


>sp|Y1020_PYRFU|PUTATIVE phosphate permease PF1020|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KDVVDPSKV 9
K ++DPSK+
Sbjct: 75 KGIIDPSKI 83


>sp|Y1401_PYRAB|PUTATIVE phosphate permease PYRAB14010|Pyrococcus abyssi (strain GE5 /

Query: 1 KDVVDPSKV 9
K ++DPS++
Sbjct: 69 KGIIDPSRI 77


>sp|RPO1N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanococcus vannielii (strain ATCC

Query: 1 KDVVDPSKV 9
+D+VDPSK
Sbjct: 860 EDLVDPSKA 868


>sp|THSA_THEAC|THERMOSOME subunit alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KDVVDPSKVK 10
K VVDP +VK
Sbjct: 489 KGVVDPLRVK 498


>sp|KHSE_THEAC|HOMOSERINE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DVVDPSKV 9
D+V+PS++
Sbjct: 225 DIVEPSRI 232


>sp|Y1098_METVS|PUTATIVE transcriptional regulatory protein Mevan_1098|Methanococcus

Query: 2 DVVDPSKVK 10
D++ PSK+K
Sbjct: 59 DIIAPSKIK 67


>sp|AROB_SULTO|3-DEHYDROQUINATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 VDPSKVK 10
+DPS+VK
Sbjct: 41 IDPSRVK 47


>sp|HMGCS_SACI7|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 VDPSKVK 10
VDPSK++
Sbjct: 67 VDPSKIR 73


>sp|HMGCS_SACI2|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 VDPSKVK 10
VDPSK++
Sbjct: 67 VDPSKIR 73


>sp|HMGCS_SACI1|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 VDPSKVK 10
VDPSK++
Sbjct: 67 VDPSKIR 73


>sp|HMGCS_SACI6|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 VDPSKVK 10
VDPSK++
Sbjct: 67 VDPSKIR 73


>sp|HMGCS_SACI4|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 VDPSKVK 10
VDPSK++
Sbjct: 67 VDPSKIR 73


>sp|HMGCS_SACI3|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 VDPSKVK 10
VDPSK++
Sbjct: 67 VDPSKIR 73


>sp|TRPD_METS5|ANTHRANILATE phosphoribosyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 1 KDVVDPSKVK 10
+D DPSK+K
Sbjct: 328 RDNGDPSKIK 337


>sp|Y1360_METJA|UNCHARACTERIZED protein MJ1360|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VVDPSKV 9
++DPSK+
Sbjct: 64 IIDPSKI 70




285|Sequence|1421|1430|PSKVKIAGPG

>sp|PELO_PYRAR|PROTEIN pelota homolog|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PSKVKIAGP 9
P KV +AGP
Sbjct: 192 PDKVVLAGP 200


>sp|GVPF1_HALSA|GAS vesicle protein F1|Halobacterium salinarum (strain ATCC 700922

Query: 4 VKIAGPG 10
VKI GPG
Sbjct: 116 VKILGPG 122


>sp|PELO_PYRAE|PROTEIN pelota homolog|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PSKVKIAGP 9
P KV + GP
Sbjct: 191 PDKVVVTGP 199


>sp|ACDB_METKA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanopyrus kandleri

Query: 1 PSKVKIAGP 9
P KV++ GP
Sbjct: 50 PDKVEVIGP 58


>sp|FPOD_METMA|F(420)H(2) dehydrogenase subunit D|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PSKVKIAGP 9
P +VK+ GP
Sbjct: 330 PYRVKVRGP 338


>sp|PELO_PYRNV|PROTEIN pelota homolog|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PSKVKIAGPG 10
P K+ +AGP
Sbjct: 189 PDKLVVAGPA 198


>sp|IF2P_THEKO|PROBABLE translation initiation factor IF-2|Thermococcus kodakarensis

Query: 4 VKIAGPG 10
VKIA PG
Sbjct: 856 VKIAAPG 862


>sp|IF2P_PYRHO|PROBABLE translation initiation factor IF-2|Pyrococcus horikoshii (strain

Query: 4 VKIAGPG 10
VKIA PG
Sbjct: 756 VKIAAPG 762


>sp|RL6_IGNH4|LARGE ribosomal subunit protein uL6|Ignicoccus hospitalis (strain

Query: 2 SKVKIAGP 9
SKVK+ GP
Sbjct: 24 SKVKVRGP 31


>sp|IF2P_PYRAB|PROBABLE translation initiation factor IF-2|Pyrococcus abyssi (strain GE5 /

Query: 4 VKIAGPG 10
VKIA PG
Sbjct: 704 VKIAAPG 710


>sp|Y582_METMA|UNCHARACTERIZED glycosyltransferase MM_0582|Methanosarcina mazei (strain ATCC

Query: 1 PSKVKIAG 8
PS++K+AG
Sbjct: 55 PSEIKLAG 62


>sp|IF2P_PYRFU|PROBABLE translation initiation factor IF-2|Pyrococcus furiosus (strain ATCC

Query: 4 VKIAGPG 10
VKIA PG
Sbjct: 696 VKIAAPG 702




286|Sequence|1426|1435|IAGPGLGSGV

>sp|PPSA_STAMF|PROBABLE phosphoenolpyruvate synthase|Staphylothermus marinus (strain ATCC

Query: 2 AGPGLGSGV 10
A PG+G+GV
Sbjct: 389 ASPGIGAGV 397


>sp|SYFB_METKA|PHENYLALANINE--TRNA ligase beta subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 IAGPGLG 7
IAGPG+G
Sbjct: 503 IAGPGVG 509


>sp|PYRE_METST|OROTATE phosphoribosyltransferase|Methanosphaera stadtmanae (strain ATCC

Query: 1 IAGPGLGS 8
IAGP LG+
Sbjct: 66 IAGPALGA 73


>sp|Y403_METJA|MEMO1 family protein MJ0403|Methanocaldococcus jannaschii (strain ATCC

Query: 1 IAGP---GLGSGV 10
I GP GLGSGV
Sbjct: 85 ILGPNHTGLGSGV 97


>sp|COFC_HALVD|2-PHOSPHO-L-LACTATE guanylyltransferase|Haloferax volcanii (strain ATCC 29605

Query: 1 IAGPGLGSG 9
+A PGLG G
Sbjct: 110 VAAPGLGGG 118


>sp|PPSA_PYRHO|PROBABLE phosphoenolpyruvate synthase|Pyrococcus horikoshii (strain ATCC

Query: 2 AGPGLGSG 9
A PG+G+G
Sbjct: 388 ASPGIGAG 395


>sp|VORB_METTM|KETOISOVALERATE oxidoreductase subunit VorB|Methanothermobacter marburgensis

Query: 2 AGPGLGS 8
AGPGLG+
Sbjct: 107 AGPGLGN 113


>sp|VORB_METTH|KETOISOVALERATE oxidoreductase subunit VorB|Methanothermobacter thermautotrophicus

Query: 2 AGPGLGS 8
AGPGLG+
Sbjct: 107 AGPGLGN 113


>sp|PYRE_METTH|OROTATE phosphoribosyltransferase|Methanothermobacter thermautotrophicus

Query: 1 IAGPGLGS 8
IAGP LG+
Sbjct: 69 IAGPALGA 76


>sp|PPSA_PYRAB|PROBABLE phosphoenolpyruvate synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 AGPGLGSG 9
A PG+G+G
Sbjct: 385 ASPGIGAG 392


>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii (strain

Query: 2 AGPGLGSGV 10
A PG+ +GV
Sbjct: 356 ASPGIATGV 364


>sp|PPSA_PYRFU|PHOSPHOENOLPYRUVATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 AGPGLGSG 9
A PG+G+G
Sbjct: 386 ASPGIGAG 393


>sp|MCRD_METBF|METHYL-COENZYME M reductase operon protein|Methanosarcina barkeri (strain Fusaro

Query: 2 AGPGLGSGV 10
AGPG G V
Sbjct: 56 AGPGTGEKV 64


>sp|SRP54_NATPD|SIGNAL recognition particle 54 kDa|Natronomonas pharaonis (strain ATCC

Query: 4 PGLGSGV 10
PGLG G+
Sbjct: 350 PGLGGGI 356


>sp|RF1_AERPE|PEPTIDE chain release factor subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 IAGPGLG 7
+AGPGL
Sbjct: 224 VAGPGLA 230


>sp|RISB_ARCFU|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IAGPGLG 7
I+GPG+G
Sbjct: 104 ISGPGMG 110


>sp|MTRC_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanopyrus kandleri (strain AV19

Query: 1 IAGPGLGSGV 10
+AG GLG+GV
Sbjct: 71 VAGYGLGTGV 80


>sp|IF2P_NATPD|PROBABLE translation initiation factor IF-2|Natronomonas pharaonis (strain

Query: 1 IAGPGLGS 8
+ GPG+G+
Sbjct: 238 VGGPGVGT 245


>sp|PYRE_PYRHO|OROTATE phosphoribosyltransferase|Pyrococcus horikoshii (strain ATCC

Query: 1 IAGPGLGS 8
IAGP LG+
Sbjct: 67 IAGPELGA 74


>sp|SRP54_HALMA|SIGNAL recognition particle 54 kDa|Haloarcula marismortui (strain ATCC

Query: 4 PGLGSGV 10
PGLG G+
Sbjct: 352 PGLGGGL 358


>sp|IF2P_METAR|PROBABLE translation initiation factor IF-2|Methanocella arvoryzae (strain

Query: 1 IAGPGLGS 8
+ GPG+G+
Sbjct: 233 VTGPGVGT 240


>sp|COFC_HALMA|2-PHOSPHO-L-LACTATE guanylyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 IAGPGLGSG 9
+ PGLG G
Sbjct: 113 VLAPGLGGG 121


>sp|APGM1_METTH|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanothermobacter thermautotrophicus

Query: 1 IAGPGLGSGV 10
+ GPGLG V
Sbjct: 153 LRGPGLGDKV 162




287|Sequence|1431|1440|LGSGVRARVL

>sp|ACYP_CALMQ|ACYLPHOSPHATASE maquilingensis (strain ATCC 700844

Query: 1 LGSGVRARVL 10
+GSGVR RV+
Sbjct: 1 MGSGVRVRVI 10


>sp|HDRB2_METJA|COB--COM heterodisulfide reductase subunit B|Methanocaldococcus jannaschii

Query: 2 GSGVRARVL 10
G GVRAR L
Sbjct: 198 GGGVRARFL 206


>sp|HDRB1_METJA|COB--COM heterodisulfide reductase subunit B|Methanocaldococcus jannaschii

Query: 2 GSGVRARVL 10
G GVRAR L
Sbjct: 197 GGGVRARNL 205


>sp|THIC_PYRAB|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 LGSGVRARV 9
+GSGVR +V
Sbjct: 55 VGSGVRVKV 63


>sp|HDRB1_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit B1|Methanococcus

Query: 2 GSGVRAR 8
G GVRAR
Sbjct: 202 GGGVRAR 208


>sp|NNR_ARCFU|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Archaeoglobus fulgidus (strain

Query: 1 LGSGVRARV 9
LG+GVR R+
Sbjct: 117 LGTGVRGRL 125


>sp|PRIS_METTH|DNA primase small subunit PriS|Methanothermobacter thermautotrophicus

Query: 1 LGSGVRARVL 10
LGS VRA +L
Sbjct: 162 LGSEVRAEIL 171


>sp|Y476_AERPE|UPF0215 protein APE_0476.1|Aeropyrum pernix (strain ATCC 700893

Query: 3 SGVRARVL 10
+GVRARVL
Sbjct: 116 AGVRARVL 123


>sp|THIC_METLZ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LGSGVRARV 9
+GSG+R +V
Sbjct: 54 IGSGLRTKV 62


>sp|SURE1_PYRAE|5'-NUCLEOTIDASE SurE 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LGSGVRARVL 10
LG GVRA+++
Sbjct: 176 LGRGVRAKLV 185


>sp|HUTH_HALSA|PROBABLE histidine ammonia-lyase|Halobacterium salinarum (strain ATCC 700922

Query: 3 SGVRARVL 10
SG+R RVL
Sbjct: 115 SGIRERVL 122


>sp|HUTH_HALS3|PROBABLE histidine ammonia-lyase|Halobacterium salinarum (strain ATCC 29341

Query: 3 SGVRARVL 10
SG+R RVL
Sbjct: 115 SGIRERVL 122


>sp|RL37A_NANEQ|LARGE ribosomal subunit protein eL43|Nanoarchaeum equitans (strain

Query: 2 GSGVRARVL 10
G G+R RVL
Sbjct: 20 GLGIRKRVL 28




288|Sequence|1436|1445|RARVLQSFTV

>sp|TIAS_THEGJ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus gammatolerans

Query: 1 RARVLQSF 8
R RVLQ+F
Sbjct: 222 RGRVLQTF 229


>sp|IDI2_HALSA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Halobacterium salinarum (strain ATCC 700922

Query: 3 RVLQSFTV 10
RVL+S+TV
Sbjct: 110 RVLESYTV 117




289|Sequence|1441|1450|QSFTVDSSKA

>sp|PURL_CALMQ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 FTVDSSKA 10
FTVD SKA
Sbjct: 636 FTVDLSKA 643




290|Sequence|1446|1455|DSSKAGLAPL

***** No hits found ******


291|Sequence|1451|1460|GLAPLEVRVL

>sp|SYTC_SULAC|THREONINE--TRNA ligase catalytic subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 2 LAPLEVRVL 10
L+P++VRVL
Sbjct: 440 LSPIQVRVL 448


>sp|KCY_METBU|CYTIDYLATE kinase|Methanococcoides burtonii (strain DSM 6242

Query: 3 APLEVRV 9
APLEVRV
Sbjct: 98 APLEVRV 104


>sp|SYT_METS3|THREONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 LAPLEVRVL 10
L+P+EVR++
Sbjct: 492 LSPIEVRII 500


>sp|SYTC_METS5|THREONINE--TRNA ligase catalytic subunit|Metallosphaera sedula (strain ATCC 51363

Query: 2 LAPLEVRVL 10
L+P++VRVL
Sbjct: 432 LSPVQVRVL 440


>sp|SYTC_SULTO|THREONINE--TRNA ligase catalytic subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LAPLEVRVL 10
L+P++VR+L
Sbjct: 431 LSPVQVRIL 439


>sp|SYT_STAMF|THREONINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 LAPLEVRVL 10
LAP++VR++
Sbjct: 495 LAPVQVRII 503


>sp|SYT_NATPD|THREONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LAPLEVRVL 10
LAP +VR+L
Sbjct: 536 LAPEQVRIL 544


>sp|SYT_HALSA|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 LAPLEVRVL 10
LAP +VR+L
Sbjct: 536 LAPEQVRIL 544


>sp|SYT_HALS3|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 LAPLEVRVL 10
LAP +VR+L
Sbjct: 536 LAPEQVRIL 544


>sp|SYT_METJA|THREONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LAPLEVRVL 10
L+P++VRV+
Sbjct: 499 LSPIQVRVI 507


>sp|SYG_PYRHO|GLYCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LAPLEVRVL 10
+AP+EV VL
Sbjct: 472 MAPIEVAVL 480


>sp|SYG_PYRAB|GLYCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 LAPLEVRVL 10
+AP+EV VL
Sbjct: 472 MAPIEVAVL 480


>sp|SYG_PYRFU|GLYCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LAPLEVRVL 10
+AP+EV VL
Sbjct: 470 MAPIEVAVL 478


>sp|SYP_METLZ|PROLINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 GLAPLEVRV 9
GL+PL+V++
Sbjct: 98 GLSPLDVKL 106


>sp|SYG_THESM|GLYCINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 2 LAPLEVRVL 10
+AP+EV VL
Sbjct: 472 MAPIEVAVL 480


>sp|SYT_NITMS|THREONINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 LAPLEVRVL 10
LAP +VR++
Sbjct: 504 LAPTQVRII 512


>sp|SYT_METST|THREONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 LAPLEVRVL 10
LAP +VR++
Sbjct: 498 LAPTQVRII 506


>sp|CYSC_PYRAB|PROBABLE adenylyl-sulfate kinase|Pyrococcus abyssi (strain GE5 /

Query: 3 APLEVRV 9
APLEVR+
Sbjct: 107 APLEVRI 113


>sp|SYDND_METMP|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus maripaludis (strain DSM 14266

Query: 4 PLEVRVL 10
P+E+RVL
Sbjct: 98 PIEIRVL 104


>sp|SYG_THEKO|GLYCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LAPLEVRVL 10
+AP+EV VL
Sbjct: 471 MAPIEVAVL 479


>sp|SYDND_METM5|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus maripaludis (strain C5 /

Query: 4 PLEVRVL 10
P+E+RVL
Sbjct: 98 PIEIRVL 104


>sp|SYG_THEGJ|GLYCINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 LAPLEVRVL 10
+AP+EV VL
Sbjct: 471 MAPIEVAVL 479


>sp|SYT_THEKO|THREONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LAPLEVRVL 10
L+P++VRV+
Sbjct: 509 LSPIQVRVI 517


>sp|SYT_PYRFU|THREONINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LAPLEVRVL 10
L+P++VRV+
Sbjct: 508 LSPIQVRVI 516


>sp|SYT_THEON|THREONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 LAPLEVRVL 10
L+P++VRV+
Sbjct: 510 LSPIQVRVI 518


>sp|SAT_PYRAB|SULFATE adenylyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 LAPLEVRVL 10
L P+E RVL
Sbjct: 167 LRPIETRVL 175


>sp|SYT_THEGJ|THREONINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 LAPLEVRVL 10
L+P++VRV+
Sbjct: 509 LSPIQVRVI 517


>sp|SYDND_METM7|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus maripaludis (strain C7 /

Query: 4 PLEVRVL 10
P+E+RVL
Sbjct: 98 PIEIRVL 104


>sp|SYDND_METM6|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus maripaludis (strain C6 /

Query: 4 PLEVRVL 10
P+E+RVL
Sbjct: 98 PIEIRVL 104


>sp|SYT_PYRHO|THREONINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LAPLEVRVL 10
L+P++VRV+
Sbjct: 508 LSPIQVRVI 516


>sp|SYT_PYRAB|THREONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 LAPLEVRVL 10
L+P++VRV+
Sbjct: 508 LSPIQVRVI 516


>sp|SYT_PYRCJ|THREONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 LAPLEVRVL 10
LAP++VR++
Sbjct: 492 LAPVQVRII 500


>sp|DEOC_AERPE|DEOXYRIBOSE-PHOSPHATE aldolase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GLAPLEVRVL 10
G APLEV+++
Sbjct: 84 GQAPLEVKLV 93


>sp|PURL_THESM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus sibiricus (strain DSM 12597

Query: 1 GLAPLEV 7
GL+PLEV
Sbjct: 638 GLSPLEV 644


>sp|SYT_THESM|THREONINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 2 LAPLEVRVL 10
L+P++VR++
Sbjct: 508 LSPIQVRII 516


>sp|SYT_METTH|THREONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 LAPLEVRVL 10
L+P +VRVL
Sbjct: 491 LSPTQVRVL 499


>sp|SYT_PYRAE|THREONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LAPLEVRVL 10
L+P++VRV+
Sbjct: 493 LSPVQVRVI 501


>sp|SYT_HYPBU|THREONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 LAPLEVRVL 10
LAP++VR++
Sbjct: 497 LAPIQVRLI 505


>sp|SYT_THEPD|THREONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 2 LAPLEVRVL 10
L+P++VRV+
Sbjct: 492 LSPVQVRVI 500




292|Sequence|1456|1465|EVRVLGPRGL

>sp|SPCS_METMP|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanococcus maripaludis (strain DSM 14266

Query: 2 VRVLGPRGL 10
+RV GPRG+
Sbjct: 384 LRVTGPRGI 392


>sp|SPCS_METJA|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 VRVLGPRGL 10
+RV GPRG+
Sbjct: 383 LRVTGPRGV 391


>sp|OTC_PYRAE|ORNITHINE carbamoyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EVRVLGPRGL 10
EVR++GP+ L
Sbjct: 177 EVRLVGPKQL 186


>sp|FAEHP_METTH|BIFUNCTIONAL enzyme Fae/Hps|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 VLGPRGL 10
+LGPRGL
Sbjct: 337 ILGPRGL 343


>sp|RL1_THEVO|LARGE ribosomal subunit protein uL1|Thermoplasma volcanium (strain ATCC

Query: 3 RVLGPRG 9
+VLGPRG
Sbjct: 121 QVLGPRG 127


>sp|RL1_THEAC|LARGE ribosomal subunit protein uL1|Thermoplasma acidophilum (strain ATCC

Query: 3 RVLGPRG 9
+VLGPRG
Sbjct: 121 QVLGPRG 127


>sp|OTC_PYRIL|ORNITHINE carbamoyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 EVRVLGPRGL 10
EVR++GP+ L
Sbjct: 177 EVRLVGPKQL 186


>sp|RL1_METVO|LARGE ribosomal subunit protein uL1|Methanococcus voltae

Query: 4 VLGPRG 9
VLGPRG
Sbjct: 122 VLGPRG 127


>sp|RL1_HALSA|LARGE ribosomal subunit protein uL1|Halobacterium salinarum (strain ATCC

Query: 3 RVLGPRG 9
+VLGPRG
Sbjct: 121 QVLGPRG 127


>sp|RL1_HALS3|LARGE ribosomal subunit protein uL1|Halobacterium salinarum (strain ATCC

Query: 3 RVLGPRG 9
+VLGPRG
Sbjct: 121 QVLGPRG 127


>sp|RL1_CENSY|LARGE ribosomal subunit protein uL1|Cenarchaeum symbiosum (strain A)

Query: 3 RVLGPRG 9
++LGPRG
Sbjct: 120 QILGPRG 126


>sp|RL1_METM7|LARGE ribosomal subunit protein uL1|Methanococcus maripaludis (strain C7

Query: 4 VLGPRG 9
VLGPRG
Sbjct: 122 VLGPRG 127


>sp|RL1_METM6|LARGE ribosomal subunit protein uL1|Methanococcus maripaludis (strain C6

Query: 4 VLGPRG 9
VLGPRG
Sbjct: 122 VLGPRG 127


>sp|RL1_NATPD|LARGE ribosomal subunit protein uL1|Natronomonas pharaonis (strain ATCC

Query: 4 VLGPRG 9
VLGPRG
Sbjct: 121 VLGPRG 126


>sp|RL1_METMP|LARGE ribosomal subunit protein uL1|Methanococcus maripaludis (strain DSM

Query: 4 VLGPRG 9
VLGPRG
Sbjct: 122 VLGPRG 127


>sp|THSA_SULTO|CHAPERONIN subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 LGPRGL 10
LGPRGL
Sbjct: 40 LGPRGL 45


>sp|RL1_METVS|LARGE ribosomal subunit protein uL1|Methanococcus vannielii (strain ATCC

Query: 4 VLGPRG 9
VLGPRG
Sbjct: 122 VLGPRG 127


>sp|THSA_AERPE|THERMOSOME subunit alpha|Aeropyrum pernix (strain ATCC 700893

Query: 5 LGPRGL 10
LGPRGL
Sbjct: 42 LGPRGL 47


>sp|THSA_SULAC|CHAPERONIN subunit alpha|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 LGPRGL 10
LGPRGL
Sbjct: 39 LGPRGL 44


>sp|RNZ_IGNH4|RIBONUCLEASE Z|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 EVRVLGPRGL 10
E+ V+GP+GL
Sbjct: 87 ELLVIGPKGL 96


>sp|RNZ_PYRCJ|RIBONUCLEASE Z|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 EVRVLGPRGL 10
+VRVL PR +
Sbjct: 86 KVRVLAPRSM 95


>sp|THSB_THEAC|THERMOSOME subunit beta|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 LGPRGL 10
LGPRG+
Sbjct: 41 LGPRGM 46


>sp|PCCB_HALMT|PROPIONYL-COA carboxylase, carboxyltransferase subunit|Haloferax mediterranei

Query: 1 EVRVLGPRG 9
E+ V+GP+G
Sbjct: 428 EIAVMGPQG 436


>sp|RL1_METM5|LARGE ribosomal subunit protein uL1|Methanococcus maripaludis (strain C5

Query: 4 VLGPRG 9
VLGPRG
Sbjct: 122 VLGPRG 127


>sp|RL1_METAR|LARGE ribosomal subunit protein uL1|Methanocella arvoryzae (strain DSM

Query: 4 VLGPRG 9
VLGPRG
Sbjct: 123 VLGPRG 128


>sp|OTC_PYRCJ|ORNITHINE carbamoyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 EVRVLGPRGL 10
EVR++GP+ L
Sbjct: 177 EVRLVGPKPL 186


>sp|RL1_HALVD|LARGE ribosomal subunit protein uL1|Haloferax volcanii (strain ATCC 29605

Query: 4 VLGPRG 9
VLGPRG
Sbjct: 121 VLGPRG 126


>sp|RL1_HALMA|LARGE ribosomal subunit protein uL1|Haloarcula marismortui (strain ATCC

Query: 4 VLGPRG 9
VLGPRG
Sbjct: 122 VLGPRG 127


>sp|RL1_METAC|LARGE ribosomal subunit protein uL1|Methanosarcina acetivorans (strain

Query: 4 VLGPRG 9
VLGPRG
Sbjct: 123 VLGPRG 128


>sp|RL1_METMA|LARGE ribosomal subunit protein uL1|Methanosarcina mazei (strain ATCC

Query: 4 VLGPRG 9
VLGPRG
Sbjct: 123 VLGPRG 128


>sp|RL1_METBU|LARGE ribosomal subunit protein uL1|Methanococcoides burtonii (strain DSM

Query: 4 VLGPRG 9
+LGPRG
Sbjct: 123 ILGPRG 128


>sp|RL1_HALLT|LARGE ribosomal subunit protein uL1|Halorubrum lacusprofundi (strain ATCC

Query: 4 VLGPRG 9
VLGPRG
Sbjct: 121 VLGPRG 126


>sp|RL1_PICTO|LARGE ribosomal subunit protein uL1|Picrophilus torridus (strain ATCC

Query: 4 VLGPRG 9
+LGPRG
Sbjct: 117 ILGPRG 122


>sp|AGMT_PYRHO|AGMATINASE horikoshii (strain ATCC 700860

Query: 1 EVRVLGPRGL 10
EVR + PR L
Sbjct: 95 EVRSINPRAL 104


>sp|RL1_META3|LARGE ribosomal subunit protein uL1|Methanococcus aeolicus (strain ATCC

Query: 4 VLGPRG 9
VLGPRG
Sbjct: 122 VLGPRG 127


>sp|SPCS_METKA|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanopyrus kandleri (strain AV19 /

Query: 3 RVLGPRGL 10
RV GPRG+
Sbjct: 378 RVTGPRGV 385


>sp|GCSPA_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 5 LGPRGL 10
LGPRGL
Sbjct: 346 LGPRGL 351


>sp|RL1_METBF|LARGE ribosomal subunit protein uL1|Methanosarcina barkeri (strain Fusaro

Query: 4 VLGPRG 9
VLGPRG
Sbjct: 123 VLGPRG 128


>sp|FAE_METBF|5,6,7,8-TETRAHYDROMETHANOPTERIN hydro-lyase|Methanosarcina barkeri (strain Fusaro /

Query: 4 VLGPRG 9
V+GPRG
Sbjct: 37 VIGPRG 42


>sp|RL1_METKA|LARGE ribosomal subunit protein uL1|Methanopyrus kandleri (strain AV19 /

Query: 4 VLGPRG 9
VLGPRG
Sbjct: 124 VLGPRG 129


>sp|RL1_METTL|LARGE ribosomal subunit protein uL1|Methanothermococcus

Query: 4 VLGPRG 9
VLGPRG
Sbjct: 122 VLGPRG 127


>sp|THS3_HALVD|CHAPERONIN subunit CTT3|Haloferax volcanii (strain ATCC 29605

Query: 5 LGPRGL 10
LGPRG+
Sbjct: 43 LGPRGM 48


>sp|RL1_HALWD|LARGE ribosomal subunit protein uL1|Haloquadratum walsbyi (strain DSM

Query: 4 VLGPRG 9
+LGPRG
Sbjct: 121 ILGPRG 126


>sp|RL6_METTP|LARGE ribosomal subunit protein uL6|Methanothrix thermoacetophila

Query: 2 VRVLGPRG 9
VRV GP+G
Sbjct: 24 VRVKGPKG 31


>sp|RL1_ARCFU|LARGE ribosomal subunit protein uL1|Archaeoglobus fulgidus (strain ATCC

Query: 4 VLGPRG 9
VLGPRG
Sbjct: 125 VLGPRG 130


>sp|RL1_METJA|LARGE ribosomal subunit protein uL1|Methanocaldococcus jannaschii (strain

Query: 4 VLGPRG 9
+LGPRG
Sbjct: 122 ILGPRG 127




293|Sequence|1461|1470|GPRGLVEPVN

>sp|COXX_PYRAR|PROTOHEME IX farnesyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 PRGLVEPVN 10
P GLVEP N
Sbjct: 74 PAGLVEPRN 82


>sp|UVRB_METBU|UVRABC system protein B|Methanococcoides burtonii (strain DSM 6242

Query: 2 PRGLVEPV 9
P GLV+PV
Sbjct: 415 PTGLVDPV 422


>sp|Y2122_ARCFU|UNCHARACTERIZED protein AF_2122|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GLVEPVN 10
GL+EP+N
Sbjct: 27 GLLEPIN 33


>sp|Y1050_PYRFU|UPF0127 protein PF1050|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GPRGLVEPVN 10
GPRG++E ++
Sbjct: 94 GPRGIIEALS 103


>sp|THS_PYRAB|THERMOSOME subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 RGLVEPV 9
RG++EPV
Sbjct: 492 RGVIEPV 498


>sp|THS_PYRHO|THERMOSOME subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 RGLVEPV 9
RG++EPV
Sbjct: 492 RGVIEPV 498


>sp|LIPA_PYRCJ|LIPOYL synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 PRGLVEP 8
PRG V+P
Sbjct: 73 PRGFVDP 79


>sp|MCRG_METVA|METHYL-COENZYME M reductase subunit gamma|Methanococcus vannielii

Query: 3 RGLVEPVN 10
R LVEP+N
Sbjct: 70 RDLVEPLN 77


>sp|FAEHP_METTH|BIFUNCTIONAL enzyme Fae/Hps|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 GPRGLV 6
GPRGLV
Sbjct: 339 GPRGLV 344


>sp|MCRG_METJA|METHYL-COENZYME M reductase I subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 3 RGLVEPVN 10
R LVEP+N
Sbjct: 70 RDLVEPLN 77




294|Sequence|1466|1475|VEPVNVVDNG

>sp|TOP6B_SACI7|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain Y.G.57.14

Query: 4 VNVVDNG 10
VNVVDNG
Sbjct: 72 VNVVDNG 78


>sp|TOP6B_SACI6|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.16.4 /

Query: 4 VNVVDNG 10
VNVVDNG
Sbjct: 72 VNVVDNG 78


>sp|TOP6B_SACI4|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.14.25 /

Query: 4 VNVVDNG 10
VNVVDNG
Sbjct: 72 VNVVDNG 78


>sp|TOP6B_SACI3|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.16.27)

Query: 4 VNVVDNG 10
VNVVDNG
Sbjct: 72 VNVVDNG 78


>sp|TOP6B_SACI2|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 VNVVDNG 10
VNVVDNG
Sbjct: 72 VNVVDNG 78


>sp|TOP6B_SACI1|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain Y.N.15.51

Query: 4 VNVVDNG 10
VNVVDNG
Sbjct: 72 VNVVDNG 78


>sp|TOP6B_SACSH|TYPE 2 DNA topoisomerase 6|Saccharolobus shibatae (strain ATCC 51178

Query: 4 VNVVDNG 10
VNVVDNG
Sbjct: 72 VNVVDNG 78


>sp|TOP6B_SACS2|TYPE 2 DNA topoisomerase 6|Saccharolobus solfataricus (strain ATCC

Query: 4 VNVVDNG 10
VNVVDNG
Sbjct: 72 VNVVDNG 78


>sp|SYL_METTH|LEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 VEPVNVV 7
+EPVNV+
Sbjct: 339 IEPVNVI 345


>sp|Y1302_METJA|UNCHARACTERIZED polyferredoxin-like protein MJ1302|Methanocaldococcus jannaschii

Query: 1 VEPVNVVDN 9
+EPV + DN
Sbjct: 78 IEPVKITDN 86


>sp|Y206_METKA|UPF0280 protein MK0206|Methanopyrus kandleri (strain AV19 /

Query: 2 EPVNVVDNG 10
EP +VDNG
Sbjct: 95 EPTVIVDNG 103


>sp|RTCA_STAMF|RNA 3'-terminal phosphate cyclase|Staphylothermus marinus (strain ATCC

Query: 1 VEPVNVVDNG 10
++P+N+V+ G
Sbjct: 177 MKPINIVERG 186


>sp|G3P_METMP|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 2 EPVNVVDN 9
E VNVVDN
Sbjct: 286 ESVNVVDN 293


>sp|G3P_METM7|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 2 EPVNVVDN 9
E VNVVDN
Sbjct: 286 ESVNVVDN 293


>sp|G3P_METM5|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 2 EPVNVVDN 9
E VNVVDN
Sbjct: 286 ESVNVVDN 293


>sp|G3P_METM6|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus maripaludis (strain C6 /

Query: 2 EPVNVVDN 9
E VNVVDN
Sbjct: 286 ESVNVVDN 293


>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 VEPVNVVD 8
+EP+ ++D
Sbjct: 364 IEPIKIID 371


>sp|RPO2C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanocaldococcus jannaschii

Query: 1 VEPVNVVDNG 10
V P+ VV+NG
Sbjct: 65 VRPLIVVENG 74


>sp|G3P_META3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 EPVNVVDN 9
E VNVVDN
Sbjct: 286 ESVNVVDN 293


>sp|Y1199_ARCFU|UNCHARACTERIZED protein AF_1199|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VEPVNVVDNG 10
+EP+ ++D G
Sbjct: 110 MEPLEIMDEG 119


>sp|SRP54_THEVO|SIGNAL recognition particle 54 kDa|Thermoplasma volcanium (strain ATCC

Query: 2 EPVNVVDNG 10
+PV ++ NG
Sbjct: 163 DPVKIIKNG 171


>sp|MTBC2_METMA|DIMETHYLAMINE corrinoid protein 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VEPVNVVDNG 10
+EP +++NG
Sbjct: 34 MEPAEIIENG 43


>sp|RPO2C_METVS|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanococcus vannielii (strain ATCC

Query: 1 VEPVNVVDNG 10
V P+ VV+NG
Sbjct: 61 VRPLVVVENG 70


>sp|MTBC1_METMA|DIMETHYLAMINE corrinoid protein 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VEPVNVVDNG 10
+EP +++NG
Sbjct: 34 MEPAEIIENG 43




295|Sequence|1471|1480|VVDNGDGTHT

>sp|GLNA_SULAC|GLUTAMINE synthetase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 DNGDGTHT 10
DNG G HT
Sbjct: 263 DNGSGMHT 270


>sp|GLNA_SACS2|GLUTAMINE synthetase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 DNGDGTHT 10
DNG G HT
Sbjct: 260 DNGTGMHT 267


>sp|Y1353_ARCFU|UNCHARACTERIZED protein AF_1353|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VVDNGDGTHT 10
V+ +GDGTH
Sbjct: 186 VISSGDGTHV 195


>sp|SYI_NATPD|ISOLEUCINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 VDNGDGTHT 10
VD GDGT T
Sbjct: 248 VDTGDGTET 256


>sp|PYRB_STAMF|ASPARTATE carbamoyltransferase catalytic subunit|Staphylothermus marinus

Query: 1 VVDNGDGTH 9
V++ GDG H
Sbjct: 125 VINGGDGRH 133


>sp|SURE_AERPE|5'-NUCLEOTIDASE SurE|Aeropyrum pernix (strain ATCC 700893

Query: 1 VVDNGDGTHT 10
+V N DG H+
Sbjct: 5 IVTNDDGVHS 14


>sp|Y760_METJA|UNCHARACTERIZED protein MJ0760|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VVDNGDGTH 9
V D GDGT+
Sbjct: 129 VEDKGDGTY 137


>sp|GLNA_ARCFU|GLUTAMINE synthetase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VDNGDGTHT 10
+DN G HT
Sbjct: 280 LDNASGMHT 288


>sp|PYLC_METAC|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 GDGTH 9
GDGTH
Sbjct: 174 GDGTH 178


>sp|TOP6B_METMA|TYPE 2 DNA topoisomerase 6|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VVDNGDGT 8
+ +NGDGT
Sbjct: 518 IKNNGDGT 525


>sp|SURE2_PYRAE|5'-NUCLEOTIDASE SurE 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VVDNGDGTHT 10
VV N DG H+
Sbjct: 4 VVTNDDGPHS 13


>sp|TKSP_THEKO|SUBTILISIN-LIKE serine protease|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 DNGDGTH 9
DNG GTH
Sbjct: 200 DNGHGTH 206


>sp|TOP6B_METAC|TYPE 2 DNA topoisomerase 6|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VVDNGDGT 8
V NGDGT
Sbjct: 518 VKSNGDGT 525


>sp|Y579_METJA|UNCHARACTERIZED protein MJ0579|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VVDNGDGTH 9
+VD GTH
Sbjct: 164 IVDTAAGTH 172


>sp|RPA_METJA|REPLICATION factor A|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VVDNGDGT 8
VVD+G GT
Sbjct: 564 VVDDGTGT 571


>sp|SYFA_HALSA|PHENYLALANINE--TRNA ligase alpha subunit|Halobacterium salinarum (strain ATCC 700922

Query: 3 DNGDGTHT 10
D+GDG H+
Sbjct: 315 DDGDGYHS 322


>sp|SYFA_HALS3|PHENYLALANINE--TRNA ligase alpha subunit|Halobacterium salinarum (strain ATCC 29341

Query: 3 DNGDGTHT 10
D+GDG H+
Sbjct: 315 DDGDGYHS 322


>sp|SURE1_PYRAE|5'-NUCLEOTIDASE SurE 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VVDNGDGTHT 10
+V N DG H+
Sbjct: 4 LVTNDDGVHS 13


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 3 DNGDGTHT 10
DNG GT+T
Sbjct: 7647 DNGGGTYT 7654


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 1 VVDNGDGT 8
+ DN DGT
Sbjct: 125 IKDNSDGT 132




296|Sequence|1476|1485|DGTHTVTYTP

>sp|SYL_ARCFU|LEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GTHTVTYTP 10
GTH V Y P
Sbjct: 172 GTHPVRYCP 180


>sp|AGMT_PYRHO|AGMATINASE horikoshii (strain ATCC 700860

Query: 2 GTHTVTYTP 10
G H++TY P
Sbjct: 110 GEHSMTYPP 118


>sp|OTC_METJA|ORNITHINE carbamoyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DGTHTVTY 8
DG H+V Y
Sbjct: 277 DGEHSVVY 284


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 GTHTVTYTP 10
G+H V Y P
Sbjct: 182 GSHPVRYCP 190


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GTHTVTYTP 10
G+H V Y P
Sbjct: 185 GSHPVRYCP 193


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 GTHTVTYTP 10
G+H V Y P
Sbjct: 185 GSHPVRYCP 193


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 GTHTVTYTP 10
G+H V Y P
Sbjct: 185 GSHPVRYCP 193


>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GTHTVTYTP 10
G+H V Y P
Sbjct: 175 GSHPVRYCP 183


>sp|Y209_ARCFU|UNCHARACTERIZED protein AF_0209|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GTHTVTYTP 10
G HT YTP
Sbjct: 277 GDHTGYYTP 285


>sp|PYRG_METMJ|CTP synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 DGTHTVTYTP 10
DGTH + P
Sbjct: 403 DGTHVIAILP 412


>sp|CSA2A_SACS2|CRISPR-ASSOCIATED protein Cas7/Csa2 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 THTVTYTP 10
++TVTY P
Sbjct: 47 SYTVTYVP 54


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 GTHTVTYTP 10
G+H V Y P
Sbjct: 180 GSHPVRYCP 188


>sp|AATA_PYRCJ|A-TYPE ATP synthase subunit A|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 THTVTYTP 10
TH +TY P
Sbjct: 147 THYITYPP 154


>sp|DCDB_METHJ|DCTP deaminase, dUMP-forming|Methanospirillum hungatei JF-1 (strain

Query: 2 GTHTVTYTP 10
G H V YTP
Sbjct: 37 GNHFVWYTP 45


>sp|OTC_AERPE|ORNITHINE carbamoyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 2 GTHTVTYTP 10
G HTV TP
Sbjct: 74 GGHTVYMTP 82


>sp|FTTA_METTH|TRANSCRIPTION termination factor FttA|Methanothermobacter thermautotrophicus

Query: 1 DGTHTVTYT 9
DG H + YT
Sbjct: 342 DGQHNMVYT 350


>sp|PURL_THEGJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus gammatolerans (strain DSM 15229

Query: 1 DGTHTVTY 8
DG H VT+
Sbjct: 199 DGVHGVTF 206


>sp|DAPA_METST|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 DGTHTVTYTP 10
+GTH TP
Sbjct: 4 EGTHVAMITP 13


>sp|PORB_METTH|PYRUVATE synthase subunit PorB|Methanothermobacter thermautotrophicus

Query: 1 DGTHTVTYTP 10
DG VTY P
Sbjct: 239 DGDFRVTYRP 248


>sp|GATB_METBF|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina barkeri (strain Fusaro /

Query: 1 DGTHTVTYT 9
DG HTV T
Sbjct: 117 DGEHTVGIT 125


>sp|QUEC_METPE|7-CYANO-7-DEAZAGUANINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 DGTHTVTYTP 10
DGTH TP
Sbjct: 152 DGTHIDLLTP 161


>sp|Y1394_METJA|UNCHARACTERIZED protein MJ1394|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DGTHTVTYTP 10
+G HT+T P
Sbjct: 871 EGNHTITTNP 880


>sp|FTTA_METMA|TRANSCRIPTION termination factor FttA|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DGTHTVTYT 9
DG H V +T
Sbjct: 342 DGLHNVVFT 350




297|Sequence|1481|1490|VTYTPSQEGP

>sp|RS3A_IGNH4|SMALL ribosomal subunit protein eS1|Ignicoccus hospitalis (strain KIN4/I

Query: 1 VTYTPSQEGP 10
V Y PS EGP
Sbjct: 192 VLYMPSPEGP 201


>sp|GLPB_HALSA|PROBABLE anaerobic glycerol-3-phosphate dehydrogenase

Query: 3 YTPSQEGP 10
YTPS +GP
Sbjct: 52 YTPSGDGP 59


>sp|GLPB_HALS3|PROBABLE anaerobic glycerol-3-phosphate dehydrogenase

Query: 3 YTPSQEGP 10
YTPS +GP
Sbjct: 52 YTPSGDGP 59


>sp|PYLS_METBU|PYRROLYSINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 VTYTPSQ 7
V YTPSQ
Sbjct: 149 VKYTPSQ 155


>sp|LHRC_METJA|ATP-DEPENDENT helicase Lhr-Core|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YTPSQE 8
YTPS+E
Sbjct: 257 YTPSEE 262


>sp|RPO3_METJA|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanocaldococcus jannaschii (strain

Query: 1 VTYTPSQEGP 10
+T+T +EGP
Sbjct: 80 ITFTLEKEGP 89


>sp|TRUA_METPE|TRNA pseudouridine synthase A|Methanosphaerula palustris (strain ATCC

Query: 1 VTYTPSQEGP 10
VT+TP++ P
Sbjct: 227 VTFTPTEPDP 236


>sp|PUS10_AERPE|TRNA pseudouridine synthase Pus10|Aeropyrum pernix (strain ATCC 700893

Query: 3 YTPSQEGP 10
Y P+ EGP
Sbjct: 216 YWPTPEGP 223


>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VTYTPSQEG 9
V Y P Q+G
Sbjct: 895 VIYVPKQDG 903


>sp|LEUC2_METKA|3-ISOPROPYLMALATE dehydratase large subunit 2|Methanopyrus kandleri (strain AV19 /

Query: 2 TYTPSQEGP 10
Y P +EGP
Sbjct: 221 AYVPPKEGP 229


>sp|QUEC_PYRAE|7-CYANO-7-DEAZAGUANINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 YTPSQEG 9
+TPS+EG
Sbjct: 184 WTPSREG 190


>sp|DNLI_METB6|DNA ligase|Methanoregula boonei (strain DSM 21154

Query: 3 YTPSQEG 9
YTP Q G
Sbjct: 400 YTPGQRG 406


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 YTPSQE 8
YTPS+E
Sbjct: 584 YTPSEE 589


>sp|KAE1_METTP|TRNA N6-adenosine threonylcarbamoyltransferase|Methanothrix

Query: 2 TYTPSQEG 9
TYTP++ G
Sbjct: 30 TYTPARGG 37


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 1 VTYTPSQE 8
+ YTPS+E
Sbjct: 198 LQYTPSEE 205


>sp|SPEE_SULAC|POLYAMINE aminopropyltransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VTYTPSQEG 9
+TY PS +G
Sbjct: 222 ITYVPSFDG 230


>sp|GATE_PYRNV|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum neutrophilum (strain DSM

Query: 1 VTYTPSQ 7
+TYTP Q
Sbjct: 190 MTYTPQQ 196




298|Sequence|1486|1495|SQEGPYMVSV

>sp|MDH_METTH|MALATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 QEGPYMV 8
Q GPYMV
Sbjct: 176 QHGPYMV 182


>sp|MDH_METTM|MALATE dehydrogenase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 2 QEGPYMV 8
Q GPYMV
Sbjct: 176 QHGPYMV 182


>sp|DHQS_METBU|3-DEHYDROQUINATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 SQEGPYMVS 9
S+E PY+ S
Sbjct: 250 SEESPYVAS 258




299|Sequence|1491|1500|YMVSVKYADE

>sp|PDXT_METS3|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanobrevibacter smithii

Query: 3 VSVKYADE 10
+SV+YADE
Sbjct: 34 ISVRYADE 41


>sp|ILVD_METHJ|DIHYDROXY-ACID dehydratase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 SVKYADE 10
SVKY DE
Sbjct: 348 SVKYVDE 354


>sp|Y1546_ARCFU|UNCHARACTERIZED MscS family protein AF_1546|Archaeoglobus fulgidus (strain ATCC

Query: 1 YMVSVKYADE 10
Y+V ++Y+D+
Sbjct: 177 YVVGIRYSDD 186


>sp|FAU1_PYRAE|PROBABLE ribonuclease FAU-1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 SVKYADE 10
S KYADE
Sbjct: 195 SAKYADE 201




300|Sequence|1496|1505|KYADEEIPRS

>sp|PHOU1_METTH|PHOSPHATE-SPECIFIC transport system accessory protein|Methanothermobacter

Query: 1 KYADEEIPR 9
K DEEIPR
Sbjct: 111 KLKDEEIPR 119


>sp|SRP19_STAMF|SIGNAL recognition particle 19 kDa|Staphylothermus marinus (strain ATCC

Query: 1 KYADEEIPRS 10
+Y D IPRS
Sbjct: 15 QYIDSSIPRS 24


>sp|OGG1_SACI1|8-OXOGUANINE DNA glycosylase/AP lyase|Saccharolobus islandicus (strain

Query: 2 YADEEIPRS 10
YA+EE+ RS
Sbjct: 64 YANEEVIRS 72


>sp|OGG1_SACI7|8-OXOGUANINE DNA glycosylase/AP lyase|Saccharolobus islandicus (strain

Query: 2 YADEEIPRS 10
YA+EE+ RS
Sbjct: 64 YANEEVIRS 72


>sp|OGG1_SACI6|8-OXOGUANINE DNA glycosylase/AP lyase|Saccharolobus islandicus (strain M.16.4

Query: 2 YADEEIPRS 10
YA+EE+ RS
Sbjct: 64 YANEEVIRS 72


>sp|OGG1_SACI4|8-OXOGUANINE DNA glycosylase/AP lyase|Saccharolobus islandicus (strain M.14.25

Query: 2 YADEEIPRS 10
YA+EE+ RS
Sbjct: 64 YANEEVIRS 72


>sp|OGG1_SACI3|8-OXOGUANINE DNA glycosylase/AP lyase|Saccharolobus islandicus (strain

Query: 2 YADEEIPRS 10
YA+EE+ RS
Sbjct: 64 YANEEVIRS 72


>sp|OGG1_SACI2|8-OXOGUANINE DNA glycosylase/AP lyase|Saccharolobus islandicus (strain

Query: 2 YADEEIPRS 10
YA+EE+ RS
Sbjct: 64 YANEEVIRS 72


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KYADEEIPR 9
+ DEEIPR
Sbjct: 1292 RILDEEIPR 1300


>sp|GYRB_ARCFU|DNA gyrase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YADEEIPRS 10
Y+DEE+ R+
Sbjct: 547 YSDEELKRT 555


>sp|SYA_SULTO|ALANINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KYADEEIPRS 10
KY D+E+ R+
Sbjct: 315 KYVDQELTRA 324


>sp|TOP6A_HALSA|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 700922

Query: 1 KYADEEIPR 9
++AD +IPR
Sbjct: 26 QFADGDIPR 34


>sp|TOP6A_HALS3|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 29341

Query: 1 KYADEEIPR 9
++AD +IPR
Sbjct: 26 QFADGDIPR 34


>sp|SYP_PYRNV|PROLINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 YADEEIP 8
Y+DEE+P
Sbjct: 301 YSDEEMP 307


>sp|RTCB_METJA|TRNA-SPLICING ligase RtcB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KYADEEIPR 9
+YADE+I R
Sbjct: 146 RYADEKIIR 154


>sp|CS2H_SACS2|CARBON disulfide hydrolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KYADEEIPR 9
+Y DEEI R
Sbjct: 4 EYVDEEIKR 12


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 KYADEEIPR 9
KYA E+ PR
Sbjct: 794 KYAGEKAPR 802


>sp|FAU1_PYRAE|PROBABLE ribonuclease FAU-1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 KYADEE 6
KYADEE
Sbjct: 197 KYADEE 202


>sp|SRP19_PYRIL|SIGNAL recognition particle 19 kDa|Pyrobaculum islandicum (strain DSM

Query: 2 YADEEIPRS 10
Y D +PRS
Sbjct: 13 YLDSSVPRS 21


>sp|PYRDB_METTH|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanothermobacter

Query: 1 KYADEEIP 8
K DEE+P
Sbjct: 87 KLVDEEVP 94


>sp|PDXT_ARCFU|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Archaeoglobus fulgidus (strain

Query: 1 KYADEEIPRS 10
KY DE++ ++
Sbjct: 92 KYGDEQVEKT 101


>sp|GATE_PYRHO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus horikoshii (strain ATCC

Query: 2 YADEEIPRS 10
Y DEE PR
Sbjct: 87 YMDEEPPRG 95


>sp|SYA_SULAC|ALANINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KYADEEIPRS 10
KY +EE+ R+
Sbjct: 315 KYVNEELTRA 324


>sp|GATE_PYRFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YADEEIPRS 10
Y DEE PR
Sbjct: 83 YMDEEPPRG 91


>sp|GATE_PYRAB|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus abyssi (strain GE5 /

Query: 2 YADEEIPRS 10
Y DEE PR
Sbjct: 87 YMDEEPPRG 95


>sp|GATE_THEKO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermococcus kodakarensis (strain ATCC

Query: 2 YADEEIPRS 10
Y DEE PR
Sbjct: 84 YMDEEPPRG 92


>sp|CISY_SACS2|CITRATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 YADEEIPRS 10
Y D E+P S
Sbjct: 180 YTDHEVPAS 188


>sp|CDVA_SULAC|CELL division protein A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 YADEEIPRS 10
Y+ +EIP+S
Sbjct: 95 YSRQEIPKS 103


>sp|GATE_THEGJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermococcus gammatolerans (strain DSM

Query: 2 YADEEIPRS 10
Y DEE PR
Sbjct: 84 YMDEEPPRG 92


>sp|Y120_METTH|PUTATIVE NADH dehydrogenase/NAD(P)H nitroreductase|Methanothermobacter

Query: 1 KYADEEIP 8
KY D E+P
Sbjct: 37 KYQDREVP 44


>sp|CISY_THEAC|CITRATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 YADEEIPRS 10
Y D E+P S
Sbjct: 185 YTDHEVPAS 193


>sp|SRP19_PYRAE|SIGNAL recognition particle 19 kDa|Pyrobaculum aerophilum (strain ATCC

Query: 2 YADEEIPRS 10
Y D +PRS
Sbjct: 13 YIDASVPRS 21




301|Sequence|1501|1510|EIPRSPFKVK

>sp|MTMB2_METBA|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri

Query: 2 IPRSPFKV 9
IP+SP++V
Sbjct: 170 IPKSPYEV 177


>sp|MTMB1_METBA|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri

Query: 2 IPRSPFKV 9
IP+SP++V
Sbjct: 170 IPKSPYEV 177


>sp|CHED2_METMA|PROBABLE chemoreceptor glutamine deamidase CheD|Methanosarcina mazei

Query: 2 IPRSPFKVK 10
I RSP K+K
Sbjct: 16 IARSPMKIK 24


>sp|MTMB3_METBF|MONOMETHYLAMINE methyltransferase MtmB3|Methanosarcina barkeri (strain Fusaro /

Query: 2 IPRSPFKV 9
+P+SP++V
Sbjct: 170 VPKSPYEV 177


>sp|MTMB2_METBF|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri (strain Fusaro /

Query: 2 IPRSPFKV 9
+P+SP++V
Sbjct: 170 VPKSPYEV 177


>sp|MTMB2_METAC|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina acetivorans (strain ATCC

Query: 2 IPRSPFKV 9
+P+SP++V
Sbjct: 170 VPKSPYEV 177


>sp|MTMB1_METBF|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri (strain Fusaro /

Query: 2 IPRSPFKV 9
+P+SP++V
Sbjct: 170 VPKSPYEV 177


>sp|MTMB1_METAC|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina acetivorans (strain ATCC

Query: 2 IPRSPFKV 9
+P+SP++V
Sbjct: 170 VPKSPYEV 177


>sp|PYRC_THEVO|DIHYDROOROTASE volcanium (strain ATCC 51530

Query: 1 EIPRSPF 7
++PRSPF
Sbjct: 367 KLPRSPF 373


>sp|SODF_SULAC|SUPEROXIDE dismutase [Fe]|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EIPRSPFKV 9
E P+ P+KV
Sbjct: 11 EFPQLPYKV 19


>sp|METX_METTH|PROBABLE acyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 EIPRSPFKVK 10
EIP S FK++
Sbjct: 4 EIPASYFKIE 13


>sp|RTCA_METS5|RNA 3'-terminal phosphate cyclase|Metallosphaera sedula (strain ATCC

Query: 4 RSPFKVK 10
RSPFK++
Sbjct: 324 RSPFKLR 330


>sp|NADK_THEGJ|NAD kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 PRSPFKVK 10
PR PF++K
Sbjct: 268 PRYPFRLK 275




302|Sequence|1506|1515|PFKVKVLPTY

>sp|IF2P_METKA|PROBABLE translation initiation factor IF-2|Methanopyrus kandleri (strain

Query: 1 PFKVKVLPTY 10
P K+KVLP Y
Sbjct: 471 PGKIKVLPGY 480


>sp|IF2P_METS5|PROBABLE translation initiation factor IF-2|Metallosphaera sedula (strain

Query: 1 PFKVKVLPTY 10
P K+K+LP Y
Sbjct: 466 PGKIKILPGY 475


>sp|IF2P_SACS2|PROBABLE translation initiation factor IF-2|Saccharolobus solfataricus

Query: 1 PFKVKVLPTY 10
P K+K+LP Y
Sbjct: 468 PGKIKILPGY 477


>sp|UPP_METVS|URACIL phosphoribosyltransferase|Methanococcus vannielii (strain ATCC

Query: 1 PFKVKVLP 8
PFKV +LP
Sbjct: 219 PFKVSLLP 226


>sp|IF2P_SULAC|PROBABLE translation initiation factor IF-2|Sulfolobus acidocaldarius

Query: 1 PFKVKVLPTY 10
P K+K++P Y
Sbjct: 469 PGKIKIIPGY 478


>sp|PRIS_PYRNV|DNA primase small subunit PriS|Pyrobaculum neutrophilum (strain DSM

Query: 4 VKVLPTY 10
VKVLP Y
Sbjct: 291 VKVLPAY 297


>sp|PRIS_PYRIL|DNA primase small subunit PriS|Pyrobaculum islandicum (strain DSM 4184

Query: 4 VKVLPTY 10
VKVLP Y
Sbjct: 291 VKVLPAY 297


>sp|PYCB_METTH|PYRUVATE carboxylase subunit B|Methanothermobacter thermautotrophicus

Query: 2 FKVKVLPT 9
F+VKV+PT
Sbjct: 476 FEVKVVPT 483


>sp|UPP_METM6|URACIL phosphoribosyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 PFKVKVLP 8
PFKV +LP
Sbjct: 218 PFKVSMLP 225


>sp|UPP_METMP|URACIL phosphoribosyltransferase|Methanococcus maripaludis (strain DSM

Query: 1 PFKVKVLP 8
PFKV +LP
Sbjct: 218 PFKVSMLP 225


>sp|PRIS_PYRAE|DNA primase small subunit PriS|Pyrobaculum aerophilum (strain ATCC

Query: 4 VKVLPTY 10
VKVLP Y
Sbjct: 291 VKVLPAY 297


>sp|EF1B_METM7|ELONGATION factor 1-beta|Methanococcus maripaludis (strain C7 /

Query: 3 KVKVLPT 9
KVKV+PT
Sbjct: 7 KVKVMPT 13


>sp|EF1B_METM5|ELONGATION factor 1-beta|Methanococcus maripaludis (strain C5 /

Query: 3 KVKVLPT 9
KVKV+PT
Sbjct: 7 KVKVMPT 13


>sp|EF1B_METMP|ELONGATION factor 1-beta|Methanococcus maripaludis (strain DSM 14266

Query: 3 KVKVLPT 9
KVKV+PT
Sbjct: 7 KVKVMPT 13


>sp|EF1B_METM6|ELONGATION factor 1-beta|Methanococcus maripaludis (strain C6 /

Query: 3 KVKVLPT 9
KVKV+PT
Sbjct: 7 KVKVMPT 13


>sp|UPP_METM5|URACIL phosphoribosyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 PFKVKVLP 8
PFKV +LP
Sbjct: 218 PFKVPMLP 225


>sp|CAPPA_PYRCJ|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 VKVLPTY 10
+KVLPTY
Sbjct: 384 LKVLPTY 390


>sp|COBD_PYRAB|PROBABLE cobalamin biosynthesis protein CobD|Pyrococcus abyssi (strain GE5 /

Query: 1 PFKVKVLPTY 10
PF VKVL Y
Sbjct: 209 PFGVKVLKYY 218


>sp|UDGA_SACS2|TYPE-4 uracil-DNA glycosylase|Saccharolobus solfataricus (strain ATCC

Query: 2 FKVKVLPTY 10
+K+ V PTY
Sbjct: 155 YKILVFPTY 163


>sp|SYFA_THEON|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus onnurineus (strain NA1)

Query: 3 KVKVLPTY 10
KVK LP Y
Sbjct: 413 KVKFLPDY 420


>sp|MFNA_THEKO|L-ASPARTATE decarboxylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PFKVKVLPTY 10
PF VKV+ Y
Sbjct: 41 PFAVKVVMKY 50


>sp|SYFA_THEKO|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 KVKVLPTY 10
KVK LP Y
Sbjct: 414 KVKFLPDY 421


>sp|SYFA_THESM|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus sibiricus (strain DSM 12597

Query: 3 KVKVLPTY 10
KVK LP Y
Sbjct: 416 KVKFLPDY 423


>sp|UPP_METM7|URACIL phosphoribosyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 PFKVKVLP 8
P+KV +LP
Sbjct: 218 PYKVSMLP 225


>sp|DPOL1_SACS2|DNA polymerase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PFKVKVLP 8
PF V VLP
Sbjct: 804 PFGVNVLP 811




303|Sequence|1511|1520|VLPTYDASKV

>sp|RL23_THEKO|LARGE ribosomal subunit protein uL23|Thermococcus kodakarensis (strain

Query: 3 PTYDASKV 10
P YDAS++
Sbjct: 72 PEYDASEI 79


>sp|AGO_PYRFU|PROTEIN argonaute|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VLPTYDASKV 10
V+PTY+A ++
Sbjct: 268 VVPTYNAEQL 277


>sp|Y1355_METJA|UNCHARACTERIZED protein MJ1355|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VLPTYDASK 9
++PTYD K
Sbjct: 291 IIPTYDEIK 299


>sp|MPTA_METTH|GTP cyclohydrolase MptA|Methanothermobacter thermautotrophicus

Query: 1 VLPTYDA 7
+LPT+DA
Sbjct: 44 LLPTFDA 50


>sp|CDC62_THEAC|ORC1-TYPE DNA replication protein 2|Thermoplasma acidophilum (strain ATCC

Query: 1 VLPTYDASKV 10
V P Y+AS++
Sbjct: 201 VFPPYNASEI 210


>sp|CDC6_PYRAB|ORC1-TYPE DNA replication protein|Pyrococcus abyssi (strain GE5 /

Query: 1 VLPTYDASKV 10
V P YDA+++
Sbjct: 216 VFPPYDANQL 225


>sp|CDC6_PYRHO|ORC1-TYPE DNA replication protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VLPTYDASKV 10
V P YDA+++
Sbjct: 216 VFPPYDANQL 225


>sp|CDC6_PYRFU|ORC1-TYPE DNA replication protein|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VLPTYDASKV 10
V P YDA+++
Sbjct: 217 VFPPYDANQL 226


>sp|CDC6_THEON|ORC1-TYPE DNA replication protein|Thermococcus onnurineus (strain NA1)

Query: 1 VLPTYDASKV 10
V P YDA+++
Sbjct: 213 VFPPYDANQL 222


>sp|CDC6_THEKO|ORC1-TYPE DNA replication protein|Thermococcus kodakarensis (strain ATCC

Query: 1 VLPTYDASKV 10
V P YDA+++
Sbjct: 213 VFPPYDANQL 222


>sp|CDC6D_HALMA|ORC1-TYPE DNA replication protein 4|Haloarcula marismortui (strain ATCC 43049

Query: 1 VLPTYDASKV 10
V P YDA+++
Sbjct: 321 VFPPYDANQL 330


>sp|CDC67_HALSA|ORC1-TYPE DNA replication protein 7|Halobacterium salinarum (strain ATCC

Query: 1 VLPTYDASKV 10
V P YDA+++
Sbjct: 314 VFPPYDANQL 323




304|Sequence|1516|1525|DASKVTASGP

>sp|PIMT_METM7|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 DASKVTASGP 10
D VTASGP
Sbjct: 147 DRIYVTASGP 156


>sp|PIMT_METM5|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 DASKVTASGP 10
D VTASGP
Sbjct: 147 DRIYVTASGP 156


>sp|PIMT_METM6|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 DASKVTASGP 10
D VTASGP
Sbjct: 147 DRIYVTASGP 156


>sp|PIMT_METMP|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DASKVTASGP 10
D VTASGP
Sbjct: 147 DRIYVTASGP 156


>sp|RL6_HYPBU|LARGE ribosomal subunit protein uL6|Hyperthermus butylicus (strain DSM

Query: 1 DASKVTASGP 10
D KVT GP
Sbjct: 22 DGLKVTVKGP 31




305|Sequence|1521|1530|TASGPGLSSY

>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 2 ASGPGLSSY 10
A+GP LS+Y
Sbjct: 2145 AAGPDLSAY 2153


>sp|Y363_METJA|MCM-LIKE protein MJ0363|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TASGPGL 7
T+SGPGL
Sbjct: 424 TSSGPGL 430


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC 43049

Query: 2 ASGPGLSSY 10
A+GP LS+Y
Sbjct: 1251 AAGPDLSAY 1259


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 2 ASGPGLSSY 10
A+GP LS+Y
Sbjct: 1054 AAGPDLSAY 1062


>sp|APGM_PICTO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Picrophilus torridus (strain ATCC 700027

Query: 4 GPGLSS 9
GPGLSS
Sbjct: 150 GPGLSS 155


>sp|FUMC_SACS2|FUMARATE hydratase class II|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TASGPGLSSY 10
TA+G GL+S+
Sbjct: 202 TATGTGLNSH 211


>sp|VORB_METTM|KETOISOVALERATE oxidoreductase subunit VorB|Methanothermobacter marburgensis

Query: 2 ASGPGLS 8
+SGPG+S
Sbjct: 77 SSGPGMS 83


>sp|VORB_METTH|KETOISOVALERATE oxidoreductase subunit VorB|Methanothermobacter

Query: 2 ASGPGLS 8
+SGPG+S
Sbjct: 77 SSGPGIS 83


>sp|CBSA_SULAC|CYTOCHROME b558/566 subunit A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 ASGPGL 7
ASGPGL
Sbjct: 122 ASGPGL 127


>sp|CBSA_SACS2|CYTOCHROME b558/566 subunit A|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 ASGPGL 7
ASGPGL
Sbjct: 130 ASGPGL 135




306|Sequence|1526|1535|GLSSYGVPAS

>sp|RPIA_ARCFU|RIBOSE-5-PHOSPHATE isomerase A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GLSSYGVPAS 10
GL YG+P+S
Sbjct: 46 GLEIYGIPSS 55


>sp|RPIA_META3|RIBOSE-5-PHOSPHATE isomerase A|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GLSSYGVPAS 10
GL+ +GVP S
Sbjct: 54 GLNVFGVPTS 63


>sp|R15PI_THEKO|RIBOSE 1,5-bisphosphate isomerase|Thermococcus kodakarensis (strain ATCC

Query: 2 LSSYGVP 8
L+SYG+P
Sbjct: 172 LASYGIP 178


>sp|R15PI_PYRHO|RIBOSE 1,5-bisphosphate isomerase|Pyrococcus horikoshii (strain ATCC

Query: 2 LSSYGVP 8
L+SYG+P
Sbjct: 174 LASYGIP 180


>sp|R15PI_PYRFU|RIBOSE 1,5-bisphosphate isomerase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LSSYGVP 8
L+SYG+P
Sbjct: 174 LASYGIP 180


>sp|R15PI_PYRAB|RIBOSE 1,5-bisphosphate isomerase|Pyrococcus abyssi (strain GE5 /

Query: 2 LSSYGVP 8
L+SYG+P
Sbjct: 174 LASYGIP 180


>sp|CPKA_PYRFU|CARBAMATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GLSSYGVPA 9
G ++YG+PA
Sbjct: 67 GQATYGIPA 75


>sp|RNP4_METBU|RIBONUCLEASE P protein component 4|Methanococcoides burtonii (strain DSM 6242

Query: 1 GLSSYGVPAS 10
G SSY VP S
Sbjct: 69 GCSSYLVPGS 78


>sp|SURE_METBU|5'-NUCLEOTIDASE SurE|Methanococcoides burtonii (strain DSM 6242

Query: 3 SSYGVPA 9
+SYGVPA
Sbjct: 119 ASYGVPA 125


>sp|SURE_METMA|5'-NUCLEOTIDASE SurE|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 SSYGVPA 9
+SYGVPA
Sbjct: 123 ASYGVPA 129


>sp|SURE_METTP|5'-NUCLEOTIDASE SurE|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 SSYGVPA 9
+SYGVPA
Sbjct: 119 ASYGVPA 125


>sp|SURE_METBF|5'-NUCLEOTIDASE SurE|Methanosarcina barkeri (strain Fusaro /

Query: 3 SSYGVPA 9
+SYGVPA
Sbjct: 123 ASYGVPA 129


>sp|PROB_NATPD|GLUTAMATE 5-kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LSSYGVPA 9
+S YG+PA
Sbjct: 244 VSEYGIPA 251


>sp|GFCR_METVS|TRANSCRIPTIONAL regulator GfcR|Methanococcus vannielii (strain ATCC 35089

Query: 1 GLSSYGVP 8
G+SS GVP
Sbjct: 94 GISSGGVP 101


>sp|GFCR_METMP|TRANSCRIPTIONAL regulator GfcR|Methanococcus maripaludis (strain DSM 14266

Query: 1 GLSSYGVP 8
G+SS GVP
Sbjct: 94 GISSGGVP 101


>sp|GFCR_METM7|TRANSCRIPTIONAL regulator GfcR|Methanococcus maripaludis (strain C7 /

Query: 1 GLSSYGVP 8
G+SS GVP
Sbjct: 94 GISSGGVP 101


>sp|GFCR_METM6|TRANSCRIPTIONAL regulator GfcR|Methanococcus maripaludis (strain C6 /

Query: 1 GLSSYGVP 8
G+SS GVP
Sbjct: 94 GISSGGVP 101


>sp|GFCR_METM5|TRANSCRIPTIONAL regulator GfcR|Methanococcus maripaludis (strain C5 /

Query: 1 GLSSYGVP 8
G+SS GVP
Sbjct: 94 GISSGGVP 101


>sp|ACDA2_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 GLSSYGVPA 9
G + YG+PA
Sbjct: 641 GCNMYGIPA 649


>sp|SURE_METAC|5'-NUCLEOTIDASE SurE|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 SSYGVPA 9
+SYG+PA
Sbjct: 123 ASYGIPA 129


>sp|SECF_METTH|PROTEIN-EXPORT membrane protein SecF|Methanothermobacter thermautotrophicus

Query: 1 GLSSYGVPAS 10
G+S +G+P S
Sbjct: 172 GMSLFGIPLS 181


>sp|RPIA_METB6|RIBOSE-5-PHOSPHATE isomerase A|Methanoregula boonei (strain DSM 21154

Query: 1 GLSSYGVPAS 10
GLS GVP S
Sbjct: 51 GLSVVGVPTS 60


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 1 GLSSYGVPA 9
G + YG+PA
Sbjct: 644 GCNIYGIPA 652


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 GLSSYGVPA 9
G + YG+PA
Sbjct: 644 GCNIYGIPA 652


>sp|GLYA_CALMQ|SERINE hydroxymethyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 2 LSSYGVP 8
LS YG+P
Sbjct: 299 LSKYGIP 305


>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 GLSSYGVPA 9
G + YG+PA
Sbjct: 643 GCNIYGIPA 651


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 GLSSYGVPA 9
G + YG+PA
Sbjct: 643 GCNIYGIPA 651




307|Sequence|1531|1540|GVPASLPVDF

>sp|CP119_SULTO|CYTOCHROME P450 119|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 PASLPVDF 10
P++LPVDF
Sbjct: 89 PSNLPVDF 96


>sp|AROC_METBU|CHORISMATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GVPASLPVD 9
GVPA LP+D
Sbjct: 29 GVPAGLPLD 37


>sp|PGK_SULAC|PHOSPHOGLYCERATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GVPASLPVDF 10
G P +PVDF
Sbjct: 275 GAPIEIPVDF 284


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 GVPASLPVDF 10
GVPA P D+
Sbjct: 341 GVPAHAPYDY 350


>sp|PGK_METS5|PHOSPHOGLYCERATE kinase|Metallosphaera sedula (strain ATCC 51363

Query: 1 GVPASLPVDF 10
G P +PVDF
Sbjct: 269 GAPVEIPVDF 278


>sp|PGK_SULTO|PHOSPHOGLYCERATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GVPASLPVDF 10
G P +PVDF
Sbjct: 275 GAPIEIPVDF 284


>sp|AROC_SULTO|CHORISMATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GVPASLPV 8
GVPA LP+
Sbjct: 29 GVPAGLPI 36


>sp|Y1070_METJA|UNCHARACTERIZED protein MJ1070|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PASLPVDF 10
PA P+DF
Sbjct: 132 PAKTPIDF 139


>sp|SYG_AERPE|GLYCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GVPASLPVDF 10
GVPA++ +D+
Sbjct: 525 GVPAAVTIDY 534


>sp|CFBD_METJA|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanocaldococcus

Query: 1 GVPASLPVD 9
GVP +LP++
Sbjct: 286 GVPHALPIE 294


>sp|SYL_METTH|LEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 VPASLPVDF 10
VPA P DF
Sbjct: 306 VPAHAPADF 314


>sp|CFBD_METTH|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanothermobacter

Query: 1 GVPASLPVD 9
GVP +LPV+
Sbjct: 291 GVPHALPVE 299


>sp|AROC_SACI7|CHORISMATE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 GVPASLPV 8
GVPA LP+
Sbjct: 29 GVPAGLPL 36


>sp|AROC_SACI6|CHORISMATE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 GVPASLPV 8
GVPA LP+
Sbjct: 29 GVPAGLPL 36


>sp|AROC_SACI4|CHORISMATE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GVPASLPV 8
GVPA LP+
Sbjct: 29 GVPAGLPL 36


>sp|AROC_SACI2|CHORISMATE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 GVPASLPV 8
GVPA LP+
Sbjct: 29 GVPAGLPL 36


>sp|AROC_SACI1|CHORISMATE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 GVPASLPV 8
GVPA LP+
Sbjct: 29 GVPAGLPL 36


>sp|AROC_SACI3|CHORISMATE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 GVPASLPV 8
GVPA LP+
Sbjct: 29 GVPAGLPL 36


>sp|AROC_SACS2|CHORISMATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GVPASLPV 8
GVPA LP+
Sbjct: 29 GVPAGLPL 36


>sp|PGK_SACS2|PHOSPHOGLYCERATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GVPASLPVDF 10
G P +PVD+
Sbjct: 271 GAPIEIPVDY 280


>sp|GATB_METBF|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina barkeri (strain Fusaro

Query: 1 GVPASLPV 8
G+P +LPV
Sbjct: 49 GLPGTLPV 56


>sp|GATB_METAC|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina acetivorans (strain

Query: 1 GVPASLPV 8
G+P +LPV
Sbjct: 49 GLPGTLPV 56


>sp|TMCA_THEPD|TRNA(MET) cytidine acetyltransferase TmcA|Thermofilum pendens (strain DSM

Query: 1 GVPASLPVDF 10
GVP L VD+
Sbjct: 79 GVPRELSVDY 88


>sp|GATB_METMA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina mazei (strain ATCC

Query: 1 GVPASLPV 8
G+P +LPV
Sbjct: 49 GLPGALPV 56


>sp|GATB_METBU|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcoides burtonii (strain DSM

Query: 1 GVPASLPV 8
G+P +LPV
Sbjct: 49 GLPGALPV 56


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 VPASLPVDF 10
VPA P DF
Sbjct: 347 VPAHAPKDF 355


>sp|GATB_NATPD|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Natronomonas pharaonis (strain ATCC

Query: 1 GVPASLPV 8
G+P +LPV
Sbjct: 53 GLPGALPV 60


>sp|GATB_HALMA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Haloarcula marismortui (strain ATCC

Query: 1 GVPASLPV 8
G+P +LPV
Sbjct: 52 GLPGALPV 59


>sp|GATB_HALWD|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Haloquadratum walsbyi (strain DSM

Query: 1 GVPASLPV 8
G+P +LPV
Sbjct: 52 GLPGALPV 59


>sp|SYL_METTP|LEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 VPASLPVDF 10
VPA P+D+
Sbjct: 314 VPAHAPLDY 322


>sp|AROC_PYRAE|CHORISMATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GVPASLPV 8
GVPA LP+
Sbjct: 27 GVPAGLPL 34


>sp|AROC_PYRAR|CHORISMATE synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GVPASLPV 8
GVPA LP+
Sbjct: 27 GVPAGLPL 34


>sp|AROC_METM7|CHORISMATE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 GVPASLPV 8
G PA+LP+
Sbjct: 27 GCPANLPI 34


>sp|AROC_METMP|CHORISMATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GVPASLPV 8
G PA+LP+
Sbjct: 27 GCPANLPI 34


>sp|SELD_METMP|SELENIDE, water dikinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GVPASLPV 8
G+P LPV
Sbjct: 95 GIPPELPV 102


>sp|GATB_AERPE|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Aeropyrum pernix (strain ATCC 700893

Query: 1 GVPASLPV 8
G+P +LPV
Sbjct: 48 GLPGALPV 55


>sp|ADEC_CENSY|ADENINE deaminase|Cenarchaeum symbiosum (strain A)

Query: 2 VPASLPVD 9
VP LPVD
Sbjct: 142 VPGGLPVD 149


>sp|AROC_PYRCJ|CHORISMATE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GVPASLPV 8
GVPA LP+
Sbjct: 27 GVPAGLPL 34


>sp|UBIX_AERPE|FLAVIN prenyltransferase UbiX|Aeropyrum pernix (strain ATCC 700893

Query: 1 GVPASLP 7
G+P+SLP
Sbjct: 104 GIPSSLP 110




308|Sequence|1536|1545|LPVDFAIDAR

>sp|PGK_PYRAB|PHOSPHOGLYCERATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 PVDFAIDAR 10
PVDFAID +
Sbjct: 272 PVDFAIDYK 280


>sp|PGK_PYRWO|PHOSPHOGLYCERATE kinase|Pyrococcus woesei

Query: 2 PVDFAID 8
PVDFAID
Sbjct: 272 PVDFAID 278


>sp|PGK_PYRFU|PHOSPHOGLYCERATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PVDFAID 8
PVDFAID
Sbjct: 272 PVDFAID 278


>sp|PGK_THEKO|PHOSPHOGLYCERATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 PVDFAIDAR 10
PVDFAID +
Sbjct: 272 PVDFAIDYK 280


>sp|PGK_PYRHO|PHOSPHOGLYCERATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PVDFAIDAR 10
PVDFA+D +
Sbjct: 272 PVDFAVDYK 280


>sp|PGK_THEON|PHOSPHOGLYCERATE kinase|Thermococcus onnurineus (strain NA1)

Query: 2 PVDFAIDAR 10
PVDFA+D +
Sbjct: 272 PVDFAVDYK 280


>sp|RPO1C_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermoplasma acidophilum (strain

Query: 1 LPVDFAID 8
LP D+A+D
Sbjct: 20 LPADYAVD 27


>sp|HYD2D_PYRFU|SULFHYDROGENASE 2 subunit delta|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LPVDFAI 7
+PVDFAI
Sbjct: 123 VPVDFAI 129


>sp|GFCR_METTH|TRANSCRIPTIONAL regulator GfcR|Methanothermobacter thermautotrophicus (strain

Query: 2 PVDFAID 8
PVDFAI+
Sbjct: 50 PVDFAIN 56


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 LPVDFAIDA 9
+P+ FA+DA
Sbjct: 913 VPIRFALDA 921


>sp|PGK_THESM|PHOSPHOGLYCERATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 2 PVDFAIDAR 10
PVDFA++ +
Sbjct: 272 PVDFAVEYK 280


>sp|PGK_PYRAE|PHOSPHOGLYCERATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PVDFAID 8
PVDFA++
Sbjct: 281 PVDFAVN 287


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 VDFAIDA 9
+D+AIDA
Sbjct: 1048 IDYAIDA 1054


>sp|KHSE_METJA|HOMOSERINE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LPVDFAID 8
+P+DF +D
Sbjct: 160 IPIDFKLD 167


>sp|PGK_SULTO|PHOSPHOGLYCERATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LPVDFAID 8
+PVDF ++
Sbjct: 280 IPVDFTVE 287




309|Sequence|1541|1550|AIDARDAGEG

>sp|SYE_SULTO|GLUTAMATE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 IDARDAGEG 10
+DA+DA EG
Sbjct: 455 LDAKDAEEG 463


>sp|AROD_METBF|3-DEHYDROQUINATE dehydratase|Methanosarcina barkeri (strain Fusaro /

Query: 1 AIDARDAG 8
A+DAR+AG
Sbjct: 180 ALDAREAG 187


>sp|THIC_NATPD|PHOSPHOMETHYLPYRIMIDINE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 DARDAGEG 10
DAR+AG+G
Sbjct: 423 DAREAGDG 430


>sp|AROK_METJA|SHIKIMATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AIDARDAG 8
AIDA DAG
Sbjct: 227 AIDALDAG 234




310|Sequence|1546|1555|DAGEGLLAVQ

>sp|Y714_METJA|UNCHARACTERIZED protein MJ0714|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DAGEGLLAV 9
DAGEG+L V
Sbjct: 84 DAGEGILVV 92


>sp|Y1340_METJA|UNCHARACTERIZED protein MJ1340|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DAGEGLLAV 9
DAGEG+L V
Sbjct: 80 DAGEGILVV 88


>sp|Y310_METJA|UNCHARACTERIZED protein MJ0310|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DAGEGLLAV 9
DAGEG+L V
Sbjct: 80 DAGEGILVV 88


>sp|PYRI_METB6|ASPARTATE carbamoyltransferase regulatory chain|Methanoregula boonei

Query: 1 DAGEGLL 7
D GEGLL
Sbjct: 12 DEGEGLL 18


>sp|AATI_AERPE|A-TYPE ATP synthase subunit I|Aeropyrum pernix (strain ATCC 700893

Query: 1 DAGEGLLAV 9
DAG+GLL +
Sbjct: 369 DAGQGLLVL 377


>sp|AATB_HALVD|A-TYPE ATP synthase subunit B|Haloferax volcanii (strain ATCC 29605

Query: 1 DAGEGLLAVQ 10
++ EGL+A+Q
Sbjct: 45 ESSEGLVAIQ 54


>sp|MTBA_METBA|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina barkeri

Query: 1 DAGEGLLAV 9
DAG GLL V
Sbjct: 306 DAGVGLLTV 314




311|Sequence|1551|1560|LLAVQITDQE

>sp|PCKG_SULAC|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LLAVQITD 8
+LAVQITD
Sbjct: 144 ILAVQITD 151


>sp|PCKG_SACS2|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LLAVQITD 8
+LAVQ+TD
Sbjct: 144 ILAVQVTD 151


>sp|SYW_THESM|TRYPTOPHAN--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 2 LAVQITDQE 10
L VQITD E
Sbjct: 107 LYVQITDDE 115


>sp|SYW_PYRHO|TRYPTOPHAN--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LAVQITDQE 10
L +QITD E
Sbjct: 108 LYIQITDDE 116


>sp|SYW_PYRFU|TRYPTOPHAN--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LAVQITDQE 10
L +QITD E
Sbjct: 108 LYIQITDDE 116


>sp|SYW_PYRAB|TRYPTOPHAN--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 LAVQITDQE 10
L +QITD E
Sbjct: 108 LYIQITDDE 116


>sp|CSG_HALVD|CELL surface glycoprotein|Haloferax volcanii (strain ATCC 29605

Query: 1 LLAVQITDQE 10
LLA +ITD E
Sbjct: 120 LLAPRITDSE 129


>sp|SYW_THEON|TRYPTOPHAN--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 LAVQITDQE 10
L +QITD E
Sbjct: 107 LYIQITDDE 115


>sp|SYW_THEKO|TRYPTOPHAN--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LAVQITDQE 10
L +QITD E
Sbjct: 107 LYIQITDDE 115




312|Sequence|1556|1565|ITDQEGKPKR

>sp|GPMI1_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina barkeri (strain Fusaro /

Query: 1 ITDQEGKPK 9
ITD EGKP+
Sbjct: 244 ITDSEGKPE 252


>sp|RL14_METAC|LARGE ribosomal subunit protein uL14|Methanosarcina acetivorans (strain

Query: 1 ITDQEGKPK 9
ITD+EG PK
Sbjct: 97 ITDEEGIPK 105


>sp|RL14_METBF|LARGE ribosomal subunit protein uL14|Methanosarcina barkeri (strain

Query: 1 ITDQEGKPK 9
ITD+EG PK
Sbjct: 97 ITDEEGIPK 105


>sp|KADA_THEAC|ADENYLATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ITDQEGKPKR 10
IT++EGKP +
Sbjct: 162 ITNEEGKPDK 171


>sp|GLMS_METAC|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanosarcina acetivorans (strain

Query: 1 ITDQEGKPK 9
I D+EGKP+
Sbjct: 230 IFDREGKPR 238


>sp|FENR1_SULAC|FERREDOXIN--NADP reductase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ITDQEGKPK 9
I +QEG PK
Sbjct: 278 IVEQEGTPK 286


>sp|AMPPA_METM6|AMP phosphorylase|Methanococcus maripaludis (strain C6 /

Query: 1 ITDQEGKPKR 10
IT+Q G PK+
Sbjct: 397 ITEQGGTPKK 406


>sp|SUHB_AERPE|INOSITOL-1-MONOPHOSPHATASE pernix (strain ATCC 700893

Query: 1 ITDQEGKPKR 10
+TD G+P R
Sbjct: 228 VTDAHGQPLR 237


>sp|GPMI_METMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ITDQEGKPK 9
+TD EG P+
Sbjct: 247 VTDSEGNPE 255


>sp|AMPPA_METM5|AMP phosphorylase|Methanococcus maripaludis (strain C5 /

Query: 1 ITDQEGKPKR 10
IT+Q G PK+
Sbjct: 397 ITEQGGTPKK 406


>sp|FENR_SULTO|FERREDOXIN--NADP reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ITDQEGKPK 9
I QEG PK
Sbjct: 283 IASQEGAPK 291


>sp|COFE_METKA|COENZYME F420:L-glutamate ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 ITDQEGKPKR 10
ITD +G+P R
Sbjct: 153 ITDTQGRPFR 162


>sp|COFE_HALSA|COENZYME F420:L-glutamate ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 ITDQEGKPKR 10
+TD G+P R
Sbjct: 148 VTDTSGRPFR 157


>sp|COFE_HALS3|COENZYME F420:L-glutamate ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 ITDQEGKPKR 10
+TD G+P R
Sbjct: 148 VTDTSGRPFR 157


>sp|RS4_CALMQ|SMALL ribosomal subunit protein uS4|Caldivirga maquilingensis (strain

Query: 5 EGKPKR 10
EGKPKR
Sbjct: 13 EGKPKR 18


>sp|RNZ_IGNH4|RIBONUCLEASE Z|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 ITDQEGKPKR 10
+ ++EG PKR
Sbjct: 161 VLEREGLPKR 170


>sp|FENR2_SULAC|FERREDOXIN--NADP reductase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ITDQEGKPK 9
I QEG PK
Sbjct: 283 IASQEGVPK 291




313|Sequence|1561|1570|GKPKRAIVHD

>sp|GCST_THEGJ|PROBABLE aminomethyltransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 GKPKRAI 7
GKPKRA+
Sbjct: 374 GKPKRAV 380


>sp|CARA_METMA|CARBAMOYL phosphate synthase small chain|Methanosarcina mazei (strain ATCC

Query: 1 GKPKRAIVHD 10
GKPK A+V D
Sbjct: 178 GKPKHAVVVD 187


>sp|CARA_METAC|CARBAMOYL phosphate synthase small chain|Methanosarcina acetivorans (strain

Query: 1 GKPKRAIVHD 10
GKPK A+V D
Sbjct: 178 GKPKHAVVVD 187


>sp|PURO_THEKO|IMP cyclohydrolase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 KPKRAIVH 9
+P++A+VH
Sbjct: 84 RPRKALVH 91


>sp|BRIX_SACS2|PROBABLE Brix domain-containing ribosomal biogenesis|Saccharolobus

Query: 1 GKPKRAIVHD 10
G P R IV+D
Sbjct: 67 GNPLRIIVYD 76


>sp|Y1485_METJA|UNCHARACTERIZED cation transporter MJ1485|Methanocaldococcus jannaschii (strain

Query: 3 PKRAIVHD 10
PK A++H+
Sbjct: 363 PKSAVIHE 370


>sp|SYS_ARCFU|SERINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GKPKRAIVH 9
GKP + VH
Sbjct: 391 GKPSKGFVH 399


>sp|GCST_THEON|PROBABLE aminomethyltransferase|Thermococcus onnurineus (strain NA1)

Query: 1 GKPKRAI 7
GKPK+A+
Sbjct: 374 GKPKKAV 380


>sp|GCST_THEKO|PROBABLE aminomethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 GKPKRAI 7
GKPK+A+
Sbjct: 374 GKPKKAV 380


>sp|PGK_METLZ|PHOSPHOGLYCERATE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 GKPKRAIVH 9
G+P R ++H
Sbjct: 241 GEPSRNLIH 249




314|Sequence|1566|1575|AIVHDNKDGT

>sp|ADHS2_ARCFU|PUTATIVE 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase

Query: 2 IVHDNKD 8
IVHDN D
Sbjct: 249 IVHDNAD 255


>sp|UPPS_PYRAE|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Pyrobaculum

Query: 2 IVHDNK 7
++HDNK
Sbjct: 94 LIHDNK 99


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 3 VHDNKDGT 10
+ DN DGT
Sbjct: 125 IKDNSDGT 132


>sp|COBS_HALWD|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 AIVHDNKD 8
A+VHD D
Sbjct: 88 AVVHDTDD 95


>sp|ADHS_HALSA|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 AIVHDNKD 8
A+VHD+ D
Sbjct: 244 AVVHDDAD 251




315|Sequence|1571|1580|NKDGTYAVTY

>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 NKDGTYAVTY 10
NKD TYA+ Y
Sbjct: 236 NKDFTYAMVY 245


>sp|MTRB_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit B|Methanocaldococcus jannaschii

Query: 1 NKDGTYAVT 9
N+DG YA++
Sbjct: 67 NRDGVYAIS 75


>sp|SECF_HALVD|PROTEIN-EXPORT membrane protein SecF|Haloferax volcanii (strain ATCC 29605

Query: 3 DGTYAVTY 10
DGTY VT+
Sbjct: 85 DGTYVVTF 92


>sp|GCSPB_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 2 KDGTYAVTY 10
KDG Y+++Y
Sbjct: 308 KDGKYSLSY 316


>sp|ATGT_THEAC|TRNA-GUANINE(15) transglycosylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 NKDGTYAVTY 10
NK TYA TY
Sbjct: 385 NKKDTYAFTY 394


>sp|Y240_METJA|PUTATIVE adenylate cyclase MJ0240|Methanocaldococcus jannaschii (strain

Query: 1 NKDGTYAVTY 10
++DG + VTY
Sbjct: 56 DEDGNFFVTY 65


>sp|Y810_METJA|PROTEIN MJ0810|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KDGTYAVTY 10
++GT+AV Y
Sbjct: 7 EEGTFAVRY 15


>sp|Y1498_SULAC|PARB-LIKE protein Saci_1498|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 DGTYAVTY 10
DG Y V+Y
Sbjct: 107 DGKYCVSY 114


>sp|RL2_KORCO|LARGE ribosomal subunit protein uL2|Korarchaeum cryptofilum (strain OPF8)

Query: 2 KDGTYAVTY 10
+ GTYA+ +
Sbjct: 122 RSGTYAIVF 130


>sp|HIS6_METBU|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcoides burtonii

Query: 1 NKDGTY 6
N+DGTY
Sbjct: 196 NRDGTY 201


>sp|Y925_METM7|UNCHARACTERIZED solute-binding protein MmarC7_0925|Methanococcus maripaludis

Query: 1 NKDGTYAV 8
N DGTY V
Sbjct: 194 NADGTYLV 201


>sp|Y1756_METM5|UNCHARACTERIZED solute-binding protein MmarC5_1756|Methanococcus maripaludis

Query: 1 NKDGTYAV 8
N DGTY V
Sbjct: 197 NADGTYLV 204


>sp|Y1652_METMP|UNCHARACTERIZED solute-binding protein MMP1652|Methanococcus maripaludis (strain

Query: 1 NKDGTYAVT 9
N DGTY +
Sbjct: 182 NADGTYCIV 190


>sp|SYP_METMJ|PROLINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 TYAVTY 10
TYA+TY
Sbjct: 240 TYAITY 245


>sp|G3P_METFO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobacterium formicicum

Query: 1 NKDGTY 6
NK+GTY
Sbjct: 94 NKEGTY 99




316|Sequence|1576|1585|YAVTYIPDKT

>sp|FOR_THELN|TUNGSTEN-CONTAINING formaldehyde ferredoxin oxidoreductase|Thermococcus litoralis

Query: 1 YAVTYIPDK 9
Y +TY P+K
Sbjct: 464 YKITYDPEK 472


>sp|GLKA_PYRHO|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus horikoshii (strain ATCC

Query: 1 YAVTYIPDK 9
Y +T+IP K
Sbjct: 422 YQLTFIPTK 430


>sp|Y951_METJA|UNCHARACTERIZED protein MJ0951|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 YIPDKT 10
YIP+KT
Sbjct: 149 YIPEKT 154


>sp|CSA2A_SACS2|CRISPR-ASSOCIATED protein Cas7/Csa2 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YAVTYIP 7
Y VTY+P
Sbjct: 48 YTVTYVP 54




317|Sequence|1581|1590|IPDKTGRYMI

>sp|VHTG_METMA|F420 non-reducing hydrogenase II small|Methanosarcina mazei (strain ATCC

Query: 2 PDKTGRYMI 10
PD +GRY++
Sbjct: 144 PDGSGRYLV 152


>sp|VHOG_METMA|F420 non-reducing hydrogenase I small|Methanosarcina mazei (strain ATCC

Query: 2 PDKTGRYMI 10
PD +GRY++
Sbjct: 144 PDGSGRYLV 152


>sp|MALA_HALJT|ALPHA-AMYLASE MalA|Haloarcula japonica (strain ATCC 49778

Query: 1 IPDKTGRYMI 10
+PD GRY++
Sbjct: 53 VPDAPGRYVV 62


>sp|DTDA_STAMF|D-AMINOACYL-TRNA deacylase|Staphylothermus marinus (strain ATCC 43588

Query: 1 IPDKTGRYMI 10
+PDK RY++
Sbjct: 65 LPDKVSRYIV 74


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 1 IPDKTGRYMI 10
+PD+ GRY I
Sbjct: 349 LPDEEGRYEI 358


>sp|PAN_METHJ|PROTEASOME-ACTIVATING nucleotidase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 IPDKTGRYMI 10
+PD GRY I
Sbjct: 323 LPDTEGRYSI 332


>sp|NUCS_PYRAE|ENDONUCLEASE NucS|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 DKTGRYMI 10
DK GRY+I
Sbjct: 169 DKNGRYVI 176


>sp|Y409_METJA|UNCHARACTERIZED protein MJ0409|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IPDKTGRYMI 10
IPD++G Y I
Sbjct: 313 IPDESGSYAI 322


>sp|Y581_THEON|UPF0127 protein TON_0581|Thermococcus onnurineus (strain NA1)

Query: 1 IPDKTGRYMI 10
+P K RY+I
Sbjct: 85 VPKKAARYII 94


>sp|AATF_METTH|A-TYPE ATP synthase subunit F|Methanothermobacter thermautotrophicus

Query: 1 IPDKTG 6
IPDKTG
Sbjct: 78 IPDKTG 83


>sp|RLME_HALSA|RIBOSOMAL RNA large subunit methyltransferase|Halobacterium salinarum (strain

Query: 2 PDKTGRY 8
PD TG Y
Sbjct: 115 PDMTGEY 121


>sp|RLME_HALS3|RIBOSOMAL RNA large subunit methyltransferase|Halobacterium salinarum (strain

Query: 2 PDKTGRY 8
PD TG Y
Sbjct: 115 PDMTGEY 121


>sp|Y697_METVS|MEMO1 family protein Mevan_0697|Methanococcus vannielii (strain ATCC

Query: 1 IPDKTGRY 8
+P K GRY
Sbjct: 36 LPSKLGRY 43


>sp|LIPA_METAR|LIPOYL synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 IPDKTGR 7
IPD TGR
Sbjct: 140 IPDFTGR 146


>sp|TRUD_THEVO|PROBABLE tRNA pseudouridine synthase D|Thermoplasma volcanium (strain ATCC

Query: 2 PDKTGRYMI 10
PD G+Y I
Sbjct: 30 PDPNGKYTI 38


>sp|NADB_PYRFU|L-ASPARTATE oxidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IPDKTGRYMI 10
I ++TG+Y+I
Sbjct: 113 IKNETGKYII 122




318|Sequence|1586|1595|GRYMIGVTYG

>sp|RPO1N_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermoplasma acidophilum (strain ATCC

Query: 1 GRYMIGVTY 9
GRY+ GV Y
Sbjct: 378 GRYVTGVNY 386


>sp|DPOL1_SULAC|DNA polymerase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GRYMIGVTY 9
GRY+I TY
Sbjct: 631 GRYIITTTY 639


>sp|LHRC_METTH|ATP-DEPENDENT helicase Lhr-Core|Methanothermobacter thermautotrophicus (strain

Query: 1 GRYMIGVTYG 10
R+++G +YG
Sbjct: 222 ARFLVGYSYG 231


>sp|HTPX_THEAC|PROTEASE HtpX homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GRYMIGVTY 9
G YMIG Y
Sbjct: 62 GPYMIGAVY 70


>sp|KATG_METB6|CATALASE-PEROXIDASE boonei (strain DSM 21154

Query: 1 GRYMIGVTYG 10
G +IG TYG
Sbjct: 620 GLRVIGATYG 629


>sp|PURQ_PICTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Picrophilus torridus (strain ATCC 700027

Query: 1 GRYMIGVTYG 10
GR++IGV G
Sbjct: 88 GRFIIGVCNG 97


>sp|APGM2_METTH|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanothermobacter thermautotrophicus

Query: 1 GRYMIGVTY 9
GR+ GV+Y
Sbjct: 136 GRFYAGVSY 144


>sp|RS19_METM5|SMALL ribosomal subunit protein uS19|Methanococcus maripaludis (strain C5

Query: 4 MIGVTYG 10
MIG+T+G
Sbjct: 105 MIGLTFG 111


>sp|RS19_METM7|SMALL ribosomal subunit protein uS19|Methanococcus maripaludis (strain C7

Query: 4 MIGVTYG 10
MIG+T+G
Sbjct: 105 MIGLTFG 111


>sp|RS19_METMP|SMALL ribosomal subunit protein uS19|Methanococcus maripaludis (strain

Query: 4 MIGVTYG 10
MIG+T+G
Sbjct: 105 MIGLTFG 111


>sp|RS19_METM6|SMALL ribosomal subunit protein uS19|Methanococcus maripaludis (strain C6

Query: 4 MIGVTYG 10
MIG+T+G
Sbjct: 105 MIGLTFG 111




319|Sequence|1591|1600|GVTYGGDDIP

>sp|Y3544_METJA|UNCHARACTERIZED protein MJECL44|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 GGDDIP 10
GGDDIP
Sbjct: 66 GGDDIP 71


>sp|Y348_THEGJ|UPF0215 protein TGAM_0348|Thermococcus gammatolerans (strain DSM 15229

Query: 1 GVTYGGDDI 9
GVTYGG +I
Sbjct: 81 GVTYGGFNI 89


>sp|DPHB_HALLT|DIPHTHINE synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 4 YGGDDIP 10
+GGDD+P
Sbjct: 141 HGGDDVP 147


>sp|Y4269_METAC|UPF0215 protein MA_4269|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GVTYGGDDI 9
GVTYGG ++
Sbjct: 78 GVTYGGFNV 86


>sp|RNZ_SACI6|RIBONUCLEASE Z|Saccharolobus islandicus (strain M.16.4 /

Query: 2 VTYGGDDIP 10
V Y GD IP
Sbjct: 196 VAYTGDTIP 204


>sp|RNZ_SACI4|RIBONUCLEASE Z|Saccharolobus islandicus (strain M.14.25 /

Query: 2 VTYGGDDIP 10
V Y GD IP
Sbjct: 196 VAYTGDTIP 204


>sp|RNZ_SACI3|RIBONUCLEASE Z|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 VTYGGDDIP 10
V Y GD IP
Sbjct: 196 VAYTGDTIP 204


>sp|RNZ_SACI2|RIBONUCLEASE Z|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 VTYGGDDIP 10
V Y GD IP
Sbjct: 196 VAYTGDTIP 204


>sp|RNZ_SACI7|RIBONUCLEASE Z|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 VTYGGDDIP 10
V Y GD IP
Sbjct: 196 VAYTGDTIP 204


>sp|RNZ_SACI1|RIBONUCLEASE Z|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 VTYGGDDIP 10
V Y GD IP
Sbjct: 196 VAYTGDTIP 204


>sp|SYH_METPE|HISTIDINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 YGGDDIP 10
+GGDD P
Sbjct: 288 FGGDDAP 294


>sp|PYCA_METJA|PYRUVATE carboxylase subunit A|Methanocaldococcus jannaschii (strain ATCC

Query: 4 YGGDDIP 10
YGG +IP
Sbjct: 372 YGGAEIP 378


>sp|SYP_METS5|PROLINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 2 VTYGGDD 8
VT+GG+D
Sbjct: 94 VTHGGED 100


>sp|Y1007_METMA|UPF0215 protein MM_1007|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GVTYGGDDI 9
G+TYGG ++
Sbjct: 78 GITYGGFNV 86


>sp|PORA_METBF|PYRUVATE synthase subunit PorA|Methanosarcina barkeri (strain Fusaro /

Query: 2 VTYGGDDIP 10
+ +GG DIP
Sbjct: 361 IGHGGRDIP 369


>sp|TREH2_SULAC|TREHALASE 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 YGGDDI 9
YGGD+I
Sbjct: 446 YGGDEI 451


>sp|HERA_PYRFU|DNA double-strand break repair helicase|Pyrococcus furiosus (strain

Query: 4 YGGDDI 9
YGG+DI
Sbjct: 523 YGGEDI 528


>sp|RL18_THEVO|LARGE ribosomal subunit protein uL18|Thermoplasma volcanium (strain ATCC

Query: 1 GVTYGGDDIP 10
G+T G DIP
Sbjct: 114 GITDSGVDIP 123


>sp|Y1625_ARCFU|UNCHARACTERIZED protein AF_1625|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VTYGGD 7
V+YGGD
Sbjct: 193 VSYGGD 198


>sp|Y1150_METJA|UPF0215 protein MJ1150|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GVTYGGDDI 9
G+T+GG +I
Sbjct: 76 GITFGGFNI 84


>sp|SYH_METB6|HISTIDINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 4 YGGDDI 9
+GGDD+
Sbjct: 288 FGGDDV 293


>sp|Y1534_PYRCJ|UPF0284 protein Pcal_1534|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GVTYGGDDIP 10
GV Y G+ IP
Sbjct: 133 GVVYLGESIP 142


>sp|WECC_META3|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GVTYGGD 7
G+TY GD
Sbjct: 320 GITYKGD 326


>sp|SYH_METLZ|HISTIDINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 YGGDDIP 10
+GG D+P
Sbjct: 288 FGGKDVP 294


>sp|RNZ_META3|RIBONUCLEASE Z|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 VTYGGDDIP 10
V Y GD +P
Sbjct: 205 VAYSGDTMP 213


>sp|PELO_KORCO|PROTEIN pelota homolog|Korarchaeum cryptofilum (strain OPF8)

Query: 2 VTYGGDDI 9
VTYG D++
Sbjct: 279 VTYGVDEV 286


>sp|THIE_HALMA|THIAMINE-PHOSPHATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GVTYGGDDIP 10
GV G DD+P
Sbjct: 81 GVHLGDDDLP 90


>sp|Y619_METBF|UPF0215 protein Mbar_A0619|Methanosarcina barkeri (strain Fusaro /

Query: 1 GVTYGGDDI 9
G+TYGG ++
Sbjct: 78 GITYGGFNV 86


>sp|THIE_NATPD|THIAMINE-PHOSPHATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GVTYGGDDIP 10
GV G DD+P
Sbjct: 82 GVHLGDDDLP 91


>sp|SYH_METMA|HISTIDINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 YGGDDIP 10
+GG D+P
Sbjct: 293 FGGGDVP 299


>sp|SYE_CENSY|GLUTAMATE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 3 TYGGDDI 9
TY GDDI
Sbjct: 478 TYTGDDI 484


>sp|SYH_METAC|HISTIDINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 YGGDDIP 10
+GG D+P
Sbjct: 293 FGGGDVP 299


>sp|THIE_HALWD|THIAMINE-PHOSPHATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GVTYGGDDIP 10
GV G DD+P
Sbjct: 82 GVHLGDDDLP 91




320|Sequence|1596|1605|GDDIPLSPYR

>sp|THIC_METB6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoregula boonei (strain DSM 21154

Query: 4 IPLSPYR 10
IP+SPYR
Sbjct: 41 IPVSPYR 47


>sp|THIC_METPE|PHOSPHOMETHYLPYRIMIDINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 IPLSPYR 10
IP+SPYR
Sbjct: 41 IPVSPYR 47


>sp|THIC_METHJ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 IPLSPYR 10
IP+SPYR
Sbjct: 41 IPVSPYR 47


>sp|THIC_METMJ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 IPLSPYR 10
IP+SPYR
Sbjct: 41 IPVSPYR 47


>sp|RTCA_METS5|RNA 3'-terminal phosphate cyclase|Metallosphaera sedula (strain ATCC

Query: 1 GDDIPLSP 8
G D+PLSP
Sbjct: 118 GTDVPLSP 125


>sp|THIC_METLZ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 IPLSPYR 10
IP++PYR
Sbjct: 41 IPMTPYR 47


>sp|RTCA_IGNH4|RNA 3'-terminal phosphate cyclase|Ignicoccus hospitalis (strain KIN4/I

Query: 1 GDDIPLSP 8
G D+P+SP
Sbjct: 120 GTDVPMSP 127


>sp|GVPC2_HALSA|GAS vesicle protein C2|Halobacterium salinarum (strain ATCC 700922

Query: 1 GDDIPLSP 8
G+D+PL P
Sbjct: 274 GEDVPLRP 281


>sp|Y2022_ARCFU|UNCHARACTERIZED protein AF_2022|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 PLSPYR 10
P+SPYR
Sbjct: 93 PISPYR 98


>sp|PELO_THEGJ|PROTEIN pelota homolog|Thermococcus gammatolerans (strain DSM 15229

Query: 2 DDIPLSPY 9
DD+PL Y
Sbjct: 91 DDVPLGKY 98


>sp|PELO_PYRAB|PROTEIN pelota homolog|Pyrococcus abyssi (strain GE5 /

Query: 2 DDIPLSPY 9
DD+PL Y
Sbjct: 91 DDVPLGKY 98


>sp|GVPC_HALMT|GAS vesicle protein C|Haloferax mediterranei (strain ATCC 33500

Query: 1 GDDIPLSP 8
G+D+PL P
Sbjct: 370 GEDVPLRP 377


>sp|GVPC1_HALSA|GAS vesicle protein C1|Halobacterium salinarum (strain ATCC 700922

Query: 1 GDDIPLSP 8
G+D+PL P
Sbjct: 371 GEDVPLRP 378


>sp|RTCB_METJA|TRNA-SPLICING ligase RtcB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GDDIPLSPY 9
GDD+ + PY
Sbjct: 186 GDDVIVYPY 194


>sp|ATGT_META3|TRNA-GUANINE(15) transglycosylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 DIPLSPY 9
DIP +PY
Sbjct: 123 DIPTAPY 129


>sp|DNLI2_KORCO|DNA ligase 2|Korarchaeum cryptofilum (strain OPF8)

Query: 1 GDDIPLSP 8
GD+I LSP
Sbjct: 525 GDEITLSP 532


>sp|THIE_METHJ|THIAMINE-PHOSPHATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 DDIPLSPYR 10
DD+PLS R
Sbjct: 86 DDLPLSAAR 94


>sp|Y3544_METJA|UNCHARACTERIZED protein MJECL44|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GDDIPL 6
GDDIP+
Sbjct: 67 GDDIPV 72


>sp|RTCA_KORCO|RNA 3'-terminal phosphate cyclase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 GDDIPLSP 8
G D+PL+P
Sbjct: 122 GTDVPLAP 129


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 3 DIPLSPY 9
DIP PY
Sbjct: 536 DIPFHPY 542


>sp|ATGT_METST|TRNA-GUANINE(15) transglycosylase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 DIPLSPY 9
DIP +PY
Sbjct: 125 DIPTAPY 131


>sp|AATA_SULTO|A-TYPE ATP synthase subunit A|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GDDIPLSPYR 10
GD+IP+ Y+
Sbjct: 182 GDEIPVKMYQ 191


>sp|RTCA_AERPE|RNA 3'-terminal phosphate cyclase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GDDIPLSP 8
G D+P++P
Sbjct: 125 GTDVPMAP 132


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 3 DIPLSPY 9
+IPL PY
Sbjct: 527 EIPLHPY 533


>sp|PCNA_METTH|DNA polymerase sliding clamp|Methanothermobacter thermautotrophicus

Query: 1 GDDIPL 6
GDD+PL
Sbjct: 214 GDDMPL 219




321|Sequence|1601|1610|LSPYRIRATQ

>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SPYRIRA 8
SPYR+RA
Sbjct: 426 SPYRVRA 432


>sp|CPGS_METKA|CYCLIC 2,3-diphosphoglycerate synthetase|Methanopyrus kandleri (strain

Query: 1 LSPYRIR 7
L PYRIR
Sbjct: 286 LGPYRIR 292


>sp|MES_EURX9|METALLOPTERIN-DEPENDENT ergothioneine synthase|Euryarchaeota archaeon (strain ADurb.Bin009)

Query: 3 PYRIRA 8
PYRIRA
Sbjct: 397 PYRIRA 402


>sp|KAE1B_HALSA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 LSPYRIRA 8
LSP R+RA
Sbjct: 420 LSPARVRA 427


>sp|RL11_DESA1|LARGE ribosomal subunit protein uL11|Desulfurococcus amylolyticus

Query: 1 LSPYRIRATQ 10
LSPY++ Q
Sbjct: 25 LSPYKVNIPQ 34




322|Sequence|1606|1615|IRATQTGDAS

>sp|FEN_CENSY|FLAP endonuclease 1|Cenarchaeum symbiosum (strain A)

Query: 4 TQTGDA 9
TQTGDA
Sbjct: 161 TQTGDA 166




323|Sequence|1611|1620|TGDASKCLAT

>sp|Y1758_ARCFU|UNCHARACTERIZED protein AF_1758|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GDASKCLAT 10
GD+S CLAT
Sbjct: 182 GDSSLCLAT 190


>sp|AROA_METLZ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanocorpusculum labreanum (strain ATCC

Query: 1 TGDASKC 7
TGDAS C
Sbjct: 112 TGDASLC 118




324|Sequence|1616|1625|KCLATGPGIA

>sp|Y959_METJA|UNCHARACTERIZED aminotransferase MJ0959|Methanocaldococcus jannaschii (strain ATCC

Query: 1 KCLATGPGIA 10
KCLA PG+A
Sbjct: 194 KCLAAPPGLA 203


>sp|GSA_THEAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 CLATGPGI 9
CLA GP I
Sbjct: 52 CLAYGPSI 59


>sp|PTH_THESM|PEPTIDYL-TRNA hydrolase|Thermococcus sibiricus (strain DSM 12597

Query: 2 CLATGPG 8
CLA GPG
Sbjct: 97 CLAIGPG 103


>sp|GSA_METMA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 CLATGPGI 9
CLA GP I
Sbjct: 59 CLAYGPAI 66


>sp|GSA_META3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 CLATGPGI 9
CLA GP +
Sbjct: 62 CLAYGPAV 69


>sp|GSA_METBU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcoides burtonii (strain DSM 6242

Query: 2 CLATGPGI 9
CLA GP I
Sbjct: 56 CLAYGPNI 63


>sp|THIC_ARCFU|PHOSPHOMETHYLPYRIMIDINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KCLATGPG 8
+C+ GPG
Sbjct: 257 QCMVEGPG 264


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 2 CLATGPGIA 10
CL G GIA
Sbjct: 244 CLVLGEGIA 252


>sp|IPYR_AERPE|INORGANIC pyrophosphatase|Aeropyrum pernix (strain ATCC 700893

Query: 2 CLATGPG 8
CL GPG
Sbjct: 4 CLKIGPG 10


>sp|THIC2_METTH|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 KCLATGPG 8
+C+ GPG
Sbjct: 260 QCMVEGPG 267


>sp|GSA_METAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 CLATGPGI 9
CLA GP +
Sbjct: 59 CLAYGPAV 66


>sp|THIC_METJA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KCLATGPG 8
+C+ GPG
Sbjct: 260 QCMVEGPG 267


>sp|PTH_THEON|PEPTIDYL-TRNA hydrolase|Thermococcus onnurineus (strain NA1)

Query: 2 CLATGPG 8
CLA GP
Sbjct: 97 CLAVGPA 103


>sp|COFC_METB6|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanoregula boonei (strain DSM 21154

Query: 3 LATGPGI 9
LATGP I
Sbjct: 95 LATGPAI 101




325|Sequence|1621|1630|GPGIASTVKT

>sp|SAT_HYPBU|SULFATE adenylyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 2 PGIASTVK 9
PG+A T+K
Sbjct: 138 PGVAKTMK 145


>sp|SYC_METMA|CYSTEINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GPGIASTVKT 10
GPG T+KT
Sbjct: 342 GPGDLETLKT 351


>sp|KAE1_NANEQ|TRNA N6-adenosine threonylcarbamoyltransferase|Nanoarchaeum equitans

Query: 1 GPGIASTVK 9
GPG+ T+K
Sbjct: 76 GPGLLPTLK 84




326|Sequence|1626|1635|STVKTGEEVG

>sp|EF2_THEKO|ELONGATION factor 2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 TVKTGEEV 9
TVKTG+EV
Sbjct: 317 TVKTGQEV 324


>sp|EF2_THEON|ELONGATION factor 2|Thermococcus onnurineus (strain NA1)

Query: 2 TVKTGEEV 9
TVKTG+EV
Sbjct: 317 TVKTGQEV 324


>sp|EF2_THESM|ELONGATION factor 2|Thermococcus sibiricus (strain DSM 12597

Query: 2 TVKTGEEV 9
TVKTG+EV
Sbjct: 317 TVKTGQEV 324


>sp|EF2_THEGJ|ELONGATION factor 2|Thermococcus gammatolerans (strain DSM 15229

Query: 2 TVKTGEEV 9
TVKTG+EV
Sbjct: 317 TVKTGQEV 324


>sp|SYH_METTH|HISTIDINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 TVKTGEEV 9
TVK+GEEV
Sbjct: 51 TVKSGEEV 58


>sp|EF2_PYRAB|ELONGATION factor 2|Pyrococcus abyssi (strain GE5 /

Query: 2 TVKTGEEV 9
TVK+G+EV
Sbjct: 317 TVKSGQEV 324


>sp|Y196_THEAC|PUTATIVE ankyrin repeat protein Ta0196|Thermoplasma acidophilum (strain

Query: 1 STVKTGEE 8
ST+KTG++
Sbjct: 25 STIKTGDK 32


>sp|EF2_PYRHO|ELONGATION factor 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 TVKTGEEV 9
TVK+G+EV
Sbjct: 317 TVKSGQEV 324


>sp|MAP2_METTH|METHIONINE aminopeptidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 STVKTGEEVG 10
ST++ G EVG
Sbjct: 125 STIRAGVEVG 134




327|Sequence|1631|1640|GEEVGFVVDA

>sp|GGR1_METBU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 1|Methanococcoides burtonii (strain DSM 6242

Query: 1 GEEVGFVVD 9
G EVG+V+D
Sbjct: 90 GSEVGYVLD 98


>sp|GGR_METMJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GEEVGFVVD 9
G EVG+V+D
Sbjct: 90 GNEVGYVLD 98


>sp|GGR_METPE|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 GEEVGFVVD 9
G EVG+++D
Sbjct: 90 GNEVGYILD 98


>sp|SYFB_KORCO|PHENYLALANINE--TRNA ligase beta subunit|Korarchaeum cryptofilum (strain OPF8)

Query: 1 GEEVGFVVDA 10
GEEVGF V +
Sbjct: 38 GEEVGFEVTS 47


>sp|GGR_THEVO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GEEVGFVVD 9
G EVGFV++
Sbjct: 91 GNEVGFVLE 99


>sp|GGR_PICTO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Picrophilus torridus (strain ATCC 700027

Query: 1 GEEVGFVVD 9
G EVG+VV+
Sbjct: 92 GNEVGYVVE 100


>sp|GGR_METAR|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanocella arvoryzae (strain DSM 22066

Query: 1 GEEVGFVVD 9
G EVGFV++
Sbjct: 90 GNEVGFVLE 98


>sp|ENO_THEKO|ENOLASE kodakarensis (strain ATCC BAA-918

Query: 1 GEEVGFVVDA 10
G+E+ F +DA
Sbjct: 237 GDEIAFALDA 246


>sp|ENO_THEGJ|ENOLASE gammatolerans (strain DSM 15229

Query: 1 GEEVGFVVDA 10
G+E+ F +DA
Sbjct: 237 GDEIAFALDA 246


>sp|SPSS1_METAR|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanocella arvoryzae (strain DSM 22066

Query: 2 EEVGFVVD 9
E++GFV+D
Sbjct: 366 EKLGFVMD 373


>sp|RFHPS_METTH|BETA-RIBOFURANOSYLPHENOL 5'-phosphate synthase|Methanothermobacter thermautotrophicus

Query: 2 EEVGFVVDA 10
E+ GF+VDA
Sbjct: 146 EDGGFIVDA 154


>sp|CETZ3_HALVD|TUBULIN-LIKE protein CetZ3|Haloferax volcanii (strain ATCC 29605

Query: 3 EVGFVVDA 10
+ GFVVDA
Sbjct: 27 KTGFVVDA 34


>sp|GGR_METTP|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GEEVGFVVD 9
G+EVG+V++
Sbjct: 88 GDEVGYVLE 96


>sp|PPSA_ARCFU|PROBABLE phosphoenolpyruvate synthase|Archaeoglobus fulgidus (strain ATCC

Query: 5 GFVVDA 10
GFVVDA
Sbjct: 37 GFVVDA 42




328|Sequence|1636|1645|FVVDAKTAGK

>sp|METE_METTH|METHIONINE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 VVDAKTAGK 10
+VD KTAG+
Sbjct: 177 IVDMKTAGR 185


>sp|PPSA_ARCFU|PROBABLE phosphoenolpyruvate synthase|Archaeoglobus fulgidus (strain ATCC

Query: 1 FVVDAKT 7
FVVDA+T
Sbjct: 38 FVVDART 44




329|Sequence|1641|1650|KTAGKGKVTC

>sp|RL15_META3|LARGE ribosomal subunit protein uL15|Methanococcus aeolicus (strain ATCC

Query: 1 KTAGKGKVTC 10
K GKGK+TC
Sbjct: 107 KVLGKGKITC 116


>sp|RFCS_HALMA|REPLICATION factor C small subunit|Haloarcula marismortui (strain ATCC 43049

Query: 3 AGKGKVTC 10
AG GK TC
Sbjct: 56 AGTGKTTC 63


>sp|RFCS_METLZ|REPLICATION factor C small subunit|Methanocorpusculum labreanum (strain ATCC

Query: 2 TAGKGKVTC 10
+AG GK TC
Sbjct: 47 SAGVGKTTC 55


>sp|GPN_PYRAB|GPN-LOOP GTPase PAB0955|Pyrococcus abyssi (strain GE5 /

Query: 2 TAGKGKVT 9
TAG GK T
Sbjct: 8 TAGSGKTT 15


>sp|EF2_THEAC|ELONGATION factor 2|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 AGKGKV 8
AGKGKV
Sbjct: 329 AGKGKV 334


>sp|TBP_THEVO|TATA-BOX-BINDING protein|Thermoplasma volcanium (strain ATCC 51530

Query: 4 GKGKVTC 10
G GKV C
Sbjct: 152 GSGKVVC 158


>sp|TBP_THEAC|TATA-BOX-BINDING protein|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 GKGKVTC 10
G GKV C
Sbjct: 152 GSGKVVC 158


>sp|TBP_PICTO|TATA-BOX-BINDING protein|Picrophilus torridus (strain ATCC 700027

Query: 4 GKGKVTC 10
G GKV C
Sbjct: 152 GSGKVVC 158


>sp|TBP_METS3|TATA-BOX-BINDING protein|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 GKGKVTC 10
G GKV C
Sbjct: 149 GSGKVVC 155


>sp|PURA_THEVO|ADENYLOSUCCINATE synthetase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 GKGKVT 9
GKGK+T
Sbjct: 24 GKGKIT 29


>sp|TBP_METST|TATA-BOX-BINDING protein|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 GKGKVTC 10
G GKV C
Sbjct: 149 GSGKVVC 155


>sp|RL15_METJA|LARGE ribosomal subunit protein uL15|Methanocaldococcus jannaschii

Query: 1 KTAGKGKVTC 10
K GKGKVT
Sbjct: 107 KVLGKGKVTI 116




330|Sequence|1646|1655|GKVTCTVLTP

>sp|GIN15_SULAC|DNA replication complex GINS protein|Sulfolobus acidocaldarius (strain

Query: 1 GKVTCTVLTP 10
GK+ C V+ P
Sbjct: 102 GKILCKVVNP 111


>sp|NADK_METKA|NAD kinase|Methanopyrus kandleri (strain AV19 /

Query: 2 KVTCTVLTP 10
+V C+++TP
Sbjct: 193 QVECSIITP 201


>sp|DHQS_METAR|3-DEHYDROQUINATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 4 TCTVLTP 10
TC+++TP
Sbjct: 219 TCSLMTP 225


>sp|AROC_METMA|CHORISMATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GKVTCT 6
GKVTC+
Sbjct: 271 GKVTCS 276


>sp|RL15_META3|LARGE ribosomal subunit protein uL15|Methanococcus aeolicus (strain ATCC

Query: 1 GKVTCTVL 8
GK+TC ++
Sbjct: 112 GKITCPMI 119




331|Sequence|1651|1660|TVLTPDGTEA

>sp|SYT_PYRAR|THREONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 VLTPDGTE 9
VLTPDG E
Sbjct: 155 VLTPDGAE 162


>sp|SYT_PYRCJ|THREONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 VLTPDGTE 9
VLTPDG E
Sbjct: 155 VLTPDGRE 162


>sp|SYT_STAMF|THREONINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 VLTPDG 7
+LTPDG
Sbjct: 156 ILTPDG 161


>sp|SYT_CENSY|THREONINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 2 VLTPDG 7
VLTPDG
Sbjct: 156 VLTPDG 161


>sp|Y133_METTH|PUTATIVE ABC transporter ATP-binding protein|Methanothermobacter

Query: 5 PDGTEA 10
PDGTEA
Sbjct: 16 PDGTEA 21


>sp|ECFA_METST|ENERGY-COUPLING factor transporter ATP-binding protein|Methanosphaera stadtmanae

Query: 5 PDGTEA 10
PDGTEA
Sbjct: 15 PDGTEA 20


>sp|SYV_SACS2|VALINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VLTPDGT 8
VL PDGT
Sbjct: 565 VLGPDGT 571


>sp|RIO2_METJA|RIO-TYPE serine/threonine-protein kinase Rio2|Methanocaldococcus

Query: 1 TVLTPDGTEA 10
TVL DG EA
Sbjct: 81 TVLLSDGREA 90


>sp|SYT_METBU|THREONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 VLTPDG 7
+LTPDG
Sbjct: 175 ILTPDG 180


>sp|SYT_METHJ|THREONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 VLTPDGT 8
VLTP+GT
Sbjct: 156 VLTPEGT 162


>sp|SYT_PYRIL|THREONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 VLTPDGTE 9
VLTP G E
Sbjct: 155 VLTPSGEE 162


>sp|Y583_METTM|PUTATIVE ABC transporter ATP-binding protein|Methanothermobacter

Query: 5 PDGTEA 10
PDGTEA
Sbjct: 14 PDGTEA 19


>sp|SYV_SULTO|VALINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VLTPDGT 8
VL PDGT
Sbjct: 539 VLGPDGT 545


>sp|SYFB_METBU|PHENYLALANINE--TRNA ligase beta subunit|Methanococcoides burtonii (strain DSM 6242

Query: 2 VLTPDGTE 9
V+ PDGTE
Sbjct: 257 VVYPDGTE 264


>sp|SYT_METBF|THREONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 VLTPDG 7
+LTPDG
Sbjct: 175 ILTPDG 180


>sp|PELO_CALMQ|PROTEIN pelota homolog|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 VLTPDGTE 9
++ PDG+E
Sbjct: 311 IIVPDGSE 318


>sp|Y1226_ARCFU|UNCHARACTERIZED protein AF_1226|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TVLTPDG 7
T+LTPDG
Sbjct: 81 TLLTPDG 87


>sp|SYV_SULAC|VALINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 VLTPDGT 8
VL PDGT
Sbjct: 557 VLGPDGT 563


>sp|HEM3_IGNH4|PROBABLE porphobilinogen deaminase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 TVLTPDGTE 9
TVL+P G E
Sbjct: 260 TVLSPSGRE 268


>sp|SYT_METMA|THREONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VLTPDG 7
+LTPDG
Sbjct: 174 ILTPDG 179


>sp|SYT_METAC|THREONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 VLTPDG 7
+LTPDG
Sbjct: 175 ILTPDG 180


>sp|PURO_HALSA|IMP cyclohydrolase|Halobacterium salinarum (strain ATCC 700922

Query: 2 VLTPDGT 8
VL PDGT
Sbjct: 110 VLAPDGT 116


>sp|PURO_HALS3|IMP cyclohydrolase|Halobacterium salinarum (strain ATCC 29341

Query: 2 VLTPDGT 8
VL PDGT
Sbjct: 110 VLAPDGT 116


>sp|GLMS_METMA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanosarcina mazei (strain ATCC

Query: 2 VLTPDGTE 9
VLTPD E
Sbjct: 222 VLTPDSVE 229


>sp|PELO_IGNH4|PROTEIN pelota homolog|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 VLTPDGTEA 10
++ P GTEA
Sbjct: 318 IIVPKGTEA 326


>sp|SYT_HALWD|THREONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 TVLTPDGTE 9
TV PDG+E
Sbjct: 5 TVTLPDGSE 13


>sp|NNRD_NATMM|ADP-DEPENDENT (S)-NAD(P)H-hydrate dehydratase|Natrialba magadii (strain ATCC

Query: 2 VLTPDGTE 9
VLTP G+E
Sbjct: 141 VLTPSGSE 148


>sp|SUCC2_ARCFU|SUCCINATE--COA ligase [ADP-forming] subunit beta|Archaeoglobus fulgidus (strain

Query: 2 VLTPDGTEA 10
V+TPDG A
Sbjct: 194 VVTPDGLVA 202


>sp|GGR2_METBU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanococcoides burtonii (strain DSM 6242

Query: 2 VLTPDGT 8
+++PDGT
Sbjct: 74 IISPDGT 80


>sp|ATGT_PYRAB|TRNA-GUANINE(15) transglycosylase|Pyrococcus abyssi (strain GE5 /

Query: 3 LTPDGTE 9
LTP+GT+
Sbjct: 263 LTPEGTK 269


>sp|TOP6B_METBU|TYPE 2 DNA topoisomerase 6|Methanococcoides burtonii (strain DSM 6242

Query: 1 TVLTPDGTE 9
T++ PDG E
Sbjct: 209 TLIEPDGNE 217


>sp|GGR_METPE|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 TVLTPDGT 8
T++ PDGT
Sbjct: 73 TIVGPDGT 80


>sp|PSB1_NITMS|PROTEASOME subunit beta 1|Nitrosopumilus maritimus (strain SCM1)

Query: 2 VLTPDGTE 9
V+T DGTE
Sbjct: 184 VITKDGTE 191


>sp|SYT_METPE|THREONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 VLTPDG 7
V+TPDG
Sbjct: 157 VMTPDG 162


>sp|HEM3_HALSA|PROBABLE porphobilinogen deaminase|Halobacterium salinarum (strain ATCC

Query: 2 VLTPDGTE 9
++TPDGT+
Sbjct: 106 LVTPDGTD 113


>sp|ATGT_THEON|TRNA-GUANINE(15) transglycosylase|Thermococcus onnurineus (strain NA1)

Query: 3 LTPDGTE 9
LTP+GT+
Sbjct: 259 LTPEGTK 265


>sp|TOP6B_METAC|TYPE 2 DNA topoisomerase 6|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TVLTPDGTE 9
T++ PDG E
Sbjct: 209 TLIDPDGNE 217


>sp|MCH_HALHT|MESACONYL-COA hydratase|Haloarcula hispanica (strain ATCC 33960

Query: 1 TVLTPDG 7
T+L+PDG
Sbjct: 199 TLLSPDG 205


>sp|SYT_METB6|THREONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 VLTPDG 7
V+TPDG
Sbjct: 160 VMTPDG 165


>sp|TOP6B_METBF|TYPE 2 DNA topoisomerase 6|Methanosarcina barkeri (strain Fusaro /

Query: 1 TVLTPDGTE 9
T++ PDG E
Sbjct: 209 TLIEPDGNE 217


>sp|NNRD_HALTV|ADP-DEPENDENT (S)-NAD(P)H-hydrate dehydratase|Haloterrigena turkmenica (strain

Query: 2 VLTPDGTE 9
VLTP G E
Sbjct: 140 VLTPSGAE 147




332|Sequence|1656|1665|DGTEAEADVI

>sp|SYE_CALMQ|GLUTAMATE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 GTEAEADVI 10
G EAEAD I
Sbjct: 499 GNEAEADFI 507


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DGTEAEADVI 10
DG EA DVI
Sbjct: 311 DGLEARGDVI 320


>sp|HMC1_METBA|CHROMOSOMAL protein MC1|Methanosarcina barkeri

Query: 1 DGTEAEADVI 10
DGT++ DVI
Sbjct: 36 DGTKSNPDVI 45


>sp|HEM3_METMA|PROBABLE porphobilinogen deaminase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DGTEAEADV 9
+GTEAEA V
Sbjct: 200 EGTEAEAAV 208


>sp|FTR_METBU|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DGTEAEADV 9
DGTE+E +V
Sbjct: 126 DGTESETEV 134


>sp|SYS2_METTH|TYPE-2 serine--tRNA ligase|Methanothermobacter thermautotrophicus

Query: 3 TEAEADVI 10
TEAE+D++
Sbjct: 27 TEAESDIL 34




333|Sequence|1661|1670|EADVIENEDG

>sp|MPTA_THEKO|GTP cyclohydrolase MptA|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EADVIENEDG 10
E VI+NEDG
Sbjct: 132 EVGVIKNEDG 141


>sp|AATE_METBF|A-TYPE ATP synthase subunit E|Methanosarcina barkeri (strain Fusaro /

Query: 4 VIENEDG 10
V+ENEDG
Sbjct: 148 VLENEDG 154


>sp|AATE_METAC|A-TYPE ATP synthase subunit E|Methanosarcina acetivorans (strain ATCC

Query: 4 VIENEDG 10
V+ENEDG
Sbjct: 148 VLENEDG 154


>sp|MTRA1_METRM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 1|Methanobrevibacter ruminantium

Query: 3 DVIENEDG 10
D+I+NEDG
Sbjct: 134 DLIDNEDG 141


>sp|AROA_METLZ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanocorpusculum labreanum (strain ATCC

Query: 2 ADVIENEDG 10
AD+ E EDG
Sbjct: 348 ADISETEDG 356


>sp|MPTN_METJA|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ADVIENEDG 10
D+IE+EDG
Sbjct: 246 VDLIESEDG 254


>sp|MTRA2_METRM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 2|Methanobrevibacter ruminantium

Query: 3 DVIENEDG 10
D+I+NEDG
Sbjct: 134 DMIDNEDG 141


>sp|PYRB_AERPE|ASPARTATE carbamoyltransferase catalytic subunit|Aeropyrum pernix (strain

Query: 1 EADVIENEDG 10
+ADVIE++ G
Sbjct: 28 QADVIESKAG 37


>sp|Y589_METJA|UNCHARACTERIZED protein MJ0589|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VIENEDG 10
++ENEDG
Sbjct: 90 IVENEDG 96


>sp|FAU1_METKA|PROBABLE ribonuclease FAU-1|Methanopyrus kandleri (strain AV19 /

Query: 1 EADVIENEDG 10
E DV+E E+G
Sbjct: 421 EVDVVEPEEG 430


>sp|CS3HE_THETK|CRISPR-ASSOCIATED helicase Cas3|Thermoproteus tenax (strain ATCC 35583

Query: 2 ADVIENEDG 10
A+VIE DG
Sbjct: 40 AEVIERSDG 48


>sp|G3PP_PYRAB|GLYCERALDEHYDE 3-phosphate phosphatase|Pyrococcus abyssi (strain GE5 /

Query: 4 VIENEDG 10
VIENE+G
Sbjct: 223 VIENENG 229




334|Sequence|1666|1675|ENEDGTYDIF

>sp|SYP_METST|PROLINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 ENEDGTYD 8
ENEDGT+D
Sbjct: 236 ENEDGTHD 243


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 5 GTYDIF 10
GTYDIF
Sbjct: 29 GTYDIF 34


>sp|TOP6B_METBF|TYPE 2 DNA topoisomerase 6|Methanosarcina barkeri (strain Fusaro /

Query: 2 NEDGTYDI 9
NEDGT D+
Sbjct: 521 NEDGTADV 528


>sp|HIS6_METBU|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcoides burtonii

Query: 2 NEDGTYDIF 10
N DGTYD F
Sbjct: 196 NRDGTYDGF 204


>sp|Y1393_METJA|UNCHARACTERIZED protein MJ1393|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EDGTYDIF 10
DGTYDI+
Sbjct: 448 ADGTYDIY 455


>sp|Y1394_METJA|UNCHARACTERIZED protein MJ1394|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DGTYDIF 10
DGTYDI+
Sbjct: 824 DGTYDIY 830


>sp|Y954_METVS|UNCHARACTERIZED solute-binding protein Mevan_0954|Methanococcus vannielii (strain

Query: 1 ENEDGTYDI 9
EN+DGTY I
Sbjct: 179 ENDDGTYLI 187


>sp|SYP_PYRAB|PROLINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 ENEDGTYD 8
E EDGT+D
Sbjct: 244 EKEDGTHD 251


>sp|SYP_PYRHO|PROLINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ENEDGTYD 8
E EDGT+D
Sbjct: 244 EKEDGTHD 251


>sp|SYP_PYRFU|PROLINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ENEDGTYD 8
E EDGT+D
Sbjct: 244 EKEDGTHD 251


>sp|AROA_THEAC|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 2 NEDGTYDI 9
NEDG YD+
Sbjct: 134 NEDGFYDV 141


>sp|Y090_METJA|UNCHARACTERIZED protease MJ0090|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ENEDGTYDI 9
E+ DGTY+I
Sbjct: 208 EHHDGTYEI 216


>sp|Y1652_METMP|UNCHARACTERIZED solute-binding protein MMP1652|Methanococcus maripaludis (strain

Query: 1 ENEDGTYDI 9
EN DGTY I
Sbjct: 181 ENADGTYCI 189


>sp|Y670_METJA|UNCHARACTERIZED protein MJ0670|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ENEDGTYDI 9
E EDGTY +
Sbjct: 45 ETEDGTYTL 53


>sp|ENCP1_PYRFU|FERRITIN-LIKE-ENCAPSULIN shell fusion protein|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ENEDGTYDI 9
E DGTYD+
Sbjct: 178 ELNDGTYDV 186


>sp|Y977_METKA|UNCHARACTERIZED glycosyltransferase MK0977|Methanopyrus kandleri (strain AV19 /

Query: 2 NEDGTYDIF 10
+EDG++D+
Sbjct: 45 SEDGSFDLL 53


>sp|Y925_METM7|UNCHARACTERIZED solute-binding protein MmarC7_0925|Methanococcus maripaludis

Query: 1 ENEDGTY 7
EN DGTY
Sbjct: 193 ENADGTY 199


>sp|PRIS_THEAC|DNA primase small subunit PriS|Thermoplasma acidophilum (strain ATCC

Query: 4 DGTYDIF 10
DG YD+F
Sbjct: 275 DGEYDVF 281


>sp|Y1756_METM5|UNCHARACTERIZED solute-binding protein MmarC5_1756|Methanococcus maripaludis

Query: 1 ENEDGTY 7
EN DGTY
Sbjct: 196 ENADGTY 202


>sp|THSG_SACSH|CHAPERONIN subunit gamma|Saccharolobus shibatae (strain ATCC 51178

Query: 1 ENEDGTYDI 9
+ DGTYD+
Sbjct: 181 DKRDGTYDL 189


>sp|FLAB3_METJA|FLAGELLIN B3|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NEDGTYDIF 10
N +GT DIF
Sbjct: 119 NTNGTRDIF 127


>sp|COBS_THEVO|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 NEDGTYDIF 10
N TYDIF
Sbjct: 242 NVASTYDIF 250


>sp|F16PA_METLZ|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 NEDGTY 7
NE+GTY
Sbjct: 184 NEEGTY 189


>sp|AATE_METBF|A-TYPE ATP synthase subunit E|Methanosarcina barkeri (strain Fusaro /

Query: 1 ENEDGT 6
ENEDGT
Sbjct: 150 ENEDGT 155


>sp|SYS_DESA1|SERINE--TRNA ligase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 ENEDGTYDI 9
+NEDGT +
Sbjct: 424 QNEDGTVTV 432


>sp|MPTA_THEKO|GTP cyclohydrolase MptA|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ENEDGTYD 8
+NEDG+++
Sbjct: 137 KNEDGSFE 144


>sp|DHE2_HALSI|NAD-SPECIFIC glutamate dehydrogenase A|Halobacterium salinarum (Halobacterium

Query: 1 ENEDGTYDIF 10
E +DGT ++F
Sbjct: 66 ERDDGTVEVF 75


>sp|AATE_METAC|A-TYPE ATP synthase subunit E|Methanosarcina acetivorans (strain ATCC

Query: 1 ENEDGT 6
ENEDGT
Sbjct: 150 ENEDGT 155


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 2 NEDGTYDIF 10
+E+G Y+IF
Sbjct: 351 DEEGRYEIF 359


>sp|SYI_METTP|ISOLEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 DGTYDIF 10
DGTY+I
Sbjct: 251 DGTYEIL 257


>sp|CPGS_METS3|CYCLIC 2,3-diphosphoglycerate synthetase|Methanobrevibacter smithii

Query: 1 ENEDGTYDIF 10
+NED YDI
Sbjct: 67 KNEDIPYDII 76


>sp|Y686_METJA|UNCHARACTERIZED protein MJ0686|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NEDGTYDI 9
NED ++DI
Sbjct: 151 NEDNSFDI 158


>sp|Y574_METTH|UNCHARACTERIZED protein MTH_574|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 EDGTYDI 9
EDG++DI
Sbjct: 155 EDGSWDI 161


>sp|GCSPB_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 2 NEDGTYDI 9
NE+GT D+
Sbjct: 193 NENGTVDL 200




335|Sequence|1671|1680|TYDIFYTAAK

>sp|ILVD_PYRCJ|DIHYDROXY-ACID dehydratase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 TYDIFYTAA 9
TYD Y AA
Sbjct: 255 TYDALYNAA 263


>sp|ILVD_PYRAR|DIHYDROXY-ACID dehydratase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 TYDIFYTAA 9
TYD Y AA
Sbjct: 255 TYDALYNAA 263


>sp|ILVD_PYRAE|DIHYDROXY-ACID dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 TYDIFYTAA 9
TYD Y AA
Sbjct: 255 TYDALYNAA 263


>sp|ILVD_PYRNV|DIHYDROXY-ACID dehydratase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 TYDIFYTAA 9
TYD Y AA
Sbjct: 255 TYDAIYNAA 263


>sp|ILVD_PYRIL|DIHYDROXY-ACID dehydratase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 TYDIFYTAA 9
TYD Y AA
Sbjct: 255 TYDAIYNAA 263


>sp|METK_PYRCJ|S-ADENOSYLMETHIONINE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 YDIFY 6
YDIFY
Sbjct: 265 YDIFY 269


>sp|Y3510_METJA|UNCHARACTERIZED protein MJECL10|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YDIFYTAAK 10
YD+FY +K
Sbjct: 85 YDLFYKNSK 93


>sp|ILVD_AERPE|DIHYDROXY-ACID dehydratase|Aeropyrum pernix (strain ATCC 700893

Query: 1 TYDIFYTA 8
TY+ FY A
Sbjct: 253 TYEAFYNA 260


>sp|DNLI_PYRNV|DNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 DIFYTAAK 10
D+FYT K
Sbjct: 466 DMFYTVCK 473


>sp|SYE_THEVO|GLUTAMATE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 YDIFYTAAK 10
+D++Y+ AK
Sbjct: 171 FDLYYSVAK 179


>sp|DNLI_PYRAR|DNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 DIFYTAAK 10
D+FYT K
Sbjct: 466 DMFYTVCK 473


>sp|DNLI_PYRIL|DNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 DIFYTAAK 10
D+FYT K
Sbjct: 466 DMFYTVCK 473


>sp|DNLI_PYRCJ|DNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 DIFYTAAK 10
D+FYT K
Sbjct: 466 DMFYTVCK 473


>sp|DNLI_PYRAE|DNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 DIFYTAAK 10
D+FYT K
Sbjct: 466 DMFYTVCK 473




336|Sequence|1676|1685|YTAAKPGTYV

>sp|Y823_METJA|UNCHARACTERIZED ATP-binding protein MJ0823|Methanocaldococcus jannaschii (strain

Query: 2 TAAKPGTY 9
T AKPGTY
Sbjct: 66 TGAKPGTY 73


>sp|RRP4_METBU|EXOSOME complex component Rrp4|Methanococcoides burtonii (strain DSM 6242

Query: 4 AKPGTYV 10
A PGTYV
Sbjct: 19 AGPGTYV 25


>sp|THI4_AERPE|THIAMINE thiazole synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 YTAAKPGTY 9
Y A KPG Y
Sbjct: 94 YEAVKPGLY 102


>sp|GMHA_THEVO|PROBABLE phosphoheptose isomerase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 AKPGTYV 10
AKPG YV
Sbjct: 116 AKPGDYV 122


>sp|PYRE_PYRIL|OROTATE phosphoribosyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 YTAAKPGTYV 10
YT KP +YV
Sbjct: 75 YTLGKPISYV 84


>sp|HPS_METBF|3-HEXULOSE-6-PHOSPHATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 AAKPGTYV 10
A KPG Y+
Sbjct: 352 AVKPGDYI 359


>sp|PTH_THEAC|PEPTIDYL-TRNA hydrolase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YTAAKPGT 8
YT +PGT
Sbjct: 86 YTQVEPGT 93


>sp|ACSA_METTP|ACETYL-COENZYME A synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 YTAAKPGTYV 10
Y KPGTY+
Sbjct: 504 YWDIKPGTYL 513


>sp|Y912_ARCFU|UNCHARACTERIZED protein AF_0912|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 AAKPGTYV 10
A KPG Y+
Sbjct: 193 AVKPGKYI 200


>sp|KHSE_METM7|HOMOSERINE kinase|Methanococcus maripaludis (strain C7 /

Query: 1 YTAAKPGTYV 10
YT PG YV
Sbjct: 288 YTKVGPGCYV 297


>sp|KHSE_METM5|HOMOSERINE kinase|Methanococcus maripaludis (strain C5 /

Query: 1 YTAAKPGTYV 10
YT PG YV
Sbjct: 288 YTKVGPGCYV 297


>sp|Y2121_ARCFU|UNCHARACTERIZED protein AF_2121|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 AAKPGTYV 10
AAK GTY+
Sbjct: 94 AAKNGTYI 101


>sp|KHSE_METMP|HOMOSERINE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 YTAAKPGTYV 10
YT PG YV
Sbjct: 288 YTKVGPGCYV 297


>sp|GLCDH_HALSA|GLUCOSE 1-dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 4 AKPGTYV 10
A PGTYV
Sbjct: 106 AAPGTYV 112


>sp|PTH_THEVO|PEPTIDYL-TRNA hydrolase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YTAAKPGT 8
YT +PGT
Sbjct: 86 YTQVEPGT 93




337|Sequence|1681|1690|PGTYVIYVRF

>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PGTYVIYVR 9
PG+ VIY+R
Sbjct: 307 PGSSVIYIR 315


>sp|RL24E_THEAC|LARGE ribosomal subunit protein eL24|Thermoplasma acidophilum (strain

Query: 1 PGTYVIYVR 9
PGT ++YVR
Sbjct: 16 PGTGIMYVR 24


>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PGTYVIYVR 9
PG+ VIY+R
Sbjct: 295 PGSSVIYLR 303


>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PGTYVIYVR 9
PG+ VIY+R
Sbjct: 293 PGSSVIYLR 301


>sp|RL24E_SULAC|LARGE ribosomal subunit protein eL24|Sulfolobus acidocaldarius (strain

Query: 1 PGTYVIYVR 9
PGT ++YVR
Sbjct: 16 PGTGLMYVR 24


>sp|RL24E_THEVO|LARGE ribosomal subunit protein eL24|Thermoplasma volcanium (strain

Query: 1 PGTYVIYVR 9
PGT ++YVR
Sbjct: 15 PGTGIMYVR 23


>sp|Y946_ARCFU|UNCHARACTERIZED protein AF_0946|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GTYVIYVR 9
GTY +YVR
Sbjct: 913 GTYKVYVR 920


>sp|NEP1_PYRIL|RIBOSOMAL RNA small subunit methyltransferase|Pyrobaculum islandicum

Query: 2 GTYVIYVRF 10
G Y IYVR+
Sbjct: 89 GDYTIYVRW 97


>sp|Y912_ARCFU|UNCHARACTERIZED protein AF_0912|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GTYVIYVR 9
G Y IYVR
Sbjct: 292 GKYAIYVR 299


>sp|SPT4_THEKO|TRANSCRIPTION elongation factor Spt4|Thermococcus kodakarensis (strain ATCC

Query: 1 PGTYVIYVR 9
PG Y I VR
Sbjct: 59 PGKYAIRVR 67


>sp|SPT4_PYRFU|TRANSCRIPTION elongation factor Spt4|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PGTYVIYVR 9
PG Y I VR
Sbjct: 53 PGKYAIRVR 61


>sp|TRUD_NANEQ|PROBABLE tRNA pseudouridine synthase D|Nanoarchaeum equitans (strain

Query: 1 PGTYVIYV 8
PG Y IYV
Sbjct: 41 PGDYTIYV 48


>sp|RL24E_SACI4|LARGE ribosomal subunit protein eL24|Saccharolobus islandicus (strain

Query: 1 PGTYVIYVR 9
PGT ++YVR
Sbjct: 16 PGTGLMYVR 24


>sp|RL24E_SACI3|LARGE ribosomal subunit protein eL24|Saccharolobus islandicus (strain

Query: 1 PGTYVIYVR 9
PGT ++YVR
Sbjct: 16 PGTGLMYVR 24


>sp|RL24E_SACS2|LARGE ribosomal subunit protein eL24|Saccharolobus solfataricus (strain

Query: 1 PGTYVIYVR 9
PGT ++YVR
Sbjct: 16 PGTGLMYVR 24


>sp|RL24E_SACI7|LARGE ribosomal subunit protein eL24|Saccharolobus islandicus (strain

Query: 1 PGTYVIYVR 9
PGT ++YVR
Sbjct: 16 PGTGLMYVR 24


>sp|RL24E_SACI6|LARGE ribosomal subunit protein eL24|Saccharolobus islandicus (strain

Query: 1 PGTYVIYVR 9
PGT ++YVR
Sbjct: 16 PGTGLMYVR 24


>sp|RL24E_SACI2|LARGE ribosomal subunit protein eL24|Saccharolobus islandicus (strain

Query: 1 PGTYVIYVR 9
PGT ++YVR
Sbjct: 16 PGTGLMYVR 24


>sp|RL24E_SACI1|LARGE ribosomal subunit protein eL24|Saccharolobus islandicus (strain

Query: 1 PGTYVIYVR 9
PGT ++YVR
Sbjct: 16 PGTGLMYVR 24


>sp|QUEE_HYPBU|7-CARBOXY-7-DEAZAGUANINE synthase|Hyperthermus butylicus (strain DSM 5456

Query: 2 GTYVIYVRF 10
GTY ++VR
Sbjct: 33 GTYSVFVRL 41


>sp|BRIX_METJA|PROBABLE Brix domain-containing ribosomal biogenesis|Methanocaldococcus

Query: 1 PGTYVIY 7
PGT V+Y
Sbjct: 56 PGTLVVY 62


>sp|RL24E_STAMF|LARGE ribosomal subunit protein eL24|Staphylothermus marinus (strain

Query: 1 PGTYVIYVR 9
PGT ++YV+
Sbjct: 16 PGTGIMYVK 24


>sp|DPCKG_METJA|GTP-DEPENDENT dephospho-CoA kinase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GTYVIY 7
GTYV+Y
Sbjct: 123 GTYVLY 128


>sp|RL24E_THESM|LARGE ribosomal subunit protein eL24|Thermococcus sibiricus (strain DSM

Query: 1 PGTYVIYVR 9
PGT +YVR
Sbjct: 16 PGTGKMYVR 24


>sp|RL10E_PYRCJ|LARGE ribosomal subunit protein uL16|Pyrobaculum calidifontis (strain DSM

Query: 1 PGTYVIYVRF 10
PG + YV F
Sbjct: 132 PGQVIFYVEF 141


>sp|RL24E_ARCFU|LARGE ribosomal subunit protein eL24|Archaeoglobus fulgidus (strain

Query: 1 PGTYVIYVR 9
PGT +YVR
Sbjct: 15 PGTGKMYVR 23


>sp|SYFB_METJA|PHENYLALANINE--TRNA ligase beta subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PGTYVIYVR 9
PGT + Y+R
Sbjct: 297 PGTIINYLR 305


>sp|RL24E_HYPBU|LARGE ribosomal subunit protein eL24|Hyperthermus butylicus (strain DSM

Query: 1 PGTYVIYVR 9
PGT ++YV+
Sbjct: 16 PGTGLMYVK 24


>sp|FLPA_THESM|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus sibiricus (strain

Query: 1 PGTYVIYV 8
PGT V+Y+
Sbjct: 72 PGTTVLYL 79




338|Sequence|1686|1695|IYVRFGGVDI

>sp|QUEE_THEKO|7-CARBOXY-7-DEAZAGUANINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IYVRFGGVDI 10
I+VRF G D+
Sbjct: 29 IFVRFAGCDL 38


>sp|ATGT_THEON|TRNA-GUANINE(15) transglycosylase|Thermococcus onnurineus (strain NA1)

Query: 3 VRFGGVDI 10
+R+GGVD+
Sbjct: 98 MRYGGVDV 105


>sp|FPOD_METMA|F(420)H(2) dehydrogenase subunit D|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 YVRFGGV 8
Y+RFGGV
Sbjct: 156 YLRFGGV 162


>sp|SYV_PICTO|VALINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 IYVRFGGVDI 10
+Y+ F G++I
Sbjct: 189 VYINFSGIEI 198


>sp|SUCC1_ARCFU|SUCCINATE--COA ligase [ADP-forming] subunit beta|Archaeoglobus fulgidus (strain

Query: 1 IYVRFGGVDI 10
I+ R GG+D+
Sbjct: 116 IFSRMGGMDV 125


>sp|QUEE_METTH|7-CARBOXY-7-DEAZAGUANINE synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 IYVRFGGVDI 10
I+VRF G ++
Sbjct: 27 IFVRFAGCNL 36


>sp|FTTA_PYRHO|TRANSCRIPTION termination factor FttA|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YVRFGGVDI 10
Y R GG+++
Sbjct: 446 YARIGGIEV 454


>sp|RS3_ARCFU|SMALL ribosomal subunit protein uS3|Archaeoglobus fulgidus (strain ATCC

Query: 5 FGGVDI 10
FGGVDI
Sbjct: 30 FGGVDI 35


>sp|PURE_ARCFU|PHOSPHORIBOSYLAMINOIMIDAZOLE carboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 RFGGVDI 10
+FGG DI
Sbjct: 115 KFGGADI 121


>sp|SYR_PYRAB|ARGININE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 4 RFGGVDI 10
+FGG DI
Sbjct: 372 KFGGADI 378


>sp|RNH2_NANEQ|RIBONUCLEASE HII|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 VRFGGVD 9
+R+GGVD
Sbjct: 1 MRYGGVD 7


>sp|COFH_METVS|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus vannielii (strain ATCC

Query: 4 RFGGVDI 10
++GG+DI
Sbjct: 128 KYGGIDI 134


>sp|RNZ_ARCFU|RIBONUCLEASE Z|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IYVRFGG 7
I+V+FGG
Sbjct: 24 IFVQFGG 30


>sp|TRMY_ARCFU|TRNA (pseudouridine(54)-N(1))-methyltransferase|Archaeoglobus fulgidus

Query: 1 IYVRFGGVDI 10
IY++ GVDI
Sbjct: 219 IYLKEDGVDI 228


>sp|ATGT_THEKO|TRNA-GUANINE(15) transglycosylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 VRFGGVDI 10
+R+GGV++
Sbjct: 98 MRYGGVEV 105


>sp|Y1428_METJA|TPR repeat-containing protein MJ1428|Methanocaldococcus jannaschii

Query: 1 IYVRFGGVD 9
IY+ FG +D
Sbjct: 159 IYLLFGDID 167


>sp|FTTA_THEKO|TRANSCRIPTION termination factor FttA|Thermococcus kodakarensis (strain ATCC

Query: 2 YVRFGGVDI 10
Y R GG+++
Sbjct: 443 YARVGGIEV 451


>sp|Y365_METJA|UNCHARACTERIZED protein MJ0365|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YVRFGGVDI 10
Y RF G+D+
Sbjct: 113 YCRFLGIDV 121


>sp|Y995_METJA|UNCHARACTERIZED protein MJ0995|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IYVRFGGVDI 10
+Y+ F G+D+
Sbjct: 210 VYLEFNGIDL 219


>sp|Y148_PYRAR|UPF0215 protein Pars_0148|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 IYVRFGGVD 9
IYVR G+D
Sbjct: 134 IYVRSWGID 142


>sp|RL2_THEON|LARGE ribosomal subunit protein uL2|Thermococcus onnurineus (strain NA1)

Query: 2 YVRFGGV 8
YVR GGV
Sbjct: 121 YVRAGGV 127




339|Sequence|1691|1700|GGVDIPNSPF

>sp|RTCA_SULTO|RNA 3'-terminal phosphate cyclase|Sulfurisphaera tokodaii (strain DSM

Query: 1 GGVDIPNSP 9
GG D+P SP
Sbjct: 118 GGTDVPKSP 126


>sp|RTCA_SULAC|RNA 3'-terminal phosphate cyclase|Sulfolobus acidocaldarius (strain

Query: 1 GGVDIPNSP 9
GG D+P SP
Sbjct: 118 GGTDVPKSP 126


>sp|RTCA_SACS2|RNA 3'-terminal phosphate cyclase|Saccharolobus solfataricus (strain

Query: 1 GGVDIPNSP 9
GG D+P SP
Sbjct: 118 GGTDVPKSP 126


>sp|RL18_KORCO|LARGE ribosomal subunit protein uL18|Korarchaeum cryptofilum (strain

Query: 1 GGVDIPNSP 9
G+D+P+SP
Sbjct: 126 AGIDVPHSP 134


>sp|RTCA_SACI6|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 1 GGVDIPNSP 9
GG D+P SP
Sbjct: 118 GGTDVPKSP 126


>sp|RTCA_SACI4|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 1 GGVDIPNSP 9
GG D+P SP
Sbjct: 118 GGTDVPKSP 126


>sp|RTCA_SACI3|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 1 GGVDIPNSP 9
GG D+P SP
Sbjct: 118 GGTDVPKSP 126


>sp|RTCA_SACI1|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 1 GGVDIPNSP 9
GG D+P SP
Sbjct: 118 GGTDVPKSP 126


>sp|RTCA_SACI7|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 1 GGVDIPNSP 9
GG D+P SP
Sbjct: 118 GGTDVPKSP 126


>sp|RTCA_SACI2|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 1 GGVDIPNSP 9
GG D+P SP
Sbjct: 118 GGTDVPKSP 126


>sp|RL18_METTP|LARGE ribosomal subunit protein uL18|Methanothrix thermoacetophila

Query: 1 GGVDIPNSP 9
GVD+P+SP
Sbjct: 126 AGVDVPHSP 134


>sp|RTCA_IGNH4|RNA 3'-terminal phosphate cyclase|Ignicoccus hospitalis (strain KIN4/I

Query: 1 GGVDIPNSP 9
GG D+P SP
Sbjct: 119 GGTDVPMSP 127


>sp|TOP6A_NATPD|TYPE 2 DNA topoisomerase 6|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GGVDIPNSP 9
GG IPN+P
Sbjct: 176 GGYQIPNNP 184


>sp|DAPB_META3|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GGVDIPNSP 9
G +D+PN P
Sbjct: 32 GAIDVPNHP 40


>sp|TOP6A_HALSA|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 700922

Query: 1 GGVDIPNSP 9
GG IPN+P
Sbjct: 174 GGYQIPNNP 182


>sp|TOP6A_HALS3|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 29341

Query: 1 GGVDIPNSP 9
GG IPN+P
Sbjct: 174 GGYQIPNNP 182


>sp|DAPB_METST|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 GVDIPNSPF 10
G+++PNSP
Sbjct: 32 GIEMPNSPL 40


>sp|TOP6A_HALMA|TYPE 2 DNA topoisomerase 6|Haloarcula marismortui (strain ATCC 43049

Query: 1 GGVDIPNSP 9
GG IPN+P
Sbjct: 176 GGYQIPNNP 184


>sp|Y1361_METJA|UNCHARACTERIZED protein MJ1361|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GGVDIPNSP 9
GGVD+ N P
Sbjct: 124 GGVDLTNVP 132


>sp|RTCA_METS5|RNA 3'-terminal phosphate cyclase|Metallosphaera sedula (strain ATCC

Query: 1 GGVDIPNSP 9
GG D+P SP
Sbjct: 117 GGTDVPLSP 125


>sp|ATGT_METS3|TRNA-GUANINE(15) transglycosylase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 VDIPNSPF 10
+DIP +PF
Sbjct: 118 LDIPTAPF 125


>sp|DAPB_METMP|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GGVDIPNSP 9
+DIPN P
Sbjct: 31 AAIDIPNHP 39


>sp|DAPB_METM7|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus maripaludis (strain C7 /

Query: 1 GGVDIPNSP 9
+DIPN P
Sbjct: 31 AAIDIPNHP 39


>sp|DAPB_METM6|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus maripaludis (strain C6 /

Query: 1 GGVDIPNSP 9
+DIPN P
Sbjct: 31 AAIDIPNHP 39


>sp|DAPB_METM5|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus maripaludis (strain C5 /

Query: 1 GGVDIPNSP 9
+DIPN P
Sbjct: 31 AAIDIPNHP 39


>sp|DAPB_METVS|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GGVDIPNSP 9
+DIPN P
Sbjct: 31 AAIDIPNHP 39


>sp|RTCA_PYRAB|RNA 3'-terminal phosphate cyclase|Pyrococcus abyssi (strain GE5 /

Query: 1 GGVDIPNSP 9
GG D+P SP
Sbjct: 119 GGTDVPWSP 127


>sp|DAPB_METS3|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 GGVDIPNSPF 10
++IPNSP
Sbjct: 31 AAIEIPNSPL 40


>sp|SUCC_PYRAE|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum aerophilum (strain

Query: 1 GGVDIPNSP 9
GG+ + NSP
Sbjct: 57 GGIKVANSP 65


>sp|RTCA_HYPBU|RNA 3'-terminal phosphate cyclase|Hyperthermus butylicus (strain DSM

Query: 1 GGVDIPNSP 9
GG D+P SP
Sbjct: 119 GGTDVPWSP 127


>sp|RTCA_THEKO|RNA 3'-terminal phosphate cyclase|Thermococcus kodakarensis (strain

Query: 1 GGVDIPNSP 9
GG D+P SP
Sbjct: 119 GGTDVPWSP 127


>sp|RTCA_THEGJ|RNA 3'-terminal phosphate cyclase|Thermococcus gammatolerans (strain

Query: 1 GGVDIPNSP 9
GG D+P SP
Sbjct: 119 GGTDVPWSP 127


>sp|RTCA_THEON|RNA 3'-terminal phosphate cyclase|Thermococcus onnurineus (strain NA1)

Query: 1 GGVDIPNSP 9
GG D+P SP
Sbjct: 119 GGTDVPWSP 127


>sp|COOS_METJA|CARBON monoxide dehydrogenase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GVDIPNSP 9
GVDIP+ P
Sbjct: 534 GVDIPDLP 541


>sp|PYRI_METPE|ASPARTATE carbamoyltransferase regulatory chain|Methanosphaerula palustris

Query: 2 GVDIPN 7
GVDIPN
Sbjct: 100 GVDIPN 105


>sp|RTCA_CALMQ|RNA 3'-terminal phosphate cyclase|Caldivirga maquilingensis (strain

Query: 1 GGVDIPNSP 9
GG D+P +P
Sbjct: 120 GGTDVPKAP 128


>sp|SYDND_METST|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 VDIPNSPF 10
+DIP PF
Sbjct: 279 LDIPTEPF 286


>sp|SPH1_HALSI|SMC-LIKE protein Sph1|Halobacterium salinarum (Halobacterium halobium)

Query: 3 VDIPNSP 9
+DIP+SP
Sbjct: 251 LDIPDSP 257


>sp|SPH1_HALSA|SMC-LIKE protein Sph1|Halobacterium salinarum (strain ATCC 700922

Query: 3 VDIPNSP 9
+DIP+SP
Sbjct: 251 LDIPDSP 257


>sp|SPH1_HALS3|SMC-LIKE protein Sph1|Halobacterium salinarum (strain ATCC 29341

Query: 3 VDIPNSP 9
+DIP+SP
Sbjct: 251 LDIPDSP 257


>sp|RTCA_STAMF|RNA 3'-terminal phosphate cyclase|Staphylothermus marinus (strain ATCC

Query: 1 GGVDIPNSP 9
GG D+P SP
Sbjct: 121 GGTDVPWSP 129


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 6 PNSPF 10
PNSPF
Sbjct: 49 PNSPF 53


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 6 PNSPF 10
PNSPF
Sbjct: 38 PNSPF 42


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 6 PNSPF 10
PNSPF
Sbjct: 37 PNSPF 41


>sp|PYRG_METMJ|CTP synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 DIPNSPF 10
+IPN PF
Sbjct: 485 EIPNHPF 491


>sp|PCNA_PYRFU|DNA polymerase sliding clamp|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VDIPNSPF 10
VD+P PF
Sbjct: 123 VDLPELPF 130


>sp|PCNA_PYRAB|DNA polymerase sliding clamp|Pyrococcus abyssi (strain GE5 /

Query: 3 VDIPNSPF 10
VD+P PF
Sbjct: 123 VDLPELPF 130


>sp|RTCA_KORCO|RNA 3'-terminal phosphate cyclase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 GGVDIPNSP 9
GG D+P +P
Sbjct: 121 GGTDVPLAP 129


>sp|RTCA_AERPE|RNA 3'-terminal phosphate cyclase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GGVDIPNSP 9
GG D+P +P
Sbjct: 124 GGTDVPMAP 132


>sp|MPTN_METAC|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GGVDIPNSP 9
GGV + NSP
Sbjct: 92 GGVTVMNSP 100


>sp|AATA_METTH|A-TYPE ATP synthase subunit A|Methanothermobacter thermautotrophicus

Query: 2 GVDIPNSP 9
GVD+P+ P
Sbjct: 106 GVDVPSLP 113


>sp|Y520_METJA|PUTATIVE NADH-ubiquinone oxidoreductase MJ0520|Methanocaldococcus jannaschii

Query: 6 PNSPF 10
PNSPF
Sbjct: 187 PNSPF 191


>sp|RS7_METLZ|SMALL ribosomal subunit protein uS7|Methanocorpusculum labreanum (strain

Query: 1 GGVDIPNS 8
GG+++P S
Sbjct: 121 GGINVPKS 128


>sp|RS7_METHJ|SMALL ribosomal subunit protein uS7|Methanospirillum hungatei JF-1

Query: 1 GGVDIPNS 8
GG+++P S
Sbjct: 121 GGINVPKS 128


>sp|RS7_METB6|SMALL ribosomal subunit protein uS7|Methanoregula boonei (strain DSM

Query: 1 GGVDIPNS 8
GG+++P S
Sbjct: 131 GGINVPKS 138


>sp|COOS2_METMA|CARBON monoxide dehydrogenase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GGVDIPNSP 9
GGV +P+ P
Sbjct: 543 GGVPVPDLP 551


>sp|RL18_PYRHO|LARGE ribosomal subunit protein uL18|Pyrococcus horikoshii (strain ATCC

Query: 1 GGVDIPNSP 9
G+++P+SP
Sbjct: 127 AGLNVPHSP 135


>sp|RL18_PYRAB|LARGE ribosomal subunit protein uL18|Pyrococcus abyssi (strain GE5 /

Query: 1 GGVDIPNSP 9
G+++P+SP
Sbjct: 127 AGLNVPHSP 135


>sp|RL18_PYRFU|LARGE ribosomal subunit protein uL18|Pyrococcus furiosus (strain ATCC

Query: 1 GGVDIPNSP 9
G+++P+SP
Sbjct: 127 AGLNVPHSP 135


>sp|LADH_META3|LACTALDEHYDE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GGVDIPNSP 9
GGV I NSP
Sbjct: 417 GGVLINNSP 425


>sp|RTCA_DESA1|RNA 3'-terminal phosphate cyclase|Desulfurococcus amylolyticus (strain

Query: 1 GGVDIPNSP 9
GG ++P SP
Sbjct: 121 GGTNVPWSP 129


>sp|SYFB_HALMA|PHENYLALANINE--TRNA ligase beta subunit|Haloarcula marismortui (strain ATCC 43049

Query: 2 GVDIPNS 8
GV+IPN+
Sbjct: 75 GVEIPNT 81


>sp|RL18_ARCFU|LARGE ribosomal subunit protein uL18|Archaeoglobus fulgidus (strain ATCC

Query: 1 GGVDIPNS 8
GG+++P+S
Sbjct: 128 GGLEVPHS 135




340|Sequence|1696|1705|PNSPFTVMAT

>sp|EF2_METB6|ELONGATION factor 2|Methanoregula boonei (strain DSM 21154

Query: 1 PNSPFTVMAT 10
PN P T+M T
Sbjct: 288 PNGPATMMVT 297


>sp|TRPD_METMA|ANTHRANILATE phosphoribosyltransferase|Methanosarcina mazei (strain ATCC

Query: 1 PNSPFTVMAT 10
PN+PF ++ T
Sbjct: 71 PNTPFRIVDT 80


>sp|PRNK_THEKO|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase TK1956|Thermococcus kodakarensis (strain ATCC

Query: 2 NSPFTVM 8
N PFT+M
Sbjct: 25 NKPFTLM 31


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PNSPF 5
PNSPF
Sbjct: 38 PNSPF 42


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PNSPF 5
PNSPF
Sbjct: 37 PNSPF 41


>sp|Y520_METJA|PUTATIVE NADH-ubiquinone oxidoreductase MJ0520|Methanocaldococcus jannaschii

Query: 1 PNSPFTVM 8
PNSPF ++
Sbjct: 187 PNSPFGIV 194


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 PNSPF 5
PNSPF
Sbjct: 49 PNSPF 53




341|Sequence|1701|1710|TVMATDGEVT

>sp|GATE_NATPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Natronomonas pharaonis (strain ATCC

Query: 1 TVMATDGEV 9
T++ATDGE+
Sbjct: 136 TLLATDGEI 144


>sp|Y934_PYRNV|UPF0282 protein Tneu_0934|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 MATDGEV 9
MATDGE+
Sbjct: 88 MATDGEM 94


>sp|Y021_PYRIL|UPF0282 protein Pisl_0021|Pyrobaculum islandicum (strain DSM 4184

Query: 3 MATDGEV 9
MATDGE+
Sbjct: 88 MATDGEM 94


>sp|Y3680_PYRAE|UPF0282 protein PAE3680|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 MATDGE 8
MATDGE
Sbjct: 88 MATDGE 93


>sp|Y1056_PYRAR|UPF0282 protein Pars_1056|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 MATDGE 8
MATDGE
Sbjct: 88 MATDGE 93


>sp|HMPTM_METJA|7,8-DIHYDRO-6-HYDROXYMETHYLPTERIN dimethyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 5 TDGEVT 10
TDGE+T
Sbjct: 299 TDGEIT 304


>sp|K1PF_HALVD|1-PHOSPHOFRUCTOKINASE volcanii (strain ATCC 29605

Query: 1 TVMATDGE 8
TV+A DGE
Sbjct: 93 TVLAADGE 100


>sp|IF1A_AERPE|TRANSLATION initiation factor 1A|Aeropyrum pernix (strain ATCC 700893

Query: 2 VMATDGEV 9
V+ TDGEV
Sbjct: 39 VLCTDGEV 46


>sp|PSTB_METKA|PHOSPHATE import ATP-binding protein PstB|Methanopyrus kandleri (strain AV19

Query: 1 TVMATDGEVT 10
TVM GEVT
Sbjct: 190 TVMELKGEVT 199


>sp|PCNA_METAR|DNA polymerase sliding clamp|Methanocella arvoryzae (strain DSM 22066

Query: 1 TVMATDGEV 9
T ATDGE+
Sbjct: 58 TFEATDGEI 66


>sp|GATE_PYRAB|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus abyssi (strain GE5 /

Query: 2 VMATDGEV 9
++ATDG+V
Sbjct: 140 IIATDGKV 147


>sp|GATE_PYRHO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus horikoshii (strain ATCC

Query: 2 VMATDGEV 9
++ATDG+V
Sbjct: 140 IIATDGKV 147




342|Sequence|1706|1715|DGEVTAVEEA

>sp|RS5_HALWD|SMALL ribosomal subunit protein uS5|Haloquadratum walsbyi (strain DSM

Query: 1 DGEVTAVEEA 10
DG+VT++E+A
Sbjct: 23 DGDVTSMEQA 32


>sp|RS5_METBU|SMALL ribosomal subunit protein uS5|Methanococcoides burtonii (strain

Query: 1 DGEVTAVEEA 10
DG+VT+++EA
Sbjct: 21 DGQVTSMDEA 30


>sp|DMSR_HALSA|DIMETHYL sulfoxide reductase transcriptional activator|Halobacterium

Query: 1 DGEVTAVEE 9
DGEVTAV
Sbjct: 38 DGEVTAVRH 46


>sp|HPRL2_HALMA|HGPRTASE-LIKE protein 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 DGEVTAVEE 9
DGEVT V+E
Sbjct: 177 DGEVTIVDE 185


>sp|CDAT8_METKA|TRNA(CYTOSINE(8)) deaminase|Methanopyrus kandleri (strain AV19 /

Query: 2 GEVTAVEEA 10
GE+ AVEEA
Sbjct: 32 GEIVAVEEA 40


>sp|RS27_HALMA|SMALL ribosomal subunit protein eS27|Haloarcula marismortui (strain

Query: 1 DGEVTAVEEA 10
+GEVTAV EA
Sbjct: 47 EGEVTAVVEA 56


>sp|NUCS1_HALSA|ENDONUCLEASE NucS 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 DGEVTAVE 8
DG VTAVE
Sbjct: 167 DGTVTAVE 174


>sp|MALK_THELN|TREHALOSE/MALTOSE import ATP-binding protein MalK|Thermococcus litoralis (strain

Query: 2 GEVTAVEE 9
GEVTAV E
Sbjct: 14 GEVTAVRE 21


>sp|GCSH_HALSA|PROBABLE glycine cleavage system H|Halobacterium salinarum (strain ATCC

Query: 2 GEVTAVEEA 10
GEVTAV +A
Sbjct: 74 GEVTAVNDA 82


>sp|GCSH_HALS3|PROBABLE glycine cleavage system H|Halobacterium salinarum (strain ATCC

Query: 2 GEVTAVEEA 10
GEVTAV +A
Sbjct: 74 GEVTAVNDA 82


>sp|IF2P_HALMA|PROBABLE translation initiation factor IF-2|Haloarcula marismortui (strain

Query: 1 DGEVTAVEEA 10
D VTA+EEA
Sbjct: 450 DDHVTAIEEA 459


>sp|AATA_NATPD|A-TYPE ATP synthase subunit A|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GEVTAVE 8
GEVTAVE
Sbjct: 165 GEVTAVE 171


>sp|NADK_ARCFU|NAD kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DGEVTAVEEA 10
DG V +EEA
Sbjct: 10 DGHVKRIEEA 19


>sp|AATA_HALVD|A-TYPE ATP synthase subunit A|Haloferax volcanii (strain ATCC 29605

Query: 2 GEVTAVEE 9
GEV AVEE
Sbjct: 166 GEVVAVEE 173




343|Sequence|1711|1720|AVEEAPVNAC

>sp|DNLI_CALMQ|DNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 AVEEAPVN 8
A+EE P+N
Sbjct: 344 AIEEYPIN 351


>sp|Y514_METJA|UNCHARACTERIZED polyferredoxin-like protein MJ0514|Methanocaldococcus jannaschii

Query: 2 VEEAPVNA 9
+EE P+NA
Sbjct: 207 IEECPINA 214


>sp|RNFB_METAC|ION-TRANSLOCATING oxidoreductase complex subunit B|Methanosarcina acetivorans

Query: 3 EEAPVNAC 10
+ APVN+C
Sbjct: 68 QGAPVNSC 75




344|Sequence|1716|1725|PVNACPPGFR

>sp|OTC_METTH|ORNITHINE carbamoyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 4 ACPPGF 9
ACPPG+
Sbjct: 173 ACPPGY 178


>sp|GLCDH_THETK|GLUCOSE 1-dehydrogenase|Thermoproteus tenax (strain ATCC 35583

Query: 1 PVNACPPG 8
PV+ CPPG
Sbjct: 99 PVDYCPPG 106


>sp|NUCS_THEKO|ENDONUCLEASE NucS|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PVNACPPGFR 10
PVN PPG R
Sbjct: 74 PVNWQPPGSR 83


>sp|MFNA_METTH|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanothermobacter

Query: 2 VNACPPGFR 10
V++CPP R
Sbjct: 328 VSSCPPAIR 336


>sp|NUCS_SULAC|ENDONUCLEASE NucS|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PVNACPPGFR 10
PVN PPG R
Sbjct: 68 PVNWQPPGSR 77


>sp|GUAAA_METTP|GMP synthase [glutamine-hydrolyzing] subunit A|Methanothrix

Query: 2 VNACPPGFR 10
V CPP FR
Sbjct: 125 VTICPPEFR 133


>sp|BRIX_METTH|PROBABLE Brix domain-containing ribosomal biogenesis|Methanothermobacter

Query: 2 VNACPPG 8
V++CPPG
Sbjct: 93 VSSCPPG 99


>sp|PYRC_SACS2|DIHYDROOROTASE solfataricus (strain ATCC 35092

Query: 1 PVNACPPG 8
P CPPG
Sbjct: 271 PYEICPPG 278


>sp|NUCS_PYRHO|ENDONUCLEASE NucS|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PVNACPPG 8
PVN PPG
Sbjct: 72 PVNWQPPG 79


>sp|NUCS_PYRFU|ENDONUCLEASE NucS|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PVNACPPG 8
PVN PPG
Sbjct: 74 PVNWQPPG 81


>sp|NUCS_PYRAB|ENDONUCLEASE NucS|Pyrococcus abyssi (strain GE5 /

Query: 1 PVNACPPG 8
PVN PPG
Sbjct: 72 PVNWQPPG 79


>sp|SYE_THEVO|GLUTAMATE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 VNACPPGFR 10
+N CPP R
Sbjct: 491 INWCPPNSR 499


>sp|RNFB_METAC|ION-TRANSLOCATING oxidoreductase complex subunit B|Methanosarcina acetivorans

Query: 1 PVNACPPG 8
PVN+CP G
Sbjct: 71 PVNSCPVG 78


>sp|OTC_PICTO|ORNITHINE carbamoyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 4 ACPPGF 9
ACP GF
Sbjct: 175 ACPKGF 180


>sp|NUCS_SULTO|ENDONUCLEASE NucS|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PVNACPPG 8
P+N PPG
Sbjct: 69 PINWQPPG 76


>sp|SYV_METMP|VALINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 PVNACP 6
PVN CP
Sbjct: 169 PVNWCP 174


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PVNACP 6
PVN CP
Sbjct: 169 PVNWCP 174


>sp|SYV_HALSA|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 PVNACP 6
PVN CP
Sbjct: 171 PVNWCP 176


>sp|SYV_HALS3|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 PVNACP 6
PVN CP
Sbjct: 171 PVNWCP 176


>sp|SYV_NATPD|VALINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PVNACP 6
PVN CP
Sbjct: 171 PVNWCP 176


>sp|AMPA_CENSY|PROBABLE cytosol aminopeptidase|Cenarchaeum symbiosum (strain A)

Query: 1 PVNACPP 7
P N CPP
Sbjct: 178 PPNECPP 184


>sp|SYV_NANEQ|VALINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 PVNACP 6
P+N CP
Sbjct: 160 PINYCP 165


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PVNACP 6
PVN CP
Sbjct: 173 PVNWCP 178


>sp|MPTN_METMP|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 VNACP 6
VNACP
Sbjct: 260 VNACP 264


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PVNACP 6
PVN CP
Sbjct: 173 PVNWCP 178


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PVNACP 6
PVN CP
Sbjct: 173 PVNWCP 178


>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 PVNACP 6
PVN CP
Sbjct: 187 PVNWCP 192


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PVNACP 6
PVN CP
Sbjct: 172 PVNWCP 177


>sp|G3P_NATPD|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 VNACPPG 8
V+ACP G
Sbjct: 84 VDACPSG 90


>sp|Y1574_ARCFU|UNCHARACTERIZED protein AF_1574|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PVNACPP 7
P ACPP
Sbjct: 222 PDTACPP 228


>sp|GNTDO_HALSB|GENTISATE 1,2-dioxygenase|Haloferax sp

Query: 1 PVNACPPGFR 10
P+ PPGF+
Sbjct: 64 PIADLPPGFQ 73


>sp|SYV_METTP|VALINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PVNACP 6
PVN CP
Sbjct: 170 PVNWCP 175


>sp|RPO3_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus solfataricus (strain ATCC

Query: 2 VNACPPG 8
VN CP G
Sbjct: 180 VNVCPEG 186


>sp|GUAAA_THEKO|GMP synthase [glutamine-hydrolyzing] subunit A|Thermococcus

Query: 2 VNACPPGFR 10
V PPGF+
Sbjct: 131 VKELPPGFK 139


>sp|SYE_THEAC|GLUTAMATE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VNACPPGFR 10
+N CP G R
Sbjct: 491 INWCPEGSR 499


>sp|GLCD2_VULM7|GLUCOSE 1-dehydrogenase 2|Vulcanisaeta moutnovskia (strain 768-28)

Query: 1 PVNACPPG 8
PV+ CP G
Sbjct: 99 PVDFCPVG 106


>sp|GLCD1_CALMQ|GLUCOSE 1-dehydrogenase 1|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 PVNACPPG 8
PV+ CP G
Sbjct: 99 PVDYCPMG 106


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 4 ACPPGFR 10
ACP G R
Sbjct: 414 ACPQGIR 420


>sp|HDRB2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 2 VNACP 6
VNACP
Sbjct: 229 VNACP 233


>sp|HDRB_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit B|Methanosarcina mazei (strain

Query: 2 VNACP 6
VNACP
Sbjct: 229 VNACP 233


>sp|RS6E_METKA|SMALL ribosomal subunit protein eS6|Methanopyrus kandleri (strain AV19

Query: 6 PPGFR 10
PPGFR
Sbjct: 80 PPGFR 84




345|Sequence|1721|1730|PPGFRPWVTE

>sp|Y400_METMA|UPF0228 protein MM_0400|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PPGFRPWVTE 10
P GFR W+ E
Sbjct: 97 PDGFRYWIPE 106


>sp|SYA_META3|ALANINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 FRPWVTE 10
F+PWVT+
Sbjct: 104 FQPWVTK 110


>sp|SYA_METVS|ALANINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 4 FRPWVT 9
F+PWVT
Sbjct: 104 FQPWVT 109


>sp|SYA_METST|ALANINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 FRPWVT 9
F+PWVT
Sbjct: 96 FQPWVT 101


>sp|SYA_METS3|ALANINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 FRPWVT 9
F+PWVT
Sbjct: 96 FQPWVT 101


>sp|SYA_METMP|ALANINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 4 FRPWVT 9
F+PWVT
Sbjct: 104 FQPWVT 109


>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 4 FRPWVT 9
F+PWVT
Sbjct: 104 FQPWVT 109


>sp|SYA_METM6|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 4 FRPWVT 9
F+PWVT
Sbjct: 104 FQPWVT 109


>sp|SYA_METM5|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 4 FRPWVT 9
F+PWVT
Sbjct: 104 FQPWVT 109


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 FRPWVTE 10
F+PWVTE
Sbjct: 106 FQPWVTE 112


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 4 FRPWVTE 10
F+PWVTE
Sbjct: 103 FQPWVTE 109


>sp|SYA_METJA|ALANINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 FRPWVTE 10
F+PW+T+
Sbjct: 102 FQPWITK 108


>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 FRPWVT 9
F+PWVT
Sbjct: 99 FQPWVT 104


>sp|NUCS1_HALSA|ENDONUCLEASE NucS 1|Halobacterium salinarum (strain ATCC 700922

Query: 2 PGFRPWVTE 10
PGF+P TE
Sbjct: 143 PGFQPLATE 151


>sp|K6PF_THEZI|ADP-SPECIFIC phosphofructokinase|Thermococcus zilligii

Query: 2 PGFRPWVTE 10
PG RP++ E
Sbjct: 209 PGLRPFLPE 217


>sp|PUR1_PYRAB|AMIDOPHOSPHORIBOSYLTRANSFERASE abyssi (strain GE5 /

Query: 1 PPGFRPWV 8
P GFRP V
Sbjct: 180 PVGFRPLV 187


>sp|RS6E_SULTO|SMALL ribosomal subunit protein eS6|Sulfurisphaera tokodaii (strain DSM

Query: 1 PPGFRP 6
PPGF P
Sbjct: 179 PPGFYP 184


>sp|RS6E_STAMF|SMALL ribosomal subunit protein eS6|Staphylothermus marinus (strain ATCC

Query: 1 PPGFRP 6
PPGF P
Sbjct: 181 PPGFHP 186


>sp|RS6E_SACI7|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 1 PPGFRP 6
PPGF P
Sbjct: 180 PPGFYP 185


>sp|RS6E_SACI6|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 1 PPGFRP 6
PPGF P
Sbjct: 180 PPGFYP 185


>sp|RS6E_SACI4|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 1 PPGFRP 6
PPGF P
Sbjct: 180 PPGFYP 185


>sp|RS6E_SACI3|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 1 PPGFRP 6
PPGF P
Sbjct: 180 PPGFYP 185


>sp|RS6E_SACI2|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 1 PPGFRP 6
PPGF P
Sbjct: 180 PPGFYP 185


>sp|RS6E_METKA|SMALL ribosomal subunit protein eS6|Methanopyrus kandleri (strain AV19

Query: 1 PPGFRP 6
PPGFRP
Sbjct: 80 PPGFRP 85


>sp|RS6E_SACS2|SMALL ribosomal subunit protein eS6|Saccharolobus solfataricus (strain

Query: 1 PPGFRP 6
PPGF P
Sbjct: 180 PPGFYP 185


>sp|KPTA_PYRFU|PROBABLE RNA 2'-phosphotransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 6 PWVTE 10
PWVTE
Sbjct: 49 PWVTE 53


>sp|KPTA_PYRHO|PROBABLE RNA 2'-phosphotransferase|Pyrococcus horikoshii (strain ATCC

Query: 6 PWVTE 10
PWVTE
Sbjct: 44 PWVTE 48


>sp|TMCA_THEKO|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus kodakarensis (strain

Query: 3 GFRPWVTE 10
GF+P+V E
Sbjct: 340 GFKPYVVE 347


>sp|TMCA_THES3|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus sp. (strain AM4)

Query: 3 GFRPWVTE 10
GF+P+V E
Sbjct: 339 GFKPYVVE 346


>sp|ACDD_METTH|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanothermobacter

Query: 2 PGFRPWVTE 10
P R W+TE
Sbjct: 375 PDLREWITE 383


>sp|SYA_PYRAR|ALANINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 FRPWVT 9
F+PWVT
Sbjct: 99 FQPWVT 104


>sp|TMCA_SACI7|TRNA(MET) cytidine acetyltransferase TmcA|Saccharolobus islandicus (strain

Query: 3 GFRPWV 8
GF PW+
Sbjct: 64 GFHPWL 69


>sp|TMCA1_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 1|Saccharolobus solfataricus

Query: 3 GFRPWV 8
GF PW+
Sbjct: 64 GFHPWL 69


>sp|NTPTH_AERPE|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Aeropyrum pernix (strain ATCC 700893

Query: 2 PGFRPWVTE 10
PGFR +TE
Sbjct: 136 PGFREALTE 144


>sp|LON_METBF|LON protease|Methanosarcina barkeri (strain Fusaro /

Query: 6 PWVTE 10
PW+TE
Sbjct: 309 PWITE 313


>sp|TRPB1_METMA|TRYPTOPHAN synthase beta chain 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GFRPWVT 9
FR WVT
Sbjct: 179 AFRDWVT 185


>sp|Y1472_METJA|UNCHARACTERIZED protein MJ1472|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PGFRPWVTE 10
PG++P + E
Sbjct: 535 PGYKPLIEE 543


>sp|Y4032_METAC|UPF0228 protein MA_4032|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PPGFRPWVTE 10
P G R W+ E
Sbjct: 162 PDGTRYWIPE 171


>sp|RL14_NITMS|LARGE ribosomal subunit protein uL14|Nitrosopumilus maritimus (strain

Query: 4 FRPWVTE 10
FRP+VT+
Sbjct: 12 FRPYVTK 18


>sp|SYA_PYRIL|ALANINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 FRPWVT 9
F+PWVT
Sbjct: 99 FQPWVT 104


>sp|RS6E_PYRCJ|SMALL ribosomal subunit protein eS6|Pyrobaculum calidifontis (strain

Query: 1 PPGFRP 6
PPG+RP
Sbjct: 85 PPGYRP 90


>sp|Y3125_METAC|UPF0228 protein MA_3125|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PPGFRPWVTE 10
P G R W+ E
Sbjct: 161 PDGSRYWIPE 170


>sp|SYA_PYRAE|ALANINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 FRPWVT 9
F+PWVT
Sbjct: 99 FQPWVT 104


>sp|SYA_PYRCJ|ALANINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 FRPWVT 9
F+PWVT
Sbjct: 104 FQPWVT 109


>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 4 FRPWVT 9
F+PWVT
Sbjct: 103 FQPWVT 108


>sp|SYA_PYRNV|ALANINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 FRPWVT 9
F+PWVT
Sbjct: 99 FQPWVT 104


>sp|RS6E_METJA|SMALL ribosomal subunit protein eS6|Methanocaldococcus jannaschii

Query: 1 PPGFRP 6
PPGF+P
Sbjct: 77 PPGFKP 82


>sp|RS6E_PYRAR|SMALL ribosomal subunit protein eS6|Pyrobaculum arsenaticum (strain DSM

Query: 1 PPGFRP 6
PPG+RP
Sbjct: 85 PPGYRP 90


>sp|SYC_IGNH4|CYSTEINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 GFRPWV 8
G RPWV
Sbjct: 243 GVRPWV 248


>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 PPGFRPWVTE 10
P RPWV E
Sbjct: 512 PDLHRPWVDE 521


>sp|RS6E_PYRHO|SMALL ribosomal subunit protein eS6|Pyrococcus horikoshii (strain ATCC

Query: 2 PGFRP 6
PGFRP
Sbjct: 92 PGFRP 96


>sp|PCKA_AERPE|PHOSPHOENOLPYRUVATE carboxykinase (ATP)|Aeropyrum pernix (strain ATCC 700893

Query: 2 PGFRPWVTE 10
PGF P++ E
Sbjct: 369 PGFDPFMLE 377


>sp|RTCA_AERPE|RNA 3'-terminal phosphate cyclase|Aeropyrum pernix (strain ATCC

Query: 1 PPGFRP 6
PPG RP
Sbjct: 46 PPGLRP 51


>sp|RS6E_THESM|SMALL ribosomal subunit protein eS6|Thermococcus sibiricus (strain DSM

Query: 2 PGFRPW 7
PGFRP
Sbjct: 92 PGFRPQ 97




346|Sequence|1726|1735|PWVTEEAYVP

>sp|KPTA_PYRFU|PROBABLE RNA 2'-phosphotransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PWVTEE 6
PWVTEE
Sbjct: 49 PWVTEE 54


>sp|KPTA_PYRHO|PROBABLE RNA 2'-phosphotransferase|Pyrococcus horikoshii (strain ATCC

Query: 1 PWVTEE 6
PWVTEE
Sbjct: 44 PWVTEE 49


>sp|LON_METBF|LON protease|Methanosarcina barkeri (strain Fusaro /

Query: 1 PWVTEE 6
PW+TEE
Sbjct: 309 PWITEE 314


>sp|T1RH_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 PWVTEE 6
PW+TEE
Sbjct: 82 PWLTEE 87


>sp|PGP_METMJ|PHOSPHOGLYCOLATE phosphatase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 WVTEEAY 8
WV+EE Y
Sbjct: 210 WVSEEGY 216


>sp|KPTA_PYRAB|PROBABLE RNA 2'-phosphotransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 PWVTEE 6
PWVT+E
Sbjct: 50 PWVTKE 55


>sp|1A1D_PYRHO|PUTATIVE 1-aminocyclopropane-1-carboxylate deaminase|Pyrococcus horikoshii

Query: 1 PWVTEEAYVP 10
PW T Y+P
Sbjct: 19 PWETPIQYLP 28


>sp|1A1D_PYRFU|PUTATIVE 1-aminocyclopropane-1-carboxylate deaminase|Pyrococcus furiosus

Query: 1 PWVTEEAYVP 10
PW T Y+P
Sbjct: 19 PWETPIQYLP 28


>sp|AMYA_PYRAB|ALPHA-AMYLASE abyssi (strain GE5 /

Query: 2 WVTEEAY 8
WV EEAY
Sbjct: 21 WVMEEAY 27


>sp|1A1D_PYRAB|PUTATIVE 1-aminocyclopropane-1-carboxylate deaminase|Pyrococcus abyssi

Query: 1 PWVTEEAYVP 10
PW T Y+P
Sbjct: 19 PWETPIQYLP 28


>sp|TIAS_METV3|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanococcus voltae (strain

Query: 1 PWVTEEAY 8
P +TEE+Y
Sbjct: 137 PEITEESY 144


>sp|HELS_ARCFU|ATP-DEPENDENT DNA helicase Hel308|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WVTEEAY 8
WV EEA+
Sbjct: 531 WVEEEAF 537


>sp|K6PF_METAC|ADP-SPECIFIC phosphofructokinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PWVTEE 6
PW++EE
Sbjct: 137 PWLSEE 142


>sp|CDC65_HALSA|ORC1-TYPE DNA replication protein 5|Halobacterium salinarum (strain ATCC

Query: 2 WVTEE 6
WVTEE
Sbjct: 341 WVTEE 345


>sp|Y2028_ARCFU|UNCHARACTERIZED protein AF_2028|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PWVTEEAYVP 10
P++ EE Y P
Sbjct: 159 PFIVEEKYDP 168


>sp|Y802_METJA|UNCHARACTERIZED protein MJ0802|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VTEEAYVP 10
+T+E Y+P
Sbjct: 85 ITDETYLP 92


>sp|SYV_PICTO|VALINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 PWVTEEAY 8
P++TEE Y
Sbjct: 666 PFITEELY 673


>sp|SYV_THEVO|VALINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PWVTEEAY 8
P++TEE Y
Sbjct: 686 PFITEEIY 693


>sp|MALQ_THELN|4-ALPHA-GLUCANOTRANSFERASE litoralis (strain ATCC 51850

Query: 2 WVTEEAY 8
WV EEAY
Sbjct: 21 WVFEEAY 27


>sp|AMYA_PYRFU|ALPHA-AMYLASE furiosus (strain ATCC 43587

Query: 2 WVTEEAY 8
WV EEAY
Sbjct: 22 WVFEEAY 28


>sp|Y1331_ARCFU|UNCHARACTERIZED protein AF_1331|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VTEEAYVP 10
+TEE YVP
Sbjct: 106 LTEEHYVP 113


>sp|SYI_HALSA|ISOLEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 PWVTEEAY 8
P+VTEE Y
Sbjct: 784 PFVTEELY 791


>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 PWVTEEAY 8
P+VTEE Y
Sbjct: 719 PFVTEELY 726


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PWVTEEAY 8
P++TEE Y
Sbjct: 793 PYITEEIY 800


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PWVTEEAY 8
P++TEE Y
Sbjct: 793 PYITEEIY 800




347|Sequence|1731|1740|EAYVPVSDMN

>sp|Y2239_ARCFU|UNCHARACTERIZED protein AF_2239|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EAYVPVSDM 9
EA++PV++M
Sbjct: 281 EAFLPVTEM 289


>sp|TRPF_SULAC|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 YVPVSDM 9
YVP SDM
Sbjct: 99 YVPSSDM 105


>sp|FRHG_METBF|COENZYME F420 hydrogenase subunit gamma|Methanosarcina barkeri (strain

Query: 1 EAYVPVSDM 9
E+Y+P+ D+
Sbjct: 111 ESYLPIGDL 119


>sp|SYW_METTH|TRYPTOPHAN--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 EAYVPVSDM 9
E ++P++DM
Sbjct: 94 EIFIPIADM 102


>sp|Y1214_METKA|UPF0210 protein MK1214|Methanopyrus kandleri (strain AV19 /

Query: 1 EAYVPVSD 8
EA++PVS+
Sbjct: 333 EAFIPVSE 340


>sp|EF2_METST|ELONGATION factor 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 EAYVPVSDM 9
E+ VPVS+M
Sbjct: 665 ESKVPVSEM 673


>sp|DPO4_METMJ|DNA polymerase IV|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 EAYVPVSD 8
EAY+ VSD
Sbjct: 111 EAYLDVSD 118


>sp|SYW_METKA|TRYPTOPHAN--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 EAYVPVSDM 9
+ YVP++D+
Sbjct: 96 KVYVPIADL 104


>sp|RL3_SULTO|LARGE ribosomal subunit protein uL3|Sulfurisphaera tokodaii (strain DSM

Query: 1 EAYVPVS 7
E YVPVS
Sbjct: 70 EIYVPVS 76


>sp|RL14_AERPE|LARGE ribosomal subunit protein uL14|Aeropyrum pernix (strain ATCC

Query: 2 AYVPVSD 8
+YVPV+D
Sbjct: 24 SYVPVAD 30




348|Sequence|1736|1745|VSDMNGLGFK

>sp|RS13_NATPD|SMALL ribosomal subunit protein uS13|Natronomonas pharaonis (strain

Query: 1 VSDMNGLG 8
++DMNG+G
Sbjct: 36 LTDMNGIG 43


>sp|T2MW_METWO|TYPE II restriction enzyme MwoI|Methanothermobacter wolfeii

Query: 2 SDMNGLGFK 10
S MN LG+K
Sbjct: 80 SKMNSLGYK 88


>sp|EF1A_IGNH4|ELONGATION factor 1-alpha|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 MNGLGFK 10
M GLGFK
Sbjct: 179 MKGLGFK 185


>sp|ENGB_HALMA|PROBABLE GTP-binding protein EngB|Haloarcula marismortui (strain ATCC

Query: 1 VSDMNGLGF 9
+SD+ G GF
Sbjct: 58 ISDLPGFGF 66


>sp|ENGB_METMA|PROBABLE GTP-binding protein EngB|Methanosarcina mazei (strain ATCC

Query: 1 VSDMNGLGF 9
++DM G GF
Sbjct: 60 ITDMPGFGF 68


>sp|ENGB_METBF|PROBABLE GTP-binding protein EngB|Methanosarcina barkeri (strain Fusaro /

Query: 1 VSDMNGLGF 9
++DM G GF
Sbjct: 60 ITDMPGFGF 68


>sp|COFE_METBF|COENZYME F420:L-glutamate ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 VSDMNGLGFK 10
V+D NG FK
Sbjct: 148 VTDTNGRAFK 157


>sp|ARLMC_PYRHO|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus horikoshii

Query: 4 MNGLGFK 10
+NG+GFK
Sbjct: 119 VNGIGFK 125


>sp|ARLMC_PYRAB|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus abyssi (strain

Query: 4 MNGLGFK 10
+NG+GFK
Sbjct: 117 VNGIGFK 123


>sp|COFE_METAC|COENZYME F420:L-glutamate ligase|Methanosarcina acetivorans (strain ATCC

Query: 1 VSDMNGLGFK 10
++D NG FK
Sbjct: 148 ITDTNGRAFK 157


>sp|PGP_PYRIL|PHOSPHOGLYCOLATE phosphatase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 VSDMNGLGFK 10
V + +GLGFK
Sbjct: 205 VEEPSGLGFK 214


>sp|COFE_METMA|COENZYME F420:L-glutamate ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VSDMNGLGFK 10
++D NG FK
Sbjct: 148 ITDTNGRAFK 157


>sp|DHE2_PYRCJ|NAD(+)-DEPENDENT glutamate dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 VSDMNGLGFK 10
VSD+NG+ ++
Sbjct: 243 VSDVNGVVYR 252


>sp|GMS_METOI|GMGT synthase|Methanothermococcus okinawensis (strain DSM 14208

Query: 2 SDMNGLGFK 10
D+N LG+K
Sbjct: 48 EDINSLGYK 56


>sp|GLYA_CENSY|SERINE hydroxymethyltransferase|Cenarchaeum symbiosum (strain A)

Query: 4 MNGLGFK 10
++GLGFK
Sbjct: 308 LSGLGFK 314




349|Sequence|1741|1750|GLGFKPFDLV

>sp|FUMC_SACS2|FUMARATE hydratase class II|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GLGFKP 6
GLGFKP
Sbjct: 227 GLGFKP 232


>sp|RPO5_NITMS|DNA-DIRECTED RNA polymerase subunit Rpo5|Nitrosopumilus maritimus (strain

Query: 1 GLGFKPFDLV 10
GLG KP D++
Sbjct: 53 GLGVKPGDMI 62


>sp|HYPF_METJA|PROBABLE carbamoyltransferase HypF|Methanocaldococcus jannaschii (strain

Query: 1 GLGFKPF 7
G+GF+PF
Sbjct: 22 GVGFRPF 28


>sp|RIFK_THEKO|RIBOFLAVIN kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LGFKPF 7
LGFKPF
Sbjct: 114 LGFKPF 119


>sp|KCY_METLZ|CYTIDYLATE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 LGFKPFDLV 10
L F P+DL+
Sbjct: 143 LDFSPYDLI 151


>sp|METK_SACI7|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 GLGFKPF 7
G+GF PF
Sbjct: 164 GVGFAPF 170


>sp|METK_SACI6|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 GLGFKPF 7
G+GF PF
Sbjct: 164 GVGFAPF 170


>sp|METK_SACI4|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GLGFKPF 7
G+GF PF
Sbjct: 164 GVGFAPF 170


>sp|METK_SACI3|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 GLGFKPF 7
G+GF PF
Sbjct: 164 GVGFAPF 170


>sp|METK_SACI2|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 GLGFKPF 7
G+GF PF
Sbjct: 164 GVGFAPF 170


>sp|METK_SACI1|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 GLGFKPF 7
G+GF PF
Sbjct: 164 GVGFAPF 170


>sp|METK_PICTO|S-ADENOSYLMETHIONINE synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 GLGFKPF 7
G+GF PF
Sbjct: 163 GVGFAPF 169


>sp|METK_METTM|S-ADENOSYLMETHIONINE synthase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 GLGFKPF 7
G+GF PF
Sbjct: 160 GVGFAPF 166


>sp|METK_METTH|S-ADENOSYLMETHIONINE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GLGFKPF 7
G+GF PF
Sbjct: 160 GVGFAPF 166


>sp|METK_HYPBU|S-ADENOSYLMETHIONINE synthase|Hyperthermus butylicus (strain DSM 5456

Query: 1 GLGFKPF 7
G+GF PF
Sbjct: 167 GVGFAPF 173


>sp|SYE_HALMA|GLUTAMATE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 LGFKPFDLV 10
LGF+P D+V
Sbjct: 171 LGFEPDDVV 179


>sp|RIFK_METBU|RIBOFLAVIN kinase|Methanococcoides burtonii (strain DSM 6242

Query: 2 LGFKPF 7
LGFKP+
Sbjct: 120 LGFKPY 125


>sp|GATD_PYRFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GLGFKPFDLV 10
GLG P DL+
Sbjct: 338 GLGHTPSDLI 347


>sp|TMCA_THES3|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus sp. (strain AM4)

Query: 2 LGFKPF 7
LGFKP+
Sbjct: 338 LGFKPY 343


>sp|TMCA_THEKO|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus kodakarensis (strain

Query: 2 LGFKPF 7
LGFKP+
Sbjct: 339 LGFKPY 344


>sp|PAN_SULTO|PROTEASOME-ACTIVATING nucleotidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GFKPFDLV 10
GFKP D V
Sbjct: 267 GFKPLDNV 274


>sp|RIFK_METMJ|RIBOFLAVIN kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LGFKPF 7
LGF+PF
Sbjct: 123 LGFEPF 128


>sp|CBIA_SACS2|COBYRINATE a,c-diamide synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LGFKPFD 8
LG+ PFD
Sbjct: 167 LGYVPFD 173


>sp|NITR_PYRAB|NITRILASE abyssi (strain GE5 /

Query: 2 LGFKPFDL 9
LGF+ FDL
Sbjct: 129 LGFRVFDL 136


>sp|URIC_HALJB|URICASE jeotgali (strain DSM 18796

Query: 3 GFKPFDLV 10
GF P DLV
Sbjct: 124 GFDPSDLV 131


>sp|MCH_METBU|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GLGFKPFDL 9
GLG KP +L
Sbjct: 114 GLGLKPKEL 122


>sp|COAD_THEKO|PHOSPHOPANTETHEINE adenylyltransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 GFKPFDLV 10
G KP D+V
Sbjct: 118 GLKPLDIV 125


>sp|Y1051_METJA|UNCHARACTERIZED protein MJ1051|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LGFKPFD 8
LGFKP +
Sbjct: 153 LGFKPME 159


>sp|PYRK_THEKO|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Thermococcus

Query: 1 GLGFKPFDLV 10
G+G KPF L
Sbjct: 40 GVGEKPFSLA 49


>sp|EF1A_METST|ELONGATION factor 1-alpha|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 LGFKPFDL 9
+GFKP D+
Sbjct: 162 VGFKPSDV 169


>sp|ILVD_PYRCJ|DIHYDROXY-ACID dehydratase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 LGFKPFDLV 10
LG KP D+V
Sbjct: 246 LGIKPRDVV 254




350|Sequence|1746|1755|PFDLVIPFAV

>sp|OGT_METTH|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 PFDLVIP 7
PF LVIP
Sbjct: 135 PFPLVIP 141


>sp|ENDA_NATPD|TRNA-SPLICING endonuclease|Natronomonas pharaonis (strain ATCC 35678

Query: 3 DLVIPFAV 10
DLV+PF V
Sbjct: 67 DLVVPFLV 74


>sp|TRM1_HALWD|TRNA (guanine(26)-N(2))-dimethyltransferase|Haloquadratum walsbyi

Query: 1 PFDLVIPFA 9
PF IPFA
Sbjct: 135 PFGTPIPFA 143


>sp|TRM1_HALMA|TRNA (guanine(26)-N(2))-dimethyltransferase|Haloarcula marismortui

Query: 1 PFDLVIPFA 9
PF IPFA
Sbjct: 122 PFGTPIPFA 130


>sp|RL10_PYRAE|LARGE ribosomal subunit protein uL10|Pyrobaculum aerophilum (strain ATCC

Query: 1 PFDLVIP 7
PFD+V+P
Sbjct: 126 PFDIVVP 132


>sp|DHE3_AERPE|GLUTAMATE dehydrogenase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PFDLVIPFAV 10
P D+++P A+
Sbjct: 285 PVDILVPAAI 294


>sp|IF2P_HYPBU|PROBABLE translation initiation factor IF-2|Hyperthermus butylicus (strain

Query: 1 PFDLVIP 7
PF L+IP
Sbjct: 72 PFKLIIP 78


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 PFDLVIPFAV 10
P D+++P+ +
Sbjct: 890 PQDIILPYGI 899


>sp|GGGPS_METB6|GERANYLGERANYLGLYCERYL phosphate synthase|Methanoregula boonei (strain DSM 21154

Query: 1 PFDLVIPFA 9
P+D+V+P A
Sbjct: 109 PWDMVVPEA 117


>sp|ATGT_PYRAE|TRNA-GUANINE(15) transglycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 LVIPFAV 10
LV+PFAV
Sbjct: 227 LVLPFAV 233


>sp|DGGGP_THEGJ|DIGERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 PFDLVIPFAV 10
P DL+I +AV
Sbjct: 231 PVDLIILYAV 240


>sp|AGLB_METJA|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PFDLVIPFAV 10
P V+PF+V
Sbjct: 592 PLSAVVPFSV 601


>sp|KDPA_THEAC|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Thermoplasma acidophilum (strain

Query: 2 FDLVIPFAV 10
FDL++P V
Sbjct: 195 FDLILPLTV 203




351|Sequence|1751|1760|IPFAVRKGEI

>sp|GLMA_THEKO|EXO-BETA-D-GLUCOSAMINIDASE kodakarensis (strain ATCC BAA-918

Query: 1 IPFAVRKGEI 10
+PF VRKG++
Sbjct: 708 LPFGVRKGDV 717


>sp|GCSPA_THEVO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 IPFAVRKGEI 10
IP +VRK EI
Sbjct: 23 IPLSVRKKEI 32


>sp|CARB_HALSA|CARBAMOYL phosphate synthase large chain|Halobacterium salinarum (strain ATCC

Query: 1 IPFAVRKGEI 10
+P A+R+GE+
Sbjct: 975 VPAAIRRGEV 984


>sp|Y1085_METJA|UNCHARACTERIZED protein MJ1085|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IPFAVRKGEI 10
IPF V GEI
Sbjct: 472 IPFIVENGEI 481


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 1 IPFAVRKGE 9
I FAVR GE
Sbjct: 283 IQFAVRNGE 291


>sp|THYX_HALMA|FLAVIN-DEPENDENT thymidylate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 PFAVRKGEI 10
P AVR+GE+
Sbjct: 109 PEAVREGEL 117


>sp|FPOD_METMA|F(420)H(2) dehydrogenase subunit D|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IPFAVRKGE 9
+PF +RK E
Sbjct: 228 VPFDIRKNE 236


>sp|DPOL1_SULOH|DNA polymerase 1|Sulfurisphaera ohwakuensis

Query: 1 IPFAVRKGEI 10
+P+ V+KG++
Sbjct: 172 LPYVVKKGKL 181


>sp|PYRC_THEVO|DIHYDROOROTASE volcanium (strain ATCC 51530

Query: 3 FAVRKGEI 10
F +RKG+I
Sbjct: 333 FGIRKGKI 340


>sp|ECFA_METJA|ENERGY-COUPLING factor transporter ATP-binding protein|Methanocaldococcus

Query: 1 IPFAVRKGEI 10
I F V+KGE+
Sbjct: 23 INFKVKKGEM 32


>sp|GSA_AERPE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Aeropyrum pernix (strain ATCC 700893

Query: 2 PFAVRKGE 9
PF V++GE
Sbjct: 34 PFYVKRGE 41


>sp|ACDB2_METTE|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 3 FAVRKGEI 10
FA+ KGE+
Sbjct: 232 FAIEKGEL 239


>sp|TYW31_PYRFU|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 1 IPFAVRKGEI 10
+ A+RKGE+
Sbjct: 18 LEIALRKGEV 27


>sp|TYW31_PYRHO|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 1 IPFAVRKGEI 10
+ A+RKGE+
Sbjct: 18 LEIALRKGEV 27


>sp|AROC_THEGJ|CHORISMATE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 PFAVRKGEI 10
PF VR G +
Sbjct: 258 PFVVRNGRV 266




352|Sequence|1756|1765|RKGEITGEVH

>sp|THIC1_METST|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 RKGEITGEV 9
RKGEIT E+
Sbjct: 8 RKGEITPEM 16


>sp|METK_PYRIL|S-ADENOSYLMETHIONINE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 RKGEITGEV 9
+ GE+TGEV
Sbjct: 364 KSGELTGEV 372


>sp|METK_PYRAE|S-ADENOSYLMETHIONINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RKGEITGEV 9
+ GE+TGEV
Sbjct: 364 KDGELTGEV 372


>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 1 RKGEITGEV 9
+KGE+TG V
Sbjct: 186 KKGEMTGIV 194


>sp|ARLY_METTP|ARGININOSUCCINATE lyase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 RKGEITGEV 9
R G+I+GEV
Sbjct: 7 RLGDISGEV 15


>sp|ARLMC_PYRHO|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus horikoshii

Query: 1 RKGEITGEV 9
R+G+ TGEV
Sbjct: 178 REGKFTGEV 186


>sp|ARLMC_PYRFU|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus furiosus

Query: 1 RKGEITGEV 9
R+G+ TGEV
Sbjct: 176 REGKFTGEV 184


>sp|ARLMC_PYRAB|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus abyssi (strain

Query: 1 RKGEITGEV 9
R+G+ TGEV
Sbjct: 176 REGKFTGEV 184


>sp|GPDA_METTH|GLYCEROL-3-PHOSPHATE dehydrogenase [NAD(P)+]|Methanothermobacter thermautotrophicus

Query: 3 GEITGEVH 10
G+ITGE H
Sbjct: 198 GQITGENH 205


>sp|FEN_METJA|FLAP endonuclease 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RKGEIT 6
RKGEIT
Sbjct: 50 RKGEIT 55


>sp|ATRMA_PYRHO|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus horikoshii (strain

Query: 1 RKGEITGEV 9
R+G+ TGEV
Sbjct: 178 REGKFTGEV 186


>sp|DNAG_METB6|DNA primase DnaG|Methanoregula boonei (strain DSM 21154

Query: 1 RKGEITGEV 9
+KGE +GE+
Sbjct: 63 KKGETSGEI 71


>sp|ATRMA_PYRFU|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus furiosus (strain

Query: 1 RKGEITGEV 9
R+G+ TGE+
Sbjct: 179 REGKFTGEI 187




353|Sequence|1761|1770|TGEVHMPSGK

>sp|CAS5C_SACS2|CRISPR-ASSOCIATED protein Cas5 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TGEVHMPSG 9
TG+V+MP+G
Sbjct: 109 TGKVYMPNG 117


>sp|CAS5A_SACS2|CRISPR system aCascade subunit Cas5|Saccharolobus solfataricus (strain

Query: 1 TGEVHMPSGK 10
TG+V++P+G+
Sbjct: 109 TGKVYIPNGR 118


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 EVHMPSGK 10
E+H P GK
Sbjct: 857 EIHKPKGK 864


>sp|GATA_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Archaeoglobus fulgidus (strain ATCC

Query: 2 GEVHMPSGK 10
GEV MPS K
Sbjct: 273 GEVSMPSFK 281


>sp|HUTU_THEVO|PROBABLE urocanate hydratase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GEVHMPSG 9
GE+H P G
Sbjct: 6 GEIHAPRG 13


>sp|PYRI_THESM|ASPARTATE carbamoyltransferase regulatory chain|Thermococcus sibiricus

Query: 5 HMPSGK 10
H+PSGK
Sbjct: 17 HIPSGK 22


>sp|PYRI_THEVO|ASPARTATE carbamoyltransferase regulatory chain|Thermoplasma volcanium

Query: 5 HMPSGK 10
H+PSGK
Sbjct: 19 HIPSGK 24


>sp|DNAG_PICTO|DNA primase DnaG|Picrophilus torridus (strain ATCC 700027

Query: 2 GEVHMPSG 9
GE H+P+G
Sbjct: 158 GEEHLPAG 165


>sp|HUTU_THEAC|PROBABLE urocanate hydratase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 EVHMPSGK 10
E+H P GK
Sbjct: 7 EIHAPRGK 14


>sp|PYRI_THEAC|ASPARTATE carbamoyltransferase regulatory chain|Thermoplasma acidophilum

Query: 5 HMPSGK 10
H+PSGK
Sbjct: 18 HVPSGK 23


>sp|R1PKT_HALXS|ATP-DEPENDENT ribose-1-phosphate kinase|Halopiger xanaduensis (strain DSM 18323

Query: 2 GEVHMPSG 9
EVH P+G
Sbjct: 216 AEVHTPTG 223


>sp|RPO1C_METMA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanosarcina mazei (strain ATCC

Query: 1 TGEVHMPSGK 10
TG+VH+ S K
Sbjct: 377 TGDVHLISRK 386


>sp|RL2_ARCFU|LARGE ribosomal subunit protein uL2|Archaeoglobus fulgidus (strain ATCC

Query: 4 VHMPSGK 10
V MPSGK
Sbjct: 138 VQMPSGK 144


>sp|PURQ_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GEVHMPSGK 10
G+V PSGK
Sbjct: 175 GKVVFPSGK 183


>sp|ASPD_METHJ|L-ASPARTATE dehydrogenase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 EVHMPSG 9
++H+PSG
Sbjct: 112 KIHIPSG 118


>sp|RL2_METB6|LARGE ribosomal subunit protein uL2|Methanoregula boonei (strain DSM

Query: 4 VHMPSGK 10
V MPSGK
Sbjct: 138 VRMPSGK 144


>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 TGEVHM 6
TGE+HM
Sbjct: 50 TGELHM 55


>sp|RL2_METLZ|LARGE ribosomal subunit protein uL2|Methanocorpusculum labreanum (strain

Query: 4 VHMPSGK 10
V MPSGK
Sbjct: 141 VRMPSGK 147


>sp|RL2_METPE|LARGE ribosomal subunit protein uL2|Methanosphaerula palustris (strain

Query: 4 VHMPSGK 10
V MPSGK
Sbjct: 139 VKMPSGK 145




354|Sequence|1766|1775|MPSGKTATPE

>sp|SYFA_ARCFU|PHENYLALANINE--TRNA ligase alpha subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MPSGKTATPE 10
+ +GKT TPE
Sbjct: 13 LETGKTYTPE 22


>sp|P5CR_METAC|PYRROLINE-5-CARBOXYLATE reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 GKTATPE 10
GK ATPE
Sbjct: 137 GKNATPE 143


>sp|NIFK_METTM|NITROGENASE molybdenum-iron protein beta chain|Methanothermobacter marburgensis

Query: 2 PSGKTATPE 10
P G TA PE
Sbjct: 226 PPGGTAVPE 234


>sp|FAU1_PYRNV|PROBABLE ribonuclease FAU-1|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 PSGKTATPE 10
P GK TPE
Sbjct: 427 PGGKICTPE 435


>sp|CBIF_METJA|COBALT-PRECORRIN-4 C(11)-methyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PSGKTATPE 10
P G+T PE
Sbjct: 142 PEGRTPMPE 150


>sp|RL2_METB6|LARGE ribosomal subunit protein uL2|Methanoregula boonei (strain DSM

Query: 1 MPSGKT 6
MPSGKT
Sbjct: 140 MPSGKT 145




355|Sequence|1771|1780|TATPEIVDNK

>sp|HIS1_HALSA|ATP phosphoribosyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 TATPEIVD 8
TATPEIV+
Sbjct: 130 TATPEIVE 137


>sp|HIS1_HALS3|ATP phosphoribosyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 TATPEIVD 8
TATPEIV+
Sbjct: 130 TATPEIVE 137


>sp|GATD_METST|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosphaera stadtmanae (strain ATCC

Query: 2 ATPEIVD 8
ATPE+VD
Sbjct: 125 ATPELVD 131


>sp|THYX_AERPE|FLAVIN-DEPENDENT thymidylate synthase|Aeropyrum pernix (strain ATCC 700893

Query: 4 PEIVDNK 10
PE+V+NK
Sbjct: 298 PELVENK 304


>sp|Y3528_METJA|UNCHARACTERIZED protein MJECL28|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TATPEIVD 8
TATPE+++
Sbjct: 643 TATPELIN 650


>sp|CHED_METM7|PROBABLE chemoreceptor glutamine deamidase CheD|Methanococcus maripaludis

Query: 1 TATPEIVDN 9
TA PE++D
Sbjct: 63 TAIPELIDR 71


>sp|Y1505_METJA|PUTATIVE ATP-dependent RNA helicase MJ1505|Methanocaldococcus jannaschii

Query: 2 ATPEIVDN 9
ATP++++N
Sbjct: 112 ATPQVIEN 119


>sp|XPB2_SULTO|DNA 3'-5' translocase XPB2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 TATPEIVDNK 10
TATPE D K
Sbjct: 200 TATPERDDGK 209


>sp|PPS_METMA|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TATPEIVDN 9
TAT IVDN
Sbjct: 189 TATISIVDN 197


>sp|COFD_METHJ|2-PHOSPHO-L-LACTATE transferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 ATPEIVD 8
ATPE++D
Sbjct: 174 ATPEVID 180


>sp|SYA_METST|ALANINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 PEIVDNK 10
PEI DNK
Sbjct: 380 PEIKDNK 386


>sp|ADEC_METST|ADENINE deaminase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 TATPEIVDN 9
T +P I+DN
Sbjct: 123 TISPNIIDN 131


>sp|TPIS_METFV|TRIOSEPHOSPHATE isomerase|Methanothermus fervidus (strain ATCC 43054

Query: 2 ATPEIVDN 9
A PE+V+N
Sbjct: 155 AKPEVVEN 162




356|Sequence|1776|1785|IVDNKDGTVT

>sp|SYS_DESA1|SERINE--TRNA ligase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 4 NKDGTVT 10
N+DGTVT
Sbjct: 425 NEDGTVT 431


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 NKDGTV 9
NKDGT+
Sbjct: 835 NKDGTI 840


>sp|SYS_HALSA|SERINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 4 NKDGTVT 10
N DGTVT
Sbjct: 421 NDDGTVT 427


>sp|SYS_HALS3|SERINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 4 NKDGTVT 10
N DGTVT
Sbjct: 421 NDDGTVT 427


>sp|SYS_METB6|SERINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 4 NKDGTVT 10
N+DG+VT
Sbjct: 404 NRDGSVT 410


>sp|SYS_HALLT|SERINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 4 NKDGTVT 10
N DGTVT
Sbjct: 421 NDDGTVT 427


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IVDNKDGTV 9
IV N+DGT+
Sbjct: 288 IVINEDGTM 296


>sp|SYS_HALMA|SERINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 4 NKDGTVT 10
N DGT+T
Sbjct: 422 NDDGTIT 428


>sp|SYL1_SULAC|LEUCINE--TRNA ligase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IVDNKDG 7
+VDNK+G
Sbjct: 242 VVDNKNG 248


>sp|Y589_METJA|UNCHARACTERIZED protein MJ0589|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IVDNKDGTV 9
IV+N+DG +
Sbjct: 90 IVENEDGNL 98


>sp|Y2322_SULTO|UPF0282 protein STK_23220|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VDNKDGTV 9
+++KDGTV
Sbjct: 164 INDKDGTV 171


>sp|AATE_METTP|A-TYPE ATP synthase subunit E|Methanothrix thermoacetophila (strain DSM

Query: 1 IVDNKDGTV 9
+V++KDG+V
Sbjct: 147 VVESKDGSV 155


>sp|Y730_METJA|UNCHARACTERIZED protein MJ0730|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DNKDGTV 9
DNK GTV
Sbjct: 126 DNKKGTV 132


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 1 IVDNKDGT 8
I DN DGT
Sbjct: 125 IKDNSDGT 132


>sp|QUEC_SACS2|7-CYANO-7-DEAZAGUANINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IVDNKDGTV 9
+V KDGTV
Sbjct: 40 VVIQKDGTV 48




357|Sequence|1781|1790|DGTVTVRYAP

>sp|SYS2_METTH|TYPE-2 serine--tRNA ligase|Methanothermobacter thermautotrophicus (strain

Query: 1 DGTVTVRYAP 10
DGT+ VR+ P
Sbjct: 130 DGTIMVRFQP 139


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 1 DGTVTVRYAP 10
+GTVT YAP
Sbjct: 1148 NGTVTFTYAP 1157


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 1 DGTVTVR 7
DGTVT+R
Sbjct: 1334 DGTVTIR 1340


>sp|SYG_PYRFU|GLYCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DGTVTVR 7
DGTVT+R
Sbjct: 537 DGTVTIR 543


>sp|SYG_PYRAB|GLYCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 DGTVTVR 7
DGTVT+R
Sbjct: 539 DGTVTIR 545


>sp|SYG_THEKO|GLYCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DGTVTVR 7
DGTVT+R
Sbjct: 538 DGTVTIR 544


>sp|SYE_METST|GLUTAMATE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 DGTVTVRYAP 10
D VT+R+AP
Sbjct: 95 DKKVTLRFAP 104


>sp|SYG_PYRHO|GLYCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DGTVTVR 7
DGTVT+R
Sbjct: 539 DGTVTIR 545


>sp|SYE_METS5|GLUTAMATE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 2 GTVTVRYAP 10
GTV R+AP
Sbjct: 96 GTVVTRFAP 104


>sp|Y732_METJA|UNCHARACTERIZED protein MJ0732|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DGTVTVRYAP 10
D +TVR+AP
Sbjct: 364 DECLTVRFAP 373


>sp|SYG_METTP|GLYCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 DGTVTVR 7
DGTVTVR
Sbjct: 533 DGTVTVR 539


>sp|YR18_THEPE|UNCHARACTERIZED 18.7 kDa protein in|Thermofilum pendens

Query: 1 DGTVTVRY 8
+GTVTVR+
Sbjct: 74 NGTVTVRF 81


>sp|AATE_PYRIL|A-TYPE ATP synthase subunit E|Pyrobaculum islandicum (strain DSM 4184

Query: 1 DGTVTVRYA 9
DG++TV Y+
Sbjct: 159 DGSITVDYS 167


>sp|Y810_METJA|PROTEIN MJ0810|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DGTVTVRYA 9
+GT VRYA
Sbjct: 8 EGTFAVRYA 16


>sp|AATE_PYRNV|A-TYPE ATP synthase subunit E|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 DGTVTVRYA 9
DG++TV Y+
Sbjct: 159 DGSITVDYS 167


>sp|SYTC_SACS2|THREONINE--TRNA ligase catalytic subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 DGTVTVR 7
+GTVTVR
Sbjct: 502 EGTVTVR 508


>sp|SYTC_SACI7|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 DGTVTVR 7
+GTVTVR
Sbjct: 502 EGTVTVR 508


>sp|SYTC_SACI6|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 1 DGTVTVR 7
+GTVTVR
Sbjct: 502 EGTVTVR 508


>sp|SYTC_SACI4|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 1 DGTVTVR 7
+GTVTVR
Sbjct: 502 EGTVTVR 508


>sp|SYTC_SACI3|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.16.27)

Query: 1 DGTVTVR 7
+GTVTVR
Sbjct: 502 EGTVTVR 508


>sp|SYTC_SACI2|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain L.S.2.15

Query: 1 DGTVTVR 7
+GTVTVR
Sbjct: 502 EGTVTVR 508


>sp|SYTC_SACI1|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 DGTVTVR 7
+GTVTVR
Sbjct: 502 EGTVTVR 508


>sp|SYG_METTH|GLYCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 DGTVTVR 7
DGTVT+R
Sbjct: 535 DGTVTLR 541


>sp|SYG_AERPE|GLYCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DGTVTVR 7
DGTVT+R
Sbjct: 539 DGTVTLR 545


>sp|BLH_HALSA|PROBABLE beta-carotene 15,15'-dioxygenase Blh|Halobacterium salinarum

Query: 2 GTVTVRY 8
GTVTVR+
Sbjct: 78 GTVTVRW 84


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DGTVTVRYA 9
+GTVT RY
Sbjct: 387 EGTVTHRYG 395


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DGTVTVRYA 9
+GTVT RY
Sbjct: 387 EGTVTHRYG 395


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DGTVTVRYA 9
+GTVT RY
Sbjct: 387 EGTVTHRYG 395


>sp|ASSY_NATPD|ARGININOSUCCINATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GTVTVRY 8
GTVT+R+
Sbjct: 332 GTVTIRF 338


>sp|PURO_HALMA|IMP cyclohydrolase|Haloarcula marismortui (strain ATCC 43049

Query: 1 DGTVTVRYAP 10
DGTVTV P
Sbjct: 32 DGTVTVEPTP 41


>sp|SYS_DESA1|SERINE--TRNA ligase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 DGTVTV 6
DGTVTV
Sbjct: 427 DGTVTV 432


>sp|THII_PYRAE|TRNA sulfurtransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GTVTVRYA 9
GT+T+R+A
Sbjct: 206 GTITLRHA 213


>sp|SYT_PYRAR|THREONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 DGTVTVR 7
+GTVTVR
Sbjct: 559 EGTVTVR 565


>sp|SYS_HALLT|SERINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 DGTVTV 6
DGTVTV
Sbjct: 423 DGTVTV 428




358|Sequence|1786|1795|VRYAPTEVGL

>sp|THI4_PYRAE|THIAMINE thiazole synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VRYAPTEVGL 10
VRY P E GL
Sbjct: 86 VRYKPAEDGL 95


>sp|Y130_PYRAB|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus abyssi (strain GE5 /

Query: 1 VRYAPTEVGL 10
VR+A EVGL
Sbjct: 115 VRWALREVGL 124


>sp|FDHA2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 1 VRYAPTEVGL 10
+ +APT VGL
Sbjct: 132 IUHAPTVVGL 141


>sp|SYFA_METMJ|PHENYLALANINE--TRNA ligase alpha subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 RYAPTEVG 9
RY PTE G
Sbjct: 58 RYVPTEEG 65


>sp|RL15_HYPBU|LARGE ribosomal subunit protein uL15|Hyperthermus butylicus (strain DSM

Query: 1 VRYAPTEVG 9
V+YAPT G
Sbjct: 50 VKYAPTWFG 58


>sp|DP2S_PYRAB|DNA polymerase II small subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 VRYAPTEVG 9
+ YAP E+G
Sbjct: 161 ILYAPEEIG 169


>sp|HIS4_METM7|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus maripaludis (strain

Query: 2 RYAPTEVG 9
+Y P E+G
Sbjct: 146 KYTPVEIG 153


>sp|HIS4_METM6|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus maripaludis (strain

Query: 2 RYAPTEVG 9
+Y P E+G
Sbjct: 146 KYTPVEIG 153


>sp|RS4E_HYPBU|SMALL ribosomal subunit protein eS4|Hyperthermus butylicus (strain DSM

Query: 3 YAPTEVG 9
YAP EVG
Sbjct: 182 YAPLEVG 188


>sp|HIS4_METM5|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus maripaludis (strain

Query: 2 RYAPTEVG 9
+Y P E+G
Sbjct: 146 KYTPVEIG 153


>sp|MUTS2_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 2 RYAPTE 7
RY+PTE
Sbjct: 269 RYSPTE 274


>sp|MUTS2_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 2 RYAPTE 7
RY+PTE
Sbjct: 269 RYSPTE 274


>sp|SYY1_PYRAE|TYROSINE--TRNA ligase 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VRYAPTEVG 9
+R+ P EVG
Sbjct: 205 IRFYPLEVG 213




359|Sequence|1791|1800|TEVGLHEMHI

>sp|FTR_METBU|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 1 TEVGLHEMHI 10
TEVG +MH+
Sbjct: 132 TEVGGRKMHV 141


>sp|ATGT_HALVD|TRNA-GUANINE(15) transglycosylase|Haloferax volcanii (strain ATCC 29605

Query: 2 EVGLHEM 8
+VGLHEM
Sbjct: 77 DVGLHEM 83


>sp|ARCC_THEAC|CARBAMATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 GLHEMHI 10
GLHE+H+
Sbjct: 242 GLHEVHV 248


>sp|GATB_METJA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanocaldococcus jannaschii (strain

Query: 3 VGLHEMHI 10
+G+HE+H+
Sbjct: 115 IGIHEVHL 122


>sp|RL3_THEKO|LARGE ribosomal subunit protein uL3|Thermococcus kodakarensis (strain

Query: 1 TEVGLHEMH 9
TEV H++H
Sbjct: 97 TEVWFHDLH 105


>sp|FAU1_STAMF|PROBABLE ribonuclease FAU-1|Staphylothermus marinus (strain ATCC 43588

Query: 1 TEVGLHEMHI 10
+ VGLH +H+
Sbjct: 86 SPVGLHSIHL 95


>sp|PYRH_METKA|URIDYLATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 3 VGLHEMHI 10
+GLH++H+
Sbjct: 83 LGLHDLHV 90


>sp|FERA_SULME|ZINC-CONTAINING ferredoxin A|Sulfuracidifex metallicus (Sulfolobus metallicus)

Query: 2 EVGLHEMH 9
EVG HE H
Sbjct: 12 EVGTHEGH 19




360|Sequence|1796|1805|HEMHIKYMGS

>sp|ACDA1_METBF|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina barkeri

Query: 2 EMHIKYMGS 10
E+H KY+GS
Sbjct: 732 ELHKKYLGS 740


>sp|R1PKD_THEKO|ADP-DEPENDENT ribose-1-phosphate kinase|Thermococcus kodakarensis (strain ATCC

Query: 2 EMHIKY 7
EMHIKY
Sbjct: 69 EMHIKY 74


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 2 EMHIKYMG 9
E HIKY+G
Sbjct: 704 EWHIKYVG 711


>sp|Y060_ARCFU|UNCHARACTERIZED protein AF_0060|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EMHIKYM 8
EMH KYM
Sbjct: 13 EMHAKYM 19


>sp|RS4_METMA|SMALL ribosomal subunit protein uS4|Methanosarcina mazei (strain ATCC

Query: 2 EMHIKYMGS 10
EMHI Y GS
Sbjct: 158 EMHIGYYGS 166


>sp|ACDA2_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 2 EMHIKYMG 9
E+H KY+G
Sbjct: 732 ELHKKYLG 739


>sp|ACDA1_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 EMHIKYMG 9
E+H KY+G
Sbjct: 732 ELHKKYLG 739


>sp|TSR3_HALSA|16S rRNA aminocarboxypropyltransferase|Halobacterium salinarum

Query: 2 EMHIKYMG 9
E+H++Y G
Sbjct: 2 ELHVRYEG 9


>sp|TSR3_HALS3|16S rRNA aminocarboxypropyltransferase|Halobacterium salinarum

Query: 2 EMHIKYMG 9
E+H++Y G
Sbjct: 2 ELHVRYEG 9


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 2 EMHIKYMG 9
E+H KY+G
Sbjct: 732 ELHDKYIG 739


>sp|DPOL1_SULOH|DNA polymerase 1|Sulfurisphaera ohwakuensis

Query: 1 HEMHIKYMGS 10
+E HIKY +
Sbjct: 152 YEAHIKYFNN 161


>sp|DPOL1_SACS2|DNA polymerase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 HEMHIKYMGS 10
+E HIKY +
Sbjct: 152 YEAHIKYFNN 161


>sp|DPOL1_SULAC|DNA polymerase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 HEMHIKY 7
+E HIKY
Sbjct: 151 YEAHIKY 157


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 2 EMHIKYMGS 10
++H KY+G+
Sbjct: 726 DLHRKYLGT 734


>sp|AATI_METJA|A-TYPE ATP synthase subunit I|Methanocaldococcus jannaschii (strain ATCC

Query: 2 EMHIKYMGS 10
E +KY+GS
Sbjct: 153 EFDLKYLGS 161


>sp|CBID_THEVO|COBALT-PRECORRIN-5B C(1)-methyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 HEMHIKYM 8
+E+H+KY+
Sbjct: 195 YELHLKYI 202


>sp|Y3407_METJA|UNCHARACTERIZED protein MJECS07|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EMHIKYMGS 10
++HIK+ GS
Sbjct: 146 DIHIKFSGS 154


>sp|RS4_METAC|SMALL ribosomal subunit protein uS4|Methanosarcina acetivorans (strain

Query: 2 EMHIKYMGS 10
EMHI Y G+
Sbjct: 157 EMHIGYYGN 165


>sp|SYT_META3|THREONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 HEMHIKYMG 9
HEM IK+ G
Sbjct: 191 HEMGIKHGG 199




361|Sequence|1801|1810|KYMGSHIPES

>sp|GCSPA_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 2 YMGSHIPE 9
Y+GSH PE
Sbjct: 413 YVGSHFPE 420


>sp|MCRC_METBF|METHYL-COENZYME M reductase operon protein|Methanosarcina barkeri (strain Fusaro

Query: 2 YMGSHIPES 10
Y GS IPES
Sbjct: 74 YSGSGIPES 82


>sp|PUS10_METJA|TRNA pseudouridine synthase Pus10|Methanocaldococcus jannaschii (strain

Query: 3 MGSHIPE 9
+G+HIPE
Sbjct: 139 IGTHIPE 145


>sp|UREE_NATPD|UREASE accessory protein UreE|Natronomonas pharaonis (strain ATCC 35678

Query: 3 MGSHIPES 10
+G HIP+S
Sbjct: 139 LGEHIPDS 146


>sp|NADE_METMA|NH(3)-DEPENDENT NAD(+) synthetase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KYMGSHIPES 10
+ +G H+PES
Sbjct: 51 RVLGIHMPES 60


>sp|GCSPA_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 2 YMGSHIPE 9
Y+G H PE
Sbjct: 412 YIGKHFPE 419


>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KYMGSHIPES 10
KY G H+ E+
Sbjct: 355 KYAGKHVKEA 364


>sp|NADE_METAC|NH(3)-DEPENDENT NAD(+) synthetase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KYMGSHIPES 10
+ +G H+PES
Sbjct: 51 RVLGLHMPES 60


>sp|GCSPA_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 2 YMGSHIPE 9
Y+G H PE
Sbjct: 413 YVGKHFPE 420


>sp|HELS_METAR|ATP-DEPENDENT DNA helicase Hel308|Methanocella arvoryzae (strain DSM 22066

Query: 2 YMGSHIPE 9
Y GS IPE
Sbjct: 16 YTGSGIPE 23


>sp|FENR_PICTO|FERREDOXIN--NADP reductase|Picrophilus torridus (strain ATCC 700027

Query: 2 YMGSHIPE 9
Y+G IPE
Sbjct: 37 YVGGQIPE 44


>sp|Y584_METJA|UPF0718 protein MJ0584|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KYMGSHIPE 9
KY GS+ P+
Sbjct: 53 KYFGSNTPK 61


>sp|SYR_METJA|ARGININE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KYMGSHIPE 9
K +GS +PE
Sbjct: 352 KLLGSKVPE 360


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 2 YMGSHIPE 9
Y+G ++PE
Sbjct: 404 YIGKYVPE 411


>sp|RS24_THESM|SMALL ribosomal subunit protein eS24|Thermococcus sibiricus (strain DSM

Query: 2 YMGSHIPE 9
Y GSH+ E
Sbjct: 59 YFGSHVSE 66


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KYMGSHIPE 9
KY G IPE
Sbjct: 302 KYEGMSIPE 310


>sp|SYFA_METMJ|PHENYLALANINE--TRNA ligase alpha subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 YMGSHIPE 9
YMG +PE
Sbjct: 68 YMGKGLPE 75


>sp|PGMI_THEVO|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Thermoplasma volcanium

Query: 2 YMGSHIP 8
Y G HIP
Sbjct: 169 YNGEHIP 175




362|Sequence|1806|1815|HIPESPLQFY

>sp|PYRH_METKA|URIDYLATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 HIPESPLQ 8
H+PE+P++
Sbjct: 89 HVPETPVE 96


>sp|COFH2_METBF|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina barkeri (strain Fusaro

Query: 1 HIPESPLQFY 10
+IPE+ ++FY
Sbjct: 110 YIPEADIEFY 119


>sp|LHRC_SULAC|ATP-DEPENDENT helicase Lhr-Core|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 HIPESPL 7
H+PE+PL
Sbjct: 414 HVPENPL 420


>sp|SYA_META3|ALANINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 IPESPLQFY 10
IPE+ L FY
Sbjct: 517 IPETELLFY 525


>sp|YSO2_ACIAM|UNCHARACTERIZED transporter in sor 3'region|Acidianus ambivalens (Desulfurolobus

Query: 5 SPLQFY 10
SP+QFY
Sbjct: 152 SPIQFY 157


>sp|PURL_META3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 PESPLQFY 10
PE P +FY
Sbjct: 492 PEKPERFY 499


>sp|LHRC_SACS2|ATP-DEPENDENT helicase Lhr-Core|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 HIPESPL 7
HIP++PL
Sbjct: 412 HIPKNPL 418


>sp|PRIL_SULTO|DNA primase large subunit PriL|Sulfurisphaera tokodaii (strain DSM

Query: 5 SPLQFY 10
+PLQFY
Sbjct: 296 NPLQFY 301


>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 IPESPLQFY 10
+PE+ L FY
Sbjct: 502 LPETELAFY 510


>sp|Y2119_ARCFU|UNCHARACTERIZED protein AF_2119|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IPESPLQFY 10
+P+ P++FY
Sbjct: 221 VPDYPVKFY 229


>sp|COFH2_METMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina mazei (strain ATCC

Query: 1 HIPESPLQFY 10
+ PE+ ++FY
Sbjct: 110 YTPEADMEFY 119


>sp|COFH2_METAC|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina acetivorans (strain

Query: 1 HIPESPLQFY 10
+ PE+ ++FY
Sbjct: 110 YTPEADMEFY 119


>sp|AGO_PYRFU|PROTEIN argonaute|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PESPLQFY 10
PE+ L+FY
Sbjct: 225 PEAKLEFY 232


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 HIPESPLQFY 10
H+P++ +FY
Sbjct: 507 HLPKTKRRFY 516


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 HIPESPLQFY 10
H+P++ +FY
Sbjct: 507 HLPKTKRRFY 516


>sp|Y064_ARCFU|UNCHARACTERIZED protein AF_0064|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IPESPLQFY 10
I E PL+FY
Sbjct: 78 ISEPPLEFY 86


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 HIPESPLQFY 10
H+PE+ FY
Sbjct: 509 HLPETRKLFY 518


>sp|AGLU_SACS9|ALPHA-GLUCOSIDASE solfataricus (strain 98/2) (Sulfolobus

Query: 2 IPESPLQFY 10
IPE ++FY
Sbjct: 140 IPEDSVEFY 148


>sp|AGLU_SACS2|ALPHA-GLUCOSIDASE solfataricus (strain ATCC 35092

Query: 2 IPESPLQFY 10
IPE ++FY
Sbjct: 140 IPEDSVEFY 148


>sp|Y304_ARCFU|UNCHARACTERIZED protein AF_0304|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HIPESPLQFY 10
++PE+ L+F+
Sbjct: 253 YLPEANLEFF 262




363|Sequence|1811|1820|PLQFYVNYPN

>sp|Y1626_METJA|UNCHARACTERIZED protein MJ1626|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LQFYVNYPN 10
L+F+ NYPN
Sbjct: 646 LEFFKNYPN 654


>sp|SYFA_METM7|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain C7 /

Query: 4 FYVNYPN 10
F+V YPN
Sbjct: 285 FFVKYPN 291


>sp|SYFA_METM5|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain C5 /

Query: 4 FYVNYPN 10
F+V YPN
Sbjct: 285 FFVKYPN 291


>sp|SYFA_METMP|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain DSM 14266

Query: 4 FYVNYPN 10
F+V YPN
Sbjct: 285 FFVKYPN 291


>sp|DAPAT_METMP|LL-DIAMINOPIMELATE aminotransferase|Methanococcus maripaludis (strain DSM 14266

Query: 4 FYVNYPN 10
Y+NYPN
Sbjct: 183 LYLNYPN 189


>sp|FDHD_SULAC|SULFUR carrier protein FdhD|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PLQFYVNYPN 10
PLQ +VN N
Sbjct: 28 PLQIFVNEKN 37


>sp|GSA1_CENSY|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase 1|Cenarchaeum symbiosum (strain A)

Query: 1 PLQFYVNYP 9
P+++Y YP
Sbjct: 21 PVRYYAPYP 29


>sp|YSO2_ACIAM|UNCHARACTERIZED transporter in sor 3'region|Acidianus ambivalens (Desulfurolobus

Query: 1 PLQFYVNY 8
P+QFY Y
Sbjct: 153 PIQFYFKY 160


>sp|Y1804_AERPE|UNCHARACTERIZED protein APE_1804|Aeropyrum pernix (strain ATCC 700893

Query: 1 PLQFYVNYPN 10
P +FY +PN
Sbjct: 38 PYKFYWGFPN 47


>sp|DAPAT_METJA|LL-DIAMINOPIMELATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 FYVNYPN 10
Y+NYPN
Sbjct: 183 LYLNYPN 189


>sp|RIFK_METBF|RIBOFLAVIN kinase|Methanosarcina barkeri (strain Fusaro /

Query: 3 QFYVNYP 9
Q+YVN P
Sbjct: 104 QYYVNIP 110


>sp|APGM_SACI7|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 PLQFYVNYP 9
P+ YV YP
Sbjct: 364 PILLYVPYP 372


>sp|APGM_SACI6|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 PLQFYVNYP 9
P+ YV YP
Sbjct: 364 PILLYVPYP 372


>sp|APGM_SACI4|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 PLQFYVNYP 9
P+ YV YP
Sbjct: 364 PILLYVPYP 372


>sp|APGM_SACI3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.16.27)

Query: 1 PLQFYVNYP 9
P+ YV YP
Sbjct: 364 PILLYVPYP 372


>sp|APGM_SACI2|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 PLQFYVNYP 9
P+ YV YP
Sbjct: 364 PILLYVPYP 372


>sp|APGM_SACI1|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 PLQFYVNYP 9
P+ YV YP
Sbjct: 364 PILLYVPYP 372


>sp|RIFK_METAC|RIBOFLAVIN kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 QFYVNYP 9
Q+Y+N P
Sbjct: 116 QYYINIP 122


>sp|RIFK_METMA|RIBOFLAVIN kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 QFYVNYP 9
Q+Y+N P
Sbjct: 104 QYYINIP 110


>sp|AGLB2_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LQFYVNYP 9
+Y+NYP
Sbjct: 63 FDYYINYP 70


>sp|Y2423_ARCFU|UNCHARACTERIZED protein AF_2423|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PLQFYVNYP 9
PL++++ YP
Sbjct: 25 PLRYFIPYP 33


>sp|Y1384_METJA|PUTATIVE nitroreductase MJ1384|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PLQFYVN 7
PL+ YVN
Sbjct: 67 PLEIYVN 73


>sp|GGR_SULAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 QFYVNYP 9
+ Y+NYP
Sbjct: 421 ELYLNYP 427


>sp|ASRAC_PYRHO|ALANINE/SERINE racemase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PLQFYVNYPN 10
P F++ YPN
Sbjct: 192 PNVFWIPYPN 201


>sp|HIS1_ARCFU|ATP phosphoribosyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LQFYVNYPN 10
+ FY N PN
Sbjct: 183 VSFYFNVPN 191


>sp|LONH_THEVO|PUTATIVE lon protease homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LQFYVNYPN 10
L FY+ PN
Sbjct: 65 LSFYIGRPN 73


>sp|SYR_METST|ARGININE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 LQFYVNY 8
+ FY+NY
Sbjct: 84 INFYINY 90


>sp|Y101_METAC|PUTATIVE RNase MA_0101|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PLQFYVNYPN 10
PL+ NYP+
Sbjct: 58 PLEIKENYPS 67


>sp|SYM_METMJ|METHIONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PLQFYVNY 8
P FYV Y
Sbjct: 29 PADFYVRY 36


>sp|Y1676_SACI1|UPF0201 protein YN1551_1676|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 LQFYVNYPN 10
++FY+ Y N
Sbjct: 110 IKFYIEYQN 118


>sp|Y1276_SACI2|UPF0201 protein LS215_1276|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 LQFYVNYPN 10
++FY+ Y N
Sbjct: 110 IKFYIEYQN 118


>sp|Y1175_SACI7|UPF0201 protein YG5714_1175|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 LQFYVNYPN 10
++FY+ Y N
Sbjct: 110 IKFYIEYQN 118


>sp|Y1042_SACS2|UPF0201 protein SSO1042|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LQFYVNYPN 10
++FY+ Y N
Sbjct: 110 IKFYIEYQN 118


>sp|ARLMC_PYRHO|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus horikoshii

Query: 1 PLQFYVNYPN 10
PL+F ++Y N
Sbjct: 371 PLRFILDYRN 380


>sp|AGLB1_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 FYVNYP 9
+Y+NYP
Sbjct: 58 YYINYP 63


>sp|Y1109_ARCFU|UNCHARACTERIZED protein AF_1109|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 FYVNYPN 10
+YV+YP+
Sbjct: 101 YYVDYPD 107


>sp|Y1243_SACI3|UPF0201 protein M1627_1243|Saccharolobus islandicus (strain M.16.27)

Query: 2 LQFYVNYPN 10
++FY+ Y N
Sbjct: 110 IKFYIEYQN 118


>sp|Y1179_SACI4|UPF0201 protein M1425_1179|Saccharolobus islandicus (strain M.14.25 /

Query: 2 LQFYVNYPN 10
++FY+ Y N
Sbjct: 110 IKFYIEYQN 118


>sp|Y1168_SACI6|UPF0201 protein M164_1168|Saccharolobus islandicus (strain M.16.4 /

Query: 2 LQFYVNYPN 10
++FY+ Y N
Sbjct: 110 IKFYIEYQN 118


>sp|DPOL_METVO|DNA polymerase|Methanococcus voltae

Query: 3 QFYVNYPN 10
+ YV YPN
Sbjct: 117 KVYVKYPN 124




364|Sequence|1816|1825|VNYPNSGSVS

>sp|SYFA_METM5|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain C5 /

Query: 1 VNYPNSGSV 9
V YPN+G+V
Sbjct: 287 VKYPNTGTV 295


>sp|SYFA_METMP|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain DSM 14266

Query: 1 VNYPNSGSV 9
V YPN+G V
Sbjct: 287 VKYPNTGKV 295


>sp|SYFA_METM7|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain C7 /

Query: 1 VNYPNSGSV 9
V YPN+G V
Sbjct: 287 VKYPNTGIV 295


>sp|Y1422_METBF|MEMO1 family protein Mbar_A1422|Methanosarcina barkeri (strain Fusaro /

Query: 1 VNYPNSGSVS 10
+NY NSG VS
Sbjct: 241 LNYSNSGEVS 250


>sp|Y612_ARCFU|UNCHARACTERIZED protein AF_0612|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VNYPNSGSV 9
V +P SGSV
Sbjct: 20 VKFPESGSV 28


>sp|Y1464_METJA|UNCHARACTERIZED GTP-binding protein MJ1464|Methanocaldococcus jannaschii (strain

Query: 1 VNYPNSGSVS 10
V YPN G S
Sbjct: 116 VGYPNVGKSS 125


>sp|AAT_THEKO|ASPARTATE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VNYPNS 6
+NYPN+
Sbjct: 138 INYPNN 143


>sp|SYFA_METJA|PHENYLALANINE--TRNA ligase alpha subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VNYPNSGSV 9
+ YPN G +
Sbjct: 281 LKYPNEGDI 289


>sp|AAT_PYRHO|ASPARTATE aminotransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VNYPNS 6
+NYPN+
Sbjct: 171 INYPNN 176


>sp|HFLX_SACS2|GTPASE HflX|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VNYPNSGSVS 10
V Y NSG S
Sbjct: 185 VGYTNSGKTS 194




365|Sequence|1821|1830|SGSVSAYGPG

>sp|PELO_HALMA|PROTEIN pelota homolog|Haloarcula marismortui (strain ATCC 43049

Query: 1 SGSVSAYGP 9
SGS AYGP
Sbjct: 269 SGSEVAYGP 277


>sp|LYSK_AERPE|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Aeropyrum pernix (strain

Query: 3 SVSAYGPG 10
S++AYGPG
Sbjct: 308 SIAAYGPG 315


>sp|GATA_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C5 /

Query: 1 SGSVSAYGP 9
SG S YGP
Sbjct: 108 SGETSCYGP 116


>sp|GATA_METMP|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain DSM

Query: 1 SGSVSAYGP 9
SG S YGP
Sbjct: 108 SGETSCYGP 116


>sp|FBPAP_METJA|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 SGSVSAYGPG 10
SG+V GPG
Sbjct: 107 SGNVRGMGPG 116


>sp|COBQ_METBF|PROBABLE cobyric acid synthase|Methanosarcina barkeri (strain Fusaro /

Query: 4 VSAYGP 9
VSAYGP
Sbjct: 377 VSAYGP 382


>sp|PSB_ARCFU|PROTEASOME subunit beta|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SGSVSAYG 8
SGS++AYG
Sbjct: 142 SGSLTAYG 149


>sp|FBPAP_SULTO|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 SGSVSAYGPG 10
SG+V GPG
Sbjct: 102 SGNVRGLGPG 111


>sp|FBPAP_THEKO|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 SGSVSAYGPG 10
SG+V GPG
Sbjct: 106 SGNVRGMGPG 115


>sp|FBPAP_METTM|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Methanothermobacter marburgensis (strain ATCC

Query: 1 SGSVSAYGPG 10
SG++ GPG
Sbjct: 102 SGNIKGMGPG 111


>sp|PRIS_HALLT|DNA primase small subunit PriS|Halorubrum lacusprofundi (strain ATCC

Query: 2 GSVSAYGPG 10
G+V A GPG
Sbjct: 260 GNVEAGGPG 268


>sp|PSB_METLZ|PROTEASOME subunit beta|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 SGSVSAYG 8
SGS++AYG
Sbjct: 142 SGSLTAYG 149


>sp|HIS8_METBU|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcoides burtonii (strain DSM 6242

Query: 2 GSVSAYGPG 10
GS++ Y PG
Sbjct: 12 GSIAKYVPG 20


>sp|FBPAP_THEON|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Thermococcus onnurineus (strain NA1)

Query: 1 SGSVSAYGPG 10
SG++ GPG
Sbjct: 106 SGNIRGMGPG 115


>sp|PSB_METS3|PROTEASOME subunit beta|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 SGSVSAYG 8
SGS+ AYG
Sbjct: 135 SGSIVAYG 142


>sp|DP2S_ARCFU|DNA polymerase II small subunit|Archaeoglobus fulgidus (strain ATCC

Query: 2 GSVSAYGPG 10
G+V+ Y PG
Sbjct: 469 GNVAVYRPG 477




366|Sequence|1826|1835|AYGPGLVYGV

>sp|RPO3_THEKO|DNA-DIRECTED RNA polymerase subunit Rpo3|Thermococcus kodakarensis (strain ATCC

Query: 1 AYGPGLVY 8
A GPG+VY
Sbjct: 93 AEGPGMVY 100


>sp|Y866_ARCFU|UNCHARACTERIZED sugar kinase AF_0866|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 PGLVYGV 10
PGL+YG+
Sbjct: 362 PGLLYGI 368


>sp|RPO3_PYRHO|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrococcus horikoshii (strain ATCC

Query: 1 AYGPGLVY 8
A GPG+VY
Sbjct: 93 AEGPGIVY 100


>sp|RPO3_PYRAB|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrococcus abyssi (strain GE5 /

Query: 1 AYGPGLVY 8
A GPG+VY
Sbjct: 93 AEGPGIVY 100


>sp|RPO3_PYRFU|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AYGPGLVY 8
A GPG+VY
Sbjct: 95 AEGPGIVY 102


>sp|FKBPL_METJA|LONG-TYPE peptidyl-prolyl cis-trans isomerase|Methanocaldococcus jannaschii

Query: 2 YGPGLVYG 9
Y P ++YG
Sbjct: 35 YNPAMIYG 42


>sp|Y2023_ARCFU|UNCHARACTERIZED protein AF_2023|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AYGPGLV 7
AYGP L+
Sbjct: 174 AYGPALI 180


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 2 YGPGLV 7
YGPG+V
Sbjct: 780 YGPGIV 785


>sp|RPO3_METTH|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanothermobacter thermautotrophicus

Query: 3 GPGLVY 8
GPG+VY
Sbjct: 102 GPGVVY 107


>sp|RPO3_METMA|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosarcina mazei (strain ATCC

Query: 1 AYGPGLVY 8
A GPG VY
Sbjct: 101 AEGPGTVY 108


>sp|RPO3_METAC|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosarcina acetivorans (strain ATCC

Query: 1 AYGPGLVY 8
A GPG VY
Sbjct: 101 AEGPGTVY 108


>sp|SEPS_METTP|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 AYGPGLV 7
AY PGLV
Sbjct: 287 AYHPGLV 293


>sp|HELS_THEAC|ATP-DEPENDENT DNA helicase Hel308|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 YGPGLVY 8
YG GL+Y
Sbjct: 368 YGIGLIY 374


>sp|GATE_SACS2|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus solfataricus (strain ATCC

Query: 5 GLVYGV 10
GLVYG+
Sbjct: 306 GLVYGI 311


>sp|GATE_SACI7|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 5 GLVYGV 10
GLVYG+
Sbjct: 306 GLVYGI 311


>sp|GATE_SACI6|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain M.16.4

Query: 5 GLVYGV 10
GLVYG+
Sbjct: 306 GLVYGI 311


>sp|GATE_SACI4|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain M.14.25

Query: 5 GLVYGV 10
GLVYG+
Sbjct: 306 GLVYGI 311


>sp|GATE_SACI3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 5 GLVYGV 10
GLVYG+
Sbjct: 306 GLVYGI 311


>sp|GATE_SACI2|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 5 GLVYGV 10
GLVYG+
Sbjct: 306 GLVYGI 311


>sp|GATE_SACI1|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 5 GLVYGV 10
GLVYG+
Sbjct: 306 GLVYGI 311


>sp|SYL_METKA|LEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 YGPGLVYGV 10
+G G+VY V
Sbjct: 302 FGTGVVYSV 310


>sp|AATA_SULAC|A-TYPE ATP synthase subunit A|Sulfolobus acidocaldarius (strain ATCC

Query: 3 GPGLVYGV 10
GPGL+ G+
Sbjct: 77 GPGLMGGI 84


>sp|LYEL_HALJT|LYCOPENE elongase/hydratase|Haloarcula japonica (strain ATCC 49778

Query: 4 PGLVYGV 10
PGLV+G+
Sbjct: 252 PGLVFGI 258


>sp|Y1286_METJA|UNCHARACTERIZED protein MJ1286|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 GLVYGV 10
GLVYG+
Sbjct: 294 GLVYGI 299


>sp|G1PDH_HYPBU|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Hyperthermus butylicus (strain DSM 5456

Query: 1 AYGPGLVYG 9
AY P LV G
Sbjct: 83 AYSPSLVVG 91




367|Sequence|1831|1840|LVYGVANKTA

>sp|CYAS_METBU|CYSTEATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 LVYGVANKTA 10
++YG+ NK A
Sbjct: 316 IIYGITNKEA 325


>sp|CFBE_METBF|COENZYME F(430) synthetase|Methanosarcina barkeri (strain Fusaro /

Query: 3 YGVANKTA 10
YG+AN TA
Sbjct: 211 YGIANNTA 218


>sp|HIS8_METJA|HISTIDINOL-PHOSPHATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YGVANK 8
YGVANK
Sbjct: 242 YGVANK 247


>sp|RRP4_METBU|EXOSOME complex component Rrp4|Methanococcoides burtonii (strain DSM 6242

Query: 1 LVYGVAN 7
L+YG+AN
Sbjct: 33 LLYGIAN 39


>sp|CFBE_METAC|COENZYME F(430) synthetase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 YGVANKTA 10
YG+AN T+
Sbjct: 211 YGIANNTS 218


>sp|Y106_METJA|UNCHARACTERIZED protein MJ0106|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VYGVANK 8
V+G+ANK
Sbjct: 125 VFGIANK 131


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VYGVANKT 9
VYG+ N T
Sbjct: 548 VYGIINNT 555




368|Sequence|1836|1845|ANKTATFTIV

>sp|RS4E_HALMA|SMALL ribosomal subunit protein eS4|Haloarcula marismortui (strain ATCC

Query: 3 KTATFTI 9
KTATFT+
Sbjct: 19 KTATFTV 25


>sp|DOXA_ACIAM|THIOSULFATE dehydrogenase [quinone] small subunit|Acidianus ambivalens

Query: 1 ANKTATFTI 9
A +TATFTI
Sbjct: 159 AKQTATFTI 167




369|Sequence|1841|1850|TFTIVTEDAG

>sp|IF2P_METM6|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 2 FTIVTEDAG 10
FTI+T+D G
Sbjct: 348 FTILTDDEG 356


>sp|IF2P_METMP|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 2 FTIVTEDAG 10
FTI+T+D G
Sbjct: 348 FTILTDDEG 356


>sp|IF2P_METM5|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 2 FTIVTEDAG 10
FTI+T+D G
Sbjct: 348 FTILTDDEG 356


>sp|IF2P_METM7|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 2 FTIVTEDAG 10
FTI+T+D G
Sbjct: 348 FTILTDDEG 356


>sp|SPEE_THEVO|POLYAMINE aminopropyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 TFTIVTEDA 9
+FTI +EDA
Sbjct: 232 SFTIASEDA 240


>sp|HTR1_HALSA|SENSORY rhodopsin I transducer|Halobacterium salinarum (strain ATCC 700922

Query: 1 TFTIVTEDA 9
+FT+ TED+
Sbjct: 507 SFTVATEDS 515


>sp|HTR1_HALS3|SENSORY rhodopsin I transducer|Halobacterium salinarum (strain ATCC 29341

Query: 1 TFTIVTEDA 9
+FT+ TED+
Sbjct: 507 SFTVATEDS 515


>sp|PCNA2_AERPE|DNA polymerase sliding clamp 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 TFTIVTED 8
+FTI+T+D
Sbjct: 136 SFTILTDD 143




370|Sequence|1846|1855|TEDAGEGGLD

>sp|PYRG_METJA|CTP synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TEDAGEGGLD 10
TED GE LD
Sbjct: 64 TEDGGESDLD 73


>sp|PYRG_AERPE|CTP synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 TEDAGEGGLD 10
TED GE LD
Sbjct: 64 TEDGGETDLD 73


>sp|Y4659_METAC|UPF0201 protein MA_4659|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 GEGGLD 10
GEGGLD
Sbjct: 59 GEGGLD 64


>sp|AROD_SACS2|3-DEHYDROQUINATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 DAGEGGLD 10
D GEGG++
Sbjct: 64 DKGEGGIN 71


>sp|FLAB5_PYRHO|FLAGELLIN B5|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 TEDAGEGGLD 10
T +AG GG+D
Sbjct: 81 TPNAGSGGID 90


>sp|CBIJ_METJA|COBALT-PRECORRIN-6A reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TEDAGEGG 8
T+D+GE G
Sbjct: 197 TKDSGESG 204


>sp|LONB_HALSA|ARCHAEAL Lon protease|Halobacterium salinarum (strain ATCC 700922

Query: 4 AGEGGLD 10
AGEGG+D
Sbjct: 565 AGEGGVD 571


>sp|HIS5_METTH|IMIDAZOLE glycerol phosphate synthase subunit|Methanothermobacter

Query: 2 EDAGEGGLD 10
E +GE GLD
Sbjct: 179 EKSGEAGLD 187




371|Sequence|1851|1860|EGGLDLAIEG

>sp|RRP41_METTH|EXOSOME complex component Rrp41|Methanothermobacter thermautotrophicus

Query: 1 EGGLDLAIEG 10
E LDLA+EG
Sbjct: 213 ERALDLAVEG 222


>sp|Y875_METJA|UNCHARACTERIZED protein MJ0875|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EGGLDLAIE 9
EG LD AIE
Sbjct: 171 EGNLDKAIE 179


>sp|DCD_PYRAR|DCTP deaminase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 EGGLDLAIEG 10
E GLDL I G
Sbjct: 29 ENGLDLRIGG 38


>sp|Y3524_METAC|PUTATIVE HTH-type transcriptional regulatory protein|Methanosarcina

Query: 2 GGLDLAIEG 10
GGL ++IEG
Sbjct: 121 GGLYISIEG 129


>sp|NADM_PYRAE|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EGGLDLA 7
EGG+DL+
Sbjct: 63 EGGIDLS 69


>sp|FTHS_THEAC|FORMATE--TETRAHYDROFOLATE ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EGGLDLA 7
EGG+DLA
Sbjct: 397 EGGIDLA 403


>sp|DCD_PYRAE|DCTP deaminase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EGGLDLAIEG 10
E GLDL I G
Sbjct: 29 ENGLDLRIGG 38


>sp|Y2318_METBF|PUTATIVE HTH-type transcriptional regulatory protein|Methanosarcina barkeri

Query: 2 GGLDLAIEG 10
GGL ++IEG
Sbjct: 121 GGLYVSIEG 129


>sp|SECY_METVA|PROTEIN translocase subunit SecY|Methanococcus vannielii

Query: 2 GGLDLAIEG 10
G LD+AI+G
Sbjct: 351 GNLDMAIKG 359


>sp|PSB2_PYRAE|PROTEASOME subunit beta 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GGLDLAI 8
GG+DLAI
Sbjct: 180 GGIDLAI 186


>sp|Y4659_METAC|UPF0201 protein MA_4659|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EGGLDL 6
EGGLDL
Sbjct: 60 EGGLDL 65


>sp|DCD_PYRCJ|DCTP deaminase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 EGGLDLAIEG 10
E GLDL I G
Sbjct: 29 ENGLDLRIGG 38


>sp|Y444_METMA|PUTATIVE HTH-type transcriptional regulatory protein|Methanosarcina mazei

Query: 2 GGLDLAIEG 10
GGL ++IEG
Sbjct: 121 GGLYVSIEG 129


>sp|DCD_PYRNV|DCTP deaminase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 EGGLDLAIEG 10
E GLDL I G
Sbjct: 29 ENGLDLRIGG 38


>sp|DCD_PYRIL|DCTP deaminase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 EGGLDLAIEG 10
E GLDL I G
Sbjct: 29 ENGLDLRIGG 38




372|Sequence|1856|1865|LAIEGPSKAE

>sp|Y995_META3|UPF0288 protein Maeo_0995|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 IEGPSKA 9
+EGPSKA
Sbjct: 204 LEGPSKA 210


>sp|PCNA2_SULOH|DNA polymerase sliding clamp 2|Sulfurisphaera ohwakuensis

Query: 1 LAIEGPSKA 9
L IE PSKA
Sbjct: 190 LNIESPSKA 198


>sp|DHYS_PYRAB|PROBABLE deoxyhypusine synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 LAIEGP 6
LAIEGP
Sbjct: 17 LAIEGP 22


>sp|RL32_HALSA|LARGE ribosomal subunit protein eL32|Halobacterium salinarum (strain

Query: 5 GPSKAE 10
GPSKAE
Sbjct: 18 GPSKAE 23


>sp|IF2P_METS5|PROBABLE translation initiation factor IF-2|Metallosphaera sedula (strain

Query: 2 AIEGPSK 8
A+EGP+K
Sbjct: 231 AVEGPAK 237


>sp|PCNA2_SULTO|DNA polymerase sliding clamp 2|Sulfurisphaera tokodaii (strain DSM

Query: 1 LAIEGPSKA 9
L +E PSKA
Sbjct: 190 LNVESPSKA 198




373|Sequence|1861|1870|PSKAEISCID

>sp|AROD_METS5|3-DEHYDROQUINATE dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 1 PSKAEISCI 9
PS+ E+ C+
Sbjct: 114 PSREEVDCL 122


>sp|DPM1L_HALVD|DOLICHYL-PHOSPHATE hexose transferase HVO_1613|Haloferax volcanii (strain ATCC 29605

Query: 3 KAEISCID 10
+AE+ C+D
Sbjct: 36 RAEVVCVD 43




374|Sequence|1866|1875|ISCIDNKDGT

>sp|HIS6_IGNH4|IMIDAZOLE glycerol phosphate synthase subunit|Ignicoccus hospitalis (strain

Query: 1 ISCIDNKDG 9
I C+D KDG
Sbjct: 8 IPCLDVKDG 16


>sp|HIS6_METS5|IMIDAZOLE glycerol phosphate synthase subunit|Metallosphaera sedula (strain

Query: 1 ISCIDNKDG 9
I+C+D KDG
Sbjct: 7 IACLDVKDG 15


>sp|HIS6_METKA|IMIDAZOLE glycerol phosphate synthase subunit|Methanopyrus kandleri (strain

Query: 1 ISCIDNKDG 9
I C+D KDG
Sbjct: 8 IPCLDVKDG 16


>sp|HIS6_SACS2|IMIDAZOLE glycerol phosphate synthase subunit|Saccharolobus solfataricus

Query: 1 ISCIDNKDG 9
I+C+D KDG
Sbjct: 7 IACLDVKDG 15


>sp|HIS6_METMJ|IMIDAZOLE glycerol phosphate synthase subunit|Methanoculleus marisnigri

Query: 1 ISCIDNKDG 9
I C+D KDG
Sbjct: 8 IPCLDLKDG 16


>sp|SEPS_METM5|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C5 /

Query: 2 SCIDNKD 8
SC+ NKD
Sbjct: 378 SCVKNKD 384


>sp|SEPS_METM7|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C7 /

Query: 2 SCIDNKD 8
SC+ NKD
Sbjct: 378 SCVKNKD 384


>sp|SEPS_METMP|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 SCIDNKD 8
SC+ NKD
Sbjct: 378 SCVKNKD 384


>sp|HIS6_METB6|IMIDAZOLE glycerol phosphate synthase subunit|Methanoregula boonei (strain

Query: 1 ISCIDNKDG 9
I C+D KDG
Sbjct: 8 IPCLDLKDG 16


>sp|HIS6_METHJ|IMIDAZOLE glycerol phosphate synthase subunit|Methanospirillum hungatei

Query: 1 ISCIDNKDG 9
I C+D KDG
Sbjct: 8 IPCLDIKDG 16


>sp|HIS6_SULAC|IMIDAZOLE glycerol phosphate synthase subunit|Sulfolobus acidocaldarius

Query: 1 ISCIDNKDG 9
I C+D KDG
Sbjct: 7 IPCLDVKDG 15


>sp|HIS6_METJA|IMIDAZOLE glycerol phosphate synthase subunit|Methanocaldococcus jannaschii

Query: 1 ISCIDNKDG 9
I C+D KDG
Sbjct: 7 IPCLDIKDG 15


>sp|HIS6_METPE|IMIDAZOLE glycerol phosphate synthase subunit|Methanosphaerula palustris

Query: 1 ISCIDNKDG 9
I C+D KDG
Sbjct: 8 IPCLDLKDG 16


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 1 ISCIDNKD 8
I+CI+N D
Sbjct: 229 IACIENLD 236


>sp|CARB_SULAC|CARBAMOYL phosphate synthase large chain|Sulfolobus acidocaldarius (strain

Query: 1 ISCIDNKD 8
I+CI+N D
Sbjct: 229 IACIENLD 236


>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 1 ISCIDNKD 8
I+CI+N D
Sbjct: 229 IACIENLD 236


>sp|CARB_SACI7|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 ISCIDNKD 8
I+CI+N D
Sbjct: 229 IACIENLD 236


>sp|CARB_SACI6|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 ISCIDNKD 8
I+CI+N D
Sbjct: 229 IACIENLD 236


>sp|CARB_SACI4|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 ISCIDNKD 8
I+CI+N D
Sbjct: 229 IACIENLD 236


>sp|CARB_SACI3|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 ISCIDNKD 8
I+CI+N D
Sbjct: 229 IACIENLD 236


>sp|CARB_SACI2|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 ISCIDNKD 8
I+CI+N D
Sbjct: 229 IACIENLD 236


>sp|CARB_SACI1|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 ISCIDNKD 8
I+CI+N D
Sbjct: 229 IACIENLD 236


>sp|ARGC_METS3|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 ISCIDN 6
+SCIDN
Sbjct: 302 LSCIDN 307


>sp|HIS6_SULTO|IMIDAZOLE glycerol phosphate synthase subunit|Sulfurisphaera tokodaii

Query: 1 ISCIDNKDG 9
I+C+D K+G
Sbjct: 7 IACLDVKNG 15


>sp|IF1A_METS5|TRANSLATION initiation factor 1A|Metallosphaera sedula (strain ATCC 51363

Query: 1 ISCIDNKDGT 10
I+C+D K+ T
Sbjct: 38 IACLDGKERT 47


>sp|MTRA1_METRM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 1|Methanobrevibacter ruminantium

Query: 1 ISCIDNKDG 9
+ IDN+DG
Sbjct: 133 VDLIDNEDG 141


>sp|GGR_METMA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 SCIDNKDGT 10
SCI + DGT
Sbjct: 72 SCIFSPDGT 80




375|Sequence|1871|1880|NKDGTCTVTY

>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 1 NKDGTC 6
NKDGTC
Sbjct: 705 NKDGTC 710


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 NKDGTC 6
NKDGTC
Sbjct: 700 NKDGTC 705


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 1 NKDGTC 6
NKDGTC
Sbjct: 699 NKDGTC 704


>sp|END3_METJA|ENDONUCLEASE III|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NKDGTCTVTY 10
NKDG C T+
Sbjct: 128 NKDGICVDTH 137


>sp|RRP41_PYRCJ|EXOSOME complex component Rrp41|Pyrobaculum calidifontis (strain DSM

Query: 1 NKDGTCTVTY 10
N DG+ V+Y
Sbjct: 35 NADGSAVVSY 44


>sp|Y182_METKA|PUTATIVE ABC transporter ATP-binding protein|Methanopyrus kandleri (strain

Query: 3 DGTCTV 8
DGTC V
Sbjct: 7 DGTCAV 12


>sp|RPO3_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo3|Thermoplasma volcanium (strain ATCC

Query: 6 CTVTY 10
CTVTY
Sbjct: 101 CTVTY 105


>sp|RPO3_METJA|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanocaldococcus jannaschii (strain

Query: 2 KDGTCTV 8
K+G CTV
Sbjct: 86 KEGPCTV 92


>sp|TOP1_THEAC|DNA topoisomerase 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 6 CTVTY 10
CTVTY
Sbjct: 700 CTVTY 704


>sp|RPO3_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo3|Thermoplasma acidophilum (strain ATCC

Query: 6 CTVTY 10
CTVTY
Sbjct: 101 CTVTY 105




376|Sequence|1876|1885|CTVTYLPTLP

>sp|MTRC_METMP|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus maripaludis (strain DSM

Query: 1 CTVTYLPTLP 10
C V Y+P LP
Sbjct: 250 CEVKYVPELP 259


>sp|TRUA_METPE|TRNA pseudouridine synthase A|Methanosphaerula palustris (strain ATCC

Query: 1 CTVTYLPTLP 10
C VT+ PT P
Sbjct: 225 CGVTFTPTEP 234


>sp|MTRC_METM5|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus maripaludis (strain C5

Query: 1 CTVTYLPTLP 10
C V Y+P LP
Sbjct: 250 CEVKYVPELP 259


>sp|MTRC_METM7|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus maripaludis (strain C7

Query: 1 CTVTYLPTLP 10
C V Y+P LP
Sbjct: 250 CEVKYVPELP 259


>sp|MTRC_METVS|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus vannielii (strain ATCC

Query: 1 CTVTYLPTLP 10
C V Y+P LP
Sbjct: 257 CEVKYVPELP 266


>sp|Y817_ARCFU|UNCHARACTERIZED protein AF_0817|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CTVTYLPTLP 10
C+ Y PT+P
Sbjct: 238 CSRIYHPTIP 247


>sp|Y1005_METKA|PUTATIVE HTH-type transcriptional regulatory protein|Methanopyrus kandleri

Query: 1 CTVTYLPTL 9
C TY+PT+
Sbjct: 249 CKDTYVPTI 257


>sp|CSA2A_SACS2|CRISPR-ASSOCIATED protein Cas7/Csa2 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 TVTYLPTL 9
TVTY+P +
Sbjct: 49 TVTYVPAV 56


>sp|Y1180_METJA|UNCHARACTERIZED protein MJ1180|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TVTYLPT 8
TV YLPT
Sbjct: 33 TVAYLPT 39


>sp|MOAA_METM5|PROBABLE GTP 3',8-cyclase|Methanococcus maripaludis (strain C5 /

Query: 1 CTVTYLPTL 9
CTV LP +
Sbjct: 160 CTVNQLPAI 168


>sp|RECJ2_METJA|EXONUCLEASE RecJ2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CTVTYLPTL 9
CT Y+P L
Sbjct: 210 CTKPYIPDL 218


>sp|MOAA_METMP|PROBABLE GTP 3',8-cyclase|Methanococcus maripaludis (strain DSM 14266

Query: 1 CTVTYLPTL 9
CTV LP +
Sbjct: 160 CTVNQLPAI 168




377|Sequence|1881|1890|LPTLPGDYSI

>sp|FAU1_PYRFU|PROBABLE ribonuclease FAU-1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LPTLPGDYSI 10
L T+PGDY++
Sbjct: 148 LITIPGDYAV 157


>sp|FAU1_PYRHO|PROBABLE ribonuclease FAU-1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LPTLPGDYSI 10
L T+PGDY++
Sbjct: 148 LITIPGDYAV 157


Query: 1 LPTLPGDYSI 10
+P PGDY+I
Sbjct: 368 VPIEPGDYAI 377


>sp|SLAA_METS5|S-LAYER protein A|Metallosphaera sedula (strain ATCC 51363

Query: 2 PTLPGDYSI 10
PT+PG Y+I
Sbjct: 1327 PTMPGSYTI 1335


>sp|FAU1_THEGJ|PROBABLE ribonuclease FAU-1|Thermococcus gammatolerans (strain DSM 15229

Query: 3 TLPGDYSI 10
T+PGDY++
Sbjct: 152 TIPGDYAV 159


>sp|FAU1_PYRAB|PROBABLE ribonuclease FAU-1|Pyrococcus abyssi (strain GE5 /

Query: 3 TLPGDYSI 10
T+PGDY++
Sbjct: 150 TIPGDYAV 157


Query: 1 LPTLPGDYSI 10
+P PGDY+I
Sbjct: 368 VPIEPGDYAI 377


>sp|FAU1_THEKO|PROBABLE ribonuclease FAU-1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 TLPGDYSI 10
T+PGDY++
Sbjct: 152 TIPGDYAV 159


>sp|HDG_METBF|HYPOXANTHINE DNA glycosylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LPTLPGDYSI 10
L +LPGD SI
Sbjct: 19 LGSLPGDVSI 28


>sp|TRUD_NANEQ|PROBABLE tRNA pseudouridine synthase D|Nanoarchaeum equitans (strain

Query: 4 LPGDYSI 10
+PGDY+I
Sbjct: 40 IPGDYTI 46


>sp|TF2B_ARCFU|TRANSCRIPTION initiation factor IIB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LPTLPGDY 8
+PT P DY
Sbjct: 231 MPTSPADY 238


>sp|SODM2_HALSA|SUPEROXIDE dismutase [Mn] 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 LPTLPGDY 8
LP+LP DY
Sbjct: 6 LPSLPYDY 13


>sp|AROA_CALMQ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 1 LPTLPGDYSI 10
L +PGDY++
Sbjct: 219 LSNVPGDYAL 228


>sp|GFPS_NATPD|GERANYLFARNESYL diphosphate synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LPTLPGD 7
P+LPGD
Sbjct: 74 FPSLPGD 80


>sp|RPO1C_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermoplasma acidophilum (strain

Query: 1 LPTLPGDYSI 10
L LP DY++
Sbjct: 17 LEKLPADYAV 26


>sp|AROA_SULTO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LPTLPGDYSI 10
LP GD+SI
Sbjct: 246 LPNFDGDHSI 255


>sp|TF2B_METPE|TRANSCRIPTION initiation factor IIB|Methanosphaerula palustris (strain ATCC

Query: 1 LPTLPGDY 8
LPT P DY
Sbjct: 239 LPTSPIDY 246


>sp|TF2B_METMJ|TRANSCRIPTION initiation factor IIB|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 LPTLPGDY 8
LPT P DY
Sbjct: 242 LPTSPIDY 249


>sp|TF2B_METB6|TRANSCRIPTION initiation factor IIB|Methanoregula boonei (strain DSM 21154

Query: 1 LPTLPGDY 8
LPT P DY
Sbjct: 239 LPTSPIDY 246


>sp|IDH_ARCFU|ISOCITRATE dehydrogenase [NADP]|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LPTLPGDY 8
LP L GDY
Sbjct: 295 LPNLNGDY 302


>sp|AROA_PYRFU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 LPGDYS 9
+PGDYS
Sbjct: 222 VPGDYS 227


>sp|PRIS_HYPBU|DNA primase small subunit PriS|Hyperthermus butylicus (strain DSM

Query: 4 LPGDYSI 10
LPGD+S+
Sbjct: 30 LPGDFSL 36


>sp|CAH_METJA|PROBABLE carbonic anhydrase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PTLPGDY 8
PT+ GDY
Sbjct: 60 PTIIGDY 66


>sp|AROA_THEKO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 4 LPGDYS 9
+PGDYS
Sbjct: 215 VPGDYS 220


>sp|GUAAA_METHJ|GMP synthase [glutamine-hydrolyzing] subunit A|Methanospirillum

Query: 3 TLPGDY 8
TLPGD+
Sbjct: 130 TLPGDF 135


>sp|AROA_AERPE|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 4 LPGDYS 9
+PGDYS
Sbjct: 231 VPGDYS 236


>sp|UBIX_METTH|FLAVIN prenyltransferase UbiX|Methanothermobacter thermautotrophicus

Query: 1 LPTLPGDY 8
LP +PG Y
Sbjct: 148 LPAMPGFY 155


>sp|RL30_PYRCJ|LARGE ribosomal subunit protein uL30|Pyrobaculum calidifontis (strain

Query: 1 LPTLPGD 7
+PT PGD
Sbjct: 22 IPTTPGD 28


>sp|TRUB_AERPE|PROBABLE tRNA pseudouridine synthase B|Aeropyrum pernix (strain ATCC 700893

Query: 4 LPGDYSI 10
+PG+YS+
Sbjct: 252 IPGEYSV 258


>sp|AROA_PYRAB|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 4 LPGDYS 9
+PGDYS
Sbjct: 224 VPGDYS 229


>sp|CBID_PYRAE|COBALT-PRECORRIN-5B C(1)-methyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LPTLPGDYSI 10
LP PG+++I
Sbjct: 105 LPVPPGEHAI 114


>sp|AROA_HALLT|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Halorubrum lacusprofundi (strain ATCC

Query: 3 TLPGDYS 9
T+PGD+S
Sbjct: 251 TVPGDFS 257




378|Sequence|1886|1895|GDYSILVKYN

>sp|HOSA_SULAC|HOMOCITRATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GDYSILVK 8
GDY ILVK
Sbjct: 427 GDYDILVK 434


>sp|HOSA_SULTO|HOMOCITRATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GDYSILVK 8
GDY ILVK
Sbjct: 419 GDYDILVK 426


>sp|HOSA_SACI7|HOMOCITRATE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 GDYSILVK 8
GDY ILVK
Sbjct: 420 GDYDILVK 427


>sp|HOSA_SACI6|HOMOCITRATE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 GDYSILVK 8
GDY ILVK
Sbjct: 420 GDYDILVK 427


>sp|HOSA_SACI4|HOMOCITRATE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GDYSILVK 8
GDY ILVK
Sbjct: 420 GDYDILVK 427


>sp|HOSA_SACI3|HOMOCITRATE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 GDYSILVK 8
GDY ILVK
Sbjct: 420 GDYDILVK 427


>sp|HOSA_SACI2|HOMOCITRATE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 GDYSILVK 8
GDY ILVK
Sbjct: 420 GDYDILVK 427


>sp|HOSA_SACI1|HOMOCITRATE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 GDYSILVK 8
GDY ILVK
Sbjct: 420 GDYDILVK 427


>sp|HOSA_SACS2|HOMOCITRATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GDYSILVK 8
GDY ILVK
Sbjct: 420 GDYDILVK 427


>sp|HELS_METAR|ATP-DEPENDENT DNA helicase Hel308|Methanocella arvoryzae (strain DSM 22066

Query: 1 GDYSILVKY 9
GDYS +++Y
Sbjct: 548 GDYSWIIRY 556


>sp|RNJL_METJA|RNASE J-like protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GDYSILVKY 9
GDY+ LV+Y
Sbjct: 367 GDYNSLVRY 375


>sp|FAU1_HYPBU|PROBABLE ribonuclease FAU-1|Hyperthermus butylicus (strain DSM 5456

Query: 1 GDYSILVK 8
GDY+IL++
Sbjct: 163 GDYAILIE 170


>sp|LYSM_SACS2|HTH-TYPE transcriptional regulator LysM|Saccharolobus solfataricus (strain

Query: 1 GDYSILV 7
GDY ILV
Sbjct: 100 GDYDILV 106


>sp|PYRI_THEKO|ASPARTATE carbamoyltransferase regulatory chain|Thermococcus kodakarensis

Query: 2 DYSILVKYN 10
DY I+ K+N
Sbjct: 87 DYKIIEKFN 95


>sp|RSMA_THEKO|PROBABLE ribosomal RNA small subunit|Thermococcus kodakarensis (strain

Query: 3 YSILVKYN 10
+SI+ KYN
Sbjct: 6 FSIIYKYN 13


>sp|RSMA_THEGJ|PROBABLE ribosomal RNA small subunit|Thermococcus gammatolerans (strain

Query: 3 YSILVKYN 10
+SI+ KYN
Sbjct: 6 FSIIYKYN 13


>sp|SYA_METM6|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 GDYSILVK 8
GDY +LV+
Sbjct: 803 GDYEVLVE 810


>sp|PSB_ACIB4|PROTEASOME subunit beta|Aciduliprofundum boonei (strain DSM 19572

Query: 1 GDYSILVKY 9
GD +LV+Y
Sbjct: 57 GDLQVLVRY 65


>sp|SYA_METM5|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 GDYSILVK 8
GDY +LV+
Sbjct: 803 GDYEVLVE 810


>sp|PURA_THEAC|ADENYLOSUCCINATE synthetase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GDYSILVKYN 10
G Y ++V++N
Sbjct: 33 GSYDVVVRFN 42




379|Sequence|1891|1900|LVKYNDKHIP

>sp|PUR5_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LVKYNDKHI 9
+VKYNDKHI
Sbjct: 339 VVKYNDKHI 347


>sp|DHE_HALSI|GLUTAMATE dehydrogenase A2|Halobacterium salinarum (Halobacterium halobium)

Query: 1 LVKYNDKHIP 10
LV Y D++IP
Sbjct: 382 LVAYEDRNIP 391


>sp|DHE_HALSA|GLUTAMATE dehydrogenase A2|Halobacterium salinarum (strain ATCC 700922

Query: 1 LVKYNDKHIP 10
LV Y D++IP
Sbjct: 382 LVAYEDRNIP 391


>sp|UVRB_METS3|UVRABC system protein B|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 VKYNDKH 8
+KYN+KH
Sbjct: 573 IKYNEKH 579


>sp|RPO1C_PYRAB|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrococcus abyssi (strain GE5 /

Query: 1 LVKYNDKH 8
L+KYN+K+
Sbjct: 30 LIKYNEKY 37


>sp|FER2_HALMA|FERREDOXIN-2 marismortui (strain ATCC 43049

Query: 2 VKYNDKHIP 10
+ YN KH+P
Sbjct: 111 IVYNLKHLP 119


>sp|RPO1C_PYRHO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrococcus horikoshii (strain ATCC

Query: 1 LVKYNDKH 8
L+KYN+K+
Sbjct: 30 LIKYNEKY 37


>sp|MRE11_THEVO|DNA double-strand break repair protein|Thermoplasma volcanium (strain

Query: 1 LVKYNDKHIP 10
++K ND+ IP
Sbjct: 69 MMKLNDRQIP 78


>sp|PGMI_THEVO|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Thermoplasma volcanium

Query: 4 YNDKHIP 10
YN +HIP
Sbjct: 169 YNGEHIP 175


>sp|Y1610_METJA|UNCHARACTERIZED glycosyl hydrolase MJ1610|Methanocaldococcus jannaschii (strain

Query: 1 LVKYNDKHI 9
+VKYN K+I
Sbjct: 137 IVKYNGKYI 145


>sp|HELS_METBU|ATP-DEPENDENT DNA helicase Hel308|Methanococcoides burtonii (strain DSM 6242

Query: 2 VKYNDKH 8
V+ NDKH
Sbjct: 728 VRVNDKH 734


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 1 LVKYNDKHIP 10
+VK N+K IP
Sbjct: 1132 IVKNNEKRIP 1141


>sp|RL15_METTH|LARGE ribosomal subunit protein uL15|Methanothermobacter

Query: 1 LVKYNDKH 8
+VKY+ KH
Sbjct: 47 IVKYDPKH 54


>sp|BARAC_PYRHO|BROAD substrate specificity amino-acid racemase|Pyrococcus horikoshii

Query: 1 LVKYNDKHIP 10
+VK ++K+IP
Sbjct: 24 IVKLDEKYIP 33


>sp|ASST_METJA|L-ASPARTATE semialdehyde sulfurtransferase|Methanocaldococcus jannaschii

Query: 1 LVKYNDKHIP 10
L+K+N H+P
Sbjct: 414 LIKHNINHLP 423


>sp|Y883_PYRHO|IRON-SULFUR cluster assembly SufBD family|Pyrococcus horikoshii (strain ATCC

Query: 2 VKYNDKHI 9
V Y D+HI
Sbjct: 144 VSYEDEHI 151




380|Sequence|1896|1905|DKHIPGSPFT

>sp|Y1289_ARCFU|PUTATIVE GTPase AF_1289|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 PGSPFT 10
PGSPFT
Sbjct: 84 PGSPFT 89


>sp|HTR9_HALSA|HALOBACTERIAL transducer protein 9|Halobacterium salinarum (strain ATCC 700922

Query: 1 DKHIPGSPFT 10
+KH GSPFT
Sbjct: 4 NKHELGSPFT 13


>sp|NTPTH_THEKO|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 HIPGSPF 9
H+PG PF
Sbjct: 71 HLPGVPF 77


>sp|GLGE_PICTO|ALPHA-1,4-GLUCAN:MALTOSE-1-PHOSPHATE maltosyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 DKHIPGSPF 9
DK+ PGSP+
Sbjct: 243 DKNDPGSPW 251


>sp|PRIS_METBU|DNA primase small subunit PriS|Methanococcoides burtonii (strain DSM

Query: 3 HIPGSP 8
HIPG+P
Sbjct: 103 HIPGAP 108


>sp|RS4_AERPE|SMALL ribosomal subunit protein uS4|Aeropyrum pernix (strain ATCC 700893

Query: 3 HIPGSPF 9
+ PGSPF
Sbjct: 155 YAPGSPF 161


>sp|MTMB_METMA|MONOMETHYLAMINE methyltransferase MtmB|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 IPGSPF 9
IPGSP+
Sbjct: 170 IPGSPY 175


>sp|Y811_METTH|UPF0305 protein MTH_811|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 HIPGSPF 9
H PG+PF
Sbjct: 109 HPPGTPF 115


>sp|GLMS_METMA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanosarcina mazei (strain ATCC

Query: 2 KHIPGSP 8
KHI GSP
Sbjct: 135 KHIYGSP 141


>sp|RS13_HALWD|SMALL ribosomal subunit protein uS13|Haloquadratum walsbyi (strain DSM

Query: 1 DKHIPG 6
D HIPG
Sbjct: 84 DDHIPG 89


>sp|MTRA_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanosarcina acetivorans (strain

Query: 3 HIPGSP 8
H+PG P
Sbjct: 35 HLPGKP 40


>sp|NADM1_SULAC|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase 1|Sulfolobus acidocaldarius (strain ATCC

Query: 1 DKHIPGSPFT 10
+ H P +PFT
Sbjct: 39 ESHSPYNPFT 48


>sp|MTRA_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanosarcina mazei (strain ATCC

Query: 3 HIPGSP 8
H+PG P
Sbjct: 35 HLPGKP 40


>sp|MTRA_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanosarcina barkeri (strain

Query: 3 HIPGSP 8
H+PG P
Sbjct: 35 HLPGQP 40


>sp|DTDA_METKA|D-AMINOACYL-TRNA deacylase|Methanopyrus kandleri (strain AV19 /

Query: 3 HIPGSP 8
H+PG+P
Sbjct: 92 HVPGNP 97


>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KHIPG 6
KHIPG
Sbjct: 524 KHIPG 528


>sp|BIOD_NITMS|ATP-DEPENDENT dethiobiotin synthetase BioD|Nitrosopumilus maritimus (strain

Query: 4 IPGSPFT 10
IP SP+T
Sbjct: 77 IPASPYT 83




381|Sequence|1901|1910|GSPFTAKITD

>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 3 PFTAKIT 9
PFT+K+T
Sbjct: 852 PFTSKVT 858


>sp|Y626_PYRAB|UNCHARACTERIZED ATP-binding protein PYRAB06260|Pyrococcus abyssi (strain GE5 /

Query: 3 PFTAKIT 9
PFT K+T
Sbjct: 289 PFTGKVT 295


>sp|Y1593_METB6|UPF0200 protein Mboo_1593|Methanoregula boonei (strain DSM 21154

Query: 4 FTAKITD 10
FTA++TD
Sbjct: 167 FTARVTD 173


>sp|DNAG_META3|DNA primase DnaG|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 PFTAKITD 10
P T KITD
Sbjct: 420 PITQKITD 427


>sp|PCNA_PYRAB|DNA polymerase sliding clamp|Pyrococcus abyssi (strain GE5 /

Query: 3 PFTAKI 8
PFTAK+
Sbjct: 129 PFTAKV 134


>sp|GATD_METMP|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcus maripaludis (strain DSM

Query: 2 SPFTAKIT 9
+PFT K+T
Sbjct: 258 NPFTKKVT 265


>sp|TFE_METST|TRANSCRIPTION factor E|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 FTAKITD 10
FTA++TD
Sbjct: 44 FTAEVTD 50


>sp|PCNA_PYRFU|DNA polymerase sliding clamp|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PFTAKI 8
PFTAK+
Sbjct: 129 PFTAKV 134


>sp|CSG1_HALHT|CELL surface glycoprotein 1|Haloarcula hispanica (strain ATCC 33960

Query: 2 SPFTAKITD 10
SP+ K+TD
Sbjct: 297 SPYYVKVTD 305


>sp|CSG2_HALHT|CELL surface glycoprotein 2|Haloarcula hispanica (strain ATCC 33960

Query: 2 SPFTAKITD 10
SP+ K+TD
Sbjct: 298 SPYYVKVTD 306




382|Sequence|1906|1915|AKITDDSRRC

>sp|IF2A_SACI7|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 2 KITDDSRR 9
K+TDD RR
Sbjct: 84 KVTDDERR 91


>sp|IF2A_SACI1|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 2 KITDDSRR 9
K+TDD RR
Sbjct: 84 KVTDDERR 91


>sp|IF2A_SACI6|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 2 KITDDSRR 9
K+TDD RR
Sbjct: 84 KVTDDERR 91


>sp|IF2A_SACI4|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 2 KITDDSRR 9
K+TDD RR
Sbjct: 84 KVTDDERR 91


>sp|IF2A_SACI3|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 2 KITDDSRR 9
K+TDD RR
Sbjct: 84 KVTDDERR 91


>sp|IF2A_SACI2|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 2 KITDDSRR 9
K+TDD RR
Sbjct: 84 KVTDDERR 91


>sp|DADD_METTP|5'-DEOXYADENOSINE deaminase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 AKITDDSRRC 10
AKI D+++RC
Sbjct: 396 AKILDEAQRC 405


>sp|IF2A_SACS2|TRANSLATION initiation factor 2 subunit|Saccharolobus solfataricus (strain

Query: 2 KITDDSRR 9
K+TDD RR
Sbjct: 84 KVTDDERR 91


>sp|Y355_PYRFU|VAPC ribonuclease PF0355|Pyrococcus furiosus (strain ATCC 43587

Query: 3 ITDDSRR 9
ITDDS+R
Sbjct: 113 ITDDSKR 119


>sp|GSA_METS5|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Metallosphaera sedula (strain ATCC 51363

Query: 3 ITDDSRR 9
+T+DSRR
Sbjct: 41 VTEDSRR 47


>sp|ILVD_METM6|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C6 /

Query: 1 AKITDDSRRC 10
KIT++ RC
Sbjct: 170 GKITEEELRC 179


>sp|PUR7_NITMS|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 AKITDD 6
AKITDD
Sbjct: 165 AKITDD 170


>sp|KAE1B_HALSA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 AKITDDSRR 9
A++T D+RR
Sbjct: 380 ARLTSDARR 388


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 2 KITDDSRRC 10
KI+D+ R C
Sbjct: 21 KISDEVREC 29


>sp|Y179_THEAC|UPF0200 protein Ta0179|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 KITDDSR 8
KITDD R
Sbjct: 72 KITDDGR 78




383|Sequence|1911|1920|DSRRCSQVKL

>sp|TSR3_METST|16S rRNA aminocarboxypropyltransferase|Methanosphaera stadtmanae

Query: 1 DSRRCSQVKL 10
D +RC+ +KL
Sbjct: 13 DPKRCTSIKL 22


>sp|RPO1N_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus solfataricus (strain

Query: 3 RRCSQVKL 10
RRC +VK+
Sbjct: 99 RRCGRVKI 106


>sp|RPO1N_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus shibatae (strain ATCC

Query: 3 RRCSQVKL 10
RRC +VK+
Sbjct: 99 RRCGRVKI 106




384|Sequence|1916|1925|SQVKLGSAAD

>sp|Y1096_ARCFU|UNCHARACTERIZED protein AF_1096|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 QVKLGSAAD 10
QV+ GS+AD
Sbjct: 52 QVRTGSSAD 60




385|Sequence|1921|1930|GSAADFLLDI

>sp|ARLY_METAR|ARGININOSUCCINATE lyase|Methanocella arvoryzae (strain DSM 22066

Query: 2 SAADFLLDI 10
SA DF+LD+
Sbjct: 233 SARDFILDL 241


>sp|IORA_METTM|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter marburgensis

Query: 2 SAADFLLDI 10
SAAD+LL +
Sbjct: 416 SAADYLLSM 424


>sp|Y307_ARCFU|UNCHARACTERIZED protein AF_0307|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GSAADFLLD 9
GSA D++L+
Sbjct: 16 GSAVDYILE 24


>sp|IORA_METTH|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter thermautotrophicus

Query: 2 SAADFLLDI 10
SAAD+LL +
Sbjct: 416 SAADYLLSM 424


>sp|FLAB1_HALSA|FLAGELLIN B1|Halobacterium salinarum (strain ATCC 700922

Query: 1 GSAADFLLD 9
GS+AD L+D
Sbjct: 131 GSSADVLVD 139


>sp|HACB1_METAC|METHANOGEN homoaconitase small subunit 1|Methanosarcina acetivorans (strain

Query: 5 DFLLDI 10
DFLLDI
Sbjct: 142 DFLLDI 147


>sp|HACB2_METAC|METHANOGEN homoaconitase small subunit 2|Methanosarcina acetivorans (strain

Query: 5 DFLLDI 10
DFLLDI
Sbjct: 141 DFLLDI 146




386|Sequence|1926|1935|FLLDISETDL

>sp|RS2_METHJ|SMALL ribosomal subunit protein uS2|Methanospirillum hungatei JF-1

Query: 1 FLLDISETD 9
++LDI ETD
Sbjct: 49 YILDIRETD 57


>sp|RS2_METB6|SMALL ribosomal subunit protein uS2|Methanoregula boonei (strain DSM

Query: 1 FLLDISETD 9
++LDI ETD
Sbjct: 50 YILDIRETD 58


>sp|RS2_NATPD|SMALL ribosomal subunit protein uS2|Natronomonas pharaonis (strain ATCC

Query: 1 FLLDISETD 9
++LD+S+TD
Sbjct: 124 YVLDVSQTD 132


>sp|MFNA_METMJ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanoculleus marisnigri

Query: 1 FLLDISETD 9
FL+D+ +TD
Sbjct: 356 FLVDMGDTD 364


>sp|SYFB_THEAC|PHENYLALANINE--TRNA ligase beta subunit|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FLLDISETDL 10
F +DI+ TDL
Sbjct: 220 FFVDITGTDL 229


>sp|RS2_HYPBU|SMALL ribosomal subunit protein uS2|Hyperthermus butylicus (strain DSM

Query: 1 FLLDISETD 9
++LDI +TD
Sbjct: 55 YILDIRKTD 63


>sp|RS2_THEPD|SMALL ribosomal subunit protein uS2|Thermofilum pendens (strain DSM

Query: 1 FLLDISETD 9
+LLD+ +TD
Sbjct: 49 YLLDVKKTD 57


>sp|RS2_HALWD|SMALL ribosomal subunit protein uS2|Haloquadratum walsbyi (strain DSM

Query: 1 FLLDISETD 9
++LD+S+TD
Sbjct: 126 YVLDVSQTD 134


>sp|AATI_HALSA|A-TYPE ATP synthase subunit I|Halobacterium salinarum (strain ATCC

Query: 2 LLDISETD 9
LLD+SE D
Sbjct: 69 LLDVSEGD 76


>sp|LRS14_SACS2|HTH-TYPE transcriptional regulator lrs14|Saccharolobus solfataricus

Query: 1 FLLDISETDL 10
F DIS+TD
Sbjct: 24 FCYDISDTDF 33




387|Sequence|1931|1940|SETDLSSLTA

>sp|SYL_THEAC|LEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SETDLSSLT 9
+ETDL+S+T
Sbjct: 651 NETDLASIT 659


>sp|HELS_METMA|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SETDLSSLTA 10
SETD+SS+ A
Sbjct: 290 SETDVSSVLA 299


>sp|DMSR_HALVD|DIMETHYL sulfoxide reductase transcriptional activator|Haloferax volcanii

Query: 4 DLSSLTA 10
DLSSLTA
Sbjct: 151 DLSSLTA 157




388|Sequence|1936|1945|SSLTASIKAP

***** No hits found ******


389|Sequence|1941|1950|SIKAPSGRDE

>sp|SYFA_METAC|PHENYLALANINE--TRNA ligase alpha subunit|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 APSGRDE 10
AP+GRDE
Sbjct: 130 APAGRDE 136


>sp|GLCD2_SACS2|GLUCOSE 1-dehydrogenase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SIKAPSGRDE 10
S+K P G+DE
Sbjct: 54 SVKPPIGKDE 63


>sp|PSB1_IGNH4|PROTEASOME subunit beta 1|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 SIKAPSGRD 9
S+K SGRD
Sbjct: 163 SVKVASGRD 171


>sp|SYA_AERPE|ALANINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 SIKAPSGRDE 10
++KAP G++E
Sbjct: 745 AVKAPRGQEE 754


>sp|AATB_METPE|A-TYPE ATP synthase subunit B|Methanosphaerula palustris (strain ATCC

Query: 1 SIKAPSGRD 9
+IK P GRD
Sbjct: 74 TIKMPVGRD 82


>sp|DPOL_PYRSD|DNA polymerase|Pyrococcus sp. (strain GB-D)

Query: 2 IKAPSGRD 9
IK P GRD
Sbjct: 228 IKLPLGRD 235


>sp|DPOL_PYRAB|DNA polymerase 1|Pyrococcus abyssi (strain GE5 /

Query: 2 IKAPSGRD 9
IK P GRD
Sbjct: 228 IKLPLGRD 235


>sp|DPOL_PYRGL|DNA polymerase|Pyrococcus glycovorans

Query: 2 IKAPSGRD 9
IK P GRD
Sbjct: 228 IKLPLGRD 235


>sp|DPOL_PYRAY|DNA polymerase 1|Pyrococcus abyssi

Query: 2 IKAPSGRD 9
IK P GRD
Sbjct: 228 IKLPLGRD 235




390|Sequence|1946|1955|SGRDEPCLLK

>sp|UVRC_NATPD|UVRABC system protein C|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GRDEPCL 8
GRD PCL
Sbjct: 156 GRDRPCL 162


>sp|IF5A_METBU|TRANSLATION initiation factor 5A|Methanococcoides burtonii (strain DSM 6242

Query: 4 DEPCLLK 10
DEPC++K
Sbjct: 20 DEPCVIK 26


>sp|IF5A_METTP|TRANSLATION initiation factor 5A|Methanothrix thermoacetophila (strain DSM

Query: 4 DEPCLLK 10
DEPC++K
Sbjct: 20 DEPCIIK 26


>sp|NADK_THEAC|NAD kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SGRDEPCLL 9
+GRD+ C+L
Sbjct: 216 AGRDQECIL 224


>sp|UVRC_HALMA|UVRABC system protein C|Haloarcula marismortui (strain ATCC 43049

Query: 1 SGRDEPCL 8
S RD PCL
Sbjct: 159 SNRDRPCL 166


>sp|KADA_THEGJ|ADENYLATE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 GRDEPCLL 9
RDEP LL
Sbjct: 78 ARDEPVLL 85


>sp|RL2_IGNH4|LARGE ribosomal subunit protein uL2|Ignicoccus hospitalis (strain KIN4/I

Query: 1 SGRDEPCLLK 10
+GRDE LLK
Sbjct: 166 AGRDEKPLLK 175


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GRDEPCLLK 10
GRDE LLK
Sbjct: 1065 GRDEYTLLK 1073


>sp|AROC_METST|CHORISMATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 GRDEPCL 8
GR +PC+
Sbjct: 327 GRHDPCI 333


>sp|AROC_METS3|CHORISMATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 GRDEPCL 8
GR +PC+
Sbjct: 325 GRHDPCI 331


>sp|Y249_METTH|UNCHARACTERIZED protein MTH_249|Methanothermobacter thermautotrophicus (strain

Query: 3 RDEPCLL 9
RDE CL+
Sbjct: 81 RDEDCLI 87


>sp|UVRC_HALLT|UVRABC system protein C|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 SGRDEPCL 8
+ RD PCL
Sbjct: 155 ANRDRPCL 162


>sp|RL2_STAMF|LARGE ribosomal subunit protein uL2|Staphylothermus marinus (strain ATCC

Query: 2 GRDEPCLLK 10
GRDE LLK
Sbjct: 164 GRDEKPLLK 172


>sp|AROC_ARCFU|CHORISMATE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GRDEPCLL 9
GR +PC++
Sbjct: 323 GRHDPCIV 330


>sp|QUEC_ARCFU|7-CYANO-7-DEAZAGUANINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GRDEPCL 8
G D PCL
Sbjct: 187 GGDRPCL 193


>sp|FTTA_METJA|TRANSCRIPTION termination factor FttA|Methanocaldococcus jannaschii (strain ATCC

Query: 4 DEPCLL 9
DEPC++
Sbjct: 496 DEPCVI 501


>sp|CCA_SULTO|CCA-ADDING enzyme|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GRDEPCLLK 10
GRDE LLK
Sbjct: 142 GRDEVRLLK 150


>sp|TRUB_METBF|PROBABLE tRNA pseudouridine synthase B|Methanosarcina barkeri (strain Fusaro

Query: 1 SGRDEPCLLK 10
SG++ CLLK
Sbjct: 102 SGKEYVCLLK 111


>sp|CCA_THEAC|CCA-ADDING enzyme|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GRDEPCLLK 10
GRDE LLK
Sbjct: 147 GRDEVRLLK 155


>sp|CCA_THEAI|CCA-ADDING enzyme|Thermoplasma acidophilum

Query: 2 GRDEPCLLK 10
GRDE LLK
Sbjct: 147 GRDEVRLLK 155




391|Sequence|1951|1960|PCLLKRLPNN

>sp|CPS_METS3|CARBAMOYL-PHOSPHATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 PCLLKRLPNN 10
PCL++ L NN
Sbjct: 222 PCLVEGLDNN 231


>sp|ISCS2_ARCFU|CYSTEINE desulfurase IscS 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 KRLPNN 10
KRLPNN
Sbjct: 286 KRLPNN 291


>sp|ISCS1_ARCFU|CYSTEINE desulfurase IscS 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 KRLPNN 10
KRLPNN
Sbjct: 286 KRLPNN 291


>sp|RL15_METVS|LARGE ribosomal subunit protein uL15|Methanococcus vannielii (strain

Query: 1 PCLLKRL 7
PCL+K+L
Sbjct: 64 PCLIKKL 70


>sp|RL15_METVA|LARGE ribosomal subunit protein uL15|Methanococcus vannielii

Query: 1 PCLLKRL 7
PCL+K+L
Sbjct: 64 PCLIKKL 70


>sp|Y1416_METJA|UNCHARACTERIZED protein MJ1416|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CLLKRLPNN 10
CL K++P N
Sbjct: 11 CLRKKIPEN 19


>sp|DPHB_AERPE|DIPHTHINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PCLLKRLPN 9
P LL RLP+
Sbjct: 205 PALLARLPS 213


>sp|Y363_METJA|MCM-LIKE protein MJ0363|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LLKRLPN 9
+LKR+PN
Sbjct: 13 MLKRMPN 19


>sp|METE_AERPE|METHIONINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 CLLKRLPNN 10
C LKRLP +
Sbjct: 304 CGLKRLPRD 312


>sp|3MGH_METAR|PUTATIVE 3-methyladenine DNA glycosylase|Methanocella arvoryzae (strain DSM

Query: 1 PCLLKRLPNN 10
PC+ KR P +
Sbjct: 190 PCVSKRAPGD 199




392|Sequence|1956|1965|RLPNNHIGIS

>sp|ARLY_PYRFU|ARGININOSUCCINATE lyase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RLPNNHIGIS 10
+LPN H+ S
Sbjct: 261 KLPNEHLSTS 270


>sp|EF2_IGNH4|ELONGATION factor 2|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 RLPNNHIG 8
R+PN +IG
Sbjct: 641 RVPNEYIG 648


>sp|DUT_HALSA|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Halobacterium

Query: 2 LPNNHIG 8
+P NH+G
Sbjct: 84 IPENHVG 90


>sp|DUT_HALS3|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Halobacterium

Query: 2 LPNNHIG 8
+P NH+G
Sbjct: 84 IPENHVG 90


>sp|BIOB_CENSY|BIOTIN synthase|Cenarchaeum symbiosum (strain A)

Query: 4 NNHIGIS 10
N H+GIS
Sbjct: 129 NTHVGIS 135


>sp|EF2_NATPD|ELONGATION factor 2|Natronomonas pharaonis (strain ATCC 35678

Query: 1 RLPNNH 6
R PNNH
Sbjct: 481 RSPNNH 486


>sp|EF2_HALMA|ELONGATION factor 2|Haloarcula marismortui (strain ATCC 43049

Query: 2 LPNNHIG 8
+PN+H+G
Sbjct: 632 VPNDHMG 638


Query: 1 RLPNNH 6
R PNNH
Sbjct: 480 RSPNNH 485


>sp|SYS_METS5|SERINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 RLPNNHIGIS 10
RLP ++G+S
Sbjct: 270 RLPLRYVGLS 279




393|Sequence|1961|1970|HIGISFIPRE

>sp|IF2P_PYRIL|PROBABLE translation initiation factor IF-2|Pyrobaculum islandicum (strain

Query: 1 HIGISFIP 8
HIG+SF+P
Sbjct: 41 HIGVSFVP 48


>sp|IF2P_PYRNV|PROBABLE translation initiation factor IF-2|Pyrobaculum neutrophilum

Query: 1 HIGISFIP 8
HIG+SF+P
Sbjct: 41 HIGMSFVP 48


>sp|IF2P_PYRAR|PROBABLE translation initiation factor IF-2|Pyrobaculum arsenaticum

Query: 1 HIGISFIP 8
HIG+SF+P
Sbjct: 42 HIGMSFVP 49


>sp|IF2P_PYRAE|PROBABLE translation initiation factor IF-2|Pyrobaculum aerophilum (strain

Query: 1 HIGISFIP 8
HIG+SF+P
Sbjct: 42 HIGMSFVP 49


>sp|IF2P_CALMQ|PROBABLE translation initiation factor IF-2|Caldivirga maquilingensis

Query: 1 HIGISFIP 8
HIG+S++P
Sbjct: 43 HIGLSYLP 50


>sp|IF2P_THEPD|PROBABLE translation initiation factor IF-2|Thermofilum pendens (strain

Query: 1 HIGISFIP 8
HIG SF+P
Sbjct: 48 HIGASFLP 55


>sp|IF2P_HYPBU|PROBABLE translation initiation factor IF-2|Hyperthermus butylicus (strain

Query: 1 HIGISFIP 8
H+G SF+P
Sbjct: 49 HVGASFVP 56


>sp|ARCS_METJA|ARCHAEOSINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HIGISFIPRE 10
GI+FIP E
Sbjct: 443 QFGINFIPNE 452


>sp|Y863_ARCFU|UNCHARACTERIZED protein AF_0863|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IGISFIP 8
IGI+FIP
Sbjct: 145 IGIAFIP 151


>sp|DNAK_METTH|CHAPERONE protein DnaK|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 IGISFIP 8
IG+S+IP
Sbjct: 577 IGVSYIP 583


>sp|CAS8_THETK|CRISPR system associated protein Cas8|Thermoproteus tenax (strain ATCC

Query: 4 ISFIPRE 10
++FIPRE
Sbjct: 211 LTFIPRE 217


>sp|BRIX_METKA|PROBABLE Brix domain-containing ribosomal biogenesis|Methanopyrus kandleri

Query: 2 IGISFIPR 9
+G+ F+PR
Sbjct: 129 LGVEFVPR 136


>sp|GVPD2_HALSA|PROTEIN GvpD2|Halobacterium salinarum (strain ATCC 700922

Query: 1 HIGISFIPRE 10
H GI+ PRE
Sbjct: 13 HEGIAHFPRE 22


>sp|RL1_HYPBU|LARGE ribosomal subunit protein uL1|Hyperthermus butylicus (strain DSM

Query: 4 ISFIPRE 10
+SF+PRE
Sbjct: 1 MSFVPRE 7


>sp|TSGDD_HALVD|GLUCOSE import ATP-binding protein TsgD13|Haloferax volcanii (strain ATCC

Query: 3 GISFIPRE 10
G+SF+P +
Sbjct: 363 GVSFVPED 370


>sp|GCH1_CALMQ|GTP cyclohydrolase 1|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 IGISFIPR 9
IG+S IPR
Sbjct: 95 IGVSKIPR 102


>sp|SYFB_METHJ|PHENYLALANINE--TRNA ligase beta subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 IGISFIPRE 10
+GIS++P E
Sbjct: 477 LGISYLPAE 485




394|Sequence|1966|1975|FIPREVGEHL

>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 1 FIPREVG 7
FIPREVG
Sbjct: 746 FIPREVG 752


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 1 FIPREVG 7
FIPRE+G
Sbjct: 762 FIPREIG 768


>sp|Y1033_PYRAR|UPF0210 protein Pars_1033|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 FIPREVGEHL 10
F PRE+GE L
Sbjct: 3 FDPREIGEVL 12


>sp|KAE1B_HALWD|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 PREVGEHL 10
PRE EH+
Sbjct: 41 PREAAEHM 48


>sp|KAE1B_HALSA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 PREVGEHL 10
PRE EH+
Sbjct: 43 PREAAEHM 50


>sp|KAE1B_NATPD|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 PREVGEHL 10
PRE EH+
Sbjct: 42 PREAAEHM 49


>sp|COBS_METKA|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanopyrus kandleri (strain AV19 /

Query: 3 PREVGEH 9
PRE+GE
Sbjct: 25 PREIGEQ 31


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 1 FIPREVG 7
F PREVG
Sbjct: 722 FTPREVG 728


>sp|Y3581_PYRAE|UPF0210 protein PAE3581|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 FIPREVGEHL 10
F P+E+GE L
Sbjct: 3 FDPKEIGEIL 12


>sp|KAE1B_HALMA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 PREVGEHL 10
PRE EH+
Sbjct: 48 PREAAEHM 55


>sp|CDC61_HALSA|ORC1-TYPE DNA replication protein 1|Halobacterium salinarum (strain ATCC

Query: 1 FIPREV 6
FIPREV
Sbjct: 12 FIPREV 17


>sp|SERA_METJA|D-3-PHOSPHOGLYCERATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FIPREVGEHL 10
+IP+EV E +
Sbjct: 171 YIPKEVAESM 180


>sp|CDC69_HALSA|ORC1-TYPE DNA replication protein 9|Halobacterium salinarum (strain ATCC

Query: 1 FIPREVGEH 9
F+PREV EH
Sbjct: 24 FVPREV-EH 31


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii

Query: 2 IPREVGE 8
IP+E+GE
Sbjct: 6 IPKEIGE 12


>sp|CBID_METS3|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 1 FIPREVGEHL 10
F+P +GE L
Sbjct: 207 FVPGNIGEKL 216


>sp|GLYA_PYRNV|SERINE hydroxymethyltransferase|Pyrobaculum neutrophilum (strain DSM

Query: 2 IPREVGEHL 10
+PRE+GE L
Sbjct: 2 LPRELGEIL 10


>sp|HDRC1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit C|Methanosarcina acetivorans

Query: 5 EVGEHL 10
E+GEHL
Sbjct: 126 EIGEHL 131


>sp|GCSH3_SULAC|PROBABLE glycine cleavage system H|Sulfolobus acidocaldarius (strain ATCC

Query: 2 IPREVGEHL 10
+PR VGE +
Sbjct: 50 VPRRVGERV 58


>sp|EF2_PICTO|ELONGATION factor 2|Picrophilus torridus (strain ATCC 700027

Query: 2 IPREVGEHL 10
I +E GEHL
Sbjct: 424 INQETGEHL 432


>sp|KAE1_METKA|TRNA N6-adenosine threonylcarbamoyltransferase|Methanopyrus kandleri

Query: 1 FIPREVGEH 9
+PRE EH
Sbjct: 40 ILPREAAEH 48


>sp|KAE1_PYRIL|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrobaculum islandicum

Query: 3 PREVGEH 9
PRE EH
Sbjct: 41 PREAAEH 47


>sp|CPGS_PYRFU|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus furiosus (strain ATCC

Query: 1 FIPREVGE 8
F+PR +GE
Sbjct: 314 FVPRLIGE 321


>sp|ARLY_PYRAE|ARGININOSUCCINATE lyase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 IPREVGEHL 10
IP+E GE +
Sbjct: 49 IPKEAGERI 57


>sp|EF2_THEAC|ELONGATION factor 2|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 IPREVGEHL 10
I +E GEHL
Sbjct: 424 INQETGEHL 432


>sp|GLYA_CALMQ|SERINE hydroxymethyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 2 IPREVGEHL 10
+PR+ G H+
Sbjct: 117 VPRQCGGHI 125


>sp|EF2_THEVO|ELONGATION factor 2|Thermoplasma volcanium (strain ATCC 51530

Query: 2 IPREVGEHL 10
I +E GEHL
Sbjct: 424 INQETGEHL 432


>sp|CCA_SULAC|CCA-ADDING enzyme|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FIPREVGE 8
F P+EVG+
Sbjct: 60 FYPKEVGK 67


>sp|TRM56_HALSA|TRNA (cytidine(56)-2'-O)-methyltransferase|Halobacterium salinarum

Query: 2 IPREVGEHL 10
IP E+G+H+
Sbjct: 166 IPEELGKHV 174


>sp|TRM56_HALS3|TRNA (cytidine(56)-2'-O)-methyltransferase|Halobacterium salinarum

Query: 2 IPREVGEHL 10
IP E+G+H+
Sbjct: 166 IPEELGKHV 174


>sp|EF2_METMJ|ELONGATION factor 2|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 IPREVGEHL 10
I E GEHL
Sbjct: 426 INEETGEHL 434


>sp|EF2_METPE|ELONGATION factor 2|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 IPREVGEHL 10
I E GEHL
Sbjct: 426 INEETGEHL 434


>sp|EF2_METB6|ELONGATION factor 2|Methanoregula boonei (strain DSM 21154

Query: 2 IPREVGEHL 10
I E GEHL
Sbjct: 426 INEETGEHL 434


>sp|EF2_METM7|ELONGATION factor 2|Methanococcus maripaludis (strain C7 /

Query: 2 IPREVGEHL 10
I E GEHL
Sbjct: 427 INEETGEHL 435


>sp|EF2_METM6|ELONGATION factor 2|Methanococcus maripaludis (strain C6 /

Query: 2 IPREVGEHL 10
I E GEHL
Sbjct: 427 INEETGEHL 435


>sp|EF2_METVS|ELONGATION factor 2|Methanococcus vannielii (strain ATCC 35089

Query: 2 IPREVGEHL 10
I E GEHL
Sbjct: 427 INEETGEHL 435


>sp|EF2_METMP|ELONGATION factor 2|Methanococcus maripaludis (strain DSM 14266

Query: 2 IPREVGEHL 10
I E GEHL
Sbjct: 427 INEETGEHL 435


>sp|EF2_METM5|ELONGATION factor 2|Methanococcus maripaludis (strain C5 /

Query: 2 IPREVGEHL 10
I E GEHL
Sbjct: 427 INEETGEHL 435


>sp|EF2_META3|ELONGATION factor 2|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 IPREVGEHL 10
I E GEHL
Sbjct: 427 INEETGEHL 435


>sp|HELS_METB6|ATP-DEPENDENT DNA helicase Hel308|Methanoregula boonei (strain DSM 21154

Query: 5 EVGEHL 10
EVGEH+
Sbjct: 475 EVGEHI 480


>sp|EF2_METST|ELONGATION factor 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 IPREVGEHL 10
I E GEHL
Sbjct: 426 INEETGEHL 434


>sp|KAE1_PYRNV|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrobaculum

Query: 3 PREVGEH 9
PRE EH
Sbjct: 41 PREAAEH 47




395|Sequence|1971|1980|VGEHLVSIKK

>sp|TMG10_METTL|PROBABLE tRNA (guanine(10)-N2)-dimethyltransferase|Methanothermococcus

Query: 3 EHLVSIKK 10
EH++SIKK
Sbjct: 63 EHIISIKK 70


>sp|EF2_THEVO|ELONGATION factor 2|Thermoplasma volcanium (strain ATCC 51530

Query: 1 VGEHLVS 7
GEHL+S
Sbjct: 428 TGEHLIS 434


>sp|EF2_METS3|ELONGATION factor 2|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 GEHLVS 7
GEHLVS
Sbjct: 431 GEHLVS 436


>sp|EF2_ARCFU|ELONGATION factor 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GEHLVS 7
GEHL+S
Sbjct: 428 GEHLIS 433


>sp|EF2_METB6|ELONGATION factor 2|Methanoregula boonei (strain DSM 21154

Query: 1 VGEHLVS 7
GEHL+S
Sbjct: 430 TGEHLIS 436


>sp|EF2_HALMD|ELONGATION factor 2|Halomicrobium mukohataei (strain ATCC 700874

Query: 2 GEHLVS 7
GEHL+S
Sbjct: 431 GEHLIS 436




396|Sequence|1976|1985|VSIKKNGNHV

>sp|SYK_METBA|LYSINE--TRNA ligase|Methanosarcina barkeri

Query: 3 IKKNGNHV 10
+KKNG H+
Sbjct: 16 LKKNGKHL 23


>sp|Y1504_ARCFU|UNCHARACTERIZED protein AF_1504|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VSIKKNG 7
VS+KKNG
Sbjct: 157 VSVKKNG 163


>sp|TREH_THEAC|TREHALASE acidophilum (strain ATCC 25905

Query: 3 IKKNGNHV 10
+KKN +HV
Sbjct: 143 LKKNADHV 150


>sp|YC8A_METJA|UNCHARACTERIZED protein MJ1282.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 KNGNH 9
KNGNH
Sbjct: 156 KNGNH 160


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 5 KNGNHV 10
KNG+HV
Sbjct: 371 KNGDHV 376


>sp|ILVD_METM6|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C6 /

Query: 2 SIKKNGNH 9
SIK GNH
Sbjct: 303 SIKPGGNH 310


>sp|BIOW_METM5|6-CARBOXYHEXANOATE--COA ligase|Methanococcus maripaludis (strain C5 /

Query: 5 KNGNHV 10
+NGNHV
Sbjct: 10 RNGNHV 15


>sp|BIOW_METM6|6-CARBOXYHEXANOATE--COA ligase|Methanococcus maripaludis (strain C6 /

Query: 5 KNGNHV 10
+NGNHV
Sbjct: 10 RNGNHV 15


>sp|Y909_METM5|UPF0305 protein MmarC5_0909|Methanococcus maripaludis (strain C5 /

Query: 3 IKKNGNH 9
I+KNGN+
Sbjct: 130 IEKNGNY 136


>sp|Y665_METMP|UPF0305 protein MMP0665|Methanococcus maripaludis (strain DSM 14266

Query: 3 IKKNGNH 9
I+KNGN+
Sbjct: 130 IEKNGNY 136


>sp|Y221_METM6|UPF0305 protein MmarC6_0221|Methanococcus maripaludis (strain C6 /

Query: 3 IKKNGNH 9
I+KNGN+
Sbjct: 130 IEKNGNY 136


>sp|PANE_THEKO|2-DEHYDROPANTOATE 2-reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 SIKKNGNHV 10
+I KNG HV
Sbjct: 37 AINKNGLHV 45




397|Sequence|1981|1990|NGNHVANSPV

>sp|RL18_METS3|LARGE ribosomal subunit protein uL18|Methanobrevibacter smithii (strain

Query: 1 NGNHVAN 7
NG HVAN
Sbjct: 144 NGEHVAN 150


>sp|TRPE2_HALMA|ANTHRANILATE synthase component 1 2|Haloarcula marismortui (strain ATCC 43049

Query: 2 GNHVANSPV 10
G+HV ++P+
Sbjct: 324 GDHVVSNPI 332


>sp|RSMA_METBU|PROBABLE ribosomal RNA small subunit|Methanococcoides burtonii (strain DSM

Query: 2 GNHVANSP 9
GNH+ N P
Sbjct: 223 GNHLLNVP 230


>sp|BIOW_METM5|6-CARBOXYHEXANOATE--COA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 NGNHVANS 8
NGNHV+ +
Sbjct: 11 NGNHVSGA 18


>sp|CARA_ARCFU|CARBAMOYL phosphate synthase small chain|Archaeoglobus fulgidus (strain ATCC

Query: 2 GNHVANSPV 10
G+H +N PV
Sbjct: 269 GHHGSNQPV 277


>sp|RL18_THEKO|LARGE ribosomal subunit protein uL18|Thermococcus kodakarensis (strain

Query: 1 NGNHVAN 7
NG H+AN
Sbjct: 145 NGEHIAN 151


>sp|BIOW_METMP|6-CARBOXYHEXANOATE--COA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 NGNHVANS 8
NGNHV+ +
Sbjct: 11 NGNHVSGA 18


>sp|BIOW_METM6|6-CARBOXYHEXANOATE--COA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 NGNHVANS 8
NGNHV+ +
Sbjct: 11 NGNHVSGA 18




398|Sequence|1986|1995|ANSPVSIMVV

>sp|Y3581_PYRAE|UPF0210 protein PAE3581|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ANSPVSIMV 9
A SPVSIM+
Sbjct: 78 AVSPVSIML 86




399|Sequence|1991|2000|SIMVVQSEIG

***** No hits found ******


400|Sequence|1996|2005|QSEIGDARRA

>sp|CDC61_SACS2|ORC1-TYPE DNA replication protein 1|Saccharolobus solfataricus (strain ATCC

Query: 3 EIGDARRA 10
E GDARRA
Sbjct: 245 EHGDARRA 252


>sp|CDC6_THEON|ORC1-TYPE DNA replication protein|Thermococcus onnurineus (strain NA1)

Query: 3 EIGDARRA 10
E GDARRA
Sbjct: 254 EHGDARRA 261


>sp|CDC6_THEKO|ORC1-TYPE DNA replication protein|Thermococcus kodakarensis (strain ATCC

Query: 3 EIGDARRA 10
E GDARRA
Sbjct: 254 EHGDARRA 261


>sp|UPPS_HALSA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Halobacterium

Query: 2 SEIGDARR 9
SE+G+ARR
Sbjct: 271 SEVGEARR 278


>sp|CDC6_METLZ|ORC1-TYPE DNA replication protein|Methanocorpusculum labreanum (strain ATCC

Query: 3 EIGDARRA 10
E GDARRA
Sbjct: 262 EHGDARRA 269


>sp|CDC61_METMA|ORC1-TYPE DNA replication protein 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 EIGDARRA 10
E GDARRA
Sbjct: 250 EHGDARRA 257


>sp|CDC61_METAC|ORC1-TYPE DNA replication protein 1|Methanosarcina acetivorans (strain ATCC

Query: 3 EIGDARRA 10
E GDARRA
Sbjct: 250 EHGDARRA 257


>sp|CDC6_METB6|ORC1-TYPE DNA replication protein|Methanoregula boonei (strain DSM 21154

Query: 3 EIGDARRA 10
E GDARRA
Sbjct: 263 EHGDARRA 270


>sp|CDC6D_HALMA|ORC1-TYPE DNA replication protein 4|Haloarcula marismortui (strain ATCC 43049

Query: 3 EIGDARRA 10
E GDARRA
Sbjct: 362 EHGDARRA 369


>sp|CDC6_METMJ|ORC1-TYPE DNA replication protein|Methanoculleus marisnigri (strain ATCC

Query: 3 EIGDARRA 10
E GDARRA
Sbjct: 263 EHGDARRA 270


>sp|CDC6_METHJ|ORC1-TYPE DNA replication protein|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 EIGDARRA 10
E GDARRA
Sbjct: 263 EHGDARRA 270


>sp|CDC6_CENSY|ORC1-TYPE DNA replication protein|Cenarchaeum symbiosum (strain A)

Query: 3 EIGDARRA 10
E GDARRA
Sbjct: 265 EHGDARRA 272


>sp|CDC67_HALSA|ORC1-TYPE DNA replication protein 7|Halobacterium salinarum (strain ATCC

Query: 3 EIGDARRA 10
E GDARRA
Sbjct: 355 EHGDARRA 362


>sp|GVPC_HALMT|GAS vesicle protein C|Haloferax mediterranei (strain ATCC 33500

Query: 1 QSEIGDARRA 10
Q E+GD R+A
Sbjct: 218 QREMGDYRKA 227


>sp|CDC6_DESA1|ORC1-TYPE DNA replication protein|Desulfurococcus amylolyticus (strain DSM

Query: 3 EIGDARRA 10
E GDARRA
Sbjct: 249 EHGDARRA 256


>sp|CAPPA_ARCFU|PHOSPHOENOLPYRUVATE carboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 EIGDARRA 10
E GD RRA
Sbjct: 283 EFGDVRRA 290


>sp|CDC6M_HALMA|ORC1-TYPE DNA replication protein 13|Haloarcula marismortui (strain ATCC

Query: 3 EIGDARRA 10
E GDARRA
Sbjct: 267 EHGDARRA 274


>sp|CDC6B_HALMA|ORC1-TYPE DNA replication protein 2|Haloarcula marismortui (strain ATCC 43049

Query: 5 GDARRA 10
GDARRA
Sbjct: 246 GDARRA 251


>sp|CDC61_SULTO|ORC1-TYPE DNA replication protein 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 GDARRA 10
GDARRA
Sbjct: 247 GDARRA 252


>sp|CDC61_AERPE|ORC1-TYPE DNA replication protein 1|Aeropyrum pernix (strain ATCC 700893

Query: 3 EIGDARRA 10
E GDARRA
Sbjct: 246 EHGDARRA 253


>sp|HTR18_HALS3|TRANSDUCER protein Htr18|Halobacterium salinarum (strain ATCC 29341

Query: 3 EIGDARRA 10
E+GD RR+
Sbjct: 336 EVGDLRRS 343


>sp|RFCS_METKA|REPLICATION factor C small subunit|Methanopyrus kandleri (strain AV19 /

Query: 5 GDARRA 10
GDARRA
Sbjct: 331 GDARRA 336


>sp|CDC61_SULAC|ORC1-TYPE DNA replication protein 1|Sulfolobus acidocaldarius (strain ATCC

Query: 5 GDARRA 10
GDARRA
Sbjct: 247 GDARRA 252




401|Sequence|2001|2010|DARRAKVYGR

>sp|NIFH1_METTL|NITROGENASE iron protein 1|Methanothermococcus thermolithotrophicus

Query: 1 DARRAKVYGR 10
DA++ +YG+
Sbjct: 9 DAKKVAIYGK 18


>sp|DHYS_THEAC|PROBABLE deoxyhypusine synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DARRAKVYG 9
DAR VYG
Sbjct: 288 DARYVNVYG 296


>sp|PELO_DESA1|PROTEIN pelota homolog|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 DARRAKVY 8
D RRA+VY
Sbjct: 302 DERRARVY 309




402|Sequence|2006|2015|KVYGRGLSEG

>sp|SYA_HYPBU|ALANINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 VYGRGLSE 9
+YGRGL+E
Sbjct: 891 LYGRGLAE 898


>sp|TRPC_METTM|INDOLE-3-GLYCEROL phosphate synthase|Methanothermobacter marburgensis (strain ATCC

Query: 1 KVYGRGLSE 9
+ YGRGL E
Sbjct: 64 RTYGRGLHE 72


>sp|RLME_METPE|RIBOSOMAL RNA large subunit methyltransferase|Methanosphaerula palustris

Query: 1 KVYGRGLSEG 10
KVY R ++EG
Sbjct: 9 KVYRRAMNEG 18


>sp|Y457_METJA|UNCHARACTERIZED metallohydrolase MJ0457|Methanocaldococcus jannaschii (strain ATCC

Query: 1 KVYGRG 6
K+YGRG
Sbjct: 112 KIYGRG 117


>sp|DNLI_PICTO|DNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 KVYGRGLSE 9
K++ RGL E
Sbjct: 266 KIFSRGLEE 274


>sp|RS14Z_ARCFU|SMALL ribosomal subunit protein uS14|Archaeoglobus fulgidus (strain

Query: 1 KVYGRGLSE 9
KV+GRG +E
Sbjct: 7 KVFGRGANE 15


>sp|HPRT_METZD|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanosalsum zhilinae (strain DSM 4017

Query: 1 KVYGRGLSEG 10
K+Y G+SEG
Sbjct: 105 KLYVNGISEG 114


>sp|ADEC_METTH|ADENINE deaminase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 VYGRGLSEG 10
V+G GL EG
Sbjct: 409 VHGFGLQEG 417


>sp|LEUC_METTH|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanothermobacter

Query: 1 KVYGRGLSEG 10
+VY R L EG
Sbjct: 333 EVYRRALDEG 342


>sp|PUR5_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GRGLSEG 10
G+GL+EG
Sbjct: 115 GKGLNEG 121




403|Sequence|2011|2020|GLSEGRTFEM

>sp|PYRE_METMJ|OROTATE phosphoribosyltransferase|Methanoculleus marisnigri (strain ATCC

Query: 2 LSEGRTFEM 10
++EGR FEM
Sbjct: 51 IAEGREFEM 59


>sp|KCY_METLZ|CYTIDYLATE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 GLSEGRTFEM 10
GL+E + FEM
Sbjct: 113 GLTEKQAFEM 122


>sp|PGP_METHJ|PHOSPHOGLYCOLATE phosphatase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GLSEGRTFEM 10
G+ +GRTF +
Sbjct: 152 GIDKGRTFHI 161


>sp|COFE_HALLT|COENZYME F420:L-glutamate ligase|Halorubrum lacusprofundi (strain ATCC

Query: 3 SEGRTFEM 10
+EGRTF++
Sbjct: 44 AEGRTFDL 51


>sp|PPSA_AERPE|PHOSPHOENOLPYRUVATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GLSEGRTFEM 10
GLS GR F++
Sbjct: 675 GLSRGRDFKV 684


>sp|Y2198_SACI3|UPF0282 protein M1627_2198|Saccharolobus islandicus (strain M.16.27)

Query: 2 LSEGRTFEM 10
+++G+TFE+
Sbjct: 129 IADGKTFEV 137


>sp|Y2122_SACI6|UPF0282 protein M164_2122|Saccharolobus islandicus (strain M.16.4 /

Query: 2 LSEGRTFEM 10
+++G+TFE+
Sbjct: 129 IADGKTFEV 137


>sp|Y2116_SACI4|UPF0282 protein M1425_2116|Saccharolobus islandicus (strain M.14.25 /

Query: 2 LSEGRTFEM 10
+++G+TFE+
Sbjct: 129 IADGKTFEV 137


>sp|RIFK_METHJ|RIBOFLAVIN kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 SEGRTF 8
SEGRTF
Sbjct: 160 SEGRTF 165


>sp|TRPE_THEKO|ANTHRANILATE synthase component 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GLSEGRTFEM 10
G EGRTF++
Sbjct: 239 GSVEGRTFKI 248




404|Sequence|2016|2025|RTFEMSDFIV

>sp|COFE_HALLT|COENZYME F420:L-glutamate ligase|Halorubrum lacusprofundi (strain ATCC

Query: 1 RTFEMSDF 8
RTF++SDF
Sbjct: 47 RTFDLSDF 54


>sp|YPV5B_METTF|UNCHARACTERIZED protein ORF5B|Methanothermobacter thermautotrophicus

Query: 1 RTFEMSDFI 9
RT E+SD++
Sbjct: 180 RTGELSDYV 188


>sp|SYC_METBF|CYSTEINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 RTFEMSDFIV 10
RTF M+D IV
Sbjct: 42 RTFLMADNIV 51


>sp|Y980_PYRAB|UPF0282 protein PYRAB09800|Pyrococcus abyssi (strain GE5 /

Query: 1 RTFEMSDFIV 10
+TF+ +FI+
Sbjct: 141 KTFDFGEFII 150




405|Sequence|2021|2030|SDFIVDTRDA

>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 DFIVDTRDA 10
DF+VD +D+
Sbjct: 774 DFVVDKKDS 782


>sp|MOAA_METTH|PROBABLE GTP 3',8-cyclase|Methanothermobacter thermautotrophicus (strain

Query: 1 SDFIVDTRDA 10
+D +VDTRDA
Sbjct: 270 NDNLVDTRDA 279


>sp|RL23_METAC|LARGE ribosomal subunit protein uL23|Methanosarcina acetivorans (strain

Query: 3 FIVDTR 8
FIVDTR
Sbjct: 24 FIVDTR 29


>sp|RL23_METMA|LARGE ribosomal subunit protein uL23|Methanosarcina mazei (strain ATCC

Query: 3 FIVDTR 8
FIVDTR
Sbjct: 24 FIVDTR 29


>sp|SYW2_HALSA|TRYPTOPHAN--TRNA ligase 2|Halobacterium salinarum (strain ATCC 700922

Query: 4 IVDTRDA 10
+VDTRDA
Sbjct: 144 VVDTRDA 150


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 DFIVDTRD 9
DF+ D+RD
Sbjct: 440 DFVRDSRD 447


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 DFIVDTRD 9
DF+ D RD
Sbjct: 440 DFVSDARD 447


>sp|RL23_METBF|LARGE ribosomal subunit protein uL23|Methanosarcina barkeri (strain

Query: 3 FIVDTR 8
FIVDTR
Sbjct: 24 FIVDTR 29


>sp|RL13_HALMA|LARGE ribosomal subunit protein uL13|Haloarcula marismortui (strain

Query: 1 SDFIVDTRD 9
+D IVD RD
Sbjct: 8 ADVIVDARD 16




406|Sequence|2026|2035|DTRDAGYGGI

>sp|RS3_THEON|SMALL ribosomal subunit protein uS3|Thermococcus onnurineus (strain

Query: 1 DTRDAGYGGI 10
+ R AGYGGI
Sbjct: 24 ELRRAGYGGI 33


>sp|RS3_THEGJ|SMALL ribosomal subunit protein uS3|Thermococcus gammatolerans (strain

Query: 1 DTRDAGYGGI 10
+ R AGYGGI
Sbjct: 24 ELRRAGYGGI 33


>sp|RS3_THESM|SMALL ribosomal subunit protein uS3|Thermococcus sibiricus (strain DSM

Query: 1 DTRDAGYGGI 10
+ R AGYGG+
Sbjct: 24 ELRRAGYGGL 33


>sp|RS3_PYRFU|SMALL ribosomal subunit protein uS3|Pyrococcus furiosus (strain ATCC

Query: 1 DTRDAGYGGI 10
+ R AGYGG+
Sbjct: 24 ELRRAGYGGL 33


>sp|PELO_METLZ|PROTEIN pelota homolog|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 DTRDAGYGGI 10
DTR GYG +
Sbjct: 223 DTRRCGYGAV 232


>sp|RS3_PYRAB|SMALL ribosomal subunit protein uS3|Pyrococcus abyssi (strain GE5 /

Query: 1 DTRDAGYGGI 10
+ R AGYGG+
Sbjct: 24 ELRRAGYGGL 33


>sp|RS3_PYRHO|SMALL ribosomal subunit protein uS3|Pyrococcus horikoshii (strain ATCC

Query: 1 DTRDAGYGGI 10
+ R AGYGG+
Sbjct: 24 ELRRAGYGGL 33


>sp|PYRC_SULTO|DIHYDROOROTASE tokodaii (strain DSM 16993

Query: 2 TRDAGYGGI 10
T +A YGGI
Sbjct: 69 TSEAAYGGI 77


>sp|PYRC_SACS2|DIHYDROOROTASE solfataricus (strain ATCC 35092

Query: 2 TRDAGYGGI 10
T +A YGGI
Sbjct: 72 TSEASYGGI 80


>sp|RS3_THEKO|SMALL ribosomal subunit protein uS3|Thermococcus kodakarensis (strain

Query: 1 DTRDAGYGGI 10
+ R AGYGG+
Sbjct: 24 ELRRAGYGGL 33


>sp|Y2966_METMA|UPF0282 protein MM_2966|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 TRDAGYGGI 10
TRD G+G +
Sbjct: 150 TRDKGFGTV 158


>sp|ACEA_HALVD|ISOCITRATE lyase|Haloferax volcanii (strain ATCC 29605

Query: 4 DAGYGGI 10
D GYGGI
Sbjct: 100 DTGYGGI 106


>sp|RS3_STAMF|SMALL ribosomal subunit protein uS3|Staphylothermus marinus (strain

Query: 3 RDAGYGGI 10
+DAGY G+
Sbjct: 29 KDAGYAGM 36


>sp|AROD_SACS2|3-DEHYDROQUINATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 RDAGYGGI 10
RD G GGI
Sbjct: 63 RDKGEGGI 70


>sp|RISC_METTM|RIBOFLAVIN synthase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 2 TRDAGYG 8
TRDAG G
Sbjct: 136 TRDAGMG 142


>sp|NADM_SULTO|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DTRDAGY 7
D R+AGY
Sbjct: 108 DAREAGY 114


>sp|RADA_IGNH4|DNA repair and recombination protein|Ignicoccus hospitalis (strain

Query: 4 DAGYGGI 10
DAGYG I
Sbjct: 30 DAGYGTI 36


>sp|RS3_ARCFU|SMALL ribosomal subunit protein uS3|Archaeoglobus fulgidus (strain ATCC

Query: 1 DTRDAGYGGI 10
+ R AG+GG+
Sbjct: 24 EVRSAGFGGV 33


>sp|RS3_METBF|SMALL ribosomal subunit protein uS3|Methanosarcina barkeri (strain

Query: 5 AGYGGI 10
AGYGG+
Sbjct: 28 AGYGGM 33


>sp|RADA_METTH|DNA repair and recombination protein|Methanothermobacter

Query: 3 RDAGYG 8
RDAG+G
Sbjct: 19 RDAGFG 24


>sp|RS3_METST|SMALL ribosomal subunit protein uS3|Methanosphaera stadtmanae (strain

Query: 5 AGYGGI 10
AGYGG+
Sbjct: 27 AGYGGM 32


>sp|RS3_METMA|SMALL ribosomal subunit protein uS3|Methanosarcina mazei (strain ATCC

Query: 5 AGYGGI 10
AGYGG+
Sbjct: 28 AGYGGM 33


>sp|ALF1_THETK|FRUCTOSE-BISPHOSPHATE aldolase class 1|Thermoproteus tenax (strain ATCC 35583

Query: 3 RDAGYGGI 10
RDAG+ G+
Sbjct: 51 RDAGFDGV 58


>sp|RADA_METMJ|DNA repair and recombination protein|Methanoculleus marisnigri

Query: 3 RDAGYGGI 10
R+AGYG +
Sbjct: 21 REAGYGTV 28


>sp|S1PNA_SULTO|BIFUNCTIONAL sugar-1-phosphate

Query: 3 RDAGYG 8
RD GYG
Sbjct: 391 RDVGYG 396


>sp|RS3_METMJ|SMALL ribosomal subunit protein uS3|Methanoculleus marisnigri (strain

Query: 1 DTRDAGYGGI 10
+ + AGYGG+
Sbjct: 24 ELKRAGYGGM 33


>sp|ASST_METAC|L-ASPARTATE semialdehyde sulfurtransferase|Methanosarcina acetivorans (strain

Query: 1 DTRDAGYGG 9
DTR YGG
Sbjct: 99 DTRGIQYGG 107


>sp|RS3_METLZ|SMALL ribosomal subunit protein uS3|Methanocorpusculum labreanum

Query: 1 DTRDAGYGGI 10
+ + AGYGG+
Sbjct: 24 ELKRAGYGGM 33


>sp|RS3_METKA|SMALL ribosomal subunit protein uS3|Methanopyrus kandleri (strain AV19

Query: 5 AGYGGI 10
AGYGG+
Sbjct: 35 AGYGGM 40




407|Sequence|2031|2040|GYGGISLAVE

>sp|RFCL_NANEQ|REPLICATION factor C large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 GYGGISLA 8
YGGI+LA
Sbjct: 338 AYGGIALA 345


>sp|Y1393_METJA|UNCHARACTERIZED protein MJ1393|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GYGGISLAVE 10
GYGG+S E
Sbjct: 294 GYGGVSATKE 303


>sp|AROE_METMA|SHIKIMATE dehydrogenase (NADP(+))|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GYGGISLAV 9
G+GGI+L V
Sbjct: 55 GFGGINLTV 63


>sp|RNP3_METMA|RIBONUCLEASE P protein component 3|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GYGGISLA 8
GY GI+LA
Sbjct: 32 GYSGIALA 39


>sp|URIC_HALVD|URICASE volcanii (strain ATCC 29605

Query: 1 GYGGISL 7
GYG ISL
Sbjct: 142 GYGSISL 148


>sp|AATA_METMJ|A-TYPE ATP synthase subunit A|Methanoculleus marisnigri (strain ATCC

Query: 1 GYGGISLAVE 10
G G+SLAVE
Sbjct: 71 GNTGLSLAVE 80




408|Sequence|2036|2045|SLAVEGPSKV

>sp|RPO3_METKA|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanopyrus kandleri (strain AV19 /

Query: 2 LAVEGPSKV 10
L VEGP+KV
Sbjct: 103 LEVEGPTKV 111


>sp|IF2P_METS5|PROBABLE translation initiation factor IF-2|Metallosphaera sedula (strain

Query: 3 AVEGPSK 9
AVEGP+K
Sbjct: 231 AVEGPAK 237


>sp|Y1555_ARCFU|UNCHARACTERIZED protein AF_1555|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SLAVEGPSKV 10
SLA + PSKV
Sbjct: 62 SLAAKEPSKV 71


>sp|PRIS_HYPBU|DNA primase small subunit PriS|Hyperthermus butylicus (strain DSM 5456

Query: 3 AVEGPS 8
AVEGPS
Sbjct: 254 AVEGPS 259




409|Sequence|2041|2050|GPSKVDIQTE

>sp|SYE_KORCO|GLUTAMATE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 GPSKVD 6
GPSKVD
Sbjct: 385 GPSKVD 390


>sp|RL11_NATPD|LARGE ribosomal subunit protein uL11|Natronomonas pharaonis (strain

Query: 1 GPSKVDIQ 8
GP+ VD+Q
Sbjct: 25 GPTPVDVQ 32


>sp|RL11_HALSA|LARGE ribosomal subunit protein uL11|Halobacterium salinarum (strain

Query: 1 GPSKVDIQT 9
GP+ VD+Q
Sbjct: 25 GPTPVDVQA 33


>sp|RL11_HALS3|LARGE ribosomal subunit protein uL11|Halobacterium salinarum (strain

Query: 1 GPSKVDIQT 9
GP+ VD+Q
Sbjct: 25 GPTPVDVQA 33


>sp|RL11_HALMA|LARGE ribosomal subunit protein uL11|Haloarcula marismortui (strain

Query: 1 GPSKVDIQT 9
GP+ VD+Q
Sbjct: 25 GPTPVDVQA 33


>sp|RL11_HALWD|LARGE ribosomal subunit protein uL11|Haloquadratum walsbyi (strain DSM

Query: 1 GPSKVDIQ 8
GP+ VD+Q
Sbjct: 25 GPTPVDVQ 32


>sp|RL11_HALLT|LARGE ribosomal subunit protein uL11|Halorubrum lacusprofundi (strain

Query: 1 GPSKVDIQ 8
GP+ VD+Q
Sbjct: 25 GPTPVDVQ 32


>sp|RL11_HALVD|LARGE ribosomal subunit protein uL11|Haloferax volcanii (strain ATCC

Query: 1 GPSKVDIQ 8
GP+ VD+Q
Sbjct: 25 GPTPVDVQ 32


>sp|FLAB2_THEKO|FLAGELLIN B2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GPSKVDIQTE 10
GP+ VDI E
Sbjct: 409 GPNVVDIYAE 418


>sp|Y094_METJA|UNCHARACTERIZED protein MJ0094|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GPSKVDI 7
GP K+DI
Sbjct: 166 GPEKIDI 172


>sp|Y2225_ARCFU|UNCHARACTERIZED protein AF_2225|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PSKVDIQT 9
PSK+ IQT
Sbjct: 163 PSKLGIQT 170




410|Sequence|2046|2055|DIQTEDLEDG

>sp|IXTPA_PYRHO|DITP/XTP pyrophosphatase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DIQTEDLED 9
+IQ E LED
Sbjct: 36 EIQAEKLED 44


>sp|RL1_NANEQ|LARGE ribosomal subunit protein uL1|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 IQTEDLED 9
I TED+ED
Sbjct: 165 IGTEDMED 172


>sp|DAPA_HALMA|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 IQTEDLED 9
++TEDLED
Sbjct: 292 LETEDLED 299


>sp|IXTPA_SACS2|DITP/XTP pyrophosphatase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DIQTEDLED 9
+IQ++DLE+
Sbjct: 41 EIQSDDLEE 49




411|Sequence|2051|2060|DLEDGTCKVS

>sp|FLPA_STAMF|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Staphylothermus marinus (strain

Query: 1 DLEDGTCKVS 10
+LEDG+ K++
Sbjct: 20 ELEDGSVKLA 29


>sp|AGL10_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl10|Haloferax volcanii

Query: 2 LEDGTCKV 9
L D TCKV
Sbjct: 5 LYDNTCKV 12


>sp|RPO8_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo8|Sulfolobus acidocaldarius (strain

Query: 5 GTCKVS 10
GTCK+S
Sbjct: 4 GTCKIS 9


>sp|SYP_HALWD|PROLINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DLEDGTCKV 9
DL D TC V
Sbjct: 489 DLTDSTCVV 497


>sp|HIS1_NATPD|ATP phosphoribosyltransferase|Natronomonas pharaonis (strain ATCC

Query: 1 DLEDGTCKV 9
DLE G+C++
Sbjct: 84 DLEFGSCRL 92


>sp|MTSB_METBA|METHYLATED-THIOL--CORRINOID protein MtsB|Methanosarcina barkeri

Query: 1 DLEDGTCKVS 10
DLEDG +V+
Sbjct: 38 DLEDGNKEVT 47




412|Sequence|2056|2065|TCKVSYFPTV

>sp|Y1005_METKA|PUTATIVE HTH-type transcriptional regulatory protein|Methanopyrus kandleri

Query: 2 CKVSYFPTV 10
CK +Y PT+
Sbjct: 249 CKDTYVPTI 257


>sp|CBIA_METS3|COBYRINATE a,c-diamide synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 TCKVSYF 7
+CKV YF
Sbjct: 270 SCKVEYF 276


>sp|FPRA_METAZ|COENZYME F420H(2) oxidase|Methanobrevibacter arboriphilus

Query: 1 TCKVSYFP 8
TC+V Y P
Sbjct: 381 TCEVYYVP 388


>sp|NUCS_SACS2|ENDONUCLEASE NucS|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TCKVSY 6
TCKV+Y
Sbjct: 31 TCKVNY 36


>sp|RPO3_METST|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosphaera stadtmanae (strain ATCC

Query: 1 TCKVSYFPTV 10
TC Y+P +
Sbjct: 160 TCGYKYYPKI 169


>sp|NUCS_SACI7|ENDONUCLEASE NucS|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 TCKVSY 6
TCKV+Y
Sbjct: 31 TCKVNY 36


>sp|NUCS_SACI4|ENDONUCLEASE NucS|Saccharolobus islandicus (strain M.14.25 /

Query: 1 TCKVSY 6
TCKV+Y
Sbjct: 31 TCKVNY 36


>sp|NUCS_SACI3|ENDONUCLEASE NucS|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 TCKVSY 6
TCKV+Y
Sbjct: 31 TCKVNY 36


>sp|NUCS_SACI2|ENDONUCLEASE NucS|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 TCKVSY 6
TCKV+Y
Sbjct: 31 TCKVNY 36


>sp|NUCS_SACI1|ENDONUCLEASE NucS|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 TCKVSY 6
TCKV+Y
Sbjct: 31 TCKVNY 36


>sp|Y1068_METJA|UNCHARACTERIZED membrane protein MJ1068|Methanocaldococcus jannaschii (strain ATCC

Query: 4 VSYFPTV 10
++YFPTV
Sbjct: 332 MAYFPTV 338




413|Sequence|2061|2070|YFPTVPGVYI

>sp|ORNAT_THEKO|ORNITHINE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 YFPTVPGV 8
+FPT+PGV
Sbjct: 172 FFPTMPGV 179


>sp|UVRC_HALLT|UVRABC system protein C|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 FPTVPGVY 9
PT PGVY
Sbjct: 13 LPTEPGVY 20


>sp|ORNAT_PYRHO|ORNITHINE aminotransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 FPTVPGV 8
FPT+PGV
Sbjct: 173 FPTMPGV 179


>sp|UVRC_METBU|UVRABC system protein C|Methanococcoides burtonii (strain DSM 6242

Query: 3 PTVPGVYI 10
P +PGVY+
Sbjct: 9 PELPGVYL 16


>sp|PYRH_HALMA|URIDYLATE kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 YFPTVPGVY 9
Y +VPGVY
Sbjct: 138 YATSVPGVY 146


>sp|UVRC_METST|UVRABC system protein C|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 PTVPGVYI 10
P PGVYI
Sbjct: 10 PQKPGVYI 17


>sp|HEM3_AERPE|PROBABLE porphobilinogen deaminase|Aeropyrum pernix (strain ATCC 700893

Query: 1 YFPTVPG 7
YFP PG
Sbjct: 190 YFPPAPG 196


>sp|RL2_CALMQ|LARGE ribosomal subunit protein uL2|Caldivirga maquilingensis (strain

Query: 1 YFPTVPGVYI 10
Y P V GVY+
Sbjct: 71 YLPAVEGVYV 80


>sp|FAU1_THEPD|PROBABLE ribonuclease FAU-1|Thermofilum pendens (strain DSM 2475

Query: 1 YFPTVP 6
Y+PT+P
Sbjct: 257 YYPTLP 262


>sp|Y1209_CALMQ|PROTEIN Cmaq_1209|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 TVPGVYI 10
T PGVYI
Sbjct: 133 TAPGVYI 139


>sp|UVRC_HALMA|UVRABC system protein C|Haloarcula marismortui (strain ATCC 43049

Query: 2 FPTVPGVYI 10
P PGVY+
Sbjct: 13 LPREPGVYL 21


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 2 FPTVPG 7
FP VPG
Sbjct: 214 FPAVPG 219


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 2 FPTVPG 7
FP VPG
Sbjct: 214 FPAVPG 219


>sp|HPCAS_SULTO|3-HYDROXYPROPIONYL-COENZYME A synthetase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YFPTVPGVY 9
YF PG+Y
Sbjct: 496 YFSKFPGIY 504


>sp|SYL_PYRIL|LEUCINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 FPTVPGVYI 10
P PG+YI
Sbjct: 935 LPLKPGIYI 943




414|Sequence|2066|2075|PGVYIVSTKF

>sp|UVRC_METST|UVRABC system protein C|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PGVYIVSTK 9
PGVYI+ K
Sbjct: 13 PGVYIMHNK 21


>sp|FLPA_PYRAB|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 PGVYIV 6
PGVYIV
Sbjct: 10 PGVYIV 15


>sp|RFCL_IGNH4|REPLICATION factor C large subunit|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 PGVYIVSTKF 10
PGV + TK+
Sbjct: 319 PGVALAKTKY 328


>sp|FLPA_THEGJ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus gammatolerans

Query: 1 PGVYIV 6
PGVYIV
Sbjct: 9 PGVYIV 14


>sp|FLPA_THEKO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus kodakarensis

Query: 1 PGVYIV 6
PGVYIV
Sbjct: 9 PGVYIV 14


>sp|Y2030_SACS2|PUTATIVE ABC transporter ATP-binding protein|Saccharolobus solfataricus

Query: 2 GVYIVSTKF 10
G+Y+++TK
Sbjct: 294 GIYLINTKI 302




415|Sequence|2071|2080|VSTKFADEHV

>sp|RL15_PYRFU|LARGE ribosomal subunit protein uL15|Pyrococcus furiosus (strain ATCC

Query: 1 VSTKFADEHV 10
V+ KF DEH+
Sbjct: 76 VNLKFIDEHL 85


>sp|RL15_PYRHO|LARGE ribosomal subunit protein uL15|Pyrococcus horikoshii (strain ATCC

Query: 1 VSTKFADEHV 10
V+ KF DEH+
Sbjct: 76 VTLKFIDEHL 85


>sp|SYV_NATPD|VALINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 TKFADEHV 10
TKFA EH+
Sbjct: 582 TKFASEHI 589


>sp|HISX_METBF|HISTIDINOL dehydrogenase|Methanosarcina barkeri (strain Fusaro /

Query: 2 STKFADEHV 10
S KFA EH+
Sbjct: 320 SNKFAPEHL 328


>sp|HISX_METMA|HISTIDINOL dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 STKFADEHV 10
S KFA EH+
Sbjct: 320 SNKFAPEHL 328


>sp|HISX_METAC|HISTIDINOL dehydrogenase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 STKFADEHV 10
S KFA EH+
Sbjct: 320 SNKFAPEHL 328


>sp|GATE_PYRHO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus horikoshii (strain ATCC

Query: 1 VSTKFADE 8
V TKF+DE
Sbjct: 34 VPTKFSDE 41


>sp|TRMY_METAR|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanocella arvoryzae

Query: 1 VSTKFADEHV 10
V+ KF+ EHV
Sbjct: 64 VTIKFSGEHV 73


>sp|HISX_ARCFU|HISTIDINOL dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VSTKFADEHV 10
+S +FA EH+
Sbjct: 293 ISNEFAPEHL 302


>sp|CDC66_HALSA|ORC1-TYPE DNA replication protein 6|Halobacterium salinarum (strain ATCC

Query: 3 TKFADEHV 10
T F DEHV
Sbjct: 15 TVFRDEHV 22




416|Sequence|2076|2085|ADEHVPGSPF

>sp|NTPTH_THEKO|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 HVPGSPF 10
H+PG PF
Sbjct: 71 HLPGVPF 77


>sp|RS4_AERPE|SMALL ribosomal subunit protein uS4|Aeropyrum pernix (strain ATCC 700893

Query: 3 EHVPGSPF 10
++ PGSPF
Sbjct: 154 DYAPGSPF 161


>sp|PSA_PYRAE|PROTEASOME subunit alpha|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 DEHVPGSP 9
DEHV SP
Sbjct: 72 DEHVAASP 79


>sp|PRIS_METBU|DNA primase small subunit PriS|Methanococcoides burtonii (strain DSM

Query: 3 EHVPGSP 9
+H+PG+P
Sbjct: 102 DHIPGAP 108


>sp|FAU1_CALMQ|PROBABLE ribonuclease FAU-1|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 DEHVPGSPF 10
DE++PG+ F
Sbjct: 52 DENIPGALF 60


>sp|Y1577_METJA|UNCHARACTERIZED protein MJ1577|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ADEHVP 6
ADEH+P
Sbjct: 178 ADEHLP 183


>sp|RS13_HALWD|SMALL ribosomal subunit protein uS13|Haloquadratum walsbyi (strain DSM

Query: 2 DEHVPG 7
D+H+PG
Sbjct: 84 DDHIPG 89


>sp|Y811_METTH|UPF0305 protein MTH_811|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 HVPGSPF 10
H PG+PF
Sbjct: 109 HPPGTPF 115


>sp|RS4_METM7|SMALL ribosomal subunit protein uS4|Methanococcus maripaludis (strain C7

Query: 1 ADEHVPGSP 9
A E+VP SP
Sbjct: 152 AIEYVPNSP 160


>sp|RS4_METM6|SMALL ribosomal subunit protein uS4|Methanococcus maripaludis (strain C6

Query: 1 ADEHVPGSP 9
A E+VP SP
Sbjct: 152 AIEYVPNSP 160


>sp|RS4_METM5|SMALL ribosomal subunit protein uS4|Methanococcus maripaludis (strain C5

Query: 1 ADEHVPGSP 9
A E+VP SP
Sbjct: 152 AIEYVPNSP 160


>sp|MTMB_METMA|MONOMETHYLAMINE methyltransferase MtmB|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 VPGSPF 10
+PGSP+
Sbjct: 170 IPGSPY 175


>sp|DABA_NATPD|PROBABLE inorganic carbon transporter subunit|Natronomonas pharaonis (strain

Query: 2 DEHVPGS 8
DEHVP S
Sbjct: 430 DEHVPSS 436


>sp|Y160_METLZ|PUTATIVE HTH-type transcriptional regulatory protein|Methanocorpusculum

Query: 2 DEHVPGS 8
+EHVP S
Sbjct: 196 EEHVPAS 202


>sp|ARCA_HALS3|ARGININE deiminase|Halobacterium salinarum (strain ATCC 29341

Query: 1 ADEHVPGS 8
+DE VPGS
Sbjct: 147 SDEEVPGS 154


>sp|DTDA_METKA|D-AMINOACYL-TRNA deacylase|Methanopyrus kandleri (strain AV19 /

Query: 4 HVPGSP 9
HVPG+P
Sbjct: 92 HVPGNP 97


>sp|DPHB_STAMF|DIPHTHINE synthase|Staphylothermus marinus (strain ATCC 43588

Query: 5 VPGSPF 10
VPG PF
Sbjct: 84 VPGDPF 89


>sp|PRIS_PICTO|DNA primase small subunit PriS|Picrophilus torridus (strain ATCC 700027

Query: 3 EHVPGS 8
+H+PGS
Sbjct: 96 DHIPGS 101


>sp|DLDH_HALVD|DIHYDROLIPOYL dehydrogenase|Haloferax volcanii (strain ATCC 29605

Query: 1 ADEHVPGSPF 10
A EHV G P
Sbjct: 337 AAEHVAGEPV 346




417|Sequence|2081|2090|PGSPFTVKIS

>sp|Y1289_ARCFU|PUTATIVE GTPase AF_1289|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PGSPFT 6
PGSPFT
Sbjct: 84 PGSPFT 89


>sp|RNJ_HALSA|RIBONUCLEASE J|Halobacterium salinarum (strain ATCC 700922

Query: 2 GSPFTVKI 9
GSPFT+++
Sbjct: 103 GSPFTIEL 110


>sp|HTR9_HALSA|HALOBACTERIAL transducer protein 9|Halobacterium salinarum (strain ATCC 700922

Query: 2 GSPFTVKI 9
GSPFTV +
Sbjct: 9 GSPFTVPL 16


>sp|RS4_AERPE|SMALL ribosomal subunit protein uS4|Aeropyrum pernix (strain ATCC 700893

Query: 1 PGSPF 5
PGSPF
Sbjct: 157 PGSPF 161


>sp|ASSY_METS5|ARGININOSUCCINATE synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 PGSPFTVKIS 10
P SP++ KIS
Sbjct: 349 PYSPYSEKIS 358


>sp|HEM3_SACI7|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain

Query: 1 PGSPFTV 7
PG P+T+
Sbjct: 268 PGDPYTI 274


>sp|HEM3_SACI6|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 PGSPFTV 7
PG P+T+
Sbjct: 268 PGDPYTI 274


>sp|HEM3_SACI2|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain L.S.2.15

Query: 1 PGSPFTV 7
PG P+T+
Sbjct: 268 PGDPYTI 274


>sp|HEM3_SACI4|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain M.14.25

Query: 1 PGSPFTV 7
PG P+T+
Sbjct: 268 PGDPYTI 274


>sp|HEM3_SACI3|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain M.16.27)

Query: 1 PGSPFTV 7
PG P+T+
Sbjct: 268 PGDPYTI 274


>sp|HEM3_SACI1|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain

Query: 1 PGSPFTV 7
PG P+T+
Sbjct: 268 PGDPYTI 274


>sp|ILVD_METKA|DIHYDROXY-ACID dehydratase|Methanopyrus kandleri (strain AV19 /

Query: 1 PGSPFTVK 8
PG P+T++
Sbjct: 305 PGGPYTMR 312


>sp|RNJ_PYRAB|RIBONUCLEASE J|Pyrococcus abyssi (strain GE5 /

Query: 2 GSPFTVKIS 10
G+P+T++++
Sbjct: 107 GTPYTIRLA 115


>sp|RLME_HALLT|RIBOSOMAL RNA large subunit methyltransferase|Halorubrum lacusprofundi

Query: 1 PGSPFTVKI 9
PG F VK+
Sbjct: 144 PGGDFVVKV 152




418|Sequence|2086|2095|TVKISGEGRV

>sp|SPEE_AERPE|POLYAMINE aminopropyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 2 VKISGEGRV 10
V++SGEG+V
Sbjct: 47 VRVSGEGKV 55


>sp|NCPPR_PYRHO|NAD(P)H coenzyme A polysulfide/persulfide reductase|Pyrococcus horikoshii

Query: 1 TVKISGEGRV 10
T+KI GE RV
Sbjct: 215 TMKIEGEERV 224


>sp|Y1117_AERPE|UPF0173 metal-dependent hydrolase APE_1117|Aeropyrum pernix (strain ATCC

Query: 2 VKISGEGRV 10
V I+GEGRV
Sbjct: 136 VIITGEGRV 144


>sp|RL6_METJA|LARGE ribosomal subunit protein uL6|Methanocaldococcus jannaschii (strain

Query: 1 TVKISGE 7
TVKISGE
Sbjct: 129 TVKISGE 135


>sp|TRUA_METST|TRNA pseudouridine synthase A|Methanosphaera stadtmanae (strain ATCC

Query: 2 VKISGEGRV 10
+KI GE RV
Sbjct: 87 IKIIGEARV 95


>sp|SYFA_METKA|PHENYLALANINE--TRNA ligase alpha subunit|Methanopyrus kandleri (strain AV19 /

Query: 3 KISGEGRV 10
KI GEGR+
Sbjct: 91 KIGGEGRL 98


>sp|KDAD_SACS2|2-DEHYDRO-3-DEOXY-D-ARABINONATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TVKISGEGRV 10
T+KI EGRV
Sbjct: 214 TLKIVREGRV 223


>sp|SYE_CALMQ|GLUTAMATE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 VKISGEG 8
+KI+GEG
Sbjct: 460 IKITGEG 466


>sp|RL6_METM6|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain C6

Query: 1 TVKISGE 7
TVK+SGE
Sbjct: 129 TVKVSGE 135


>sp|RL6_METMP|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain DSM

Query: 1 TVKISGE 7
TVK+SGE
Sbjct: 129 TVKVSGE 135


>sp|RL6_METM7|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain C7

Query: 1 TVKISGE 7
TVK+SGE
Sbjct: 129 TVKVSGE 135


>sp|RL6_METM5|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain C5

Query: 1 TVKISGE 7
TVK+SGE
Sbjct: 129 TVKVSGE 135


>sp|ATGT_METHJ|TRNA-GUANINE(15) transglycosylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 KISGEGRV 10
K+SG+G++
Sbjct: 18 KLSGQGKI 25


>sp|SCAF_METJA|DUF35 domain-containing scaffold protein|Methanocaldococcus jannaschii

Query: 2 VKISGEGRV 10
+K+SG+G+V
Sbjct: 56 IKLSGKGKV 64


>sp|SCAF_METTH|DUF35 domain-containing scaffold protein|Methanothermobacter

Query: 2 VKISGEGRV 10
+K SG+GR+
Sbjct: 49 LKFSGKGRI 57




419|Sequence|2091|2100|GEGRVKESIT

>sp|TIAS_METKA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanopyrus kandleri (strain

Query: 3 GRVKESI 9
GRVKES+
Sbjct: 119 GRVKESV 125


>sp|DNLI_METB6|DNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 GEGRVKESI 9
GEG V+E+I
Sbjct: 167 GEGTVREAI 175


>sp|Y1209_CALMQ|PROTEIN Cmaq_1209|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 GRVKESI 9
GRVKE+I
Sbjct: 236 GRVKEAI 242


>sp|HDRD_METBF|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina barkeri (strain

Query: 1 GEGRVKESI 9
GE RVK+++
Sbjct: 354 GESRVKDAL 362


>sp|SYR_METPE|ARGININE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 GEGRVKES 8
GEG V+ES
Sbjct: 525 GEGPVRES 532


>sp|IDI2_PYRNV|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 EGRVKESI 9
EGR+KE I
Sbjct: 303 EGRLKEEI 310




420|Sequence|2096|2105|KESITRTSRA

>sp|LYSJ_PYRAB|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 1 KESITRTSRA 10
KE+ITRT+ A
Sbjct: 156 KEAITRTTAA 165


>sp|PELO_METJA|PROTEIN pelota homolog|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ESITRTSRA 10
ESI+ TSRA
Sbjct: 226 ESISTTSRA 234




421|Sequence|2101|2110|RTSRAPSVAT

***** No hits found ******


422|Sequence|2106|2115|PSVATVGSIC

>sp|SYFB_METMP|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain DSM 14266

Query: 1 PSVATVGS 8
PSVAT GS
Sbjct: 354 PSVATTGS 361


>sp|SYFB_METM7|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C7 /

Query: 1 PSVATVGS 8
PSVAT GS
Sbjct: 354 PSVATTGS 361


>sp|SYFB_METM6|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C6 /

Query: 1 PSVATVGS 8
PSVAT GS
Sbjct: 354 PSVATTGS 361


>sp|SYFB_METM5|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C5 /

Query: 1 PSVATVGS 8
PSVAT GS
Sbjct: 354 PSVATTGS 361


>sp|SYFB_METVS|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus vannielii (strain ATCC 35089

Query: 1 PSVATVGS 8
PS+AT GS
Sbjct: 354 PSIATTGS 361


>sp|PURP_NITMS|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Nitrosopumilus maritimus (strain

Query: 2 SVATVGSIC 10
S+AT+GS C
Sbjct: 3 SIATLGSHC 11


>sp|TTH_ACIAM|TETRATHIONATE hydrolase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 PSVATVGSIC 10
PS+ TV +IC
Sbjct: 426 PSLGTVNAIC 435


>sp|AROA_HALWD|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PSVATVGSIC 10
P++AT+G+I
Sbjct: 315 PTIATLGAIA 324


>sp|MCH_METM7|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain C7 /

Query: 1 PSVATVGS 8
P++AT+GS
Sbjct: 87 PAIATLGS 94


>sp|MCH_METMP|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain DSM 14266

Query: 1 PSVATVGS 8
P++AT+GS
Sbjct: 87 PAIATLGS 94


>sp|MCH_META3|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PSVATVGS 8
P++AT+GS
Sbjct: 87 PAIATLGS 94




423|Sequence|2111|2120|VGSICDLNLK

>sp|PYRB_METAR|ASPARTATE carbamoyltransferase catalytic subunit|Methanocella arvoryzae

Query: 3 SICDLNL 9
+ICDLN+
Sbjct: 151 AICDLNV 157


>sp|COBQ_HALSA|PROBABLE cobyric acid synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 GSICDLNL 9
GSI +LNL
Sbjct: 151 GSIAELNL 158


>sp|COBQ_HALS3|PROBABLE cobyric acid synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 GSICDLNL 9
GSI +LNL
Sbjct: 151 GSIAELNL 158


>sp|TRM56_ARCFU|TRNA (cytidine(56)-2'-O)-methyltransferase|Archaeoglobus fulgidus

Query: 1 VGSICDLNL 9
V +CDLN+
Sbjct: 112 VYELCDLNI 120


>sp|Y1255_METJA|UNCHARACTERIZED glycosyltransferase MJ1255|Methanocaldococcus jannaschii (strain

Query: 3 SICDLNLK 10
+IC+ NLK
Sbjct: 163 TICEYNLK 170




424|Sequence|2116|2125|DLNLKIPEIN

>sp|TF2B_AERPE|TRANSCRIPTION initiation factor IIB|Aeropyrum pernix (strain ATCC 700893

Query: 1 DLNLKIP 7
DLN+KIP
Sbjct: 212 DLNIKIP 218


>sp|TYSY_METTH|PUTATIVE thymidylate synthase|Methanothermobacter thermautotrophicus

Query: 2 LNLKIPE 8
LN+K+PE
Sbjct: 65 LNIKVPE 71


>sp|F16PA_METB6|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Methanoregula boonei (strain DSM 21154

Query: 3 NLKIPE 8
NLKIPE
Sbjct: 172 NLKIPE 177


>sp|PSTB_METTH|PHOSPHATE import ATP-binding protein PstB|Methanothermobacter

Query: 1 DLNLKIPE 8
D+NLKIP+
Sbjct: 24 DINLKIPK 31


>sp|SEPS_METVS|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 DLNLKIPEI 9
D+NLKI EI
Sbjct: 502 DINLKIEEI 510


>sp|AATC_METTP|A-TYPE ATP synthase subunit C|Methanothrix thermoacetophila (strain DSM

Query: 2 LNLKIPEI 9
LN+ IPEI
Sbjct: 39 LNMDIPEI 46


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 3 NLKIPEIN 10
NLK+PE N
Sbjct: 1084 NLKLPEKN 1091


>sp|Y1572_METJA|PUTATIVE ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 DLNLKIPEIN 10
+LNL +PEI+
Sbjct: 235 ELNLDVPEIS 244


>sp|DNLI_METVS|DNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 DLNLKIPE 8
DLNLKI E
Sbjct: 82 DLNLKIKE 89


>sp|SEPS_METB6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoregula boonei (strain DSM 21154

Query: 1 DLNLKIPE 8
D+NLKI E
Sbjct: 514 DINLKIEE 521


>sp|PURP_SACS2|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Saccharolobus solfataricus (strain ATCC

Query: 3 NLKIPEI 9
N+KIPEI
Sbjct: 114 NIKIPEI 120


>sp|SEPS_METLZ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 DLNLKIPE 8
D+NLKI E
Sbjct: 491 DVNLKIEE 498


>sp|EF1A_METBF|ELONGATION factor 1-alpha|Methanosarcina barkeri (strain Fusaro /

Query: 3 NLKIPE 8
NLK+PE
Sbjct: 213 NLKVPE 218


>sp|COOS_METKA|CARBON monoxide dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 DLNLKIPEI 9
+LN +IPEI
Sbjct: 24 ELNEEIPEI 32


>sp|TF2B_CALMQ|TRANSCRIPTION initiation factor IIB|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 DLNLKIP 7
+LN+KIP
Sbjct: 328 ELNIKIP 334


>sp|GATE_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Archaeoglobus fulgidus (strain ATCC

Query: 2 LNLKIPEI 9
LN++IPE+
Sbjct: 437 LNVEIPEL 444


>sp|TRUD_PICTO|PROBABLE tRNA pseudouridine synthase D|Picrophilus torridus (strain ATCC

Query: 2 LNLKIPEIN 10
+NLK PE N
Sbjct: 385 INLKFPEKN 393


>sp|DNAJ_THEVO|CHAPERONE protein DnaJ|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LNLKIPE 8
NLKIPE
Sbjct: 298 YNLKIPE 304


>sp|PCNA_METVS|DNA polymerase sliding clamp|Methanococcus vannielii (strain ATCC 35089

Query: 3 NLKIPEIN 10
NLK+P+I+
Sbjct: 120 NLKVPDIS 127


>sp|Y343_METJA|UNCHARACTERIZED protein MJ0343|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NLKIPEIN 10
NLK+PE++
Sbjct: 477 NLKLPELS 484


>sp|PCNA_META3|DNA polymerase sliding clamp|Methanococcus aeolicus (strain ATCC

Query: 3 NLKIPEI 9
N+K+PEI
Sbjct: 120 NVKVPEI 126


>sp|UPP_SULTO|URACIL phosphoribosyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 KIPEIN 10
KIPEIN
Sbjct: 126 KIPEIN 131


>sp|Y3016_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 3 NLKIPE 8
NLKIPE
Sbjct: 419 NLKIPE 424


>sp|PCNA_METMP|DNA polymerase sliding clamp|Methanococcus maripaludis (strain DSM

Query: 3 NLKIPEI 9
NLK+P+I
Sbjct: 120 NLKVPDI 126


>sp|APGM_SACI1|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 DLNLKIPEIN 10
+LN KI EIN
Sbjct: 128 ELNEKIKEIN 137


>sp|XYLG_SULAC|XYLOSE/ARABINOSE import ATP-binding protein XylG|Sulfolobus acidocaldarius (strain

Query: 2 LNLKIPEIN 10
L ++IP+IN
Sbjct: 128 LQIRIPDIN 136


>sp|APGM_SACI6|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 DLNLKIPEIN 10
+LN KI EIN
Sbjct: 128 ELNEKIKEIN 137


>sp|APGM_SACI4|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 DLNLKIPEIN 10
+LN KI EIN
Sbjct: 128 ELNEKIKEIN 137


>sp|APGM_SACI3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.16.27)

Query: 1 DLNLKIPEIN 10
+LN KI EIN
Sbjct: 128 ELNEKIKEIN 137


>sp|PCNA_METM7|DNA polymerase sliding clamp|Methanococcus maripaludis (strain C7 /

Query: 3 NLKIPEI 9
NLK+P+I
Sbjct: 120 NLKVPDI 126


>sp|PCNA_METM5|DNA polymerase sliding clamp|Methanococcus maripaludis (strain C5 /

Query: 3 NLKIPEI 9
NLK+P+I
Sbjct: 120 NLKVPDI 126


>sp|APGM_SACI7|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 DLNLKIPEIN 10
+LN KI EIN
Sbjct: 128 ELNEKIKEIN 137


>sp|APGM_SACI2|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 DLNLKIPEIN 10
+LN KI EIN
Sbjct: 128 ELNEKIKEIN 137


>sp|PCNA_METM6|DNA polymerase sliding clamp|Methanococcus maripaludis (strain C6 /

Query: 3 NLKIPEI 9
NLK+P+I
Sbjct: 120 NLKVPDI 126


>sp|DPOL3_SACSH|DNA polymerase 3|Saccharolobus shibatae (strain ATCC 51178

Query: 1 DLNLKIPEI 9
DLNLK+ +I
Sbjct: 566 DLNLKVRKI 574


>sp|APGM_SACS2|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus solfataricus (strain ATCC

Query: 1 DLNLKIPEIN 10
+LN KI EIN
Sbjct: 128 ELNEKIKEIN 137




425|Sequence|2121|2130|IPEINSSDMS

>sp|KAD_ARCFU|ADENYLATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IPEINSSDM 9
IP+I++ DM
Sbjct: 26 IPQISTGDM 34


>sp|SYD_PYRHO|ASPARTATE--TRNA(ASP) ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IPEINSSDM 9
IP++NS D+
Sbjct: 63 IPKLNSEDV 71


>sp|IDI2_AERPE|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Aeropyrum pernix (strain ATCC 700893

Query: 2 PEINSSDMS 10
PE+N D+S
Sbjct: 40 PEVNLGDVS 48


>sp|SYD_PYRFU|ASPARTATE--TRNA(ASP) ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IPEINSSDM 9
IP++NS D+
Sbjct: 63 IPKLNSEDV 71


>sp|SYD_PYRAB|ASPARTATE--TRNA(ASP) ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 IPEINSSDM 9
IP++NS D+
Sbjct: 63 IPKLNSEDV 71


>sp|LONB_THEAC|ARCHAEAL Lon protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IPEINSSDM 9
+PE+N SD+
Sbjct: 582 VPELNYSDI 590


>sp|PCNA_PICTO|DNA polymerase sliding clamp|Picrophilus torridus (strain ATCC 700027

Query: 1 IPEINSSD 8
+P+INS D
Sbjct: 120 VPQINSDD 127


>sp|IDI2_METTP|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 IPEINSSDM 9
+PEI+ SD+
Sbjct: 36 LPEIDESDV 44


>sp|Y920_METJA|UNCHARACTERIZED protein MJ0920|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EINSSDM 9
EIN SDM
Sbjct: 95 EINDSDM 101




426|Sequence|2126|2135|SSDMSAHVTS

>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 DMSAHVTS 10
DMS HV+S
Sbjct: 227 DMSTHVSS 234


>sp|COSB_HALS3|CHEMOTACTIC signal transduction system substrate-binding|Halobacterium

Query: 2 SDMSAHVTS 10
SD++AHV S
Sbjct: 176 SDLAAHVNS 184




427|Sequence|2131|2140|AHVTSPSGRV

>sp|SYTC_AERPE|THREONINE--TRNA ligase catalytic subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 AHVTSPSGRV 10
AH+ P GRV
Sbjct: 165 AHIIVPGGRV 174


>sp|TRF2_THEVO|TRICORN protease-interacting factor F2|Thermoplasma volcanium (strain ATCC

Query: 3 VTSPSGR 9
VT+PSGR
Sbjct: 701 VTNPSGR 707


>sp|COPZ_ARCFU|COPPER chaperone CopZ|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VTSPSGR 9
VT+PSGR
Sbjct: 111 VTNPSGR 117


>sp|APE2_SULTO|PROBABLE aminopeptidase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 AHVTSP 6
AHVTSP
Sbjct: 341 AHVTSP 346


>sp|DPCKG_METLZ|GTP-DEPENDENT dephospho-CoA kinase|Methanocorpusculum labreanum (strain ATCC

Query: 2 HVTSPSGRV 10
HVT+P+G +
Sbjct: 79 HVTNPAGTI 87


>sp|MVHB_METFE|POLYFERREDOXIN protein MvhB|Methanothermus fervidus

Query: 3 VTSPSGRV 10
V SP GRV
Sbjct: 301 VVSPKGRV 308


>sp|SYR_PYRFU|ARGININE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 HVTSPSGR 9
HV SP G+
Sbjct: 417 HVESPEGK 424


>sp|RAD50_PYRFU|DNA double-strand break repair Rad50|Pyrococcus furiosus (strain ATCC

Query: 2 HVTSPSGR 9
HVT PS +
Sbjct: 110 HVTEPSSK 117


>sp|MAP2_METTH|METHIONINE aminopeptidase|Methanothermobacter thermautotrophicus (strain

Query: 1 AHVTSPSG 8
AH TSP G
Sbjct: 63 AHYTSPPG 70


>sp|RS11_THEAC|SMALL ribosomal subunit protein uS11|Thermoplasma acidophilum (strain

Query: 2 HVTSPSG 8
HVT P+G
Sbjct: 22 HVTDPTG 28


>sp|RS11_THEVO|SMALL ribosomal subunit protein uS11|Thermoplasma volcanium (strain

Query: 2 HVTSPSG 8
HVT P+G
Sbjct: 24 HVTDPTG 30


>sp|LYSZ_NITMS|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Nitrosopumilus

Query: 3 VTSPSG 8
VTSPSG
Sbjct: 55 VTSPSG 60




428|Sequence|2136|2145|PSGRVTEAEI

>sp|COXX2_CENSY|PROTOHEME IX farnesyltransferase 2|Cenarchaeum symbiosum (strain A)

Query: 1 PSGRVTEA 8
PSGRVT A
Sbjct: 87 PSGRVTPA 94


>sp|TFE_METBF|TRANSCRIPTION factor E|Methanosarcina barkeri (strain Fusaro /

Query: 1 PSGRVTEAEI 10
P G VT+ EI
Sbjct: 29 PEGEVTDEEI 38


>sp|TFE_METAC|TRANSCRIPTION factor E|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PSGRVTEAEI 10
P G VT+ EI
Sbjct: 32 PEGEVTDEEI 41


>sp|ASD_METKA|PUTATIVE archaetidylserine decarboxylase proenzyme|Methanopyrus kandleri

Query: 3 GRVTEAEI 10
GRV EAEI
Sbjct: 107 GRVVEAEI 114


>sp|TFE_METMA|TRANSCRIPTION factor E|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PSGRVTEAEI 10
P G VT+ EI
Sbjct: 29 PEGNVTDEEI 38


>sp|PGK_HALSA|PHOSPHOGLYCERATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 2 SGRVTEAEI 10
+GRV EAE+
Sbjct: 173 AGRVMEAEL 181


>sp|PGK_HALS3|PHOSPHOGLYCERATE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 2 SGRVTEAEI 10
+GRV EAE+
Sbjct: 173 AGRVMEAEL 181


>sp|TDXH_STAMF|PEROXIREDOXIN marinus (strain ATCC 43588

Query: 1 PSGRVTEAE 9
P+G V EAE
Sbjct: 187 PAGTVKEAE 195


>sp|RFCL_METKA|REPLICATION factor C large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 PSGRVTEAEI 10
P+GRVT ++
Sbjct: 225 PTGRVTSDDV 234


>sp|HDRC1_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit C1|Methanococcus

Query: 1 PSGRVT 6
PSGR+T
Sbjct: 45 PSGRIT 50


>sp|HDRC1_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 1 PSGRVT 6
PSGR+T
Sbjct: 46 PSGRIT 51


>sp|Y1287_METMA|UPF0313 protein MM_1287|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 SGRVTEA 8
SGRVT+A
Sbjct: 475 SGRVTDA 481


>sp|Y596_METJA|UNCHARACTERIZED protein MJ0596|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GRVTEAEI 10
GR+TE EI
Sbjct: 70 GRITEEEI 77


>sp|GGR_METLZ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 PSGRVTE 7
P+G+VTE
Sbjct: 249 PNGKVTE 255




429|Sequence|2141|2150|TEAEIVPMGK

>sp|GIN23_SACS2|DNA replication complex GINS protein|Saccharolobus solfataricus

Query: 1 TEAEIVPMGK 10
T A +VP+GK
Sbjct: 84 TPASLVPLGK 93


>sp|GPI_THEKO|GLUCOSE-6-PHOSPHATE isomerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 EAEIVPMG 9
EAE +PMG
Sbjct: 116 EAEWIPMG 123


>sp|PDAD_METJA|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 EAEIVPMGK 10
EAEIVP+ K
Sbjct: 58 EAEIVPLPK 66


>sp|Y1520_METJA|UNCHARACTERIZED protein MJ1520|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 IVPMGK 10
I+PMGK
Sbjct: 200 IIPMGK 205


>sp|Y1052_METJA|UPF0045 thiamine-binding protein family member|Methanocaldococcus

Query: 2 EAEIVPMGK 10
E I+P+GK
Sbjct: 10 EVSIIPLGK 18


>sp|NCPP_PYRAR|PROBABLE inosine/xanthosine triphosphatase|Pyrobaculum arsenaticum (strain

Query: 3 AEIVPMGK 10
AE+VP+G+
Sbjct: 27 AEVVPVGR 34


>sp|TRPF_PYRAR|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 AEIVPMGK 10
AE+ P+GK
Sbjct: 150 AEVAPLGK 157


>sp|TRUD_METKA|PROBABLE tRNA pseudouridine synthase D|Methanopyrus kandleri (strain AV19 /

Query: 2 EAEIVPMGK 10
+ +IVPMG+
Sbjct: 115 DLKIVPMGR 123




430|Sequence|2146|2155|VPMGKNSHCV

>sp|FWDD_METJA|PROTEIN FwdD|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VPMGKNSHCV 10
+PMG ++CV
Sbjct: 78 IPMGPWANCV 87


>sp|KAE1_METKA|TRNA N6-adenosine threonylcarbamoyltransferase|Methanopyrus kandleri

Query: 1 VPMGKNSHCV 10
VP+ +HCV
Sbjct: 102 VPLAPVNHCV 111


>sp|TRUB_ARCFU|PROBABLE tRNA pseudouridine synthase B|Archaeoglobus fulgidus (strain ATCC

Query: 2 PMGKNSHCV 10
PMG +SH V
Sbjct: 41 PMGPSSHEV 49


>sp|SUDHB_PYRFU|SULFIDE dehydrogenase subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PMGKNSH 8
P+GK SH
Sbjct: 88 PLGKPSH 94


>sp|NADA_PYRAB|QUINOLINATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 VPMGKNSHC 9
+P+ N HC
Sbjct: 162 IPVPPNGHC 170


>sp|NADA_THEKO|QUINOLINATE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VPMGKNSHC 9
+P+ N HC
Sbjct: 165 IPVPPNGHC 173


>sp|KAD6_PYRAE|PUTATIVE adenylate kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 MGKNSHC 9
+GK +HC
Sbjct: 17 VGKTTHC 23




431|Sequence|2151|2160|NSHCVRFVPQ

>sp|GLNB4_METBA|NITROGEN fixation nifHD2 region GlnB-like|Methanosarcina barkeri

Query: 4 CVRFVPQ 10
C+RF+P+
Sbjct: 60 CIRFIPK 66


>sp|MSMS_METAC|METHYL sulfide methyltransferase-associated sensor|Methanosarcina

Query: 3 HCVRFVPQ 10
H ++F PQ
Sbjct: 903 HAIKFTPQ 910


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 HCVRFVP 9
HC +F+P
Sbjct: 130 HCQKFLP 136


>sp|CPGS_PYRFU|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus furiosus (strain ATCC

Query: 3 HCVRFVPQ 10
H RFVP+
Sbjct: 310 HLTRFVPR 317


>sp|NIFH2_METBA|NITROGENASE iron protein 2|Methanosarcina barkeri

Query: 2 SHCVRFVPQ 10
SH + F+P+
Sbjct: 202 SHLIHFIPR 210


>sp|Y1071_METJA|UNCHARACTERIZED protein MJ1071|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CVRFVPQ 10
C+ FVP+
Sbjct: 113 CINFVPK 119


>sp|P538_METTH|PROTEIN MTH_538|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 NSHCVR 6
N HC+R
Sbjct: 96 NPHCIR 101




432|Sequence|2156|2165|RFVPQEMGVH

>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 2 FVPQEMGV 9
F+P+E+GV
Sbjct: 746 FIPREVGV 753


>sp|TRM56_HALSA|TRNA (cytidine(56)-2'-O)-methyltransferase|Halobacterium salinarum

Query: 1 RFVPQEMGVH 10
R +P+E+G H
Sbjct: 164 RVIPEELGKH 173


>sp|TRM56_HALS3|TRNA (cytidine(56)-2'-O)-methyltransferase|Halobacterium salinarum

Query: 1 RFVPQEMGVH 10
R +P+E+G H
Sbjct: 164 RVIPEELGKH 173


>sp|KAE1_IGNH4|TRNA N6-adenosine threonylcarbamoyltransferase|Ignicoccus hospitalis

Query: 2 FVPQEMGVH 10
+VP+E G+H
Sbjct: 32 YVPKEGGIH 40


>sp|KAE1_STAMF|TRNA N6-adenosine threonylcarbamoyltransferase|Staphylothermus marinus

Query: 1 RFVPQEMGVH 10
+++P++ G+H
Sbjct: 33 KYIPEKGGIH 42


>sp|DHAS_METTH|ASPARTATE-SEMIALDEHYDE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 RFVPQEMGVH 10
R +PQ++G+H
Sbjct: 265 RGLPQKLGLH 274


>sp|KAE1_ARCFU|TRNA N6-adenosine threonylcarbamoyltransferase|Archaeoglobus fulgidus

Query: 2 FVPQEMGVH 10
++P+E G+H
Sbjct: 31 YIPKEGGIH 39


>sp|YB50_METTW|IRON-SULFUR cluster assembly SufBD family|Methanothermobacter

Query: 1 RFVPQEMGVH 10
RF+ +E G H
Sbjct: 27 RFIKEEAGEH 36


>sp|KAE1B_PICTO|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 FVPQEMGVH 10
+VP+ G+H
Sbjct: 31 YVPEHGGIH 39


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 2 FVPQEMGV 9
F+P+E+G+
Sbjct: 762 FIPREIGL 769


>sp|SRP19_AERPE|SIGNAL recognition particle 19 kDa|Aeropyrum pernix (strain ATCC 700893

Query: 1 RFVPQEMGV 9
R VP++MGV
Sbjct: 35 RRVPRDMGV 43


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 2 FVPQEMGV 9
F P+E+GV
Sbjct: 722 FTPREVGV 729


>sp|KAE1B_NATPD|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 FVPQEMGVH 10
+VP+ G+H
Sbjct: 33 YVPESGGIH 41


>sp|FLPA_PYRNV|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrobaculum neutrophilum (strain

Query: 1 RFVPQEMGVH 10
+FVP + G H
Sbjct: 72 KFVPIQEGTH 81




433|Sequence|2161|2170|EMGVHTVSVK

>sp|UPPS_PICTO|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Picrophilus

Query: 1 EMGVHTVSV 9
E+G+H V+V
Sbjct: 67 EVGIHMVTV 75


>sp|ILVE_METTH|PUTATIVE branched-chain-amino-acid aminotransferase|Methanothermobacter

Query: 1 EMGVHTVS 8
EMGVH V+
Sbjct: 107 EMGVHPVN 114




434|Sequence|2166|2175|TVSVKYRGQH

>sp|GLKA_PYRAB|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus abyssi (strain GE5 /

Query: 5 KYRGQH 10
KYRG+H
Sbjct: 349 KYRGEH 354


>sp|TRMY_METAR|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanocella arvoryzae

Query: 2 VSVKYRGQH 10
V++K+ G+H
Sbjct: 64 VTIKFSGEH 72


>sp|HMGCS_METTL|HYDROXYMETHYLGLUTARYL-COA synthase|Methanothermococcus thermolithotrophicus

Query: 2 VSVKYRGQ 9
V VKYRG+
Sbjct: 339 VYVKYRGK 346


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 1 TVSVKYRGQH 10
T+ ++YRG++
Sbjct: 783 TLEIRYRGRN 792




435|Sequence|2171|2180|YRGQHVTGSP

>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 GQHVTGSP 10
G H+TGSP
Sbjct: 79 GWHITGSP 86


>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GQHVTGSP 10
G HVTG+P
Sbjct: 77 GYHVTGTP 84


>sp|MTXA_METAC|PUTATIVE methyltransferase Mtx subunit A|Methanosarcina acetivorans

Query: 2 RGQHVTGSP 10
RG +VTG P
Sbjct: 12 RGDYVTGKP 20


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 GQHVTGSP 10
G HVTG+P
Sbjct: 84 GFHVTGTP 91


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 GQHVTGSP 10
G HVTG+P
Sbjct: 87 GFHVTGTP 94


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 GQHVTGSP 10
G HVTG+P
Sbjct: 87 GFHVTGTP 94


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 GQHVTGSP 10
G HVTG+P
Sbjct: 87 GFHVTGTP 94


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 GQHVTGSP 10
G HVTG+P
Sbjct: 77 GFHVTGTP 84


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 GQHVTGSP 10
G HVTG+P
Sbjct: 77 GFHVTGTP 84


>sp|SYL_ARCFU|LEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GQHVTGSP 10
G HVTG+P
Sbjct: 74 GFHVTGTP 81


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GQHVTGSP 10
G HVTG+P
Sbjct: 77 GFHVTGTP 84


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 GQHVTGSP 10
G HVTG+P
Sbjct: 77 GFHVTGTP 84


>sp|SYL_THEKO|LEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 GQHVTGSP 10
G H+TG+P
Sbjct: 79 GWHITGAP 86


>sp|SYL_PYRHO|LEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 HVTGSP 10
H+TGSP
Sbjct: 81 HITGSP 86


>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 HVTGSP 10
H+TGSP
Sbjct: 81 HITGSP 86


>sp|GLKA_PYRAB|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 YRGQHV 6
YRG+HV
Sbjct: 350 YRGEHV 355


>sp|LEUD_SULTO|3-ISOPROPYLMALATE dehydratase small subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YRGQHVTGSP 10
Y+G+ +TG P
Sbjct: 135 YKGRGITGMP 144


>sp|PGK_ARCFU|PHOSPHOGLYCERATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YRGQHV 6
YRG+HV
Sbjct: 14 YRGKHV 19


>sp|SYL_METKA|LEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 5 HVTGSP 10
HVTG+P
Sbjct: 74 HVTGTP 79


>sp|SYL_METTH|LEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 HVTGSP 10
HVTG+P
Sbjct: 72 HVTGAP 77


>sp|WTPC_PYRHO|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Pyrococcus horikoshii (strain

Query: 2 RGQHVTGSP 10
RG+ +TG P
Sbjct: 60 RGEDITGLP 68


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 GQHVTGSP 10
G HV+G+P
Sbjct: 82 GFHVSGTP 89


>sp|PRIL_METAR|DNA primase large subunit PriL|Methanocella arvoryzae (strain DSM 22066

Query: 1 YRGQHVTG 8
Y+ QH+TG
Sbjct: 280 YQVQHITG 287


>sp|CBIA_METVS|COBYRINATE a,c-diamide synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 YRGQHVTGSP 10
Y QH G+P
Sbjct: 429 YAHQHAVGNP 438


>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 5 HVTGSP 10
H+TG+P
Sbjct: 83 HITGTP 88


>sp|SYL_THEON|LEUCINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 5 HVTGSP 10
H+TG+P
Sbjct: 81 HITGAP 86


>sp|SYL_NANEQ|LEUCINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 GQHVTGSP 10
G H TG+P
Sbjct: 47 GFHATGAP 54


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 YRGQHVTGS 9
Y+G+ V+GS
Sbjct: 7528 YKGESVSGS 7536


>sp|NIFK_METBA|NITROGENASE molybdenum-iron protein beta chain|Methanosarcina barkeri

Query: 1 YRGQHVTG 8
Y G H+TG
Sbjct: 142 YVGSHITG 149


>sp|SYL_AERPE|LEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 RGQHVTGSP 10
+G H TG P
Sbjct: 74 QGWHATGGP 82


>sp|RLMN_NITMS|RIBOSOMAL RNA large subunit methyltransferase|Nitrosopumilus maritimus

Query: 2 RGQHVT 7
RG+HVT
Sbjct: 156 RGEHVT 161


>sp|METAA_METII|HOMOSERINE O-acetyltransferase|Methanomassiliicoccus intestinalis (strain

Query: 1 YRGQHVTGSP 10
Y G +TG+P
Sbjct: 100 YDGMIITGAP 109


>sp|NQOR_METMA|NAD(P)H dehydrogenase (quinone)|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YRGQHVT 7
Y+G+HVT
Sbjct: 194 YQGRHVT 200


>sp|NQOR_METAC|NAD(P)H dehydrogenase (quinone)|Methanosarcina acetivorans (strain ATCC

Query: 1 YRGQHVT 7
Y+G+HVT
Sbjct: 194 YQGRHVT 200




436|Sequence|2176|2185|VTGSPFQFTV

>sp|Y1631_METJA|UNCHARACTERIZED protein MJ1631|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GSPFQFTV 10
G+PF +TV
Sbjct: 228 GNPFNYTV 235


>sp|TF2B1_THEVO|TRANSCRIPTION initiation factor IIB 1|Thermoplasma volcanium (strain ATCC 51530

Query: 3 GSPFQFTV 10
GSP FT+
Sbjct: 68 GSPMTFTI 75


>sp|LEU3_METJA|3-ISOPROPYLMALATE/3-METHYLMALATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TGSPFQF 8
TG PF+F
Sbjct: 27 TGLPFEF 33


>sp|SLAA_SACS2|S-LAYER protein A|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 TGSPFQFTV 10
T SPF FT+
Sbjct: 257 TTSPFNFTL 265




437|Sequence|2181|2190|FQFTVGPLGE

>sp|PUR5_PYRFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FQFTVGPLGE 10
F+F G LGE
Sbjct: 29 FEFRKGKLGE 38




438|Sequence|2186|2195|GPLGEGGAHK

>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 GEGGAHK 10
GEGGAH+
Sbjct: 985 GEGGAHE 991


>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 GEGGAHK 10
GEGGAH+
Sbjct: 1002 GEGGAHE 1008


>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 4 GEGGAHK 10
GEGGAH+
Sbjct: 1066 GEGGAHE 1072


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 PLGEGGAHK 10
P GE GAH+
Sbjct: 1485 PWGEEGAHE 1493


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 4 GEGGAHK 10
GEGGAH+
Sbjct: 978 GEGGAHE 984


>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 GEGGAHK 10
G+GGAH+
Sbjct: 1003 GDGGAHE 1009


>sp|GLCDH_SACSO|GLUCOSE 1-dehydrogenase|Saccharolobus solfataricus (Sulfolobus

Query: 1 GPLGEGGAHK 10
G GE G HK
Sbjct: 110 GEFGEAGIHK 119


>sp|GLCD1_SACS2|GLUCOSE 1-dehydrogenase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GPLGEGGAHK 10
G GE G HK
Sbjct: 110 GEFGEAGIHK 119


>sp|RECJ1_METJA|EXONUCLEASE RecJ1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GEGGAHK 10
G GG HK
Sbjct: 440 GSGGGHK 446


>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GEGGAHK 10
GE GAH+
Sbjct: 839 GESGAHE 845




439|Sequence|2191|2200|GGAHKVRAGG

>sp|RL1_STAMF|LARGE ribosomal subunit protein uL1|Staphylothermus marinus (strain

Query: 1 GGAHKV 6
GGAH+V
Sbjct: 78 GGAHRV 83


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 4 HKVRAGG 10
HKV+ GG
Sbjct: 537 HKVKEGG 543


>sp|SYA_KORCO|ALANINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 GGAHKVRAG 9
GG H +R G
Sbjct: 691 GGTHVLRTG 699




440|Sequence|2196|2205|VRAGGPGLER

>sp|GUAAA_METTH|GMP synthase [glutamine-hydrolyzing] subunit A|Methanothermobacter

Query: 1 VRAGGPGLER 10
+ GGP LER
Sbjct: 49 ILGGGPSLER 58


>sp|GUAAA_METBU|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcoides

Query: 1 VRAGGPGLER 10
+ +GGP +ER
Sbjct: 51 ILSGGPSMER 60


>sp|PRIS_HALLT|DNA primase small subunit PriS|Halorubrum lacusprofundi (strain ATCC

Query: 1 VRAGGPGLER 10
V AGGPG+ R
Sbjct: 262 VEAGGPGVRR 271


>sp|HELS_METVS|ATP-DEPENDENT DNA helicase Hel308|Methanococcus vannielii (strain ATCC 35089

Query: 2 RAGGPGLE 9
RAG PGL+
Sbjct: 381 RAGRPGLD 388


>sp|HELS_METJA|ATP-DEPENDENT DNA helicase Hel308|Methanocaldococcus jannaschii (strain ATCC

Query: 2 RAGGPGLE 9
RAG PGL+
Sbjct: 876 RAGRPGLD 883


>sp|GUAAA_METST|GMP synthase [glutamine-hydrolyzing] subunit A|Methanosphaera

Query: 1 VRAGGPGLER 10
+ GGP +ER
Sbjct: 48 ILGGGPSIER 57


>sp|RF1_METVS|PEPTIDE chain release factor subunit|Methanococcus vannielii (strain ATCC

Query: 4 GGPGLER 10
GGPG E+
Sbjct: 98 GGPGTEK 104


>sp|RF1_METMP|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain DSM

Query: 4 GGPGLER 10
GGPG E+
Sbjct: 98 GGPGTEK 104


>sp|RF1_METM7|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C7 /

Query: 4 GGPGLER 10
GGPG E+
Sbjct: 98 GGPGTEK 104


>sp|RF1_METM6|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C6 /

Query: 4 GGPGLER 10
GGPG E+
Sbjct: 98 GGPGTEK 104


>sp|RF1_METM5|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C5 /

Query: 4 GGPGLER 10
GGPG E+
Sbjct: 98 GGPGTEK 104


>sp|HELS_CALMQ|ATP-DEPENDENT DNA helicase Hel308|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 RAGGPGLE 9
RAG PGL+
Sbjct: 382 RAGRPGLD 389


>sp|GUAAA_METAR|GMP synthase [glutamine-hydrolyzing] subunit A|Methanocella arvoryzae

Query: 1 VRAGGPGLER 10
V +GGP +ER
Sbjct: 51 VFSGGPTMER 60


>sp|RF1_METST|PEPTIDE chain release factor subunit|Methanosphaera stadtmanae (strain ATCC

Query: 4 GGPGLER 10
GGPG E+
Sbjct: 98 GGPGTEK 104


>sp|TRPB1_PYRFU|TRYPTOPHAN synthase beta chain 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VRAGGPGLE 9
V AGG GLE
Sbjct: 250 VEAGGKGLE 258


>sp|RF1_METS3|PEPTIDE chain release factor subunit|Methanobrevibacter smithii (strain

Query: 4 GGPGLER 10
GGPG E+
Sbjct: 98 GGPGTEK 104


>sp|ARSR_HALSA|PUTATIVE arsenical resistance operon repressor|Halobacterium salinarum

Query: 3 AGGPGLE 9
AGGP LE
Sbjct: 37 AGGPALE 43


>sp|TRPB1_THEKO|TRYPTOPHAN synthase beta chain 1|Thermococcus kodakarensis (strain ATCC

Query: 1 VRAGGPGLE 9
V AGG GLE
Sbjct: 252 VEAGGKGLE 260


>sp|GUAAA_METMJ|GMP synthase [glutamine-hydrolyzing] subunit A|Methanoculleus

Query: 1 VRAGGPGLER 10
V GGP LER
Sbjct: 48 VLGGGPTLER 57


>sp|GUAAA_METMA|GMP synthase [glutamine-hydrolyzing] subunit A|Methanosarcina mazei

Query: 1 VRAGGPGLER 10
+ +GGP +ER
Sbjct: 51 ILSGGPEMER 60


>sp|GUAAA_ARCFU|GMP synthase [glutamine-hydrolyzing] subunit A|Archaeoglobus fulgidus

Query: 1 VRAGGPGLER 10
V GGP L+R
Sbjct: 46 VIGGGPSLDR 55


>sp|GUAAA_METAC|GMP synthase [glutamine-hydrolyzing] subunit A|Methanosarcina

Query: 1 VRAGGPGLER 10
+ +GGP +ER
Sbjct: 51 ILSGGPEMER 60


>sp|RF1_METTH|PEPTIDE chain release factor subunit|Methanothermobacter thermautotrophicus

Query: 1 VRAGGPGLER 10
V GGPG E+
Sbjct: 95 VPRGGPGTEK 104


>sp|DNAG_IGNH4|DNA primase DnaG|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 GGPGLER 10
GPG+ER
Sbjct: 157 AGPGVER 163


>sp|Y1861_SACS2|UPF0273 protein SSO1861|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 GGPGLE 9
GGPG+E
Sbjct: 179 GGPGVE 184


>sp|HELS_HALMA|ATP-DEPENDENT DNA helicase Hel308|Haloarcula marismortui (strain ATCC 43049

Query: 2 RAGGPGLE 9
RAG PGL+
Sbjct: 382 RAGRPGLD 389


>sp|AROC_PYRAR|CHORISMATE synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 VRAGGPGLE 9
V+ G PGLE
Sbjct: 267 VKGGKPGLE 275


>sp|Y1830_SULTO|UPF0273 protein STK_18300|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 GGPGLE 9
GGPG+E
Sbjct: 182 GGPGVE 187


>sp|HELS_PYRCJ|ATP-DEPENDENT DNA helicase Hel308|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 RAGGPGLE 9
RAG PGL+
Sbjct: 376 RAGRPGLD 383


>sp|HELS_AERPE|ATP-DEPENDENT DNA helicase Hel308|Aeropyrum pernix (strain ATCC 700893

Query: 2 RAGGPGLE 9
RAG PGL+
Sbjct: 379 RAGRPGLD 386




441|Sequence|2201|2210|PGLERGEAGV

>sp|Y3143_PYRAE|UPF0273 protein PAE3143|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GLERGEAGV 10
GL+RG+AGV
Sbjct: 48 GLKRGDAGV 56


>sp|HTR6_HALS3|TRANSDUCER protein Htr6|Halobacterium salinarum (strain ATCC 29341

Query: 2 GLERGEAG 9
+ERGEAG
Sbjct: 541 AVERGEAG 548


>sp|MPGP_PYRFU|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PGLERGE 7
PG++RGE
Sbjct: 80 PGVKRGE 86


>sp|DHQS_METMJ|3-DEHYDROQUINATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 LERGEAGV 10
LERG AG+
Sbjct: 118 LERGTAGI 125


>sp|SELD_METKA|SELENIDE, water dikinase|Methanopyrus kandleri (strain AV19 /

Query: 2 GLERGEAG 9
GLERGE+
Sbjct: 273 GLERGESA 280


>sp|Y2966_METMA|UPF0282 protein MM_2966|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 ERGEAGV 10
E+GEAGV
Sbjct: 292 EKGEAGV 298


>sp|Y476_AERPE|UPF0215 protein APE_0476.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 PGLERGEAGV 10
P LER E+G+
Sbjct: 99 PSLERLESGL 108


>sp|Y039_METKA|UPF0273 protein MK0039|Methanopyrus kandleri (strain AV19 /

Query: 2 GLERGEAGV 10
GLE GE GV
Sbjct: 48 GLEEGEPGV 56




442|Sequence|2206|2215|GEAGVPAEFS

>sp|ARLY_METHJ|ARGININOSUCCINATE lyase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 EAGVPAE 8
E+GVPAE
Sbjct: 70 ESGVPAE 76


>sp|TRUD_NATPD|PROBABLE tRNA pseudouridine synthase D|Natronomonas pharaonis (strain ATCC

Query: 1 GEAGVPAEF 9
GEAGVP F
Sbjct: 167 GEAGVPNYF 175


>sp|PUR7_METTH|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 EAGVPAEF 9
EAGVP ++
Sbjct: 65 EAGVPTQY 72


>sp|IF2A_STAMF|TRANSLATION initiation factor 2 subunit|Staphylothermus marinus (strain ATCC

Query: 2 EAGVPAEF 9
EAG+P E+
Sbjct: 153 EAGIPEEW 160


>sp|GSA_ARCFU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 AGVPAEF 9
AGVPA+F
Sbjct: 165 AGVPADF 171


>sp|GSA_IGNH4|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GEAGVPAEFS 10
G AGVP E S
Sbjct: 162 GSAGVPEEVS 171


>sp|G3P_METM5|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 2 EAGVPAE 8
EAG+P E
Sbjct: 63 EAGIPVE 69


>sp|KTHY_PYRCJ|PROBABLE thymidylate kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GEAGVPAEF 9
G AGVP E+
Sbjct: 97 GAAGVPIEY 105


>sp|IF2P_AERPE|PROBABLE translation initiation factor IF-2|Aeropyrum pernix (strain ATCC

Query: 2 EAGVPAEF 9
EAG+PAE
Sbjct: 185 EAGLPAEL 192


>sp|IF2A_HYPBU|TRANSLATION initiation factor 2 subunit|Hyperthermus butylicus (strain DSM 5456

Query: 2 EAGVPAEF 9
EAGVP E+
Sbjct: 153 EAGVPEEW 160


>sp|G3P_METM7|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 2 EAGVPAE 8
EAG+P E
Sbjct: 63 EAGIPVE 69


>sp|G3P_METM6|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus maripaludis (strain C6 /

Query: 2 EAGVPAE 8
EAG+P E
Sbjct: 63 EAGIPVE 69


>sp|G3P_METMP|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 2 EAGVPAE 8
EAG+P E
Sbjct: 63 EAGIPVE 69


>sp|GUAAA_METM5|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus

Query: 4 GVPAEFS 10
GVP+EF+
Sbjct: 114 GVPSEFT 120


>sp|ILVD_METST|DIHYDROXY-ACID dehydratase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 EAGVPAEF 9
E GVP EF
Sbjct: 64 EGGVPFEF 71


>sp|RS4E_HALLT|SMALL ribosomal subunit protein eS4|Halorubrum lacusprofundi (strain

Query: 1 GEAGVP 6
GEAGVP
Sbjct: 33 GEAGVP 38


>sp|GUAAA_METM7|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus

Query: 4 GVPAEFS 10
GVP+EF+
Sbjct: 114 GVPSEFT 120


>sp|GUAAA_METMP|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus

Query: 4 GVPAEFS 10
GVP+EF+
Sbjct: 114 GVPSEFT 120


>sp|FRHA_METJA|COENZYME F420 hydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 3 AGVPAE 8
AGVPAE
Sbjct: 264 AGVPAE 269


>sp|PURL_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanopyrus kandleri (strain AV19 /

Query: 2 EAGVPAEF 9
EAGVPA+
Sbjct: 679 EAGVPAQV 686


>sp|G3P_METTH|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 GEAGVP 6
GEAG+P
Sbjct: 62 GEAGIP 67




443|Sequence|2211|2220|PAEFSIWTRE

>sp|DGGGP_METVS|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 AEFSIWTRE 10
A FS+W RE
Sbjct: 163 AMFSMWARE 171


>sp|DGGGP_METMP|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 AEFSIWTRE 10
A F++W+RE
Sbjct: 163 ALFAMWSRE 171


>sp|DGGGP_METM7|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C7 /

Query: 2 AEFSIWTRE 10
A F++W+RE
Sbjct: 163 ALFAMWSRE 171


>sp|DGGGP_METM6|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C6 /

Query: 2 AEFSIWTRE 10
A F++W+RE
Sbjct: 163 ALFAMWSRE 171


>sp|DGGGP_METM5|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C5 /

Query: 2 AEFSIWTRE 10
A F++W+RE
Sbjct: 163 ALFAMWSRE 171


>sp|SYC_HALSA|CYSTEINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 PAEFSIW 7
PA+F++W
Sbjct: 180 PADFALW 186


>sp|GUAAA_METMP|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus

Query: 1 PAEFSIW 7
P+EF+ W
Sbjct: 116 PSEFTAW 122


>sp|GUAAA_METM7|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus

Query: 1 PAEFSIW 7
P+EF+ W
Sbjct: 116 PSEFTAW 122


>sp|GUAAA_METM5|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus

Query: 1 PAEFSIW 7
P+EF+ W
Sbjct: 116 PSEFTAW 122


>sp|RS8_THEPD|SMALL ribosomal subunit protein uS8|Thermofilum pendens (strain DSM

Query: 3 EFSIWTRE 10
EF W RE
Sbjct: 84 EFEAWERE 91


>sp|SYC_HALMA|CYSTEINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PAEFSIW 7
PA+F++W
Sbjct: 177 PADFALW 183


>sp|SPEE_PYRNV|POLYAMINE aminopropyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 AEFSIW 7
AE+S+W
Sbjct: 225 AEYSVW 230


>sp|SPEE_PYRAE|POLYAMINE aminopropyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 AEFSIW 7
AE+S+W
Sbjct: 225 AEYSVW 230


>sp|Y1016_METJA|UNCHARACTERIZED protein MJ1016|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EFSIWTR 9
EFS WT+
Sbjct: 2 EFSEWTK 8


>sp|DEGLY_PYRHO|DEGLYCASE PH1704|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PAEFSIWTRE 10
PA+ W RE
Sbjct: 151 PADLYAWMRE 160


>sp|GLNA_SULAC|GLUTAMINE synthetase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 FSIWTRE 10
FS+WT++
Sbjct: 272 FSLWTKD 278




444|Sequence|2216|2225|IWTREAGAGG

>sp|Y3004_HALWD|UPF0179 protein HQ_3004A|Haloquadratum walsbyi (strain DSM 16790

Query: 1 IWTREAGAGG 10
+ TREA AGG
Sbjct: 80 VATREAYAGG 89


>sp|LON_METBF|LON protease|Methanosarcina barkeri (strain Fusaro /

Query: 2 WTREAGAGG 10
+TREAG G
Sbjct: 543 YTREAGVRG 551


>sp|METE_SULTO|METHIONINE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 WTREAGAG 9
W RE G G
Sbjct: 250 WDREIGVG 257


>sp|METE_SULAC|METHIONINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 WTREAGAG 9
W RE G G
Sbjct: 251 WDREIGVG 258


>sp|RISC_METTH|RIBOFLAVIN synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 TREAGAG 9
TREAG G
Sbjct: 136 TREAGMG 142


>sp|SYL_PYRCJ|LEUCINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 WTREAGAGG 10
W EAG GG
Sbjct: 425 WLAEAGLGG 433


>sp|PCKG_SULAC|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 WTREAG 7
WT+E+G
Sbjct: 353 WTKESG 358


>sp|GATA_CENSY|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Cenarchaeum symbiosum (strain A)

Query: 2 WTREAGAGG 10
+ RE G+GG
Sbjct: 9 YVREVGSGG 17


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 WTREAGAG 9
W R+AG G
Sbjct: 1014 WFRDAGFG 1021


>sp|AROA_METAC|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 2 WTREAG 7
W REAG
Sbjct: 284 WDREAG 289




445|Sequence|2221|2230|AGAGGLSIAV

>sp|PURL_PICTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Picrophilus torridus (strain ATCC 700027

Query: 2 GAGGLSIAV 10
G GGLS AV
Sbjct: 281 GGGGLSSAV 289


>sp|PURL_SACI3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.27)

Query: 2 GAGGLSIAV 10
G GGL++AV
Sbjct: 254 GGGGLAVAV 262


>sp|AROE_METS3|SHIKIMATE dehydrogenase (NADP(+))|Methanobrevibacter smithii (strain ATCC

Query: 1 AGAGGLSIAV 10
AGAGG S A+
Sbjct: 126 AGAGGASRAI 135


>sp|COFE_METAC|COENZYME F420:L-glutamate ligase|Methanosarcina acetivorans (strain ATCC

Query: 2 GAGGLSIAV 10
GAGG+ +AV
Sbjct: 209 GAGGIPVAV 217


>sp|PURL_SACI7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 GAGGLSIAV 10
G GGL++AV
Sbjct: 254 GGGGLAVAV 262


>sp|PURL_SACI6|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.4 /

Query: 2 GAGGLSIAV 10
G GGL++AV
Sbjct: 254 GGGGLAVAV 262


>sp|PURL_SACI4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.14.25 /

Query: 2 GAGGLSIAV 10
G GGL++AV
Sbjct: 254 GGGGLAVAV 262


>sp|PURL_SACI2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 GAGGLSIAV 10
G GGL++AV
Sbjct: 254 GGGGLAVAV 262


>sp|PURL_SACI1|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 GAGGLSIAV 10
G GGL++AV
Sbjct: 254 GGGGLAVAV 262


>sp|PURL_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GAGGLSIAV 10
G GGL++AV
Sbjct: 254 GGGGLAVAV 262


>sp|Y1648_AERPE|UNCHARACTERIZED protein APE_1648.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 AGAGGLSIA 9
AG GGLS+A
Sbjct: 124 AGVGGLSVA 132


>sp|CBIT_METMP|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 2 GAGGLSIAV 10
G+GG+S+ +
Sbjct: 42 GSGGMSVEI 50


>sp|CBIT_METM7|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 2 GAGGLSIAV 10
G+GG+S+ +
Sbjct: 42 GSGGMSVEI 50


>sp|CBIT_METM6|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 2 GAGGLSIAV 10
G+GG+S+ +
Sbjct: 42 GSGGMSVEI 50


>sp|CBIT_METM5|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 2 GAGGLSIAV 10
G+GG+S+ +
Sbjct: 42 GSGGMSVEI 50




446|Sequence|2226|2235|LSIAVEGPSK

>sp|IF2P_METKA|PROBABLE translation initiation factor IF-2|Methanopyrus kandleri (strain

Query: 1 LSIAVEGPSK 10
L I VEGP K
Sbjct: 229 LKIEVEGPGK 238


>sp|IF2P_METS5|PROBABLE translation initiation factor IF-2|Metallosphaera sedula (strain

Query: 4 AVEGPSK 10
AVEGP+K
Sbjct: 231 AVEGPAK 237


>sp|ASPD_METJA|L-ASPARTATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LSIAVEGPSK 10
LSIA E P+K
Sbjct: 195 LSIAAEFPAK 204


>sp|IF2P_HALLT|PROBABLE translation initiation factor IF-2|Halorubrum lacusprofundi (strain

Query: 1 LSIAVEGPS 9
+SIA++GP+
Sbjct: 534 VSIAIDGPT 542


>sp|IF2P_HALWD|PROBABLE translation initiation factor IF-2|Haloquadratum walsbyi (strain

Query: 1 LSIAVEGPS 9
+SIA++GP+
Sbjct: 557 VSIAIDGPT 565


>sp|PRIS_HYPBU|DNA primase small subunit PriS|Hyperthermus butylicus (strain DSM 5456

Query: 4 AVEGPS 9
AVEGPS
Sbjct: 254 AVEGPS 259


>sp|PELO_HYPBU|PROTEIN pelota homolog|Hyperthermus butylicus (strain DSM 5456

Query: 3 IAVEGPSK 10
I +EGP K
Sbjct: 82 IVIEGPEK 89




447|Sequence|2231|2240|EGPSKAEITF

>sp|Y995_META3|UPF0288 protein Maeo_0995|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 EGPSKA 6
EGPSKA
Sbjct: 205 EGPSKA 210


>sp|RL32_HALSA|LARGE ribosomal subunit protein eL32|Halobacterium salinarum (strain

Query: 2 GPSKAE 7
GPSKAE
Sbjct: 18 GPSKAE 23




448|Sequence|2236|2245|AEITFDDHKN

>sp|RL3_METPE|LARGE ribosomal subunit protein uL3|Methanosphaerula palustris (strain

Query: 3 ITFDDHKN 10
I DDHKN
Sbjct: 53 IMVDDHKN 60


>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 1 AEITFDD 7
EITFDD
Sbjct: 598 GEITFDD 604


>sp|PURL_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 AEITFDDHK 9
AEIT DD K
Sbjct: 309 AEITLDDIK 317


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 EITFDDHK 9
EIT+DD K
Sbjct: 1334 EITYDDEK 1341


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 AEITFDDH 8
AEI FDD+
Sbjct: 1036 AEINFDDY 1043


>sp|SYR_THEKO|ARGININE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 AEITFDD 7
EITFDD
Sbjct: 31 GEITFDD 37


>sp|RS3A_SACI7|SMALL ribosomal subunit protein eS1|Saccharolobus islandicus (strain

Query: 1 AEITFDD 7
+E+TFDD
Sbjct: 149 SELTFDD 155


>sp|RS3A_SACI6|SMALL ribosomal subunit protein eS1|Saccharolobus islandicus (strain

Query: 1 AEITFDD 7
+E+TFDD
Sbjct: 149 SELTFDD 155


>sp|RS3A_SACI4|SMALL ribosomal subunit protein eS1|Saccharolobus islandicus (strain

Query: 1 AEITFDD 7
+E+TFDD
Sbjct: 149 SELTFDD 155


>sp|RS3A_SACI3|SMALL ribosomal subunit protein eS1|Saccharolobus islandicus (strain

Query: 1 AEITFDD 7
+E+TFDD
Sbjct: 149 SELTFDD 155


>sp|RS3A_SACI2|SMALL ribosomal subunit protein eS1|Saccharolobus islandicus (strain

Query: 1 AEITFDD 7
+E+TFDD
Sbjct: 149 SELTFDD 155


>sp|RS3A_SACI1|SMALL ribosomal subunit protein eS1|Saccharolobus islandicus (strain

Query: 1 AEITFDD 7
+E+TFDD
Sbjct: 149 SELTFDD 155


>sp|PRIS_THEKO|DNA primase small subunit PriS|Thermococcus kodakarensis (strain ATCC

Query: 2 EITFDD 7
E+TFDD
Sbjct: 183 EVTFDD 188


>sp|AMPD_METJA|ANHYDROMEVALONATE phosphate decarboxylase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 AEITFDDHK 9
A+ITFD+ K
Sbjct: 188 ADITFDELK 196




449|Sequence|2241|2250|DDHKNGSCGV

>sp|PIMT_METBU|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 3 HKNGSCGV 10
H +GSCG+
Sbjct: 123 HDDGSCGL 130


>sp|APGM_PYRAR|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 NGSCGV 10
NGSCG+
Sbjct: 37 NGSCGI 42


>sp|AGL10_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl10|Haloferax volcanii

Query: 2 DHKNGSC 8
DH +GSC
Sbjct: 169 DHAHGSC 175


>sp|RL3_METPE|LARGE ribosomal subunit protein uL3|Methanosphaerula palustris (strain

Query: 1 DDHKN 5
DDHKN
Sbjct: 56 DDHKN 60


>sp|DHQS_METHJ|3-DEHYDROQUINATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 HKNGSC 8
H NGSC
Sbjct: 243 HGNGSC 248


>sp|Y949_METPE|UPF0179 protein Mpal_0949|Methanosphaerula palustris (strain ATCC

Query: 3 HKNGSCGV 10
H NG+C V
Sbjct: 64 HLNGACAV 71


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 2 DHKNGSCGV 10
++K G+CG+
Sbjct: 88 NNKRGACGI 96


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 DHKNGSCGV 10
++K G+CG+
Sbjct: 88 NNKRGACGI 96


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus

Query: 3 HKNGSCGV 10
+K G+CG+
Sbjct: 81 NKRGACGI 88


>sp|APGM2_ARCFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Archaeoglobus fulgidus (strain ATCC

Query: 4 KNGSCGV 10
K G+CG+
Sbjct: 38 KEGACGI 44


>sp|HCP_METMA|HYDROXYLAMINE reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 KNGSCG 9
KNG CG
Sbjct: 17 KNGVCG 22


>sp|RF1_HALMA|PEPTIDE chain release factor subunit|Haloarcula marismortui (strain ATCC

Query: 1 DDHKNGSCG 9
DDH+ CG
Sbjct: 352 DDHECSRCG 360


>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 HKNGSCGV 10
+K G+CG+
Sbjct: 88 NKRGACGI 95


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 HKNGSCGV 10
+K G+CG+
Sbjct: 88 NKRGACGI 95


>sp|ACDA2_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 3 HKNGSCGV 10
+K G+CG+
Sbjct: 89 NKRGACGI 96




450|Sequence|2246|2255|GSCGVSYIAQ

>sp|MTSA_METMA|METHYLATED-THIOL--COENZYME M methyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 SCGVSY 7
+CGVSY
Sbjct: 312 ACGVSY 317


>sp|OGG1_METTH|PROBABLE N-glycosylase/DNA lyase|Methanothermobacter thermautotrophicus

Query: 2 SCGVSYIA 9
SCGV Y A
Sbjct: 188 SCGVGYRA 195


>sp|BRIX_PYRAE|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrobaculum

Query: 2 SCGVSYIA 9
+CG YIA
Sbjct: 52 ACGARYIA 59


>sp|COFE_METM7|COENZYME F420:L-glutamate ligase|Methanococcus maripaludis (strain C7 /

Query: 1 GSCGVS 6
GSCGV+
Sbjct: 164 GSCGVA 169


>sp|COFE_METM6|COENZYME F420:L-glutamate ligase|Methanococcus maripaludis (strain C6 /

Query: 1 GSCGVS 6
GSCGV+
Sbjct: 164 GSCGVA 169


>sp|TRPC_THEKO|INDOLE-3-GLYCEROL phosphate synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GSCGVSYI 8
G+ G+SYI
Sbjct: 48 GAVGISYI 55


>sp|TRPC_PYRFU|INDOLE-3-GLYCEROL phosphate synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GSCGVSYI 8
G+ G+SYI
Sbjct: 49 GAVGISYI 56


>sp|TRPC_PYRAB|INDOLE-3-GLYCEROL phosphate synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 GSCGVSYI 8
G+ G+SYI
Sbjct: 49 GAVGISYI 56


>sp|KAD_METAR|ADENYLATE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 2 SCGVSY 7
SCG SY
Sbjct: 132 SCGASY 137


>sp|LEU1_METTH|PROBABLE 2-isopropylmalate synthase|Methanothermobacter thermautotrophicus

Query: 3 CGVSYI 8
CGV YI
Sbjct: 98 CGVDYI 103


>sp|Y1621_ARCFU|UPF0324 membrane protein AF_1621|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GSCGVSYIA 9
G CGVS IA
Sbjct: 138 GICGVSAIA 146




451|Sequence|2251|2260|SYIAQEPGNY

>sp|RFCL_METHJ|REPLICATION factor C large subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 SYIAQEPGN 9
S+ +QEPGN
Sbjct: 451 SFSSQEPGN 459


>sp|PURL_HALLT|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halorubrum lacusprofundi (strain ATCC 49239

Query: 4 AQEPGN 9
AQEPGN
Sbjct: 201 AQEPGN 206


>sp|PURL_HALMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloarcula marismortui (strain ATCC 43049

Query: 4 AQEPGN 9
AQEPGN
Sbjct: 189 AQEPGN 194


>sp|PRDPP_METMA|PRENYL-DIPHOSPHATE phosphatase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 IAQEPGNY 10
+ EPGNY
Sbjct: 142 VKAEPGNY 149


>sp|RELB2_METJA|PUTATIVE antitoxin RelB2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SYIAQEPGN 9
SYI E GN
Sbjct: 6 SYITDEKGN 14


>sp|AROD_METS5|3-DEHYDROQUINATE dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 1 SYIAQEPGN 9
SYI+ +PG+
Sbjct: 147 SYISTKPGS 155


>sp|AROA_SULTO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 YIAQEPGNY 10
YI + PG+Y
Sbjct: 213 YIGKVPGDY 221


>sp|UVRB_NATPD|UVRABC system protein B|Natronomonas pharaonis (strain ATCC 35678

Query: 2 YIAQEPGNY 10
Y++ PG+Y
Sbjct: 403 YVSATPGDY 411


>sp|UVRB_HALMA|UVRABC system protein B|Haloarcula marismortui (strain ATCC 43049

Query: 2 YIAQEPGNY 10
Y++ PG+Y
Sbjct: 404 YVSATPGDY 412




452|Sequence|2256|2265|EPGNYEVSIK

>sp|CSG_METMA|MAJOR S-layer protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EPGNYEV 7
EPG YE+
Sbjct: 313 EPGTYEI 319


>sp|PHEA_METJA|PREPHENATE dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PGNYEVSI 9
P NY+VSI
Sbjct: 187 PKNYKVSI 194


>sp|DNLI_METM7|DNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 GNYEVSIK 10
G+YE+S+K
Sbjct: 465 GSYEISVK 472


>sp|DNLI_METM5|DNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 GNYEVSIK 10
G+YE+S+K
Sbjct: 465 GSYEISVK 472


>sp|DNLI_METM6|DNA ligase|Methanococcus maripaludis (strain C6 /

Query: 3 GNYEVSIK 10
G+YE+S+K
Sbjct: 465 GSYEISVK 472


>sp|CSG_HALSA|CELL surface glycoprotein|Halobacterium salinarum (strain ATCC 700922

Query: 1 EPGNYEV 7
EPGNY V
Sbjct: 748 EPGNYTV 754


>sp|CSG_HALS3|CELL surface glycoprotein|Halobacterium salinarum (strain ATCC 29341

Query: 1 EPGNYEV 7
EPGNY V
Sbjct: 748 EPGNYTV 754


>sp|COST_HALSA|TRANSDUCER protein CosT|Halobacterium salinarum (strain ATCC 700922

Query: 1 EPGNYEVSI 9
E GNY+V +
Sbjct: 362 EAGNYDVDV 370


>sp|COST_HALS3|TRANSDUCER protein CosT|Halobacterium salinarum (strain ATCC 29341

Query: 1 EPGNYEVSI 9
E GNY+V +
Sbjct: 362 EAGNYDVDV 370


>sp|PRDPP_METMA|PRENYL-DIPHOSPHATE phosphatase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EPGNYEVSIK 10
EPGNY +++
Sbjct: 145 EPGNYTPALR 154


>sp|DNLI_METVS|DNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 GNYEVSIK 10
G+YE+S+K
Sbjct: 465 GSYEISVK 472


>sp|IMDH_THEAC|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EPGNYEVS 8
EP NY++S
Sbjct: 474 EPPNYQIS 481


>sp|CSG_HALMA|CELL surface glycoprotein|Haloarcula marismortui (strain ATCC 43049

Query: 1 EPGNYEV 7
EPGNY V
Sbjct: 771 EPGNYTV 777


>sp|HIS7_META3|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 GNYEVSIK 10
GNYE++ K
Sbjct: 25 GNYEITTK 32


>sp|Y1225_ARCFU|UNCHARACTERIZED protein AF_1225|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PGNYEVSI 9
PG YEV I
Sbjct: 52 PGEYEVKI 59


>sp|GCSPA_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 2 PGNYEVSI 9
PG YE+ I
Sbjct: 256 PGEYEIDI 263


>sp|SUDHB_PYRFU|SULFIDE dehydrogenase subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EPGNYEVSI 9
E GNY +SI
Sbjct: 122 EKGNYVISI 130


>sp|TIAS_METAC|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanosarcina acetivorans

Query: 1 EPGNYEV 7
EPG YEV
Sbjct: 396 EPGLYEV 402


>sp|LEUC_PYRAR|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 EPGNY 5
EPGNY
Sbjct: 248 EPGNY 252


>sp|PYRH_IGNH4|URIDYLATE kinase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 EPGNYEV 7
EPG YE+
Sbjct: 173 EPGRYEL 179


>sp|CSG_METBF|MAJOR S-layer protein|Methanosarcina barkeri (strain Fusaro /

Query: 1 EPGNYEV 7
+PG YEV
Sbjct: 308 DPGTYEV 314


>sp|LEUC_PYRAE|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EPGNY 5
EPGNY
Sbjct: 248 EPGNY 252


>sp|ARCC_THEVO|CARBAMATE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 EPGNYEV 7
EP NYEV
Sbjct: 18 EPRNYEV 24


>sp|FWDA_METJA|PROTEIN FwdA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EPGNYEVSIK 10
PGN+E +++
Sbjct: 237 HPGNWETTLE 246


>sp|DNLI_METMP|DNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 GNYEVSIK 10
G+YE+S+K
Sbjct: 465 GSYELSVK 472


>sp|RIBL_METFA|FAD synthase|Methanocaldococcus fervens (strain DSM 4213

Query: 2 PGNYEV 7
PG+YEV
Sbjct: 17 PGHYEV 22


>sp|CHEB2_METAC|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 2|Methanosarcina

Query: 2 PGNYEVSI 9
PGNY + I
Sbjct: 239 PGNYHMEI 246


>sp|SPSS_METMA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PGNYEVSIK 10
PG YE+S K
Sbjct: 321 PGFYEISQK 329


>sp|SPSS_METAC|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PGNYEVSIK 10
PG YE+S K
Sbjct: 321 PGFYEISQK 329


>sp|RTCA_STAMF|RNA 3'-terminal phosphate cyclase|Staphylothermus marinus (strain

Query: 1 EPGNYEVSI 9
+PGNY +I
Sbjct: 83 KPGNYRFNI 91


>sp|PANB_THEKO|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 3 GNYEVSIK 10
G+YEVS++
Sbjct: 87 GSYEVSVE 94


>sp|PANB_PYRFU|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GNYEVSIK 10
G+YEVS++
Sbjct: 87 GSYEVSVE 94




453|Sequence|2261|2270|EVSIKFNDEH

>sp|RNP3_PYRHO|RIBONUCLEASE P protein component 3|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VSIKFNDE 9
VSIKFN+E
Sbjct: 32 VSIKFNEE 39


>sp|RL15_PYRHO|LARGE ribosomal subunit protein uL15|Pyrococcus horikoshii (strain ATCC

Query: 2 VSIKFNDEH 10
V++KF DEH
Sbjct: 76 VTLKFIDEH 84


>sp|RL15_PYRFU|LARGE ribosomal subunit protein uL15|Pyrococcus furiosus (strain ATCC

Query: 2 VSIKFNDEH 10
V++KF DEH
Sbjct: 76 VNLKFIDEH 84


>sp|RS12_PYRFU|SMALL ribosomal subunit protein uS12|Pyrococcus furiosus (strain ATCC

Query: 3 SIKFNDEH 10
+IKF DEH
Sbjct: 93 AIKFIDEH 100


>sp|RS12_PYRAB|SMALL ribosomal subunit protein uS12|Pyrococcus abyssi (strain GE5 /

Query: 3 SIKFNDEH 10
+IKF DEH
Sbjct: 93 AIKFIDEH 100


>sp|TRMY_METAR|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanocella arvoryzae

Query: 2 VSIKFNDEH 10
V+IKF+ EH
Sbjct: 64 VTIKFSGEH 72


>sp|PURL_THESM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus sibiricus (strain DSM 12597

Query: 4 IKFNDEH 10
+K NDEH
Sbjct: 421 LKINDEH 427


>sp|PUR5_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 IKFNDEH 10
+K+ND+H
Sbjct: 340 VKYNDKH 346


>sp|CBID_METBU|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 2 VSIKFNDEH 10
V++K N++H
Sbjct: 95 VAVKLNNDH 103


>sp|UVRB_METS3|UVRABC system protein B|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 EVSIKFNDEH 10
++ IK+N++H
Sbjct: 570 KIQIKYNEKH 579




454|Sequence|2266|2275|FNDEHIPESP

>sp|PYRH_METKA|URIDYLATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 FNDEHIPESP 10
+D H+PE+P
Sbjct: 85 LHDLHVPETP 94


>sp|AGLB3_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 3|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FNDEHIPES 9
FND HI E+
Sbjct: 159 FNDHHIWEA 167


>sp|Y694_METJA|UNCHARACTERIZED NOP5 family protein MJ0694|Methanocaldococcus jannaschii (strain

Query: 1 FNDEHIPE 8
FN+E IP+
Sbjct: 32 FNEEEIPD 39


>sp|RPO1N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 2 NDEHIPE 8
NDE IPE
Sbjct: 637 NDEEIPE 643


>sp|RPO1N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 2 NDEHIPE 8
NDE IPE
Sbjct: 636 NDEEIPE 642


>sp|RLMH_METVS|PUTATIVE ribosomal RNA large subunit|Methanococcus vannielii (strain ATCC

Query: 2 NDEHIPESP 10
+DE PE+P
Sbjct: 39 SDEKTPENP 47


>sp|LHRC_SULAC|ATP-DEPENDENT helicase Lhr-Core|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 HIPESP 10
H+PE+P
Sbjct: 414 HVPENP 419


>sp|Y1384_THEVO|PROTEIN TV1384|Thermoplasma volcanium (strain ATCC 51530

Query: 1 FNDEHIPESP 10
N+E +PE P
Sbjct: 28 LNNEKLPEVP 37


>sp|FAU1_HALWD|PROBABLE ribonuclease FAU-1|Haloquadratum walsbyi (strain DSM 16790

Query: 1 FNDEHIPE 8
ND HIP+
Sbjct: 132 LNDVHIPD 139


>sp|Y1298_METVS|UPF0248 protein Mevan_1298|Methanococcus vannielii (strain ATCC 35089

Query: 1 FNDEHIP 7
FN+ HIP
Sbjct: 50 FNETHIP 56


>sp|METK_HALMA|S-ADENOSYLMETHIONINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 DEHIPE 8
DEH+P+
Sbjct: 218 DEHVPD 223


>sp|DABA_NATPD|PROBABLE inorganic carbon transporter subunit|Natronomonas pharaonis (strain

Query: 3 DEHIPES 9
DEH+P S
Sbjct: 430 DEHVPSS 436


>sp|FOLD_METBU|BIFUNCTIONAL protein FolD|Methanococcoides burtonii (strain DSM 6242

Query: 3 DEHIPE 8
D+H+PE
Sbjct: 71 DQHLPE 76


>sp|RS4_METJA|SMALL ribosomal subunit protein uS4|Methanocaldococcus jannaschii (strain

Query: 1 FNDEHIPE 8
FND++ PE
Sbjct: 162 FNDDNHPE 169




455|Sequence|2271|2280|IPESPYLVPV

>sp|PYRF_HALSA|OROTIDINE 5'-phosphate decarboxylase|Halobacterium salinarum (strain ATCC

Query: 1 IPESPYLVP 9
+PE P+LVP
Sbjct: 199 VPELPFLVP 207


>sp|PYRF_HALS3|OROTIDINE 5'-phosphate decarboxylase|Halobacterium salinarum (strain ATCC

Query: 1 IPESPYLVP 9
+PE P+LVP
Sbjct: 199 VPELPFLVP 207


>sp|PYRF_HALLT|OROTIDINE 5'-phosphate decarboxylase|Halorubrum lacusprofundi (strain ATCC

Query: 1 IPESPYLVP 9
+PE P+LVP
Sbjct: 197 VPEIPFLVP 205


>sp|PYRF_HALMA|OROTIDINE 5'-phosphate decarboxylase|Haloarcula marismortui (strain ATCC

Query: 1 IPESPYLVP 9
+P+ P+LVP
Sbjct: 202 VPDIPFLVP 210


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 2 PESPYLV 8
P+SPYL+
Sbjct: 5073 PDSPYLI 5079


Query: 2 PESPY 6
PESPY
Sbjct: 5497 PESPY 5501


>sp|Y1282_METJA|UPF0252 protein MJ1282|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IPESPYLVPV 10
I + PYL+P+
Sbjct: 287 IDQQPYLIPI 296


>sp|MTMB2_METBA|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri

Query: 1 IPESPYLV 8
IP+SPY V
Sbjct: 170 IPKSPYEV 177


>sp|MTMB1_METBA|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri

Query: 1 IPESPYLV 8
IP+SPY V
Sbjct: 170 IPKSPYEV 177


>sp|CAPPA_METTH|PHOSPHOENOLPYRUVATE carboxylase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 PESPYLVP 9
PESP+L P
Sbjct: 424 PESPFLSP 431


>sp|Y177_METMA|MACRO domain-containing protein MM_0177|Methanosarcina mazei (strain ATCC

Query: 1 IPESPYLV 8
IPE+ YLV
Sbjct: 162 IPETVYLV 169


>sp|MTMB3_METBF|MONOMETHYLAMINE methyltransferase MtmB3|Methanosarcina barkeri (strain Fusaro /

Query: 1 IPESPYLV 8
+P+SPY V
Sbjct: 170 VPKSPYEV 177


>sp|MTMB2_METBF|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri (strain Fusaro /

Query: 1 IPESPYLV 8
+P+SPY V
Sbjct: 170 VPKSPYEV 177


>sp|MTMB2_METAC|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina acetivorans (strain ATCC

Query: 1 IPESPYLV 8
+P+SPY V
Sbjct: 170 VPKSPYEV 177


>sp|MTMB1_METBF|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri (strain Fusaro /

Query: 1 IPESPYLV 8
+P+SPY V
Sbjct: 170 VPKSPYEV 177


>sp|PFDA_NITMS|PREFOLDIN subunit alpha|Nitrosopumilus maritimus (strain SCM1)

Query: 2 PESPYLVPV 10
PES LVP+
Sbjct: 51 PESDTLVPI 59


>sp|MTMB1_METAC|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina acetivorans (strain ATCC

Query: 1 IPESPYLV 8
+P+SPY V
Sbjct: 170 VPKSPYEV 177


>sp|CAS5_METJA|CRISPR-ASSOCIATED protein Cas5|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IPESPYLVPV 10
+ E PYL+P+
Sbjct: 201 VKEEPYLLPL 210


>sp|1A1D_PYRFU|PUTATIVE 1-aminocyclopropane-1-carboxylate deaminase|Pyrococcus furiosus

Query: 5 PYLVPV 10
PY++PV
Sbjct: 151 PYIIPV 156


>sp|ENDA_METMA|TRNA-SPLICING endonuclease|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IPESPYLVPV 10
IP S YLV V
Sbjct: 298 IPHSEYLVNV 307


>sp|ENDA_METAC|TRNA-SPLICING endonuclease|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IPESPYLVPV 10
IP S YLV V
Sbjct: 295 IPHSEYLVNV 304


>sp|SYE_KORCO|GLUTAMATE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 IPESPY 6
+PESPY
Sbjct: 519 VPESPY 524




456|Sequence|2276|2285|YLVPVIAPSD

>sp|LYSZ_IGNH4|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Ignicoccus hospitalis

Query: 2 LVPVIAP 8
LVPV+AP
Sbjct: 152 LVPVVAP 158


>sp|PELO_THEVO|PROTEIN pelota homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YLVPVIAPSD 10
YL +IAP D
Sbjct: 25 YLKNIIAPGD 34


>sp|HACB_METJA|METHANOGEN homoaconitase small subunit|Methanocaldococcus jannaschii (strain

Query: 2 LVPVIAPSD 10
L+P+IA +D
Sbjct: 100 LIPIIANTD 108


>sp|FLAJ_METVO|FLAGELLA accessory protein J|Methanococcus voltae

Query: 2 LVPVIAPSD 10
+V V+APSD
Sbjct: 484 MVHVVAPSD 492


>sp|EF1A_SULTO|ELONGATION factor 1-alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LVPVIAPS 9
VPV+AP+
Sbjct: 189 FVPVVAPT 196


>sp|LYSZ_PYRHO|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrococcus horikoshii

Query: 3 VPVIAP 8
VPVIAP
Sbjct: 149 VPVIAP 154


>sp|GLCAE_SULAC|D-GLUCOSAMINE-6-PHOSPHATE 4-epimerase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LVPVIAPSD 10
+P++ PSD
Sbjct: 230 FIPIVIPSD 238


>sp|EF1A_SACS2|ELONGATION factor 1-alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LVPVIAPS 9
VPV+AP+
Sbjct: 189 FVPVVAPA 196


>sp|GLMS_AERPE|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Aeropyrum pernix (strain ATCC 700893

Query: 3 VPVIAPSD 10
V V+APSD
Sbjct: 550 VTVVAPSD 557


>sp|Y609_METJA|UNCHARACTERIZED protein MJ0609|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YLVPVIAPS 9
Y++P +APS
Sbjct: 177 YVIPDLAPS 185


>sp|TRPD_HALVD|ANTHRANILATE phosphoribosyltransferase|Haloferax volcanii (strain ATCC 29605

Query: 2 LVPVIAPS 9
LVPVIA S
Sbjct: 197 LVPVIAES 204




457|Sequence|2281|2290|IAPSDDARRL

>sp|HIS7_METJA|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IAPSDDAR 8
I P DDAR
Sbjct: 98 IIPMDDAR 105


>sp|ACSA_PYRAE|ACETYL-COENZYME A synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 IAPSDDARR 9
+APSD+ R+
Sbjct: 586 VAPSDELRK 594


>sp|RRP4_SULAC|EXOSOME complex component Rrp4|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IAPSDDARR 9
I+P +D RR
Sbjct: 109 ISPGEDVRR 117


>sp|MTRG_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit G|Methanopyrus kandleri (strain AV19

Query: 1 IAPSDDARRL 10
+AP DD R +
Sbjct: 11 VAPEDDIREI 20


>sp|PAN2_METTM|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter marburgensis (strain ATCC

Query: 3 PSDDARRL 10
P DD RR+
Sbjct: 290 PGDDERRM 297


>sp|EF2_STAMF|ELONGATION factor 2|Staphylothermus marinus (strain ATCC 43588

Query: 3 PSDDARRL 10
P+D ARR+
Sbjct: 532 PTDQARRI 539




458|Sequence|2286|2295|DARRLTVMSL

***** No hits found ******


459|Sequence|2291|2300|TVMSLQESGL

>sp|TIAS_HYPBU|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Hyperthermus butylicus

Query: 3 MSLQESGL 10
MS+QE GL
Sbjct: 1 MSIQEDGL 8


>sp|SYTC_SACS2|THREONINE--TRNA ligase catalytic subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 VMSLQESGL 10
+ +LQESGL
Sbjct: 341 ISALQESGL 349


>sp|SYTC_SACI7|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain Y.G.57.14

Query: 2 VMSLQESGL 10
+ +LQESGL
Sbjct: 341 ISALQESGL 349


>sp|SYTC_SACI6|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 2 VMSLQESGL 10
+ +LQESGL
Sbjct: 341 ISALQESGL 349


>sp|SYTC_SACI4|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 2 VMSLQESGL 10
+ +LQESGL
Sbjct: 341 ISALQESGL 349


>sp|SYTC_SACI3|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.16.27)

Query: 2 VMSLQESGL 10
+ +LQESGL
Sbjct: 341 ISALQESGL 349


>sp|SYTC_SACI2|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain L.S.2.15

Query: 2 VMSLQESGL 10
+ +LQESGL
Sbjct: 341 ISALQESGL 349


>sp|SYTC_SACI1|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain Y.N.15.51

Query: 2 VMSLQESGL 10
+ +LQESGL
Sbjct: 341 ISALQESGL 349


>sp|SURE2_PYRAE|5'-NUCLEOTIDASE SurE 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 TVMSLQESGL 10
TV+ L ESG+
Sbjct: 219 TVLGLSESGV 228




460|Sequence|2296|2305|QESGLKVNQP

>sp|NADM_METTI|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanolobus tindarius

Query: 1 QESGLKVNQP 10
QESG+ V QP
Sbjct: 108 QESGILVEQP 117


>sp|TRUD_THEKO|PROBABLE tRNA pseudouridine synthase D|Thermococcus kodakarensis (strain

Query: 2 ESGLKVNQP 10
E GL +N+P
Sbjct: 277 EEGLPLNEP 285


>sp|RL3_PYRNV|LARGE ribosomal subunit protein uL3|Pyrobaculum neutrophilum (strain

Query: 4 GLKVNQP 10
GLK+N+P
Sbjct: 2 GLKINRP 8


>sp|AGO_METJA|PROTEIN argonaute|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ESGLKVNQ 9
E GLK+N+
Sbjct: 647 EEGLKINE 654


>sp|URE3_NATPD|UREASE subunit gamma|Natronomonas pharaonis (strain ATCC 35678

Query: 1 QESGLKVNQP 10
+E G+K+N P
Sbjct: 24 KERGVKLNHP 33


>sp|Y3675_HALWD|UPF0213 protein HQ_3675A|Haloquadratum walsbyi (strain DSM 16790

Query: 2 ESGLKVNQP 10
E G +NQP
Sbjct: 81 EEGTDINQP 89


>sp|RL3_PYRIL|LARGE ribosomal subunit protein uL3|Pyrobaculum islandicum (strain DSM

Query: 4 GLKVNQP 10
GLK+N+P
Sbjct: 6 GLKINRP 12


>sp|RL3_PYRAE|LARGE ribosomal subunit protein uL3|Pyrobaculum aerophilum (strain ATCC

Query: 4 GLKVNQP 10
GLK+N+P
Sbjct: 2 GLKINRP 8


>sp|RL3_PYRAR|LARGE ribosomal subunit protein uL3|Pyrobaculum arsenaticum (strain DSM

Query: 4 GLKVNQP 10
GLK+N+P
Sbjct: 2 GLKINRP 8




461|Sequence|2301|2310|KVNQPASFAI

>sp|KATG_METAC|CATALASE-PEROXIDASE acetivorans (strain ATCC 35395

Query: 1 KVNQPASFA 9
+VNQPA A
Sbjct: 502 EVNQPAELA 510


>sp|Y3697_METBF|UPF0280 protein Mbar_A3697|Methanosarcina barkeri (strain Fusaro /

Query: 3 NQPASFAI 10
N+PASF I
Sbjct: 10 NEPASFPI 17


>sp|RS7_THEAC|SMALL ribosomal subunit protein uS7|Thermoplasma acidophilum (strain ATCC

Query: 3 NQPASFAI 10
N P SFAI
Sbjct: 163 NDPTSFAI 170


>sp|RS7_SULTO|SMALL ribosomal subunit protein uS7|Sulfurisphaera tokodaii (strain DSM

Query: 3 NQPASFAI 10
N P SFAI
Sbjct: 173 NDPKSFAI 180




462|Sequence|2306|2315|ASFAIRLNGA

>sp|KDGA_THETE|2-DEHYDRO-3-DEOXY-D-GLUCONATE/2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE aldolase|Thermoproteus tenax

Query: 1 ASFAIRLNG 9
ASFA+RL+G
Sbjct: 204 ASFAVRLDG 212


>sp|HIS3_PYRCJ|PHOSPHORIBOSYL-AMP cyclohydrolase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 ASFAIRLN 8
ASF IRLN
Sbjct: 118 ASFKIRLN 125


>sp|ASSY_SULAC|ARGININOSUCCINATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 SFAIRLNG 9
S+AI++NG
Sbjct: 71 SYAIKMNG 78


>sp|ASSY_SACS2|ARGININOSUCCINATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 SFAIRLNG 9
++AI+LNG
Sbjct: 71 AYAIKLNG 78




463|Sequence|2311|2320|RLNGAKGKID

>sp|PURP_SACS2|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Saccharolobus solfataricus (strain ATCC

Query: 1 RLNGAKG 7
+LNGAKG
Sbjct: 134 KLNGAKG 140


>sp|HMGCS_METMP|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LNGAKGKID 10
LNGAKG ++
Sbjct: 215 LNGAKGMME 223


>sp|RAD50_PYRHO|DNA double-strand break repair Rad50|Pyrococcus horikoshii (strain ATCC

Query: 2 LNGAKGKID 10
LNG KG+++
Sbjct: 253 LNGKKGRLE 261


>sp|DNAG_HYPBU|DNA primase DnaG|Hyperthermus butylicus (strain DSM 5456

Query: 2 LNGAKGKI 9
L GA+GKI
Sbjct: 190 LEGARGKI 197


>sp|AATB_NITMS|A-TYPE ATP synthase subunit B|Nitrosopumilus maritimus (strain SCM1)

Query: 1 RLNGAKGKI 9
+LNG KG +
Sbjct: 294 KLNGKKGSV 302


>sp|RFHPS_ARCFU|BETA-RIBOFURANOSYLPHENOL 5'-phosphate synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LNGAKGKID 10
LNG+ G++D
Sbjct: 17 LNGSIGRVD 25


>sp|CS12F_MICX1|CRISPR-ASSOCIATED endodeoxyribonuclease Cas12f2|Micrarchaeota archaeon (strain

Query: 2 LNGAKGKID 10
LNG K KID
Sbjct: 209 LNGIKRKID 217


>sp|HMGCS_METM5|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus maripaludis (strain C5 /

Query: 2 LNGAKG 7
LNGAKG
Sbjct: 215 LNGAKG 220


>sp|HMGCS_METM7|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus maripaludis (strain C7 /

Query: 2 LNGAKG 7
LNGAKG
Sbjct: 215 LNGAKG 220




464|Sequence|2316|2325|KGKIDAKVHS

>sp|HEM3_METBF|PROBABLE porphobilinogen deaminase|Methanosarcina barkeri (strain Fusaro /

Query: 1 KGKIDAKVHS 10
+GKID VHS
Sbjct: 66 EGKIDIAVHS 75


>sp|HEM3_THEAC|PROBABLE porphobilinogen deaminase|Thermoplasma acidophilum (strain ATCC

Query: 2 GKIDAKVHS 10
G IDA VHS
Sbjct: 69 GDIDAAVHS 77


>sp|HEM3_ARCFU|PROBABLE porphobilinogen deaminase|Archaeoglobus fulgidus (strain ATCC

Query: 1 KGKIDAKVHS 10
+GK+D VHS
Sbjct: 66 EGKVDVAVHS 75


>sp|FBPAP_METS5|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Metallosphaera sedula (strain ATCC 51363

Query: 1 KGKIDAKVH 9
+G++D KVH
Sbjct: 62 RGELDTKVH 70


>sp|FBPAP_SULTO|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KGKIDAKVH 9
+G++D KVH
Sbjct: 62 RGELDTKVH 70


>sp|HEM3_HALSA|PROBABLE porphobilinogen deaminase|Halobacterium salinarum (strain ATCC

Query: 1 KGKIDAKVHS 10
+G +DA VHS
Sbjct: 70 EGTVDAAVHS 79


>sp|HEM3_THEVO|PROBABLE porphobilinogen deaminase|Thermoplasma volcanium (strain ATCC

Query: 1 KGKIDAKVHS 10
+G+ID VHS
Sbjct: 67 RGEIDVAVHS 76


>sp|HEM3_METMA|PROBABLE porphobilinogen deaminase|Methanosarcina mazei (strain ATCC

Query: 2 GKIDAKVHS 10
G+ID VHS
Sbjct: 67 GEIDIAVHS 75


>sp|HEM3_METAC|PROBABLE porphobilinogen deaminase|Methanosarcina acetivorans (strain ATCC

Query: 2 GKIDAKVHS 10
G+ID VHS
Sbjct: 67 GEIDIAVHS 75


>sp|ADEC_METTP|ADENINE deaminase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 GKIDAKVH 9
G IDA VH
Sbjct: 67 GSIDAHVH 74


>sp|Y1610_PYRAB|UPF0216 protein PYRAB16100|Pyrococcus abyssi (strain GE5 /

Query: 1 KGKIDAKV 8
+GK++AKV
Sbjct: 86 RGKVEAKV 93


>sp|DNAG_METHJ|DNA primase DnaG|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 GKIDAKVHS 10
G+ID K+ S
Sbjct: 54 GRIDVKIQS 62


>sp|HEM3_IGNH4|PROBABLE porphobilinogen deaminase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 KGKIDAKVHS 10
+GK D VHS
Sbjct: 71 EGKADVAVHS 80


>sp|RL19E_METJA|LARGE ribosomal subunit protein eL19|Methanocaldococcus jannaschii

Query: 2 GKIDAKVH 9
GKID KV+
Sbjct: 115 GKIDRKVY 122


>sp|RS27_METJA|SMALL ribosomal subunit protein eS27|Methanocaldococcus jannaschii

Query: 1 KGKIDAKV 8
KGK+ AK+
Sbjct: 50 KGKVKAKI 57


>sp|GATE_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Archaeoglobus fulgidus (strain ATCC

Query: 1 KGKIDAKV 8
+GK+D KV
Sbjct: 591 RGKVDGKV 598


>sp|GATE_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina mazei (strain ATCC

Query: 1 KGKIDAKVHS 10
+GK+D K+ S
Sbjct: 610 RGKVDGKILS 619




465|Sequence|2321|2330|AKVHSPSGAV

>sp|ASPD_METHJ|L-ASPARTATE dehydrogenase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 KVHSPSGAV 10
K+H PSGA+
Sbjct: 112 KIHIPSGAI 120


>sp|ASPD_METTH|L-ASPARTATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 AKVHSPSGAV 10
A +H PSGA+
Sbjct: 116 ATIHVPSGAI 125


>sp|GGR_PYRHO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 AKVHSPSG 8
AK++SPSG
Sbjct: 71 AKIYSPSG 78


>sp|GGR_PYRAB|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus abyssi (strain GE5 /

Query: 1 AKVHSPSG 8
AK++SPSG
Sbjct: 71 AKIYSPSG 78


>sp|UVRC_METTH|UVRABC system protein C|Methanothermobacter thermautotrophicus (strain

Query: 2 KVHSPSGA 9
K+HSP G
Sbjct: 326 KIHSPEGG 333


>sp|AATA_PYRAB|A-TYPE ATP synthase subunit A|Pyrococcus abyssi (strain GE5 /

Query: 1 AKVHSPSGAV 10
AKV +PSG +
Sbjct: 175 AKVKTPSGEI 184


>sp|ASPD_METKA|L-ASPARTATE dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 2 KVHSPSGAV 10
++H PSGAV
Sbjct: 121 RLHVPSGAV 129


>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 AKVHSPSGAV 10
AKV +PSG +
Sbjct: 175 AKVKTPSGEI 184


>sp|AATA_PYRFU|A-TYPE ATP synthase subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AKVHSPSGAV 10
AKV +PSG +
Sbjct: 175 AKVKTPSGEI 184


>sp|RNJ_PYRAB|RIBONUCLEASE J|Pyrococcus abyssi (strain GE5 /

Query: 3 VHSPSGAV 10
+H+P GAV
Sbjct: 165 IHTPEGAV 172


>sp|UDGB_PYRAE|TYPE-5 uracil-DNA glycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 AKVHSPSG 8
A+VH+P G
Sbjct: 4 ARVHTPRG 11


>sp|Y975_PYRAB|UPF0200 protein PYRAB09750|Pyrococcus abyssi (strain GE5 /

Query: 3 VHSPSGA 9
+HSP GA
Sbjct: 112 IHSPPGA 118


>sp|R1PKT_HALXS|ATP-DEPENDENT ribose-1-phosphate kinase|Halopiger xanaduensis (strain DSM 18323

Query: 1 AKVHSPSGA 9
A+VH+P+G+
Sbjct: 216 AEVHTPTGS 224


>sp|RAD50_METJA|DNA double-strand break repair Rad50|Methanocaldococcus jannaschii

Query: 2 KVHSPSGAV 10
+VH+P+G +
Sbjct: 902 RVHAPNGVL 910


>sp|SYA_HYPBU|ALANINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 AKVHSPSGAV 10
AK H SGAV
Sbjct: 473 AKKHGASGAV 482


>sp|RNJ_HALSA|RIBONUCLEASE J|Halobacterium salinarum (strain ATCC 700922

Query: 3 VHSPSGAV 10
+H+P GAV
Sbjct: 161 LHTPEGAV 168


>sp|FLAK_METJA|PREFLAGELLIN peptidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VHSPSGAV 10
+H+P GA+
Sbjct: 97 IHTPLGAI 104


>sp|LON_METBF|LON protease|Methanosarcina barkeri (strain Fusaro /

Query: 3 VHSPSGA 9
+H PSGA
Sbjct: 673 IHVPSGA 679


>sp|HIS8_HALLT|HISTIDINOL-PHOSPHATE aminotransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 4 HSPSGAV 10
H+PSG+V
Sbjct: 164 HNPSGSV 170




466|Sequence|2326|2335|PSGAVEECHV

>sp|SYT_METBU|THREONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PSGAVEEC 8
PSGA+E C
Sbjct: 486 PSGAIERC 493


>sp|SYT_METBF|THREONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PSGAVEEC 8
PSGA+E C
Sbjct: 486 PSGAIERC 493


>sp|SYT_METAR|THREONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 PSGAVEEC 8
PSGA+E C
Sbjct: 488 PSGAIERC 495


>sp|SYT_METMA|THREONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PSGAVEEC 8
PSGA+E C
Sbjct: 485 PSGAIERC 492


>sp|SYT_METAC|THREONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PSGAVEEC 8
PSGA+E C
Sbjct: 486 PSGAIERC 493


>sp|NTPPA_THEKO|DTTP/UTP pyrophosphatase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PSGAVEECHV 10
PS A EEC +
Sbjct: 26 PSSASEECSI 35


>sp|MOAC_METBU|PROBABLE cyclic pyranopterin monophosphate synthase|Methanococcoides

Query: 1 PSGAVEECHV 10
PS A+E HV
Sbjct: 139 PSTAIENIHV 148


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 PSGAVE 6
PSGAVE
Sbjct: 8997 PSGAVE 9002


>sp|SYR_METB6|ARGININE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 SGAVEECH 9
+GA EEC+
Sbjct: 461 AGAFEECY 468


>sp|GGGPS_METMJ|GERANYLGERANYLGLYCERYL phosphate synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PSGAVEE 7
P GAVEE
Sbjct: 21 PRGAVEE 27


>sp|Y1005_PYRIL|PROTEIN Pisl_1005|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PSGAVEEC 8
P AVEEC
Sbjct: 147 PQVAVEEC 154


>sp|Y011_PYRAR|PROTEIN Pars_0011|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PSGAVEEC 8
P AVEEC
Sbjct: 147 PQVAVEEC 154


>sp|Y1980_AERPE|PROTEIN APE_1980.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 PSGAVEECHV 10
P GAV EC +
Sbjct: 177 PPGAVVECGI 186




467|Sequence|2331|2340|EECHVSELEP

>sp|ACSA_METTP|ACETYL-COENZYME A synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 ECHVSELEP 10
EC+ EL+P
Sbjct: 260 ECYTEELDP 268


>sp|SYT_THEAC|THREONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 CHVSELEP 10
CH +LEP
Sbjct: 442 CHSHDLEP 449


>sp|RL14E_METTH|LARGE ribosomal subunit protein eL14|Methanothermobacter

Query: 3 CHVSELEP 10
C+VS LEP
Sbjct: 45 CNVSHLEP 52


>sp|MCH_METB6|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanoregula boonei (strain DSM 21154

Query: 1 EECHV 5
EECHV
Sbjct: 155 EECHV 159


>sp|TMG10_ARCFU|TRNA (guanine(10)-N2)-dimethyltransferase|Archaeoglobus fulgidus

Query: 3 CHVSELE 9
C VSELE
Sbjct: 65 CSVSELE 71




468|Sequence|2336|2345|SELEPDKYAV

>sp|ARGDC_AERPE|ARGININE decarboxylase proenzyme|Aeropyrum pernix (strain ATCC 700893

Query: 1 SELEPDKYAV 10
SEL+P KY V
Sbjct: 105 SELKPRKYTV 114


>sp|ADEC_META3|ADENINE deaminase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 ELEPDKYA 9
E++PD YA
Sbjct: 334 EIKPDNYA 341


>sp|RNZ_THEVO|RIBONUCLEASE Z|Thermoplasma volcanium (strain ATCC 51530

Query: 2 ELEPDK 7
ELEPDK
Sbjct: 120 ELEPDK 125


>sp|Y1266_METJA|UNCHARACTERIZED protein MJ1266|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 EPDKYAV 10
EPD+YA+
Sbjct: 318 EPDQYAL 324


>sp|SYI_SACS2|ISOLEUCINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LEPDKYAV 10
EPDKY +
Sbjct: 603 FEPDKYTL 610


>sp|ARGJ_METAC|GLUTAMATE N-acetyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 ELEPDKYAV 10
+LEPD AV
Sbjct: 96 DLEPDTVAV 104


>sp|IPYR_SULAC|INORGANIC pyrophosphatase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 ELEPDKYA 9
ELEP KY
Sbjct: 140 ELEPGKYV 147


>sp|KADA_METTH|ADENYLATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 ELEPDKYAV 10
ELEPD + +
Sbjct: 105 ELEPDMFVL 113


>sp|Y1717_ARCFU|UNCHARACTERIZED protein AF_1717|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SELEPDKYA 9
+++ PDK+A
Sbjct: 5 TDISPDKFA 13


>sp|Y035_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 3 LEPDKY 8
L+PDKY
Sbjct: 132 LDPDKY 137


>sp|ACDB_METKA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanopyrus kandleri

Query: 2 ELEPDKYAV 10
E+EPDK V
Sbjct: 47 EIEPDKVEV 55




469|Sequence|2341|2350|DKYAVRFIPH

>sp|PURA_PYRHO|ADENYLOSUCCINATE synthetase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KYAVRFIP 9
KYAVR IP
Sbjct: 51 KYAVRQIP 58


>sp|PYRH_METVS|URIDYLATE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 2 KYAVRFIP 9
KY+V F+P
Sbjct: 87 KYSVNFVP 94


>sp|Y1266_METJA|UNCHARACTERIZED protein MJ1266|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KYAVRFIP 9
KY RF+P
Sbjct: 152 KYVFRFVP 159


>sp|PURA_METS3|ADENYLOSUCCINATE synthetase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 DKYAVRFIP 9
+KY +R IP
Sbjct: 50 EKYGLRLIP 58


>sp|SERA_METJA|D-3-PHOSPHOGLYCERATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DKYAVRFIP 9
D Y V FIP
Sbjct: 440 DGYEVSFIP 448


>sp|Y267_ARCFU|UNCHARACTERIZED protein AF_0267|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DKYAVRFIPH 10
DK+AVR++ +
Sbjct: 302 DKFAVRYMDY 311


>sp|PURA_THESM|ADENYLOSUCCINATE synthetase|Thermococcus sibiricus (strain DSM 12597

Query: 2 KYAVRFIP 9
KYAVR +P
Sbjct: 51 KYAVRQLP 58


>sp|PURA_PYRAB|ADENYLOSUCCINATE synthetase|Pyrococcus abyssi (strain GE5 /

Query: 2 KYAVRFIP 9
KYAVR +P
Sbjct: 51 KYAVRQLP 58


>sp|DNAG_METMA|DNA primase DnaG|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 AVRFIPH 10
A+RF PH
Sbjct: 429 AIRFRPH 435


>sp|PURA_PYRFU|ADENYLOSUCCINATE synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KYAVRFIP 9
KYAVR +P
Sbjct: 51 KYAVRQLP 58


>sp|PURA_THEKO|ADENYLOSUCCINATE synthetase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 KYAVRFIP 9
KYAVR +P
Sbjct: 51 KYAVRQLP 58


>sp|Y266_ARCFU|UNCHARACTERIZED transporter AF_0266|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KYAVRFI 8
KY+VRF+
Sbjct: 22 KYSVRFL 28


>sp|PURA_PYRSS|ADENYLOSUCCINATE synthetase|Pyrococcus sp. (strain ST700)

Query: 2 KYAVRFIP 9
KYAVR +P
Sbjct: 51 KYAVRQLP 58


>sp|RS8_THEAC|SMALL ribosomal subunit protein uS8|Thermoplasma acidophilum (strain

Query: 1 DKYAVRFIP 9
+KY R++P
Sbjct: 86 EKYEARYLP 94


>sp|TRMY_NATPD|TRNA (pseudouridine(54)-N(1))-methyltransferase|Natronomonas pharaonis

Query: 1 DKYAVRF 7
D+YA+RF
Sbjct: 58 DEYAIRF 64


>sp|CUTA_SULAC|GLYCERALDEHYDE dehydrogenase large chain|Sulfolobus acidocaldarius (strain ATCC

Query: 1 DKYAVR 6
DKYAVR
Sbjct: 117 DKYAVR 122




470|Sequence|2346|2355|RFIPHENGVH

>sp|EF2_CENSY|ELONGATION factor 2|Cenarchaeum symbiosum (strain A)

Query: 2 FIPHENGVH 10
F+PHE+ H
Sbjct: 587 FVPHEDAAH 595


>sp|RS7_ARCFU|SMALL ribosomal subunit protein uS7|Archaeoglobus fulgidus (strain ATCC

Query: 1 RFIPHENGVH 10
+++PH +G H
Sbjct: 37 KYVPHNHGRH 46


>sp|KAE1_ARCFU|TRNA N6-adenosine threonylcarbamoyltransferase|Archaeoglobus fulgidus

Query: 2 FIPHENGVH 10
+IP E G+H
Sbjct: 31 YIPKEGGIH 39


>sp|KAE1_STAMF|TRNA N6-adenosine threonylcarbamoyltransferase|Staphylothermus marinus

Query: 1 RFIPHENGVH 10
++IP + G+H
Sbjct: 33 KYIPEKGGIH 42


>sp|NEP1_THESM|RIBOSOMAL RNA small subunit methyltransferase|Thermococcus sibiricus (strain

Query: 2 FIPHENGV 9
FI HENGV
Sbjct: 149 FIMHENGV 156


>sp|RS7_THECE|SMALL ribosomal subunit protein uS7|Thermococcus celer

Query: 1 RFIPHENGVH 10
R +PH +G H
Sbjct: 42 RLLPHSHGRH 51


>sp|BIOW_METM6|6-CARBOXYHEXANOATE--COA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 RFIPHENGV 9
R + HENGV
Sbjct: 37 RAMSHENGV 45


>sp|BIOW_METM5|6-CARBOXYHEXANOATE--COA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 RFIPHENGV 9
R + HENGV
Sbjct: 37 RAMSHENGV 45


>sp|KAE1_IGNH4|TRNA N6-adenosine threonylcarbamoyltransferase|Ignicoccus hospitalis

Query: 2 FIPHENGVH 10
++P E G+H
Sbjct: 32 YVPKEGGIH 40


>sp|KPRS_HALSA|RIBOSE-PHOSPHATE pyrophosphokinase|Halobacterium salinarum (strain ATCC 700922

Query: 4 PHENGV 9
PHE+GV
Sbjct: 122 PHEDGV 127


>sp|KPRS_HALS3|RIBOSE-PHOSPHATE pyrophosphokinase|Halobacterium salinarum (strain ATCC 29341

Query: 4 PHENGV 9
PHE+GV
Sbjct: 122 PHEDGV 127


>sp|Y870_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 3 IPHENG 8
IPHE+G
Sbjct: 61 IPHESG 66


>sp|XDH2_HALVD|D-XYLOSE 1-dehydrogenase (NADP(+)) 2|Haloferax volcanii (strain ATCC 29605

Query: 2 FIPHENGVH 10
+IP NG+H
Sbjct: 67 YIPLPNGLH 75


>sp|BIOW_METMP|6-CARBOXYHEXANOATE--COA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 RFIPHENGV 9
R + HENGV
Sbjct: 37 RAMNHENGV 45


>sp|BIOW_METM7|6-CARBOXYHEXANOATE--COA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 RFIPHENGV 9
R + HENGV
Sbjct: 37 RAMGHENGV 45


>sp|TRUD_ARCFU|PROBABLE tRNA pseudouridine synthase D|Archaeoglobus fulgidus (strain ATCC

Query: 1 RFIPHENG 8
RFI HE G
Sbjct: 168 RFITHEVG 175


>sp|CYDE_METM7|L-CYSTEINE desulfidase|Methanococcus maripaludis (strain C7 /

Query: 3 IPHENGV 9
I HENG+
Sbjct: 356 ISHENGI 362


>sp|GGGPS_HYPBU|GERANYLGERANYLGLYCERYL phosphate synthase|Hyperthermus butylicus (strain DSM 5456

Query: 3 IPHENG 8
IP+ENG
Sbjct: 148 IPYENG 153


>sp|RS7_THEGJ|SMALL ribosomal subunit protein uS7|Thermococcus gammatolerans (strain

Query: 1 RFIPHENGVH 10
R +PH +G H
Sbjct: 42 RILPHSHGRH 51


>sp|Y2147_ARCFU|UNCHARACTERIZED protein AF_2147|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 IPHENGV 9
I HENG+
Sbjct: 130 IEHENGI 136


>sp|RS7_THEON|SMALL ribosomal subunit protein uS7|Thermococcus onnurineus (strain

Query: 1 RFIPHENGVH 10
R +PH +G H
Sbjct: 42 RILPHSHGRH 51


>sp|APGM_SULAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Sulfolobus acidocaldarius (strain ATCC

Query: 4 PHENGV 9
PHE GV
Sbjct: 169 PHETGV 174


>sp|RFCS_PYRHO|REPLICATION factor C small subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RFIPHENG 8
R I HENG
Sbjct: 229 REITHENG 236


>sp|RS6E_SACS2|SMALL ribosomal subunit protein eS6|Saccharolobus solfataricus (strain

Query: 2 FIPHENG 8
F P+ENG
Sbjct: 183 FYPNENG 189


>sp|RS7_METMA|SMALL ribosomal subunit protein uS7|Methanosarcina mazei (strain ATCC

Query: 3 IPHENGVH 10
+PH +G H
Sbjct: 34 VPHSSGKH 41


>sp|RS7_METBF|SMALL ribosomal subunit protein uS7|Methanosarcina barkeri (strain

Query: 3 IPHENGVH 10
+PH +G H
Sbjct: 30 VPHSSGKH 37


>sp|RS7_METAC|SMALL ribosomal subunit protein uS7|Methanosarcina acetivorans (strain

Query: 3 IPHENGVH 10
+PH +G H
Sbjct: 34 VPHSSGKH 41


>sp|RS13_METLZ|SMALL ribosomal subunit protein uS13|Methanocorpusculum labreanum (strain

Query: 1 RFIPHENGV 9
R I HENG+
Sbjct: 118 RGIRHENGL 126


>sp|LEU1_PYRFU|2-ISOPROPYLMALATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 HENGVH 10
HE+G+H
Sbjct: 295 HESGIH 300


>sp|LEU1_METMA|PROBABLE 2-isopropylmalate synthase|Methanosarcina mazei (strain ATCC

Query: 5 HENGVH 10
HE+G+H
Sbjct: 299 HESGIH 304


>sp|LEU1_METJA|2-ISOPROPYLMALATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 HENGVH 10
HE+G+H
Sbjct: 303 HESGIH 308


>sp|LEU1_METAC|PROBABLE 2-isopropylmalate synthase|Methanosarcina acetivorans (strain ATCC

Query: 5 HENGVH 10
HE+G+H
Sbjct: 299 HESGIH 304


>sp|CIMA_METTH|PUTATIVE (R)-citramalate synthase CimA|Methanothermobacter

Query: 5 HENGVH 10
HE+G+H
Sbjct: 281 HESGIH 286


>sp|CIMA_METPE|PUTATIVE (R)-citramalate synthase CimA|Methanosphaerula palustris (strain

Query: 5 HENGVH 10
HE+G+H
Sbjct: 286 HESGIH 291


>sp|CIMA_METMJ|PUTATIVE (R)-citramalate synthase CimA|Methanoculleus marisnigri (strain

Query: 5 HENGVH 10
HE+G+H
Sbjct: 285 HESGIH 290


>sp|CIMA_ARCFU|PUTATIVE (R)-citramalate synthase CimA|Archaeoglobus fulgidus (strain ATCC

Query: 5 HENGVH 10
HE+G+H
Sbjct: 283 HESGIH 288


>sp|AKSA_METMA|HOMOCITRATE synthase AksA|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 HENGVH 10
HE+G+H
Sbjct: 302 HESGIH 307


>sp|AKSA_METJA|HOMOCITRATE synthase AksA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 HENGVH 10
HE+G+H
Sbjct: 313 HESGIH 318


>sp|AKSA_METAC|HOMOCITRATE synthase AksA|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 HENGVH 10
HE+G+H
Sbjct: 302 HESGIH 307


>sp|NRPR_METMP|GLOBAL nitrogen regulator NrpR|Methanococcus maripaludis (strain DSM 14266

Query: 3 IPHENG 8
+PHE+G
Sbjct: 275 VPHESG 280


>sp|LEU1_PYRAB|2-ISOPROPYLMALATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 5 HENGVH 10
HE+G+H
Sbjct: 294 HESGIH 299


>sp|FLPA_PYRIL|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrobaculum islandicum (strain

Query: 1 RFIPHENGVH 10
+FIP + G H
Sbjct: 72 KFIPIQEGTH 81


>sp|CIMA_METKA|PUTATIVE (R)-citramalate synthase CimA|Methanopyrus kandleri (strain AV19 /

Query: 5 HENGVH 10
HE+G+H
Sbjct: 295 HESGIH 300


>sp|LEU1_METKA|PROBABLE 2-isopropylmalate synthase|Methanopyrus kandleri (strain AV19 /

Query: 5 HENGVH 10
HE+G+H
Sbjct: 284 HESGIH 289


>sp|APGM1_METJA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanocaldococcus jannaschii (strain

Query: 4 PHENGV 9
PHE GV
Sbjct: 166 PHEEGV 171


>sp|RS7_METBU|SMALL ribosomal subunit protein uS7|Methanococcoides burtonii (strain

Query: 3 IPHENGVH 10
+PH +G H
Sbjct: 31 VPHTSGKH 38


>sp|AKSA_METKA|HOMOCITRATE synthase AksA|Methanopyrus kandleri (strain AV19 /

Query: 5 HENGVH 10
HE+G+H
Sbjct: 298 HESGIH 303


>sp|RS7_PYRHO|SMALL ribosomal subunit protein uS7|Pyrococcus horikoshii (strain ATCC

Query: 1 RFIPHENGVH 10
R +PH +G H
Sbjct: 45 RLLPHTHGRH 54


>sp|RS7_PYRAB|SMALL ribosomal subunit protein uS7|Pyrococcus abyssi (strain GE5 /

Query: 1 RFIPHENGVH 10
R +PH +G H
Sbjct: 42 RLLPHTHGRH 51


>sp|LEU1_ARCFU|PROBABLE 2-isopropylmalate synthase|Archaeoglobus fulgidus (strain ATCC

Query: 5 HENGVH 10
HE+G+H
Sbjct: 287 HESGIH 292


>sp|RS7_PYRFU|SMALL ribosomal subunit protein uS7|Pyrococcus furiosus (strain ATCC

Query: 1 RFIPHENGVH 10
R +PH +G H
Sbjct: 42 RLLPHTHGRH 51


>sp|KAE1B_METMJ|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 4 PHENGV 9
PHE GV
Sbjct: 335 PHEGGV 340


>sp|LEU1_SACS2|2-ISOPROPYLMALATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 HENGVH 10
HE+G+H
Sbjct: 297 HESGIH 302


>sp|LEU1_IGNH4|PROBABLE 2-isopropylmalate synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 5 HENGVH 10
HE+G+H
Sbjct: 300 HESGIH 305


>sp|AKSA_METTH|HOMOCITRATE synthase AksA|Methanothermobacter thermautotrophicus (strain ATCC

Query: 5 HENGVH 10
HE+G+H
Sbjct: 299 HESGIH 304


>sp|FLPA_PYRNV|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrobaculum neutrophilum (strain

Query: 1 RFIPHENGVH 10
+F+P + G H
Sbjct: 72 KFVPIQEGTH 81


>sp|KAE1B_PICTO|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 FIPHENGVH 10
++P G+H
Sbjct: 31 YVPEHGGIH 39




471|Sequence|2351|2360|ENGVHTIDVK

>sp|KAE1_SACS2|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus

Query: 2 NGVHTIDV 9
NG+H ID+
Sbjct: 177 NGIHVIDI 184


>sp|KAE1_SULAC|TRNA N6-adenosine threonylcarbamoyltransferase|Sulfolobus acidocaldarius

Query: 2 NGVHTIDV 9
NGVH ID+
Sbjct: 179 NGVHQIDI 186


>sp|MFNB_METKA|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 ENGVHTIDVK 10
E G H IDVK
Sbjct: 20 EGGAHIIDVK 29


>sp|OFOB1_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit beta|Aeropyrum pernix (strain ATCC

Query: 2 NGVHTI 7
NGVHTI
Sbjct: 63 NGVHTI 68


>sp|RS2_METKA|SMALL ribosomal subunit protein uS2|Methanopyrus kandleri (strain AV19

Query: 2 NGVHTIDVK 10
+G+H IDV+
Sbjct: 40 DGLHVIDVR 48


>sp|KAE1_SULTO|TRNA N6-adenosine threonylcarbamoyltransferase|Sulfurisphaera tokodaii

Query: 2 NGVHTIDV 9
NGVH ID+
Sbjct: 179 NGVHQIDL 186


>sp|SYH_AERPE|HISTIDINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 ENGVHTIDVK 10
E GV+++DVK
Sbjct: 329 ELGVYSLDVK 338


>sp|RS2_METST|SMALL ribosomal subunit protein uS2|Methanosphaera stadtmanae (strain

Query: 2 NGVHTIDVK 10
+G+H +DVK
Sbjct: 37 DGLHVLDVK 45


>sp|FOLCP_HALSA|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 1 ENGVHTIDV 9
ENGV ID+
Sbjct: 587 ENGVDVIDI 595


>sp|COFG_HALSA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 ENGVHTIDV 9
E +HTIDV
Sbjct: 181 EQRLHTIDV 189


>sp|COFG_HALS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 ENGVHTIDV 9
E +HTIDV
Sbjct: 181 EQRLHTIDV 189


>sp|GCSPB_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 1 ENGVHTIDV 9
E GV T+DV
Sbjct: 397 ETGVRTLDV 405


>sp|Y864_THEVO|UPF0173 metal-dependent hydrolase TV0864|Thermoplasma volcanium (strain

Query: 1 ENGVHTIDV 9
E+G++TID+
Sbjct: 81 ESGINTIDI 89


>sp|KAE1_SACI1|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 2 NGVHTIDV 9
NG H ID+
Sbjct: 177 NGKHAIDI 184


>sp|MFNB_META3|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 GVHTIDVK 10
G H IDVK
Sbjct: 20 GAHIIDVK 27


>sp|KAE1_SACI7|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 2 NGVHTIDV 9
NG H ID+
Sbjct: 177 NGKHAIDI 184


>sp|KAE1_SACI2|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 2 NGVHTIDV 9
NG H ID+
Sbjct: 177 NGKHAIDI 184


>sp|KAE1_SACI6|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 2 NGVHTIDV 9
NG H ID+
Sbjct: 177 NGKHAIDI 184


>sp|KAE1_SACI4|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 2 NGVHTIDV 9
NG H ID+
Sbjct: 177 NGKHAIDI 184


>sp|KAE1_SACI3|TRNA N6-adenosine threonylcarbamoyltransferase|Saccharolobus islandicus

Query: 2 NGVHTIDV 9
NG H ID+
Sbjct: 177 NGKHAIDI 184


>sp|GCSPB_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 1 ENGVHTIDV 9
E GV T+DV
Sbjct: 397 ETGVRTLDV 405


>sp|Y1153_METTH|UNCHARACTERIZED protein MTH_1153|Methanothermobacter thermautotrophicus (strain

Query: 1 ENGVHTI 7
E+G+HT+
Sbjct: 411 EDGIHTL 417


>sp|Y1292_METJA|UNCHARACTERIZED protein MJ1292|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ENGVHTIDV 9
E GVHT+ V
Sbjct: 88 EKGVHTVFV 96


>sp|LEUC_METB6|3-ISOPROPYLMALATE dehydratase large subunit|Methanoregula boonei (strain DSM 21154

Query: 1 ENGVHTIDV 9
E G+H D+
Sbjct: 87 EQGIHNYDI 95




472|Sequence|2356|2365|TIDVKFNGSH

>sp|SODF_SACS2|SUPEROXIDE dismutase [Fe]|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 IDVKFNGSH 10
IDV +NG H
Sbjct: 31 IDVHYNGHH 39


>sp|SODF_ACIAM|SUPEROXIDE dismutase [Fe]|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 IDVKFNGSH 10
IDV +NG H
Sbjct: 31 IDVHYNGHH 39


>sp|SODF_SULAC|SUPEROXIDE dismutase [Fe]|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IDVKFNGSH 10
IDV +NG H
Sbjct: 31 IDVHYNGHH 39


>sp|HIS6_THEKO|IMIDAZOLE glycerol phosphate synthase subunit|Thermococcus kodakarensis

Query: 2 IDVKFNGS 9
ID K+NGS
Sbjct: 129 IDAKWNGS 136


>sp|HIS6_THEGJ|IMIDAZOLE glycerol phosphate synthase subunit|Thermococcus gammatolerans

Query: 2 IDVKFNGS 9
ID K+NGS
Sbjct: 129 IDAKWNGS 136


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 IDVKFNG 8
+DV+FNG
Sbjct: 910 VDVRFNG 916


>sp|TRI_THEVO|TRICORN protease|Thermoplasma volcanium (strain ATCC 51530

Query: 2 IDVKFNG 8
+DV+FNG
Sbjct: 871 VDVRFNG 877


>sp|MFNA_METAC|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosarcina acetivorans

Query: 1 TIDVKFNGS 9
+IDV F GS
Sbjct: 80 SIDVPFGGS 88


>sp|Y1625_ARCFU|UNCHARACTERIZED protein AF_1625|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TIDVKFN 7
++DVKFN
Sbjct: 99 SVDVKFN 105


>sp|RGYR_METJA|REVERSE gyrase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IDVKFNG 8
+D+KF+G
Sbjct: 1471 VDIKFDG 1477


>sp|TRMY_METAR|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanocella arvoryzae

Query: 2 IDVKFNGSH 10
+ +KF+G H
Sbjct: 64 VTIKFSGEH 72


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 IDVKFNG 8
+D+K+NG
Sbjct: 272 VDLKYNG 278


>sp|PYRG_METHJ|CTP synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 IDVKFNGSH 10
+D++ N SH
Sbjct: 78 LDIELNSSH 86


>sp|HIS6_THEON|IMIDAZOLE glycerol phosphate synthase subunit|Thermococcus onnurineus (strain

Query: 2 IDVKFNGSH 10
ID K+NG +
Sbjct: 129 IDAKWNGEY 137


>sp|HIS6_PYRAE|IMIDAZOLE glycerol phosphate synthase subunit|Pyrobaculum aerophilum (strain

Query: 2 IDVKFNGSH 10
ID K+NG +
Sbjct: 132 IDAKWNGEY 140


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 IDVKFNG 8
+D+K+NG
Sbjct: 272 VDLKYNG 278


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 IDVKFNG 8
+D+K+NG
Sbjct: 269 VDLKYNG 275




473|Sequence|2361|2370|FNGSHVVGSP

>sp|MCRB_METTM|METHYL-COENZYME M reductase I subunit|Methanothermobacter marburgensis (strain ATCC

Query: 1 FNGSHVV 7
FNG+H+V
Sbjct: 375 FNGNHIV 381


>sp|MCRB_METTH|METHYL-COENZYME M reductase I subunit|Methanothermobacter thermautotrophicus

Query: 1 FNGSHVV 7
FNG+H+V
Sbjct: 375 FNGNHIV 381


>sp|MTRA_METV3|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanococcus voltae (strain ATCC

Query: 2 NGSHVVGSP 10
NG +VVG+P
Sbjct: 15 NGEYVVGNP 23


>sp|MTRA_METMP|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanococcus maripaludis (strain

Query: 2 NGSHVVGSP 10
NG +VVG+P
Sbjct: 15 NGEYVVGNP 23


>sp|MCRB_METFE|METHYL-COENZYME M reductase subunit beta|Methanothermus fervidus

Query: 1 FNGSHVV 7
FNG+H+V
Sbjct: 375 FNGNHIV 381


>sp|MTRA1_METTM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 1|Methanothermobacter marburgensis

Query: 2 NGSHVVGSP 10
NG ++VG P
Sbjct: 15 NGDYIVGDP 23


>sp|MTRA1_METTH|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 1|Methanothermobacter

Query: 2 NGSHVVGSP 10
NG ++VG P
Sbjct: 15 NGDYIVGDP 23


>sp|MCRB_METVA|METHYL-COENZYME M reductase subunit beta|Methanococcus vannielii

Query: 1 FNGSHVV 7
FNG+HVV
Sbjct: 375 FNGNHVV 381


>sp|MCRB_METJA|METHYL-COENZYME M reductase I subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FNGSHVV 7
FNG+H+V
Sbjct: 379 FNGNHIV 385


>sp|HIS8_THEGJ|HISTIDINOL-PHOSPHATE aminotransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 FNGSHVVGSP 10
F G+H+V +P
Sbjct: 92 FEGNHIVITP 101


>sp|MCRB_METVO|METHYL-COENZYME M reductase subunit beta|Methanococcus voltae

Query: 1 FNGSHVV 7
FNG+HVV
Sbjct: 375 FNGNHVV 381


>sp|GYRB_ARCFU|DNA gyrase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GSHVVG 8
GSHVVG
Sbjct: 284 GSHVVG 289


>sp|MTRA_METM7|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanococcus maripaludis (strain

Query: 2 NGSHVVGSP 10
NG +V+G+P
Sbjct: 15 NGEYVLGNP 23


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 GSHVVGSP 10
G H+ GSP
Sbjct: 79 GWHITGSP 86


>sp|RNZ_THEKO|RIBONUCLEASE Z|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FNGSHVVGSP 10
F+G H +G P
Sbjct: 62 FHGDHYLGIP 71


>sp|MCRB_METBF|METHYL-COENZYME M reductase subunit beta|Methanosarcina barkeri (strain Fusaro /

Query: 1 FNGSHVV 7
FNG+HVV
Sbjct: 373 FNGNHVV 379


>sp|RNZ_PYRHO|RIBONUCLEASE Z|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FNGSHVVGSP 10
F+G H +G P
Sbjct: 62 FHGDHYLGLP 71


>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GSHVVGSP 10
G HV G+P
Sbjct: 77 GYHVTGTP 84


>sp|RNZ_PYRAB|RIBONUCLEASE Z|Pyrococcus abyssi (strain GE5 /

Query: 1 FNGSHVVGSP 10
F+G H +G P
Sbjct: 62 FHGDHYLGLP 71


>sp|RNZ_SULAC|RIBONUCLEASE Z|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FNGSHVVGSP 10
+G HV+G P
Sbjct: 61 LHGDHVLGLP 70


>sp|RNZ_IGNH4|RIBONUCLEASE Z|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 FNGSHVVGSP 10
+G HV+G P
Sbjct: 64 LHGDHVLGLP 73


>sp|RNJL_METJA|RNASE J-like protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FNGSHVVGS 9
+N H++GS
Sbjct: 128 YNAGHILGS 136


>sp|LYSY_HALMA|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 FNGSHVVGSP 10
F G H VG+P
Sbjct: 336 FQGLHPVGAP 345


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 GSHVVGSP 10
G HV G+P
Sbjct: 84 GFHVTGTP 91


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 GSHVVGSP 10
G HV G+P
Sbjct: 87 GFHVTGTP 94


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GSHVVGSP 10
G HV G+P
Sbjct: 77 GFHVTGTP 84


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 GSHVVGSP 10
G HV G+P
Sbjct: 87 GFHVTGTP 94


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 GSHVVGSP 10
G HV G+P
Sbjct: 87 GFHVTGTP 94


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 GSHVVGSP 10
G HV G+P
Sbjct: 77 GFHVTGTP 84


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 GSHVVGSP 10
G HV G+P
Sbjct: 77 GFHVTGTP 84


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 GSHVVGSP 10
G HV G+P
Sbjct: 77 GFHVTGTP 84


>sp|SYL_ARCFU|LEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GSHVVGSP 10
G HV G+P
Sbjct: 74 GFHVTGTP 81


>sp|RNZ_SULTO|RIBONUCLEASE Z|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 NGSHVVGSP 10
+G HV+G P
Sbjct: 62 HGDHVLGLP 70


>sp|RNZ_HALMA|RIBONUCLEASE Z|Haloarcula marismortui (strain ATCC 43049

Query: 1 FNGSHVVGSP 10
+G HV+G P
Sbjct: 62 LHGDHVLGIP 71


>sp|LYSY_HALWD|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 FNGSHVVGSP 10
F G H VG+P
Sbjct: 337 FTGLHPVGAP 346


>sp|GLYA_METJA|SERINE hydroxymethyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FNGSHVVG 8
++G+HV+G
Sbjct: 195 YDGAHVLG 202


>sp|GLYA_META3|SERINE hydroxymethyltransferase|Methanococcus aeolicus (strain ATCC

Query: 1 FNGSHVVG 8
++G+HV+G
Sbjct: 195 YDGAHVLG 202


>sp|RNZ_METM5|RIBONUCLEASE Z|Methanococcus maripaludis (strain C5 /

Query: 1 FNGSHVVGSP 10
+G HV+G P
Sbjct: 61 LHGDHVLGIP 70


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 FNGSHVVG 8
FNG HV G
Sbjct: 3372 FNGEHVGG 3379


>sp|GLYA_METTH|SERINE hydroxymethyltransferase|Methanothermobacter thermautotrophicus

Query: 1 FNGSHVVG 8
++G+HV+G
Sbjct: 196 YDGAHVLG 203


>sp|RNZ_METJA|RIBONUCLEASE Z|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FNGSHVVGSP 10
+G H++G P
Sbjct: 64 LHGDHILGIP 73


>sp|RNZ_METMP|RIBONUCLEASE Z|Methanococcus maripaludis (strain DSM 14266

Query: 1 FNGSHVVGSP 10
+G HV+G P
Sbjct: 61 LHGDHVLGLP 70


>sp|NIFD_METMP|NITROGENASE molybdenum-iron protein alpha chain|Methanococcus maripaludis

Query: 1 FNGSHVVGS 9
FN H+VG+
Sbjct: 103 FNLKHIVGT 111


>sp|MCRY_METFV|METHYL-COENZYME M reductase II subunit|Methanothermus fervidus (strain ATCC 43054

Query: 1 FNGSHVV 7
F+G+HVV
Sbjct: 375 FHGNHVV 381


>sp|GLYA_THEVO|SERINE hydroxymethyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 FNGSHVVG 8
++G+HV+G
Sbjct: 194 YDGAHVLG 201


>sp|MTRA_METEZ|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanohalobium evestigatum (strain

Query: 3 GSHVVGSP 10
GSH+ G P
Sbjct: 33 GSHLEGQP 40


>sp|GLYA_THEAC|SERINE hydroxymethyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 1 FNGSHVVG 8
++G+HV+G
Sbjct: 194 YDGAHVLG 201


>sp|RNZ_PICTO|RIBONUCLEASE Z|Picrophilus torridus (strain ATCC 700027

Query: 1 FNGSHVVGSP 10
F+G H G P
Sbjct: 65 FHGDHFFGLP 74


>sp|RNZ_NANEQ|RIBONUCLEASE Z|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 NGSHVVGSP 10
+G H++G P
Sbjct: 61 HGDHILGLP 69


>sp|MCRY_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FNGSHVV 7
F+G+HVV
Sbjct: 376 FHGNHVV 382


>sp|GLYA_METTM|SERINE hydroxymethyltransferase|Methanothermobacter marburgensis (strain

Query: 1 FNGSHVVG 8
++G+HV+G
Sbjct: 196 YDGAHVLG 203


>sp|IF6_METBU|TRANSLATION initiation factor 6|Methanococcoides burtonii (strain DSM 6242

Query: 1 FNGSHVVGS 9
NGS VVGS
Sbjct: 51 INGSIVVGS 59


>sp|Y280_METAC|UNCHARACTERIZED solute-binding protein MA_0280|Methanosarcina acetivorans (strain

Query: 2 NGSHVVGSP 10
NG V GSP
Sbjct: 283 NGEVVTGSP 291


>sp|NIFD_METMI|NITROGENASE molybdenum-iron protein alpha chain|Methanococcus maripaludis

Query: 1 FNGSHVVGS 9
FN H+VG+
Sbjct: 103 FNLKHIVGT 111


>sp|LYSY_NATPD|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 FNGSHVVGSP 10
F G H VG+P
Sbjct: 337 FAGLHPVGAP 346


>sp|MCRY_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 1 FNGSHVV 7
F+G+HVV
Sbjct: 375 FHGNHVV 381


>sp|RNZ_METM6|RIBONUCLEASE Z|Methanococcus maripaludis (strain C6 /

Query: 1 FNGSHVVGSP 10
+G H++G P
Sbjct: 61 LHGDHILGLP 70


>sp|RNZ_METVS|RIBONUCLEASE Z|Methanococcus vannielii (strain ATCC 35089

Query: 1 FNGSHVVGSP 10
+G H++G P
Sbjct: 61 LHGDHILGIP 70




474|Sequence|2366|2375|VVGSPFKVRV

>sp|RNJ_HALSA|RIBONUCLEASE J|Halobacterium salinarum (strain ATCC 700922

Query: 1 VVGSPFKVRV 10
+VGSPF + +
Sbjct: 101 IVGSPFTIEL 110


>sp|MCRAM_METAC|[METHYL coenzyme M reductase]-L-arginine

Query: 1 VVGSPFKVR 9
++GSPF +R
Sbjct: 263 LIGSPFAIR 271


>sp|DCD_IGNH4|DCTP deaminase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 VVGSPFKVRV 10
++GS F VRV
Sbjct: 128 IIGSSFPVRV 137


>sp|AROC_IGNH4|CHORISMATE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 VGSPFKVRV 10
VG+P ++RV
Sbjct: 288 VGAPIRIRV 296


>sp|LEUC_PYRCJ|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum calidifontis (strain DSM

Query: 1 VVGSPFKVRV 10
VV +PF VRV
Sbjct: 152 VVPTPFAVRV 161


>sp|RTCA_THESM|RNA 3'-terminal phosphate cyclase|Thermococcus sibiricus (strain DSM

Query: 2 VGSPFKVRV 10
+G P KVRV
Sbjct: 336 IGKPGKVRV 344




475|Sequence|2371|2380|FKVRVGEPGQ

>sp|Y528_PYRFU|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus furiosus (strain

Query: 3 VRVGEPGQ 10
+RVGEPG+
Sbjct: 216 IRVGEPGE 223


>sp|Y1254_IGNH4|UPF0173 metal-dependent hydrolase Igni_1254|Ignicoccus hospitalis (strain

Query: 2 KVRVGEPGQ 10
KVRV EPG+
Sbjct: 219 KVRVMEPGE 227


>sp|Y912_ARCFU|UNCHARACTERIZED protein AF_0912|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KVRVGEP 8
KV+VGEP
Sbjct: 233 KVKVGEP 239


>sp|GCSH_AERPE|PROBABLE glycine cleavage system H|Aeropyrum pernix (strain ATCC 700893

Query: 1 FKVRVGEPGQ 10
FK++V +PG+
Sbjct: 115 FKIKVEDPGE 124


>sp|SYL_NANEQ|LEUCINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 FKVRVGEPGQ 10
+KV +G+P Q
Sbjct: 60 YKVSIGDPKQ 69


>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 2 KVRVGEP 8
KVR+GEP
Sbjct: 68 KVRLGEP 74


>sp|IORB_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorB|Pyrococcus horikoshii (strain ATCC

Query: 1 FKVRVGE 7
+KVRVGE
Sbjct: 32 YKVRVGE 38


>sp|CBIA_SACS2|COBYRINATE a,c-diamide synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FKVRVGE 7
FKVR+G+
Sbjct: 396 FKVRIGK 402


>sp|IORB_THEKO|INDOLEPYRUVATE oxidoreductase subunit IorB|Thermococcus kodakarensis (strain

Query: 1 FKVRVGE 7
+KVRVGE
Sbjct: 32 YKVRVGE 38


>sp|IORB_PYRAB|INDOLEPYRUVATE oxidoreductase subunit IorB|Pyrococcus abyssi (strain GE5 /

Query: 1 FKVRVGE 7
+KVRVGE
Sbjct: 32 YKVRVGE 38


>sp|RL11_KORCO|LARGE ribosomal subunit protein uL11|Korarchaeum cryptofilum (strain

Query: 1 FKVRVGEP 8
F++RVG P
Sbjct: 64 FEIRVGTP 71


>sp|SYFB_KORCO|PHENYLALANINE--TRNA ligase beta subunit|Korarchaeum cryptofilum (strain OPF8)

Query: 1 FKVRVGE 7
F+VRVGE
Sbjct: 82 FEVRVGE 88


>sp|PUR5_PYRAB|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 KVRVGEPG 9
K +VGEPG
Sbjct: 33 KGKVGEPG 40


>sp|CAS6_HALMT|CRISPR-ASSOCIATED endoribonuclease Cas6|Haloferax mediterranei (strain ATCC 33500

Query: 3 VRVGEPG 9
V VGEPG
Sbjct: 107 VDVGEPG 113


>sp|AGLU_SACS2|ALPHA-GLUCOSIDASE solfataricus (strain ATCC 35092

Query: 1 FKVRVGEP 8
+KV +GEP
Sbjct: 13 YKVVIGEP 20


>sp|AGLU_SACS9|ALPHA-GLUCOSIDASE solfataricus (strain 98/2) (Sulfolobus

Query: 1 FKVRVGEP 8
+KV +GEP
Sbjct: 13 YKVVIGEP 20


>sp|RIBL_PYRFU|FAD synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VRVGEPGQ 10
V +GEPG+
Sbjct: 74 VVIGEPGE 81


>sp|UPP_PYRIL|URACIL phosphoribosyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 RVGEPGQ 10
RVG+PG+
Sbjct: 151 RVGQPGR 157


>sp|RL11_DESA1|LARGE ribosomal subunit protein uL11|Desulfurococcus amylolyticus

Query: 1 FKVRVGEP 8
F+VRVG P
Sbjct: 64 FEVRVGIP 71




476|Sequence|2376|2385|GEPGQAGNPA

>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 1 GEPGQAGNP 9
GEPG G P
Sbjct: 398 GEPGLVGGP 406


>sp|SYM_METMA|METHIONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EPGQAGNP 9
EPG+ NP
Sbjct: 172 EPGELQNP 179


>sp|SYM_METAC|METHIONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 EPGQAGNP 9
EPG+ NP
Sbjct: 172 EPGELQNP 179




477|Sequence|2381|2390|AGNPALVSAY

>sp|SYT_HYPBU|THREONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 GNPALVSAY 10
G PAL++ Y
Sbjct: 399 GKPALITVY 407


>sp|BRIX_ARCFU|PROBABLE Brix domain-containing ribosomal biogenesis|Archaeoglobus

Query: 2 GNPALVSAY 10
GNPA+++ Y
Sbjct: 55 GNPAILNLY 63


>sp|MTRH_META3|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanococcus aeolicus (strain ATCC

Query: 2 GNPALVSAY 10
GNPALV +
Sbjct: 69 GNPALVQVF 77


>sp|MTRH_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanocaldococcus jannaschii

Query: 2 GNPALVSAY 10
GNPALV +
Sbjct: 69 GNPALVQVF 77


>sp|SPSS1_METHJ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 GNPALVSAY 10
G+P L++AY
Sbjct: 100 GDPVLLTAY 108


>sp|GSA_NITMS|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 AGNPALVSA 9
AGNP VSA
Sbjct: 294 AGNPISVSA 302


>sp|GSA1_CENSY|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase 1|Cenarchaeum symbiosum (strain A)

Query: 1 AGNPALVSA 9
AGNP VSA
Sbjct: 292 AGNPVSVSA 300


>sp|COXX_AERPE|PROTOHEME IX farnesyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 2 GNPALVSA 9
GNP LVS+
Sbjct: 211 GNPRLVSS 218


>sp|Y045_METMA|PUTATIVE ankyrin repeat protein MM_0045|Methanosarcina mazei (strain ATCC

Query: 2 GNPALVSA 9
GN AL+SA
Sbjct: 134 GNTALISA 141


>sp|HTPX_PYRAE|PROTEASE HtpX homolog|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GNPALVSA 9
GNPA+++A
Sbjct: 217 GNPAILAA 224




478|Sequence|2386|2395|LVSAYGTGLE

>sp|AAT_METJA|PROBABLE aspartate aminotransferase|Methanocaldococcus jannaschii (strain

Query: 2 VSAYGTGLE 10
VS YG G+E
Sbjct: 318 VSEYGDGVE 326


>sp|6PGD_HALVD|6-PHOSPHOGLUCONATE dehydrogenase, NAD(+)-dependent, decarboxylating|Haloferax volcanii

Query: 1 LVSAYGTGLE 10
L+ AYG G E
Sbjct: 179 LMQAYGEGFE 188


>sp|Y1561_METJA|UNCHARACTERIZED protein MJ1561|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VSAYGT 7
VSAYGT
Sbjct: 198 VSAYGT 203


>sp|TATCT_HALVD|SEC-INDEPENDENT protein translocase protein TatCt|Haloferax volcanii (strain ATCC

Query: 1 LVSAYGTGL 9
L++AYG GL
Sbjct: 688 LMAAYGVGL 696


>sp|MTNA_METJA|PUTATIVE methylthioribose-1-phosphate isomerase|Methanocaldococcus

Query: 3 SAYGTGL 9
SAYGT L
Sbjct: 151 SAYGTAL 157


>sp|SECY_SACS2|PROTEIN translocase subunit SecY|Saccharolobus solfataricus (strain ATCC

Query: 1 LVSAYGTGL 9
L+ AYGTG+
Sbjct: 427 LLGAYGTGI 435


>sp|SYFA_METTH|PHENYLALANINE--TRNA ligase alpha subunit|Methanothermobacter thermautotrophicus (strain

Query: 2 VSAYGTGLE 10
V+A+G G+E
Sbjct: 469 VAAFGLGIE 477


>sp|AATB_PYRIL|A-TYPE ATP synthase subunit B|Pyrobaculum islandicum (strain DSM 4184

Query: 1 LVSAYGTGLE 10
L+SAY LE
Sbjct: 375 LISAYSKALE 384


>sp|AATB_PYRNV|A-TYPE ATP synthase subunit B|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 LVSAYGTGLE 10
L+SAY LE
Sbjct: 375 LISAYSKALE 384


>sp|LIVH_METJA|PROBABLE branched-chain amino acid transport|Methanocaldococcus jannaschii

Query: 1 LVSAYGTG 8
L SA+GTG
Sbjct: 269 LASAFGTG 276


>sp|GCSPA_HALSA|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Halobacterium

Query: 1 LVSAYGTGL 9
+ ++YGTGL
Sbjct: 268 MPTSYGTGL 276


>sp|GCSPA_HALS3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Halobacterium

Query: 1 LVSAYGTGL 9
+ ++YGTGL
Sbjct: 268 MPTSYGTGL 276




479|Sequence|2391|2400|GTGLEGGTTG

>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 4 LEGGTT 9
LEGGTT
Sbjct: 434 LEGGTT 439


>sp|NADE_METBU|NH(3)-DEPENDENT NAD(+) synthetase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GTGLEGGTTG 10
GTG+EG G
Sbjct: 20 GTGIEGAVVG 29


>sp|HOSA_PYRHO|HOMOCITRATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GLEGGTT 9
G+EGG T
Sbjct: 203 GIEGGAT 209


>sp|TRM1_METPE|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaerula palustris

Query: 1 GTGLEGGTT 9
G GLEG T
Sbjct: 97 GAGLEGRVT 105


>sp|SYDND_HALWD|ASPARTATE--TRNA(ASP/ASN) ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GTGLEGGT 8
TG EGGT
Sbjct: 163 ATGTEGGT 170


>sp|SYDND_HALVO|ASPARTATE--TRNA(ASP/ASN) ligase|Haloferax volcanii (Halobacterium volcanii)

Query: 1 GTGLEGGT 8
TG EGGT
Sbjct: 163 ATGTEGGT 170




480|Sequence|2396|2405|GGTTGIQSEF

>sp|GCS2_HALMA|GLUTAMATE--CYSTEINE ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 GTTGIQSEF 10
GT GI+ EF
Sbjct: 14 GTLGIEEEF 22


>sp|GCS2_NATPD|GLUTAMATE--CYSTEINE ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GTTGIQSEF 10
GT GI+ EF
Sbjct: 13 GTLGIEEEF 21


>sp|GGGPS_HALMA|GERANYLGERANYLGLYCERYL phosphate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GGTTGIQSE 9
GGTTG+ E
Sbjct: 39 GGTTGMTEE 47


>sp|GCS2_HALWD|GLUTAMATE--CYSTEINE ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 GTTGIQSEF 10
GT G++ EF
Sbjct: 13 GTLGVEEEF 21


>sp|GCS2_HALSA|GLUTAMATE--CYSTEINE ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 GTTGIQSEF 10
GT G++ EF
Sbjct: 13 GTLGVEEEF 21


>sp|GCS2_HALS3|GLUTAMATE--CYSTEINE ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 GTTGIQSEF 10
GT G++ EF
Sbjct: 13 GTLGVEEEF 21


>sp|GCS2_HALVD|GLUTAMATE--CYSTEINE ligase|Haloferax volcanii (strain ATCC 29605

Query: 2 GTTGIQSEF 10
GT G++ EF
Sbjct: 13 GTLGVEEEF 21


>sp|GGGPS_NATPD|GERANYLGERANYLGLYCERYL phosphate synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GGTTGIQSE 9
GGTTG+ E
Sbjct: 40 GGTTGMTEE 48


>sp|KATG_METAC|CATALASE-PEROXIDASE acetivorans (strain ATCC 35395

Query: 5 GIQSEF 10
GIQSEF
Sbjct: 518 GIQSEF 523




481|Sequence|2401|2410|IQSEFFINTT

>sp|Y1571_ARCFU|UNCHARACTERIZED protein AF_1571|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IQSEFFIN 8
I++EFF+N
Sbjct: 139 IEAEFFVN 146


>sp|SYR_IGNH4|ARGININE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 IQSEFFIN 8
+QS F+IN
Sbjct: 158 VQSRFYIN 165




482|Sequence|2406|2415|FINTTRAGPG

>sp|RS4E_METMA|SMALL ribosomal subunit protein eS4|Methanosarcina mazei (strain ATCC

Query: 1 FINTTRAGP 9
+I+TTR GP
Sbjct: 22 WISTTRPGP 30


>sp|RS4E_METAC|SMALL ribosomal subunit protein eS4|Methanosarcina acetivorans (strain

Query: 1 FINTTRAGP 9
+I+TTR GP
Sbjct: 22 WISTTRPGP 30


>sp|APE1_SACS2|PROBABLE aminopeptidase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FINTTRAGP 9
F+NT GP
Sbjct: 721 FVNTVYGGP 729


>sp|RS4E_METBF|SMALL ribosomal subunit protein eS4|Methanosarcina barkeri (strain

Query: 1 FINTTRAGP 9
+++TTR GP
Sbjct: 22 WVSTTRPGP 30


>sp|DPOL_THEFM|DNA polymerase|Thermococcus fumicolans

Query: 1 FINTTRAGPG 10
++NT++ PG
Sbjct: 993 YLNTSKVKPG 1002


>sp|OFOA2_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 3 NTTRAGPG 10
+TT +GPG
Sbjct: 324 STTTSGPG 331




483|Sequence|2411|2420|RAGPGTLSVT

>sp|RF1_METJA|PEPTIDE chain release factor subunit|Methanocaldococcus jannaschii (strain

Query: 1 RAGPGT 6
R+GPGT
Sbjct: 97 RSGPGT 102


>sp|BRIX_METJA|PROBABLE Brix domain-containing ribosomal biogenesis|Methanocaldococcus

Query: 1 RAGPGTLSV 9
+A PGTL V
Sbjct: 53 KANPGTLVV 61


>sp|FOLCP_HALSA|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 2 AGPGTLSVT 10
AG GT+SVT
Sbjct: 378 AGAGTVSVT 386


>sp|GFCR2_METBF|TRANSCRIPTIONAL regulator GfcR 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 RAGPGTLS 8
RAG GT+S
Sbjct: 127 RAGKGTIS 134


>sp|AROA_THEAC|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 4 PGTLSVT 10
PGTLS T
Sbjct: 356 PGTLSYT 362




484|Sequence|2416|2425|TLSVTIEGPS

>sp|RPO3_HALMA|DNA-DIRECTED RNA polymerase subunit Rpo3|Haloarcula marismortui (strain ATCC

Query: 1 TLSVTIEGPS 10
TLS++++GPS
Sbjct: 85 TLSLSVDGPS 94


>sp|RL6_NATPD|LARGE ribosomal subunit protein uL6|Natronomonas pharaonis (strain ATCC

Query: 2 LSVTIEGPS 10
L VT+EGP+
Sbjct: 18 LEVTVEGPN 26


>sp|Y635_METJA|UNCHARACTERIZED protein MJ0635|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LSVTIEGP 9
L VT+EGP
Sbjct: 270 LIVTVEGP 277


>sp|RL6_HALWD|LARGE ribosomal subunit protein uL6|Haloquadratum walsbyi (strain DSM

Query: 2 LSVTIEGPS 10
L++T+EGP+
Sbjct: 19 LALTVEGPN 27


>sp|RPO3_PYRAB|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrococcus abyssi (strain GE5 /

Query: 1 TLSVTIEGP 9
TLS+ EGP
Sbjct: 88 TLSLEAEGP 96


>sp|RL6_HYPBU|LARGE ribosomal subunit protein uL6|Hyperthermus butylicus (strain DSM

Query: 2 LSVTIEGP 9
L VT++GP
Sbjct: 24 LKVTVKGP 31


>sp|RPO3_PYRHO|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrococcus horikoshii (strain ATCC

Query: 1 TLSVTIEGP 9
TLS+ EGP
Sbjct: 88 TLSLEAEGP 96


>sp|MTAP_THEAC|S-METHYL-5'-THIOADENOSINE phosphorylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 VTIEGP 9
+TIEGP
Sbjct: 159 ITIEGP 164


>sp|RPO3_PYRFU|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrococcus furiosus (strain ATCC

Query: 1 TLSVTIEGP 9
TLS+ EGP
Sbjct: 90 TLSLEAEGP 98


>sp|CBIHC_ARCFU|COBALAMIN biosynthesis protein CbiHC|Archaeoglobus fulgidus (strain ATCC

Query: 3 SVTIEGP 9
SVT EGP
Sbjct: 418 SVTTEGP 424




485|Sequence|2421|2430|IEGPSKVKMD

>sp|Y086_METMP|PUTATIVE transcriptional regulatory protein MMP0086|Methanococcus

Query: 3 GPSKVKMD 10
PSK+K+D
Sbjct: 62 APSKIKID 69


>sp|Y1996_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 3 GPSKVKMD 10
GP+++K+D
Sbjct: 412 GPARLKLD 419


>sp|Y1119_ARCFU|UNCHARACTERIZED protein AF_1119|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IEGPSKVKMD 10
+EGP K +D
Sbjct: 76 VEGPDKSAID 85




486|Sequence|2426|2435|KVKMDCQETP

>sp|CAPPA_CALMQ|PHOSPHOENOLPYRUVATE carboxylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 5 DCQET 9
DCQET
Sbjct: 44 DCQET 48


>sp|T2RM_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 KVKMDCQET 9
K+K +C+E+
Sbjct: 916 KIKQNCRES 924




487|Sequence|2431|2440|CQETPEGYKV

>sp|AROA_METPE|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosphaerula palustris (strain ATCC

Query: 3 ETPEGYKV 10
+TPEGY+V
Sbjct: 65 DTPEGYRV 72


>sp|DPCKG_HYPBU|GTP-DEPENDENT dephospho-CoA kinase|Hyperthermus butylicus (strain DSM 5456

Query: 1 CQETPEGYKV 10
C PEGY +
Sbjct: 78 CPSIPEGYAI 87


>sp|PELO_HYPBU|PROTEIN pelota homolog|Hyperthermus butylicus (strain DSM 5456

Query: 3 ETPEGYKV 10
E+P GYKV
Sbjct: 331 ESPVGYKV 338


>sp|Y1254_METJA|UNCHARACTERIZED protein MJ1254|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 TPEGYKV 10
TP GYK+
Sbjct: 197 TPSGYKI 203


>sp|RL23_SACS2|LARGE ribosomal subunit protein uL23|Saccharolobus solfataricus (strain

Query: 4 TPEGYK 9
TP+GYK
Sbjct: 54 TPQGYK 59


>sp|DTDA_METMJ|D-AMINOACYL-TRNA deacylase|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 PEGYKV 10
PEGY+V
Sbjct: 118 PEGYRV 123


>sp|DTDA_METLZ|D-AMINOACYL-TRNA deacylase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 5 PEGYKV 10
PEGY+V
Sbjct: 120 PEGYRV 125


>sp|DTDA_METB6|D-AMINOACYL-TRNA deacylase|Methanoregula boonei (strain DSM 21154

Query: 5 PEGYKV 10
PEGY+V
Sbjct: 116 PEGYRV 121


>sp|Y1201_ARCFU|UNCHARACTERIZED protein AF_1201|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 QETPEGYKV 10
+ET GYKV
Sbjct: 175 KETESGYKV 183


>sp|OTC_PYRHO|ORNITHINE carbamoyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 TPEGYK 9
TPEGY+
Sbjct: 186 TPEGYE 191


>sp|OTC_PYRAB|ORNITHINE carbamoyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 4 TPEGYK 9
TPEGY+
Sbjct: 186 TPEGYE 191


>sp|OTC_META3|ORNITHINE carbamoyltransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 TPEGYK 9
TPEGY+
Sbjct: 176 TPEGYE 181


>sp|OTCA_PYRFU|ORNITHINE carbamoyltransferase, anabolic|Pyrococcus furiosus (strain ATCC

Query: 4 TPEGYK 9
TPEGY+
Sbjct: 186 TPEGYE 191


>sp|SYFB_METS5|PHENYLALANINE--TRNA ligase beta subunit|Metallosphaera sedula (strain ATCC 51363

Query: 2 QETPEG 7
QETP+G
Sbjct: 174 QETPQG 179


>sp|OTC_THEKO|ORNITHINE carbamoyltransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 TPEGYK 9
TPEGY+
Sbjct: 186 TPEGYE 191


>sp|RTCB_ARCFU|TRNA-SPLICING ligase RtcB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 QETPEGYKV 10
+E PE YK+
Sbjct: 446 EEAPEAYKL 454


>sp|RTCB_NANEQ|TRNA-SPLICING ligase RtcB|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 QETPEGYK 9
+E PE YK
Sbjct: 441 EEIPEAYK 448


>sp|GLMA_THEKO|EXO-BETA-D-GLUCOSAMINIDASE kodakarensis (strain ATCC BAA-918

Query: 3 ETPEGYK 9
E PEGY+
Sbjct: 385 ENPEGYE 391


>sp|AATK_SULAC|A-TYPE ATP synthase subunit K|Sulfolobus acidocaldarius (strain ATCC

Query: 2 QETPEGY 8
Q+TP+G+
Sbjct: 26 QDTPQGF 32


>sp|Y267_ARCFU|UNCHARACTERIZED protein AF_0267|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CQETPEGY 8
C++ P GY
Sbjct: 26 CEKDPRGY 33


>sp|DTDA_METHJ|D-AMINOACYL-TRNA deacylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 PEGYKV 10
PEGY+V
Sbjct: 121 PEGYEV 126


>sp|AROE_HALWD|SHIKIMATE dehydrogenase (NADP(+))|Haloquadratum walsbyi (strain DSM 16790

Query: 3 ETPEGY 8
ETP GY
Sbjct: 93 ETPRGY 98


>sp|RS3_STAMF|SMALL ribosomal subunit protein uS3|Staphylothermus marinus (strain

Query: 3 ETPEGYKV 10
+TP GY+V
Sbjct: 40 KTPTGYRV 47


>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 4 TPEGYK 9
TPEG+K
Sbjct: 725 TPEGWK 730


>sp|MFNA_METB6|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanoregula boonei (strain

Query: 1 CQETPEGYKV 10
C PE +KV
Sbjct: 323 CDRVPEPWKV 332


>sp|RTCB_METJA|TRNA-SPLICING ligase RtcB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QETPEGYK 9
+E PE YK
Sbjct: 932 EEAPEAYK 939


>sp|MFNA_METMJ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanoculleus marisnigri

Query: 1 CQETPEGYKV 10
C+ P G++V
Sbjct: 323 CERAPVGWRV 332


>sp|TOP6A_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 2 QETPEG 7
+ETPEG
Sbjct: 156 EETPEG 161


>sp|RL18_PYRAE|LARGE ribosomal subunit protein uL18|Pyrobaculum aerophilum (strain ATCC

Query: 2 QETPEGYK 9
+E PE YK
Sbjct: 157 EENPEAYK 164


>sp|RL18_PYRCJ|LARGE ribosomal subunit protein uL18|Pyrobaculum calidifontis (strain DSM

Query: 2 QETPEGYK 9
+E PE YK
Sbjct: 157 EEAPEAYK 164


>sp|RTCB_AERPE|TRNA-SPLICING ligase RtcB|Aeropyrum pernix (strain ATCC 700893

Query: 2 QETPEGYK 9
+E PE YK
Sbjct: 445 EEMPEAYK 452


>sp|EF1B_METS5|ELONGATION factor 1-beta|Metallosphaera sedula (strain ATCC 51363

Query: 1 CQETPEGYKV 10
+ PEGYK+
Sbjct: 27 VSKLPEGYKL 36


>sp|CYAS_METPE|CYSTEATE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 TPEGYKV 10
TP GY+V
Sbjct: 398 TPAGYRV 404


>sp|TRPG_ARCFU|ANTHRANILATE synthase component 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 ETPEGYKV 10
E PEG++V
Sbjct: 125 EPPEGFEV 132


>sp|RTCB_PYRHO|TRNA-SPLICING ligase RtcB|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 TPEGY 8
TPEGY
Sbjct: 177 TPEGY 181


>sp|RTCB_PYRAB|TRNA-SPLICING ligase RtcB|Pyrococcus abyssi (strain GE5 /

Query: 4 TPEGY 8
TPEGY
Sbjct: 177 TPEGY 181


>sp|MPTA_META3|GTP cyclohydrolase MptA|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 ETPEGYKV 10
E P+GY+V
Sbjct: 207 EVPDGYEV 214


>sp|RL2_STAMF|LARGE ribosomal subunit protein uL2|Staphylothermus marinus (strain ATCC

Query: 2 QETPEGYKV 10
+ETP G KV
Sbjct: 218 RETPPGRKV 226


>sp|Y308_METJA|UNCHARACTERIZED protein MJ0308|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QETPEGY 8
+E PEGY
Sbjct: 33 EEIPEGY 39


>sp|Y900_METJA|UNCHARACTERIZED protein MJ0900|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CQETPE 6
C++TPE
Sbjct: 331 CEDTPE 336


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 4 TPEGYK 9
TPEG+K
Sbjct: 1024 TPEGWK 1029


Query: 4 TPEGY 8
TPEGY
Sbjct: 924 TPEGY 928


>sp|RL23_AERPE|LARGE ribosomal subunit protein uL23|Aeropyrum pernix (strain ATCC

Query: 4 TPEGYK 9
TP GYK
Sbjct: 59 TPRGYK 64


>sp|PIMT_IGNH4|PROTEIN-L-ISOASPARTATE O-methyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 ETPEGYKV 10
+TPEGY +
Sbjct: 189 KTPEGYVI 196




488|Sequence|2436|2445|EGYKVMYTPM

>sp|Y3685_METAC|UPF0179 protein MA_3685|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EGYKVMYTP 9
EG K+MY P
Sbjct: 90 EGAKIMYEP 98


>sp|DTDA_METHJ|D-AMINOACYL-TRNA deacylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 EGYKVMY 7
EGY+VMY
Sbjct: 122 EGYEVMY 128


>sp|NADM_ARCFU|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GYKVMYTPM 10
G+KVM+T M
Sbjct: 116 GFKVMHTKM 124


>sp|Y589_METMA|UPF0179 protein MM_0589|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EGYKVMYTP 9
+G K+MY P
Sbjct: 90 QGAKIMYEP 98


>sp|UREND_METTH|DNA uridine endonuclease|Methanothermobacter thermautotrophicus

Query: 1 EGYKVMYTP 9
EGY+ +TP
Sbjct: 54 EGYRSFFTP 62


>sp|Y292_METBF|UPF0179 protein Mbar_A0292|Methanosarcina barkeri (strain Fusaro /

Query: 1 EGYKVMYTP 9
+G K+MY P
Sbjct: 90 DGAKIMYEP 98


>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 3 YKVMYTP 9
YK+MY+P
Sbjct: 44 YKIMYSP 50


>sp|HMEB_ARCFU|HDR-LIKE menaquinol oxidoreductase integral membrane|Archaeoglobus fulgidus

Query: 1 EGYKVMYTP 9
EGY V YTP
Sbjct: 347 EGYIVSYTP 355


>sp|NADM_THESM|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Thermococcus sibiricus (strain DSM 12597

Query: 2 GYKVMYTPM 10
GYKV+ PM
Sbjct: 113 GYKVIVQPM 121


>sp|NADM_PYRFU|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GYKVMYTPM 10
GYKV+ PM
Sbjct: 115 GYKVVVQPM 123


>sp|NADM_PYRHO|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GYKVMYTPM 10
GYKV+ PM
Sbjct: 113 GYKVVVQPM 121


>sp|THSA_SACSH|CHAPERONIN subunit alpha|Saccharolobus shibatae (strain ATCC 51178

Query: 1 EGYKVMYT 8
EGYK YT
Sbjct: 122 EGYKKAYT 129


>sp|SYH_SULAC|HISTIDINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GYKVMYTPM 10
GY+ +YTP+
Sbjct: 36 GYQEVYTPI 44


>sp|GCSPB_SACI7|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 GYKVMY 7
GYKVMY
Sbjct: 189 GYKVMY 194


>sp|GCSPB_SACI6|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 GYKVMY 7
GYKVMY
Sbjct: 189 GYKVMY 194


>sp|GCSPB_SACI4|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 GYKVMY 7
GYKVMY
Sbjct: 189 GYKVMY 194


>sp|GCSPB_SACI3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 GYKVMY 7
GYKVMY
Sbjct: 189 GYKVMY 194


>sp|GCSPB_SACI2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 GYKVMY 7
GYKVMY
Sbjct: 189 GYKVMY 194


>sp|GCSPB_SACI1|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 GYKVMY 7
GYKVMY
Sbjct: 189 GYKVMY 194


>sp|NADM_PYRAB|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 GYKVMYTPM 10
GYKV+ PM
Sbjct: 113 GYKVVVQPM 121


>sp|GCSPB_SACS2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 GYKVMY 7
GYKVMY
Sbjct: 188 GYKVMY 193


>sp|Y1252_METJA|UNCHARACTERIZED protein MJ1252|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EGYKVMYT 8
EG++V+YT
Sbjct: 208 EGFEVVYT 215


>sp|DUT_METTH|PROBABLE deoxyuridine 5'-triphosphate

Query: 1 EGYKVMYTP 9
EGY ++Y P
Sbjct: 78 EGYAMLYLP 86


>sp|NADM_THEKO|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EGYKVMYTPM 10
+GY+V+ PM
Sbjct: 114 KGYEVIVQPM 123


>sp|PYCB_METJA|PYRUVATE carboxylase subunit B|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EGYKVMYTPM 10
E YK++++P+
Sbjct: 273 EKYKMLFSPI 282


>sp|Y388_METJA|UNCHARACTERIZED protein MJ0388|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GYKVMY 7
GYKV+Y
Sbjct: 100 GYKVIY 105


>sp|MCRZ_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 3 YKVMYTP 9
YK YTP
Sbjct: 3 YKAQYTP 9


>sp|Y1020_PYRFU|PUTATIVE phosphate permease PF1020|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GYKVMYT 8
GYKVM T
Sbjct: 315 GYKVMET 321


>sp|POK_THEKO|PANTOATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EGYKVMYTPM 10
E YKV+ P+
Sbjct: 172 EDYKVLVVPL 181


>sp|MCRZ_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 3 YKVMYTP 9
YK YTP
Sbjct: 3 YKAQYTP 9




489|Sequence|2441|2450|MYTPMAPGNY

>sp|HISX_HALMA|HISTIDINOL dehydrogenase|Haloarcula marismortui (strain ATCC 43049

Query: 2 YTPMAPGNY 10
Y+P+A G+Y
Sbjct: 347 YSPVAAGDY 355


>sp|OTC_PYRAE|ORNITHINE carbamoyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 MYTPMAPG 8
+YTP+ PG
Sbjct: 34 IYTPLFPG 41


>sp|OTC_PYRCJ|ORNITHINE carbamoyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 MYTPMAPG 8
+YTP+ PG
Sbjct: 34 VYTPLFPG 41


>sp|HISX_HALSA|HISTIDINOL dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 2 YTPMAPGNY 10
Y P+A G+Y
Sbjct: 348 YAPVAAGDY 356


>sp|OTC_PYRIL|ORNITHINE carbamoyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 MYTPMAPG 8
+YTP+ PG
Sbjct: 34 VYTPIFPG 41


>sp|CHEB2_METAC|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 2|Methanosarcina

Query: 5 MAPGNY 10
+APGNY
Sbjct: 237 IAPGNY 242


>sp|SLAA_METS5|S-LAYER protein A|Metallosphaera sedula (strain ATCC 51363

Query: 1 MYTPMAPGNY 10
++TP PG+Y
Sbjct: 1324 LFTPTMPGSY 1333


>sp|SEPS_METB6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoregula boonei (strain DSM 21154

Query: 1 MYTPMAPGNY 10
MY+P A G Y
Sbjct: 325 MYSPSALGEY 334


>sp|FLAH_METJA|ARCHAEAL flagellar ATP-binding protein FlaH|Methanocaldococcus jannaschii

Query: 5 MAPGNY 10
MAPG+Y
Sbjct: 206 MAPGSY 211


>sp|Y946_ARCFU|UNCHARACTERIZED protein AF_0946|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YTPMAPGNY 10
+TP PG Y
Sbjct: 244 FTPTEPGYY 252


>sp|RS4E_CALMQ|SMALL ribosomal subunit protein eS4|Caldivirga maquilingensis (strain

Query: 2 YTPMAPGNY 10
Y PM P Y
Sbjct: 170 YYPMQPNQY 178


>sp|RL10_PYRHO|LARGE ribosomal subunit protein uL10|Pyrococcus horikoshii (strain ATCC

Query: 3 TPMAPG 8
TP+APG
Sbjct: 129 TPLAPG 134


>sp|RL10_PYRAB|LARGE ribosomal subunit protein uL10|Pyrococcus abyssi (strain GE5 /

Query: 3 TPMAPG 8
TP+APG
Sbjct: 129 TPLAPG 134


>sp|UBIX_PYRHO|FLAVIN prenyltransferase UbiX|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 MYTPMAPGNY 10
++ P+A G+Y
Sbjct: 59 LFAPIASGSY 68


>sp|UBIX_PYRAB|FLAVIN prenyltransferase UbiX|Pyrococcus abyssi (strain GE5 /

Query: 1 MYTPMAPGNY 10
++ P+A G+Y
Sbjct: 59 LFAPIASGSY 68




490|Sequence|2446|2455|APGNYLISVK

>sp|NEP1_PYRCJ|RIBOSOMAL RNA small subunit methyltransferase|Pyrobaculum calidifontis

Query: 3 GNYLISVK 10
G+Y+ISVK
Sbjct: 89 GDYIISVK 96


>sp|ACSA_PYRAE|ACETYL-COENZYME A synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 APGNYLISVK 10
APG YL+ +K
Sbjct: 441 APGLYLVPMK 450


>sp|PURL_PYRNV|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 APGNYLI 7
APG+YL+
Sbjct: 185 APGDYLV 191


>sp|ACSA_PYRAR|ACETYL-COENZYME A synthetase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 APGNYLISVK 10
APG YL+ +K
Sbjct: 441 APGLYLVPMK 450


>sp|SUDHB_PYRFU|SULFIDE dehydrogenase subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GNYLISV 9
GNY+IS+
Sbjct: 124 GNYVISI 130


>sp|Y336_METJA|UNCHARACTERIZED protein MJ0336|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 APGNYLI 7
APG+Y+I
Sbjct: 80 APGDYVI 86


>sp|Y1051_METJA|UNCHARACTERIZED protein MJ1051|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GNYLIS 8
GNYLIS
Sbjct: 505 GNYLIS 510


>sp|BIOA_METJA|ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GNYLISV 9
GNYLI +
Sbjct: 39 GNYLIDI 45


>sp|RPO1N_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Sulfolobus acidocaldarius (strain ATCC

Query: 3 GNYLISVK 10
G YL+SVK
Sbjct: 505 GAYLLSVK 512




491|Sequence|2451|2460|LISVKYGGPN

>sp|ILVD_METMA|DIHYDROXY-ACID dehydratase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LISVKYGGPN 10
LIS++ GGPN
Sbjct: 300 LISLRPGGPN 309


>sp|ILVD1_METAC|DIHYDROXY-ACID dehydratase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LISVKYGGPN 10
LIS++ GGPN
Sbjct: 300 LISLRPGGPN 309


>sp|ILVD2_METAC|DIHYDROXY-ACID dehydratase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LISVKYGGPN 10
LIS++ GGPN
Sbjct: 300 LISLRPGGPN 309


>sp|ILVD_METBF|DIHYDROXY-ACID dehydratase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LISVKYGGPN 10
LIS++ GGPN
Sbjct: 300 LISLRPGGPN 309


>sp|TRMY_METMP|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 3 SVKYGGPN 10
SV YG PN
Sbjct: 54 SVNYGSPN 61


>sp|TRMY_METM6|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 3 SVKYGGPN 10
SV YG PN
Sbjct: 54 SVNYGSPN 61


>sp|TRMY_METVS|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 3 SVKYGGPN 10
SV YG PN
Sbjct: 54 SVNYGNPN 61


>sp|TRMY_META3|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus aeolicus

Query: 3 SVKYGGPN 10
SV YG PN
Sbjct: 54 SVHYGAPN 61


>sp|SYR_THEAC|ARGININE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 VKYGGP 9
+KYGGP
Sbjct: 169 IKYGGP 174


>sp|TRMY_METM7|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 3 SVKYGGPN 10
SV YG PN
Sbjct: 54 SVNYGDPN 61


>sp|MTD_METKA|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanopyrus

Query: 4 VKYGGPN 10
+ YGGPN
Sbjct: 68 IVYGGPN 74


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 ISVKYGGP 9
++VKY GP
Sbjct: 169 LAVKYAGP 176


>sp|Y1033_SACS2|KELCH domain-containing protein SSO1033|Saccharolobus solfataricus

Query: 1 LISVKYGGPN 10
L+SVKYG N
Sbjct: 417 LVSVKYGNDN 426


>sp|PURP_METM7|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain C7 /

Query: 2 ISVKYGGPN 10
I KYGGP+
Sbjct: 139 IPKKYGGPD 147


>sp|PURP_METMP|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain DSM

Query: 2 ISVKYGGPN 10
I KYGGP+
Sbjct: 139 IPKKYGGPD 147


>sp|PURP_METM6|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain C6 /

Query: 2 ISVKYGGPN 10
I KYGGP+
Sbjct: 139 IPKKYGGPD 147


>sp|FTTA_LOKSG|TRANSCRIPTION termination factor FttA|Lokiarchaeum sp. (strain GC14_75)

Query: 1 LISVKYGGPN 10
LI YGGP
Sbjct: 375 LIEATYGGPQ 384


>sp|THYX_SULAC|FLAVIN-DEPENDENT thymidylate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 KYGGPN 10
KY GPN
Sbjct: 197 KYAGPN 202


>sp|SYY_AERPE|TYROSINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 5 KYGGP 9
KYGGP
Sbjct: 299 KYGGP 303


>sp|SYW_THEAC|TRYPTOPHAN--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 KYGGP 9
KYGGP
Sbjct: 190 KYGGP 194


>sp|PURP_METM5|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus maripaludis (strain C5 /

Query: 2 ISVKYGGPN 10
I KYGGP+
Sbjct: 139 IPKKYGGPD 147


>sp|HIS1_METBU|ATP phosphoribosyltransferase|Methanococcoides burtonii (strain DSM

Query: 1 LISVKYGGPN 10
L+ +KYGG +
Sbjct: 83 LLDLKYGGAD 92


>sp|KAE1_CALMQ|TRNA N6-adenosine threonylcarbamoyltransferase|Caldivirga maquilingensis

Query: 1 LISVKYGGP 9
I++KYG P
Sbjct: 94 FIAIKYGKP 102


>sp|RNZ_THESM|RIBONUCLEASE Z|Thermococcus sibiricus (strain DSM 12597

Query: 2 ISVKYGG 8
I++KYGG
Sbjct: 23 IALKYGG 29


>sp|TRMY_METM5|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 3 SVKYGGPN 10
SV YG PN
Sbjct: 54 SVLYGPPN 61


>sp|SYP_NANEQ|PROLINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 5 KYGGPN 10
KYG PN
Sbjct: 249 KYGDPN 254


>sp|PORB_PYRAB|PYRUVATE synthase subunit PorB|Pyrococcus abyssi (strain GE5 /

Query: 5 KYGGPN 10
KYG PN
Sbjct: 44 KYGDPN 49


>sp|PORB_PYRFU|PYRUVATE synthase subunit PorB|Pyrococcus furiosus (strain ATCC 43587

Query: 5 KYGGPN 10
KYG PN
Sbjct: 44 KYGDPN 49




492|Sequence|2456|2465|YGGPNHIVGS

>sp|ENDA_THEVO|TRNA-SPLICING endonuclease|Thermoplasma volcanium (strain ATCC 51530

Query: 3 GPNHIVG 9
GPN+IVG
Sbjct: 18 GPNYIVG 24


>sp|THII_HALSA|PROBABLE tRNA sulfurtransferase|Halobacterium salinarum (strain ATCC 700922

Query: 1 YGGPNH 6
YGGP+H
Sbjct: 218 YGGPDH 223


>sp|THII_HALS3|PROBABLE tRNA sulfurtransferase|Halobacterium salinarum (strain ATCC 29341

Query: 1 YGGPNH 6
YGGP+H
Sbjct: 218 YGGPDH 223


>sp|MTD_METKA|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanopyrus

Query: 1 YGGPN 5
YGGPN
Sbjct: 70 YGGPN 74


>sp|DPHB_METAR|DIPHTHINE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 YGGPNHIV 8
+GGP HI+
Sbjct: 227 FGGPLHIM 234


>sp|MCH_HALSA|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Halobacterium salinarum (strain ATCC 700922

Query: 2 GGPNHIVGS 10
GGP H G+
Sbjct: 290 GGPTHAFGT 298


>sp|MCH_HALS3|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Halobacterium salinarum (strain ATCC 29341

Query: 2 GGPNHIVGS 10
GGP H G+
Sbjct: 290 GGPTHAFGT 298


>sp|Y679_METMA|UPF0285 protein MM_0679|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YGGPNHIVG 9
+ G NHI+G
Sbjct: 311 FAGENHILG 319


>sp|HISX_METKA|HISTIDINOL dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 3 GPNHIV 8
GPNH++
Sbjct: 367 GPNHVL 372


>sp|DPHB_METBU|DIPHTHINE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 GGPNHIV 8
GGP HIV
Sbjct: 232 GGPLHIV 238


>sp|HISX_SULTO|HISTIDINOL dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GGPNHIV 8
GPNHI+
Sbjct: 330 AGPNHIL 336


>sp|HISX_SACS2|HISTIDINOL dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GGPNHIV 8
GPNHI+
Sbjct: 334 AGPNHIL 340


>sp|SYM_METPE|METHIONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 PNHIVGS 10
P H+VGS
Sbjct: 612 PEHLVGS 618


>sp|PROF_HEILC|HEIMDALL profilin|Heimdallarchaeota archaeon (strain LC_2)

Query: 2 GGPNHIVGS 10
GG HIVG+
Sbjct: 78 GGQGHIVGA 86


>sp|SYW_AERPE|TRYPTOPHAN--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 YGGPNHIV 8
YGG H+V
Sbjct: 204 YGGYRHVV 211


>sp|SYFA_METAR|PHENYLALANINE--TRNA ligase alpha subunit|Methanocella arvoryzae (strain DSM 22066

Query: 1 YGGPNHIV 8
YGG HI+
Sbjct: 225 YGGRKHIL 232


>sp|EF2_METS3|ELONGATION factor 2|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 GPNHIVG 9
GP H VG
Sbjct: 724 GPEHYVG 730


>sp|FAU1_PYRAE|PROBABLE ribonuclease FAU-1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 YGGPNHIVGS 10
Y G N++VG+
Sbjct: 363 YDGSNNVVGT 372




493|Sequence|2461|2470|HIVGSPFKAK

>sp|MTRA2_METRM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 2|Methanobrevibacter ruminantium

Query: 1 HIVGSPFKA 9
HI G FKA
Sbjct: 84 HITGQSFKA 92


>sp|GIN23_SULAC|DNA replication complex GINS protein|Sulfolobus acidocaldarius (strain

Query: 2 IVGSPFKA 9
I+G+PF A
Sbjct: 176 IIGNPFSA 183


>sp|RNJ_HALSA|RIBONUCLEASE J|Halobacterium salinarum (strain ATCC 700922

Query: 2 IVGSPF 7
IVGSPF
Sbjct: 101 IVGSPF 106


>sp|MTRA_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanocaldococcus jannaschii

Query: 1 HIVGSPFKA 9
HI G FKA
Sbjct: 85 HITGQCFKA 93


>sp|CDPAS_METKA|CDP-ARCHAEOL synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 IVGSPFKA 9
+VG P+KA
Sbjct: 77 VVGDPWKA 84


>sp|MTRA_METV3|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanococcus voltae (strain ATCC

Query: 1 HIVGSPFKA 9
HI G FKA
Sbjct: 85 HITGQCFKA 93


>sp|RLME_METTH|RIBOSOMAL RNA large subunit methyltransferase|Methanothermobacter

Query: 1 HIVGSPFKAK 10
+IVG FK K
Sbjct: 194 YIVGRDFKGK 203


>sp|MTRA_META3|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanococcus aeolicus (strain ATCC

Query: 1 HIVGSPFKA 9
HI G FKA
Sbjct: 85 HITGQCFKA 93




494|Sequence|2466|2475|PFKAKVTGQR

>sp|DCD_METS5|DCTP deaminase|Metallosphaera sedula (strain ATCC 51363

Query: 1 PFKAKVTGQR 10
P+K K GQR
Sbjct: 154 PYKGKYQGQR 163


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 1 PFKAKVTG 8
PF +KVTG
Sbjct: 852 PFTSKVTG 859


>sp|CARB_METMJ|CARBAMOYL phosphate synthase large chain|Methanoculleus marisnigri (strain

Query: 1 PFKAKVTG 8
PF AK TG
Sbjct: 834 PFVAKATG 841


>sp|SYV_PYRAE|VALINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 FKAKVTGQR 10
FK K++G R
Sbjct: 27 FKTKISGSR 35


>sp|SYG_METKA|GLYCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 KAKVTGQR 10
K KVTG+R
Sbjct: 418 KEKVTGER 425


>sp|AATB3_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 KAKVTGQ 9
+AKVTGQ
Sbjct: 171 QAKVTGQ 177




495|Sequence|2471|2480|VTGQRLVSPG

>sp|RS4_PYRAE|SMALL ribosomal subunit protein uS4|Pyrobaculum aerophilum (strain ATCC

Query: 1 VTGQRLVSPG 10
V G+R+ SPG
Sbjct: 135 VAGRRVTSPG 144


>sp|RS4_PYRIL|SMALL ribosomal subunit protein uS4|Pyrobaculum islandicum (strain DSM

Query: 1 VTGQRLVSPG 10
V G+R+ SPG
Sbjct: 135 VAGRRVTSPG 144


>sp|RS4_PYRCJ|SMALL ribosomal subunit protein uS4|Pyrobaculum calidifontis (strain DSM

Query: 1 VTGQRLVSPG 10
V G+R+ SPG
Sbjct: 135 VAGRRVTSPG 144


>sp|RS4_STAMF|SMALL ribosomal subunit protein uS4|Staphylothermus marinus (strain ATCC

Query: 1 VTGQRLVSPG 10
+ G+R+ SPG
Sbjct: 132 IAGRRITSPG 141


>sp|RS4_IGNH4|SMALL ribosomal subunit protein uS4|Ignicoccus hospitalis (strain KIN4/I

Query: 1 VTGQRLVSPG 10
+ G+R+ SPG
Sbjct: 132 INGRRVTSPG 141


>sp|RS4_SACI7|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 1 VTGQRLVSPG 10
V G+R+ SPG
Sbjct: 133 VNGKRVTSPG 142


>sp|RS4_SACI6|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 1 VTGQRLVSPG 10
V G+R+ SPG
Sbjct: 133 VNGKRVTSPG 142


>sp|RS4_SACI4|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 1 VTGQRLVSPG 10
V G+R+ SPG
Sbjct: 133 VNGKRVTSPG 142


>sp|RS4_SACI3|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 1 VTGQRLVSPG 10
V G+R+ SPG
Sbjct: 133 VNGKRVTSPG 142


>sp|RS4_SACI2|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 1 VTGQRLVSPG 10
V G+R+ SPG
Sbjct: 133 VNGKRVTSPG 142


>sp|RS4_SACI1|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 1 VTGQRLVSPG 10
V G+R+ SPG
Sbjct: 133 VNGKRVTSPG 142


>sp|RS4_SACS2|SMALL ribosomal subunit protein uS4|Saccharolobus solfataricus (strain

Query: 1 VTGQRLVSPG 10
V G+R+ SPG
Sbjct: 133 VNGKRVTSPG 142


>sp|RS4_PYRNV|SMALL ribosomal subunit protein uS4|Pyrobaculum neutrophilum (strain DSM

Query: 1 VTGQRLVSPG 10
V G+R+ SPG
Sbjct: 135 VAGRRVSSPG 144


>sp|RS4_AERPE|SMALL ribosomal subunit protein uS4|Aeropyrum pernix (strain ATCC 700893

Query: 1 VTGQRLVSPG 10
+ G+R+ SPG
Sbjct: 133 IAGRRVTSPG 142


>sp|RS4_PYRAR|SMALL ribosomal subunit protein uS4|Pyrobaculum arsenaticum (strain DSM

Query: 1 VTGQRLVSPG 10
+ G+R+ SPG
Sbjct: 135 IEGRRVTSPG 144


>sp|CSG1_HALHT|CELL surface glycoprotein 1|Haloarcula hispanica (strain ATCC 33960

Query: 1 VTGQRLVSPG 10
VTG+ V+PG
Sbjct: 662 VTGETNVAPG 671


>sp|RS4_SULTO|SMALL ribosomal subunit protein uS4|Sulfurisphaera tokodaii (strain DSM

Query: 1 VTGQRLVSPG 10
+ G+R+ SPG
Sbjct: 133 IGGRRVTSPG 142




496|Sequence|2476|2485|LVSPGSANET

>sp|Y730_METJA|UNCHARACTERIZED protein MJ0730|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LVSPGSANET 10
LV+P +AN T
Sbjct: 85 LVAPATANTT 94


>sp|SMC_THEAC|CHROMOSOME partition protein Smc|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LVSPGSANE 9
LVS GS NE
Sbjct: 66 LVSKGSGNE 74


>sp|MPTD_METKA|DIHYDRONEOPTERIN aldolase|Methanopyrus kandleri (strain AV19 /

Query: 2 VSPGSANE 9
VSPG+A E
Sbjct: 33 VSPGTAEE 40




497|Sequence|2481|2490|SANETSSILV

>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 1 SANETSSILV 10
+ANET++I+V
Sbjct: 1235 TANETATIVV 1244




498|Sequence|2486|2495|SSILVESVTR

***** No hits found ******


499|Sequence|2491|2500|ESVTRSSTET

>sp|TRPB_DESA1|TRYPTOPHAN synthase beta chain|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 ESVTRSSTET 10
ESV R STET
Sbjct: 125 ESVERVSTET 134




500|Sequence|2496|2505|SSTETCYSAI

>sp|Y903_METJA|UNCHARACTERIZED protein MJ0903|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 STETCYS 8
+TE CYS
Sbjct: 146 NTEVCYS 152




501|Sequence|2501|2510|CYSAIPKASS

***** No hits found ******


502|Sequence|2506|2515|PKASSDASKV

>sp|RL11_KORCO|LARGE ribosomal subunit protein uL11|Korarchaeum cryptofilum (strain

Query: 2 KASSDASK 9
K SSDASK
Sbjct: 85 KGSSDASK 92


>sp|SYG_PYRHO|GLYCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PKASSDASKV 10
PK +DA K+
Sbjct: 373 PKLKADAKKI 382




503|Sequence|2511|2520|DASKVTSKGA

>sp|SECG_PYRFU|PREPROTEIN translocase subunit SecG|Pyrococcus furiosus (strain ATCC 43587

Query: 2 ASKVTSKGA 10
A KVT KGA
Sbjct: 25 AVKVTPKGA 33




504|Sequence|2516|2525|TSKGAGLSKA

>sp|DNLI_SULTO|DNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 SKGAGLS 8
SKGAGLS
Sbjct: 550 SKGAGLS 556


>sp|RS24_AERPE|SMALL ribosomal subunit protein eS24|Aeropyrum pernix (strain ATCC

Query: 1 TSKGAGLSK 9
T GAGLSK
Sbjct: 75 TGYGAGLSK 83


>sp|PGP_PYRAB|PHOSPHOGLYCOLATE phosphatase|Pyrococcus abyssi (strain GE5 /

Query: 2 SKGAGLSKA 10
+KGAG+ KA
Sbjct: 153 NKGAGIEKA 161


>sp|ILVC_METVS|KETOL-ACID reductoisomerase (NADP(+))|Methanococcus vannielii (strain ATCC

Query: 2 SKGAGLSKA 10
+KG GLS+A
Sbjct: 168 AKGIGLSRA 176




505|Sequence|2521|2530|GLSKAFVGQK

>sp|Y1725_METS5|PUTATIVE HTH-type transcriptional regulatory protein|Metallosphaera sedula

Query: 1 GLSKAFVGQK 10
GL+KA G+K
Sbjct: 97 GLAKALRGEK 106




506|Sequence|2526|2535|FVGQKSSFLV

>sp|DGGGP_METTP|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 FVGQKSSFLV 10
F+G++ SF++
Sbjct: 190 FIGKRKSFVL 199




507|Sequence|2531|2540|SSFLVDCSKA

>sp|THYX_PYRAE|FLAVIN-DEPENDENT thymidylate synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 SSFLVDCSKA 10
+ FLV+CS+A
Sbjct: 67 AQFLVECSRA 76


>sp|COFC_METMA|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SSFLVDCSKA 10
SSFL CS A
Sbjct: 141 SSFLTHCSIA 150


>sp|COFC_METAC|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SSFLVDCSKA 10
SSFL CS A
Sbjct: 141 SSFLTHCSIA 150


>sp|PSTK_METMP|L-SERYL-TRNA(SEC) kinase|Methanococcus maripaludis (strain DSM 14266

Query: 2 SFLVDCSK 9
SFL DC K
Sbjct: 224 SFLKDCKK 231


>sp|COFC_METBF|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 SSFLVDCSKA 10
SSFL CS A
Sbjct: 141 SSFLTHCSIA 150




508|Sequence|2536|2545|DCSKAGSNML

>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 2 CSKAGSNML 10
C K GSN++
Sbjct: 1071 CPKCGSNLI 1079


>sp|Y2267_ARCFU|PUTATIVE NADH dehydrogenase/NAD(P)H nitroreductase AF_2267|Archaeoglobus

Query: 1 DCSKAGSNML 10
DCS A N+L
Sbjct: 96 DCSAATENIL 105


>sp|Y120_METTH|PUTATIVE NADH dehydrogenase/NAD(P)H nitroreductase|Methanothermobacter

Query: 1 DCSKAGSNML 10
DCS A N+L
Sbjct: 116 DCSIASQNIL 125


>sp|IDI2_METTP|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 DCSKAGSNML 10
+CS+AG+ ++
Sbjct: 254 ECSRAGAQVI 263


>sp|Y157_METAC|UPF0251 protein MA_0157|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 CSKAGSNML 10
C K GS+M+
Sbjct: 154 CEKCGSSMV 162


>sp|THIE_METAR|THIAMINE-PHOSPHATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 DCSKAG 6
DC+KAG
Sbjct: 56 DCNKAG 61




509|Sequence|2541|2550|GSNMLLIGVH

>sp|GGGPS_KORCO|GERANYLGERANYLGLYCERYL phosphate synthase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 GSNMLLIGVH 10
G+N++++G H
Sbjct: 215 GANVIVVGTH 224


>sp|HEM1_METJA|GLUTAMYL-TRNA reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GSNMLLIG 8
G N+LLIG
Sbjct: 158 GKNVLLIG 165


>sp|RNZ_METVS|RIBONUCLEASE Z|Methanococcus vannielii (strain ATCC 35089

Query: 3 NMLLIGVH 10
NML IG H
Sbjct: 99 NMLKIGYH 106


>sp|PCNA_METMA|DNA polymerase sliding clamp|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GSNMLLIGV 9
GSN LLI V
Sbjct: 93 GSNKLLIDV 101


>sp|PCNA_METAC|DNA polymerase sliding clamp|Methanosarcina acetivorans (strain ATCC

Query: 1 GSNMLLIGV 9
GSN LLI V
Sbjct: 93 GSNKLLIDV 101


>sp|RRP41_NITMS|EXOSOME complex component Rrp41|Nitrosopumilus maritimus (strain SCM1)

Query: 1 GSNMLLIGV 9
G N +L+GV
Sbjct: 48 GDNKILVGV 56


>sp|RRP41_THEAC|EXOSOME complex component Rrp41|Thermoplasma acidophilum (strain ATCC

Query: 1 GSNMLLIGVH 10
G N +++GV+
Sbjct: 49 GGNKIMVGVY 58




510|Sequence|2546|2555|LIGVHGPTTP

>sp|DHE4_PYRCJ|NADP(+)-DEPENDENT glutamate dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 GVHGPTTP 10
G +GPTTP
Sbjct: 320 GANGPTTP 327


>sp|DHE2_PYRCJ|NAD(+)-DEPENDENT glutamate dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 GVHGPTTP 10
G +GPTTP
Sbjct: 323 GANGPTTP 330


>sp|SYR_METTH|ARGININE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 LIGVHGPTT 9
L+G+H P T
Sbjct: 551 LLGIHAPET 559


>sp|MSRA_SULAC|PEPTIDE methionine sulfoxide reductase MsrA|Sulfolobus acidocaldarius

Query: 4 VHGPTTP 10
+H PTTP
Sbjct: 76 IHDPTTP 82


>sp|DTDA_AERPE|D-AMINOACYL-TRNA deacylase|Aeropyrum pernix (strain ATCC 700893

Query: 5 HGPTTP 10
HGPTTP
Sbjct: 143 HGPTTP 148


>sp|TREZ_SACSO|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (Sulfolobus

Query: 3 GVHGPT 8
GVHGP+
Sbjct: 78 GVHGPS 83


>sp|MSRA_METMP|PEPTIDE methionine sulfoxide reductase MsrA|Methanococcus maripaludis

Query: 5 HGPTTP 10
H PTTP
Sbjct: 80 HNPTTP 85


>sp|MSRA_METM7|PEPTIDE methionine sulfoxide reductase MsrA|Methanococcus maripaludis

Query: 5 HGPTTP 10
H PTTP
Sbjct: 80 HDPTTP 85


>sp|MSRA_METM6|PEPTIDE methionine sulfoxide reductase MsrA|Methanococcus maripaludis

Query: 5 HGPTTP 10
H PTTP
Sbjct: 80 HDPTTP 85


>sp|MSRA_METM5|PEPTIDE methionine sulfoxide reductase MsrA|Methanococcus maripaludis

Query: 5 HGPTTP 10
H PTTP
Sbjct: 80 HDPTTP 85


>sp|RFCS_HALWD|REPLICATION factor C small subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LIGVHGPT 8
LIG H PT
Sbjct: 234 LIGAHTPT 241


>sp|DHE3_THELN|GLUTAMATE dehydrogenase|Thermococcus litoralis (strain ATCC 51850

Query: 5 HGPTTP 10
+GPTTP
Sbjct: 319 NGPTTP 324


>sp|CETZ_THEKO|TUBULIN-LIKE protein CetZ|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LIGVHGP 7
L+ +HGP
Sbjct: 260 LVAIHGP 266


>sp|CETZ_PYRHO|TUBULIN-LIKE protein CetZ|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LIGVHGP 7
L+ +HGP
Sbjct: 260 LVAIHGP 266


>sp|CETZ_PYRFU|TUBULIN-LIKE protein CetZ|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LIGVHGP 7
L+ +HGP
Sbjct: 260 LVAIHGP 266


>sp|CETZ_PYRAB|TUBULIN-LIKE protein CetZ|Pyrococcus abyssi (strain GE5 /

Query: 1 LIGVHGP 7
L+ +HGP
Sbjct: 260 LVAIHGP 266


>sp|RF12_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 1 LIGVHGPT 8
LIG H PT
Sbjct: 220 LIGGHSPT 227


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 5 HGPTTP 10
H PTTP
Sbjct: 682 HKPTTP 687


>sp|Y1940_AERPE|UNCHARACTERIZED protein APE_1940.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 LIGVHGPTTP 10
++G+H P P
Sbjct: 163 ILGIHEPLAP 172


>sp|RRP41_THEAC|EXOSOME complex component Rrp41|Thermoplasma acidophilum (strain ATCC

Query: 1 LIGVHGP 7
++GV+GP
Sbjct: 54 MVGVYGP 60


>sp|HDRA1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina acetivorans

Query: 1 LIGVHGPT 8
++G++GPT
Sbjct: 365 VLGINGPT 372


>sp|TRMY_HALMA|TRNA (pseudouridine(54)-N(1))-methyltransferase|Haloarcula marismortui

Query: 1 LIGVHGPTTP 10
+IG PTTP
Sbjct: 6 IIGHDAPTTP 15


>sp|GLNB1_METTH|NITROGEN regulatory protein P-II 1|Methanothermobacter thermautotrophicus

Query: 1 LIGVHGPT 8
L+G+HG T
Sbjct: 25 LMGIHGMT 32


>sp|TRPD_NATPD|ANTHRANILATE phosphoribosyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 IGVHGPTT 9
IGVHG +T
Sbjct: 224 IGVHGEST 231


>sp|RRP41_THEVO|EXOSOME complex component Rrp41|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LIGVHGP 7
++GV+GP
Sbjct: 54 IVGVYGP 60


>sp|SYP_PICTO|PROLINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 LIGVHGPTT 9
+IG+HG T
Sbjct: 264 VIGIHGDDT 272


>sp|RS11_METKA|SMALL ribosomal subunit protein uS11|Methanopyrus kandleri (strain AV19

Query: 3 GVHGPTTP 10
G HGP TP
Sbjct: 87 GGHGPKTP 94


>sp|MDH_METTH|MALATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LIGVHGP 7
+IG HGP
Sbjct: 173 VIGQHGP 179


>sp|RS11_HYPBU|SMALL ribosomal subunit protein uS11|Hyperthermus butylicus (strain DSM

Query: 3 GVHGPTTP 10
G HGP TP
Sbjct: 83 GGHGPKTP 90


>sp|RS11_STAMF|SMALL ribosomal subunit protein uS11|Staphylothermus marinus (strain

Query: 3 GVHGPTTP 10
G HGP TP
Sbjct: 83 GGHGPKTP 90


>sp|RS11_AERPE|SMALL ribosomal subunit protein uS11|Aeropyrum pernix (strain ATCC

Query: 3 GVHGPTTP 10
G HGP TP
Sbjct: 83 GGHGPKTP 90


>sp|MDH_METTM|MALATE dehydrogenase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 LIGVHGP 7
+IG HGP
Sbjct: 173 VIGQHGP 179


>sp|CAS8B_HALVD|CRISPR-ASSOCIATED protein Cas8b|Haloferax volcanii (strain ATCC 29605

Query: 4 VHGPT 8
VHGPT
Sbjct: 415 VHGPT 419


>sp|Y121_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 LIGVHGPT 8
++GV GPT
Sbjct: 31 IVGVVGPT 38


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 LIGVHGPTTP 10
LIG H TTP
Sbjct: 3894 LIGDHQSTTP 3903


Query: 1 LIGVHGPTTP 10
LIG H TTP
Sbjct: 4537 LIGDHQSTTP 4546


>sp|GCSPB_HALSA|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Halobacterium

Query: 3 GVHGPTT 9
GVH PTT
Sbjct: 397 GVHPPTT 403




511|Sequence|2551|2560|GPTTPCEEVS

>sp|RNZ_PYRHO|RIBONUCLEASE Z|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GPTTPCEEV 9
G T PC+EV
Sbjct: 207 GDTEPCDEV 215


>sp|RNZ_THEKO|RIBONUCLEASE Z|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GPTTPCEEV 9
G T PCE V
Sbjct: 206 GDTEPCERV 214


>sp|RNZ_THEGJ|RIBONUCLEASE Z|Thermococcus gammatolerans (strain DSM 15229

Query: 1 GPTTPCEEV 9
G T PCE V
Sbjct: 206 GDTEPCERV 214


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GPTTPCEEVS 10
GP P EEV+
Sbjct: 664 GPVLPIEEVA 673


>sp|NIFK_METBA|NITROGENASE molybdenum-iron protein beta chain|Methanosarcina barkeri

Query: 4 TPCEEVS 10
TPCEEV+
Sbjct: 5 TPCEEVT 11


>sp|RNZ_PYRAB|RIBONUCLEASE Z|Pyrococcus abyssi (strain GE5 /

Query: 1 GPTTPCEEV 9
G T PCE V
Sbjct: 207 GDTEPCENV 215


>sp|RNZ_METS5|RIBONUCLEASE Z|Metallosphaera sedula (strain ATCC 51363

Query: 1 GPTTPCEEV 9
G T PCE V
Sbjct: 199 GDTRPCETV 207


>sp|RNZ_IGNH4|RIBONUCLEASE Z|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GPTTPCEEV 9
G T PCE +
Sbjct: 206 GDTAPCERL 214


>sp|RNZ_SULAC|RIBONUCLEASE Z|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GPTTPCEEV 9
G T PC+ V
Sbjct: 199 GDTAPCDSV 207


>sp|RNZ_SACS2|RIBONUCLEASE Z|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GPTTPCEEV 9
G T PC+ V
Sbjct: 200 GDTMPCQSV 208


>sp|RNZ_SACI7|RIBONUCLEASE Z|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 GPTTPCEEV 9
G T PC+ V
Sbjct: 200 GDTIPCQSV 208


>sp|RNZ_SACI6|RIBONUCLEASE Z|Saccharolobus islandicus (strain M.16.4 /

Query: 1 GPTTPCEEV 9
G T PC+ V
Sbjct: 200 GDTIPCQSV 208


>sp|RNZ_SACI4|RIBONUCLEASE Z|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GPTTPCEEV 9
G T PC+ V
Sbjct: 200 GDTIPCQSV 208


>sp|RNZ_SACI3|RIBONUCLEASE Z|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 GPTTPCEEV 9
G T PC+ V
Sbjct: 200 GDTIPCQSV 208


>sp|RNZ_SACI2|RIBONUCLEASE Z|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 GPTTPCEEV 9
G T PC+ V
Sbjct: 200 GDTIPCQSV 208


>sp|RNZ_SACI1|RIBONUCLEASE Z|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 GPTTPCEEV 9
G T PC+ V
Sbjct: 200 GDTIPCQSV 208


>sp|RNZ_METTH|RIBONUCLEASE Z|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GPTTPCEEV 9
G T PCE V
Sbjct: 206 GDTRPCESV 214


>sp|KATG_METAC|CATALASE-PEROXIDASE acetivorans (strain ATCC 35395

Query: 1 GPTTPCEEV 9
GP P EE+
Sbjct: 424 GPEVPAEEL 432


>sp|RNZ_THEON|RIBONUCLEASE Z|Thermococcus onnurineus (strain NA1)

Query: 1 GPTTPCE 7
G T PCE
Sbjct: 206 GDTEPCE 212


>sp|RNZ_METMA|RIBONUCLEASE Z|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GPTTPCEEV 9
G T PCE V
Sbjct: 207 GDTRPCEAV 215


>sp|RNZ_METAC|RIBONUCLEASE Z|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GPTTPCEEV 9
G T PCE V
Sbjct: 207 GDTRPCEAV 215


>sp|CYAS_METAR|CYSTEATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 GPTTPCEEV 9
GP P EE+
Sbjct: 404 GPDVPMEEI 412


>sp|DEOC_HALWD|DEOXYRIBOSE-PHOSPHATE aldolase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GPTTPCEEVS 10
GPTT +EV+
Sbjct: 16 GPTTTMDEVT 25


>sp|ENO_METST|ENOLASE stadtmanae (strain ATCC 43021

Query: 4 TPCEEVS 10
T CEEVS
Sbjct: 218 TSCEEVS 224




512|Sequence|2556|2565|CEEVSMKHVG

>sp|QUEC_METST|7-CYANO-7-DEAZAGUANINE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 CEEVSMKHV 9
CE++ MKH+
Sbjct: 51 CEKLDMKHI 59


>sp|GATA_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 2 EEVSMKHV 9
EEVSM H+
Sbjct: 284 EEVSMPHI 291


>sp|GATA_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina mazei (strain ATCC

Query: 2 EEVSMKHV 9
EEVSM H+
Sbjct: 285 EEVSMPHI 292


>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 CEEVSMKHV 9
C+E ++KHV
Sbjct: 124 CKEFALKHV 132


>sp|CBIA_METBF|COBYRINATE a,c-diamide synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 EVSMKHVG 10
++SM+H+G
Sbjct: 197 QISMRHLG 204


>sp|CBIA_METAC|COBYRINATE a,c-diamide synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 EVSMKHVG 10
++SM+H+G
Sbjct: 200 QISMRHLG 207


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 CEEVSMKHVG 10
C+E ++ H+G
Sbjct: 119 CKEFALNHLG 128


>sp|ARGB_METHJ|ACETYLGLUTAMATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 EEVSMKHVG 10
EEV + HVG
Sbjct: 143 EEVDLGHVG 151


>sp|ILVD_METS3|DIHYDROXY-ACID dehydratase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 CEEVSMKHVG 10
C+ +SM H G
Sbjct: 77 CDGISMNHEG 86


>sp|SPCS_METKA|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanopyrus kandleri (strain AV19 /

Query: 1 CEEVSMKHV 9
CEE + HV
Sbjct: 227 CEEYGVPHV 235


>sp|HMDH_PYRAB|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Pyrococcus abyssi (strain GE5 /

Query: 4 VSMKHVG 10
+S+KH+G
Sbjct: 45 ISLKHIG 51


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CEEVSMKH 8
C+E ++KH
Sbjct: 119 CKEFALKH 126




513|Sequence|2561|2570|MKHVGNQQYN

>sp|SLAB_ACIAM|S-LAYER protein B|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 3 HVGNQQYN 10
++GN QYN
Sbjct: 308 YIGNGQYN 315


>sp|MRE11_ARCFU|DNA double-strand break repair protein|Archaeoglobus fulgidus (strain

Query: 3 HVGNQQYN 10
H+G +QYN
Sbjct: 10 HLGYEQYN 17


>sp|MFNA_METAC|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosarcina acetivorans

Query: 1 MKHVGNQQY 9
MK++GN+ Y
Sbjct: 295 MKYLGNEGY 303


>sp|MFNA_METS3|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanobrevibacter smithii

Query: 1 MKHVGNQQY 9
MK++GN+ Y
Sbjct: 287 MKYLGNEGY 295


>sp|MRE11_SULTO|DNA double-strand break repair protein|Sulfurisphaera tokodaii

Query: 3 HVGNQQYN 10
H+G +QYN
Sbjct: 13 HLGKRQYN 20


>sp|MRE11_HALVD|DNA double-strand break repair protein|Haloferax volcanii (strain

Query: 3 HVGNQQYN 10
H+G QQY+
Sbjct: 11 HLGYQQYH 18


>sp|MRE11_HALSA|DNA double-strand break repair protein|Halobacterium salinarum

Query: 3 HVGNQQYN 10
H+G QQY+
Sbjct: 11 HLGYQQYH 18


>sp|GSA_METS5|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Metallosphaera sedula (strain ATCC 51363

Query: 1 MKHVGNQQYN 10
M HV N+ YN
Sbjct: 335 MDHVVNRVYN 344


>sp|DP2S_ARCFU|DNA polymerase II small subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 MKHVGNQQY 9
++HVGN Y
Sbjct: 349 VEHVGNPAY 357


>sp|MRE11_SULAC|DNA double-strand break repair protein|Sulfolobus acidocaldarius

Query: 3 HVGNQQYN 10
H+G +QYN
Sbjct: 10 HLGKRQYN 17


>sp|MRE11_METJA|DNA double-strand break repair protein|Methanocaldococcus jannaschii

Query: 3 HVGNQQYN 10
H+G +QYN
Sbjct: 10 HLGYRQYN 17




514|Sequence|2566|2575|NQQYNVTYVV

>sp|RIBB_METLZ|3,4-DIHYDROXY-2-BUTANONE 4-phosphate synthase|Methanocorpusculum labreanum (strain ATCC

Query: 2 QQYNVTYV 9
+QYN+T+V
Sbjct: 183 KQYNLTFV 190


>sp|Y1196_METJA|PUTATIVE amino-acid transporter MJ1196|Methanocaldococcus jannaschii (strain

Query: 1 NQQYNVTYV 9
N ++NV+YV
Sbjct: 108 NTKFNVSYV 116


>sp|ACTH_THEVO|ARCHAEAL actin homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 2 QQYNVTYVV 10
+QYNVT ++
Sbjct: 139 RQYNVTRLI 147


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 3 QYNVTYVV 10
QYNVTY V
Sbjct: 325 QYNVTYDV 332




515|Sequence|2571|2580|VTYVVKERGD

>sp|NPD_THEKO|NAD-DEPENDENT protein deacylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VTYVVKERG 9
V Y+VKERG
Sbjct: 202 VPYIVKERG 210


>sp|MUTL_HALSA|DNA mismatch repair protein MutL|Halobacterium salinarum (strain ATCC

Query: 2 TYVVKERGD 10
TYVV E GD
Sbjct: 470 TYVVAEAGD 478


>sp|MUTL_HALS3|DNA mismatch repair protein MutL|Halobacterium salinarum (strain ATCC

Query: 2 TYVVKERGD 10
TYVV E GD
Sbjct: 470 TYVVAEAGD 478


>sp|MUTL_METLZ|DNA mismatch repair protein MutL|Methanocorpusculum labreanum (strain

Query: 1 VTYVVKERG 9
VT+ KERG
Sbjct: 111 VTFTTKERG 119


>sp|CSG_METVS|S-LAYER protein|Methanococcus vannielii (strain ATCC 35089

Query: 4 VVKERGD 10
VVK+RGD
Sbjct: 275 VVKQRGD 281


>sp|TMCA_THES3|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus sp. (strain AM4)

Query: 3 YVVKERG 9
YVV+ERG
Sbjct: 343 YVVEERG 349


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 YVVKERGD 10
Y++KE+G+
Sbjct: 846 YIIKEQGN 853


>sp|RIFK_THEPD|RIBOFLAVIN kinase|Thermofilum pendens (strain DSM 2475

Query: 1 VTYVVKERG 9
V YVV ERG
Sbjct: 64 VFYVVTERG 72


>sp|SAHH_SACS2|ADENOSYLHOMOCYSTEINASE solfataricus (strain ATCC 35092

Query: 1 VTYVVKERG 9
V Y+VK RG
Sbjct: 362 VEYLVKNRG 370


>sp|HISX_SULAC|HISTIDINOL dehydrogenase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 VKERGD 10
VKERGD
Sbjct: 28 VKERGD 33


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YVVKERGD 10
Y++KE+G+
Sbjct: 850 YIIKEQGN 857




516|Sequence|2576|2585|KERGDYVLAV

>sp|Y273_METJA|UNCHARACTERIZED protein MJ0273|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KERGDYVLA 9
KERGDYV A
Sbjct: 62 KERGDYVTA 70


>sp|AROB_SULAC|3-DEHYDROQUINATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 ERGDYVLAV 10
+RGDYV+A+
Sbjct: 84 DRGDYVIAI 92


>sp|AROB_SULTO|3-DEHYDROQUINATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 ERGDYVLAV 10
+RGDYV+A+
Sbjct: 83 DRGDYVIAL 91


>sp|RPA_METJA|REPLICATION factor A|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KERGDYV 7
KERGDY+
Sbjct: 471 KERGDYI 477


>sp|SUDHB_PYRFU|SULFIDE dehydrogenase subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KERGDYVLAV 10
KE+G+YV+++
Sbjct: 121 KEKGNYVISI 130


Query: 2 ERGDYVLAV 10
E GDY+L V
Sbjct: 77 EAGDYILDV 85


>sp|RS25_PYRAE|SMALL ribosomal subunit protein eS25|Pyrobaculum aerophilum (strain

Query: 1 KERGDYVL 8
KERGD VL
Sbjct: 87 KERGDLVL 94


>sp|AROB_SACS2|3-DEHYDROQUINATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 ERGDYVLAV 10
+RGDY++ V
Sbjct: 84 DRGDYIIGV 92


>sp|TF2B_METKA|TRANSCRIPTION initiation factor IIB|Methanopyrus kandleri (strain AV19 /

Query: 1 KERGDYVLA 9
+ERG+YV A
Sbjct: 27 EERGEYVCA 35


>sp|RL3_METBF|LARGE ribosomal subunit protein uL3|Methanosarcina barkeri (strain Fusaro

Query: 3 RGDYVL 8
RGDYVL
Sbjct: 291 RGDYVL 296


>sp|RL3_METMA|LARGE ribosomal subunit protein uL3|Methanosarcina mazei (strain ATCC

Query: 3 RGDYVL 8
RGDYVL
Sbjct: 291 RGDYVL 296


>sp|AROB_PYRCJ|3-DEHYDROQUINATE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 KERGDYVL 8
K RG+YVL
Sbjct: 303 KRRGEYVL 310


>sp|G1PDH_AERPE|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Aeropyrum pernix (strain ATCC 700893

Query: 2 ERGDYVLAV 10
+RG YVL V
Sbjct: 33 QRGSYVLVV 41


>sp|NDK_METLZ|NUCLEOSIDE diphosphate kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 RGDYVLAV 10
RGDY L++
Sbjct: 102 RGDYALSI 109


>sp|IDI2_IGNH4|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 KERGDYVLAV 10
+E+GD VLA
Sbjct: 230 REKGDEVLAT 239


>sp|Y1010_METJA|UNCHARACTERIZED ATP-binding protein MJ1010|Methanocaldococcus jannaschii (strain

Query: 1 KERGDYVL 8
KER DY+L
Sbjct: 215 KERVDYIL 222


>sp|RL3_METAC|LARGE ribosomal subunit protein uL3|Methanosarcina acetivorans (strain

Query: 3 RGDYVL 8
RGDY+L
Sbjct: 291 RGDYIL 296


>sp|Y3527_METJA|UNCHARACTERIZED protein MJECL27|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KERGDYVL 8
+ER DYVL
Sbjct: 97 QERKDYVL 104


>sp|NEP1_PYRNV|RIBOSOMAL RNA small subunit methyltransferase|Pyrobaculum neutrophilum

Query: 3 RGDYVLAV 10
RGDY++ V
Sbjct: 88 RGDYIIQV 95


>sp|GLCD3_SACS2|GLUCOSE 1-dehydrogenase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 RGDYVLAV 10
+GDYV+++
Sbjct: 85 KGDYVVSI 92


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 ERGDYVLAV 10
+ GDYVL +
Sbjct: 428 QEGDYVLGI 436


>sp|Y906_METJA|UNCHARACTERIZED protein MJ0906|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ERGDYVLAV 10
++GDY+L V
Sbjct: 201 DKGDYILDV 209


>sp|RUXX_THESM|PUTATIVE snRNP Sm-like protein|Thermococcus sibiricus (strain DSM 12597

Query: 3 RGDYVLAV 10
RGD VLA+
Sbjct: 63 RGDNVLAI 70


>sp|FAU1_METKA|PROBABLE ribonuclease FAU-1|Methanopyrus kandleri (strain AV19 /

Query: 2 ERGDYVLAV 10
E+GDY +++
Sbjct: 370 EKGDYAISI 378


>sp|RUXX_PYRFU|PUTATIVE snRNP Sm-like protein|Pyrococcus furiosus (strain ATCC 43587

Query: 3 RGDYVLAV 10
RGD VLA+
Sbjct: 63 RGDNVLAI 70


>sp|RUXX_PYRHO|PUTATIVE snRNP Sm-like protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 RGDYVLAV 10
RGD VLA+
Sbjct: 63 RGDNVLAI 70


>sp|RUXX_PYRAB|PUTATIVE snRNP Sm-like protein|Pyrococcus abyssi (strain GE5 /

Query: 3 RGDYVLAV 10
RGD VLA+
Sbjct: 63 RGDNVLAI 70


>sp|RUXX_THEON|PUTATIVE snRNP Sm-like protein|Thermococcus onnurineus (strain NA1)

Query: 3 RGDYVLAV 10
RGD VLA+
Sbjct: 63 RGDNVLAI 70


>sp|Y1335_THEKO|UPF0201 protein TK1335|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 ERGDYVL 8
+RGDY++
Sbjct: 40 DRGDYII 46


>sp|Y1346_THEON|UPF0201 protein TON_1346|Thermococcus onnurineus (strain NA1)

Query: 2 ERGDYVL 8
+RGDY++
Sbjct: 37 DRGDYII 43


>sp|DPOL_THEFM|DNA polymerase|Thermococcus fumicolans

Query: 4 GDYVLAV 10
GDYVL +
Sbjct: 430 GDYVLGI 436


>sp|RUXX_THEGJ|PUTATIVE snRNP Sm-like protein|Thermococcus gammatolerans (strain DSM

Query: 3 RGDYVLAV 10
RGD VLA+
Sbjct: 63 RGDNVLAI 70


>sp|NDK_METHJ|NUCLEOSIDE diphosphate kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 RGDYVLAV 10
RGDY L +
Sbjct: 102 RGDYALEI 109


>sp|SPSS1_ARCFU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KERGDYVLAV 10
K+RG+ VLA+
Sbjct: 143 KKRGEVVLAL 152


>sp|Y1584_METJA|UNCHARACTERIZED protein MJ1584|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ERGDYVLA 9
E+GDY++
Sbjct: 139 EQGDYIIG 146


>sp|RNP4_HYPBU|RIBONUCLEASE P protein component 4|Hyperthermus butylicus (strain DSM 5456

Query: 2 ERGDYVLA 9
RGDY LA
Sbjct: 32 RRGDYELA 39




517|Sequence|2581|2590|YVLAVKWGEE

>sp|FLAJ_METJA|FLAGELLA accessory protein J|Methanocaldococcus jannaschii (strain ATCC

Query: 1 YVLAVKWG 8
YVL KWG
Sbjct: 122 YVLTDKWG 129


>sp|RIFK_METLZ|RIBOFLAVIN kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 YVLAVKWGEE 10
YVL + GEE
Sbjct: 66 YVLVTRSGEE 75


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YVLAVKWGEE 10
Y KWGEE
Sbjct: 1394 YFTPRKWGEE 1403


>sp|SYC_THEKO|CYSTEINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 LAVKWGEE 10
++ KWGEE
Sbjct: 335 ISFKWGEE 342


>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 1 YVLAVKWGEE 10
Y KWGEE
Sbjct: 983 YFAPRKWGEE 992


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YVLAVKWGEE 10
Y KWGEE
Sbjct: 983 YFAPRKWGEE 992


>sp|KDPB_THEVO|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Thermoplasma volcanium (strain ATCC

Query: 1 YVLAVKWG 8
Y+L + WG
Sbjct: 658 YMLLIAWG 665


>sp|HIS2_METPE|PHOSPHORIBOSYL-ATP pyrophosphatase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 YVLAVKWGE 9
++LAVK GE
Sbjct: 51 FILAVKNGE 59


>sp|BACH_NATPH|HALORHODOPSIN pharaonis (Natronobacterium pharaonis)

Query: 1 YVLAVKWGEE 10
Y+L V+W ++
Sbjct: 192 YILLVEWAQD 201




518|Sequence|2586|2595|KWGEEHIPGS

>sp|DNAG_PICTO|DNA primase DnaG|Picrophilus torridus (strain ATCC 700027

Query: 2 WGEEHIPG 9
+GEEH+P
Sbjct: 157 YGEEHLPA 164


>sp|SYS_METMJ|SERINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 KWGEEHIPG 9
+WGE IP
Sbjct: 128 RWGEPEIPA 136


>sp|CMR4_SACS2|CRISPR system CMR subunit Cmr4|Saccharolobus solfataricus (strain ATCC

Query: 2 WGEEHIP 8
W EE++P
Sbjct: 251 WSEEYVP 257


>sp|Y160_METLZ|PUTATIVE HTH-type transcriptional regulatory protein|Methanocorpusculum

Query: 4 EEHIPGS 10
EEH+P S
Sbjct: 196 EEHVPAS 202


>sp|SAHH_SACS2|ADENOSYLHOMOCYSTEINASE solfataricus (strain ATCC 35092

Query: 1 KWGEEHIP 8
+W E H+P
Sbjct: 19 EWAERHMP 26


>sp|SAHH_AERPE|ADENOSYLHOMOCYSTEINASE pernix (strain ATCC 700893

Query: 1 KWGEEHIP 8
+W E H+P
Sbjct: 21 EWAERHMP 28


>sp|DNAG_THEPD|DNA primase DnaG|Thermofilum pendens (strain DSM 2475

Query: 1 KWGEEHIPG 9
++GEE +PG
Sbjct: 155 EYGEEKLPG 163


>sp|SYE_PYRNV|GLUTAMATE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 KWGEEHI 7
+W EEHI
Sbjct: 171 RWDEEHI 177


>sp|PRIS_PICTO|DNA primase small subunit PriS|Picrophilus torridus (strain ATCC 700027

Query: 5 EHIPGS 10
+HIPGS
Sbjct: 96 DHIPGS 101


>sp|SIHH_METJA|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KWGEEHIP 8
+W ++H+P
Sbjct: 18 QWAKQHMP 25


>sp|RFCL_METTH|REPLICATION factor C large subunit|Methanothermobacter thermautotrophicus

Query: 2 WGEEHIPGS 10
W E++ PGS
Sbjct: 3 WTEKYRPGS 11


>sp|CMR4_PYRFU|CRISPR system Cmr endoribonuclease Cmr4|Pyrococcus furiosus (strain ATCC

Query: 2 WGEEHIP 8
W EE+IP
Sbjct: 225 WYEEYIP 231


>sp|Y818_METJA|UNCHARACTERIZED protein MJ0818|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KWGEEH 6
KW EEH
Sbjct: 196 KWCEEH 201


>sp|RNH2_METMA|RIBONUCLEASE HII|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KWGEEH 6
KWG+EH
Sbjct: 190 KWGKEH 195


>sp|SAHH_THEVO|ADENOSYLHOMOCYSTEINASE volcanium (strain ATCC 51530

Query: 1 KWGEEHIP 8
+W +H+P
Sbjct: 11 EWARDHMP 18


>sp|RNH2_METAC|RIBONUCLEASE HII|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KWGEEH 6
KWG+EH
Sbjct: 190 KWGKEH 195


>sp|SAHH_SULAC|ADENOSYLHOMOCYSTEINASE acidocaldarius (strain ATCC 33909

Query: 1 KWGEEHIPG 9
+W E H+P
Sbjct: 19 EWAELHMPA 27


>sp|RS8_CALMQ|SMALL ribosomal subunit protein uS8|Caldivirga maquilingensis (strain

Query: 1 KWGEEHIPG 9
KW E+++P
Sbjct: 88 KWEEKYLPA 96


>sp|RSMA_HALSA|PROBABLE ribosomal RNA small subunit|Halobacterium salinarum (strain ATCC

Query: 2 WGEEHIPG 9
WG E PG
Sbjct: 271 WGVETAPG 278


>sp|RSMA_HALS3|PROBABLE ribosomal RNA small subunit|Halobacterium salinarum (strain ATCC

Query: 2 WGEEHIPG 9
WG E PG
Sbjct: 271 WGVETAPG 278


>sp|GLYA_NATPD|SERINE hydroxymethyltransferase|Natronomonas pharaonis (strain ATCC

Query: 2 WGEEHI 7
WG EHI
Sbjct: 84 WGAEHI 89


>sp|SYA_STAMF|ALANINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 3 GEEHIP 8
G EHIP
Sbjct: 552 GNEHIP 557


>sp|SAHH_SULTO|ADENOSYLHOMOCYSTEINASE tokodaii (strain DSM 16993

Query: 1 KWGEEHIPG 9
+W E H+P
Sbjct: 19 EWAEIHMPA 27


>sp|Y3407_METJA|UNCHARACTERIZED protein MJECS07|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KWGEEHIP 8
KW +E+IP
Sbjct: 410 KWLKENIP 417


>sp|SYE_CALMQ|GLUTAMATE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 KWGEEHI 7
KW EE+I
Sbjct: 177 KWDEEYI 183


>sp|GLYA_HALWD|SERINE hydroxymethyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 WGEEHI 7
WG EH+
Sbjct: 84 WGAEHV 89


>sp|RL31_THEAC|LARGE ribosomal subunit protein eL31|Thermoplasma acidophilum (strain

Query: 3 GEEHIPG 9
G EHIP
Sbjct: 64 GREHIPS 70


>sp|SYE_STAMF|GLUTAMATE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 KWGEEHI 7
KW EE+I
Sbjct: 153 KWNEEYI 159


>sp|AROC_METKA|CHORISMATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 WGEEHIPG 9
WGE H P
Sbjct: 13 WGESHGPA 20


>sp|AATA3_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 WGEEHI 7
W EEHI
Sbjct: 446 WWEEHI 451


>sp|THTR_METTH|PUTATIVE thiosulfate sulfurtransferase|Methanothermobacter

Query: 5 EHIPGS 10
EHIPG+
Sbjct: 41 EHIPGA 46


>sp|RS11_METLZ|SMALL ribosomal subunit protein uS11|Methanocorpusculum labreanum

Query: 1 KWGEEHIPGS 10
KWG HI S
Sbjct: 7 KWGIAHIFAS 16




519|Sequence|2591|2602|HIPGSPFHVTVP

>sp|MTMB_METMA|MONOMETHYLAMINE methyltransferase MtmB|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IPGSPFHV 9
IPGSP+ V
Sbjct: 170 IPGSPYEV 177


>sp|SUDHA_PYRFU|SULFIDE dehydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC

Query: 2 IPGSPFHVTVP 12
I G P H+ +P
Sbjct: 53 IKGCPVHINIP 63


>sp|PRIS_METBU|DNA primase small subunit PriS|Methanococcoides burtonii (strain DSM

Query: 1 HIPGSP 6
HIPG+P
Sbjct: 103 HIPGAP 108


>sp|NTPTH_THEKO|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 HIPGSPF 7
H+PG PF
Sbjct: 71 HLPGVPF 77


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 PGSPFHV 9
P SPFH+
Sbjct: 38 PNSPFHL 44


>sp|FLAB1_METVS|FLAGELLIN B1|Methanococcus vannielii (strain ATCC 35089

Query: 3 PGSPFHVTV 11
P S FHV V
Sbjct: 137 PASEFHVAV 145


>sp|GLNA_SACS2|GLUTAMINE synthetase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 IPGSPFHVTVP 12
+PG H+T+P
Sbjct: 27 VPGRLHHITIP 37


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 PGSPFHV 9
P SPFH+
Sbjct: 37 PNSPFHL 43


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 3 PGSPFHV 9
P SPFH+
Sbjct: 49 PNSPFHL 55


>sp|RS17_METST|SMALL ribosomal subunit protein uS17|Methanosphaera stadtmanae (strain

Query: 1 HIPGSPFH 8
H P PFH
Sbjct: 14 HDPNCPFH 21


>sp|Y002_METMP|UPF0425 pyridoxal phosphate-dependent protein MMP0002|Methanococcus

Query: 1 HIPGSPFHVTVP 12
++P P H ++P
Sbjct: 106 YVPEKPAHPSIP 117


>sp|RS4_AERPE|SMALL ribosomal subunit protein uS4|Aeropyrum pernix (strain ATCC 700893

Query: 1 HIPGSPF 7
+ PGSPF
Sbjct: 155 YAPGSPF 161


>sp|Y1289_ARCFU|PUTATIVE GTPase AF_1289|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PGSPF 7
PGSPF
Sbjct: 84 PGSPF 88


>sp|Y811_METTH|UPF0305 protein MTH_811|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 HIPGSPF 7
H PG+PF
Sbjct: 109 HPPGTPF 115


>sp|Y419_ARCFU|UNCHARACTERIZED protein AF_0419|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IPGSPFH 8
+PGSP H
Sbjct: 14 LPGSPEH 20


>sp|Y1513_METJA|UNCHARACTERIZED protein MJ1513|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 PFHVTVP 12
PF VT+P
Sbjct: 182 PFEVTLP 188


>sp|KADA_SACS2|ADENYLATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 HIPGSPFHV 9
++PG P HV
Sbjct: 103 YLPGLPRHV 111


>sp|KADA_SACI7|ADENYLATE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 HIPGSPFHV 9
++PG P HV
Sbjct: 103 YLPGLPRHV 111


>sp|KADA_SACI6|ADENYLATE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 HIPGSPFHV 9
++PG P HV
Sbjct: 103 YLPGLPRHV 111


>sp|KADA_SACI4|ADENYLATE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 HIPGSPFHV 9
++PG P HV
Sbjct: 103 YLPGLPRHV 111


>sp|KADA_SACI3|ADENYLATE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 HIPGSPFHV 9
++PG P HV
Sbjct: 103 YLPGLPRHV 111


>sp|KADA_SACI2|ADENYLATE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 HIPGSPFHV 9
++PG P HV
Sbjct: 103 YLPGLPRHV 111


>sp|KADA_SACI1|ADENYLATE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 HIPGSPFHV 9
++PG P HV
Sbjct: 103 YLPGLPRHV 111


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IPGSPFHV 9
I G+P+HV
Sbjct: 78 ISGNPYHV 85


>sp|SYG_METVS|GLYCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 4 GSPFHVTV 11
G+PF VTV
Sbjct: 531 GTPFCVTV 538


>sp|SYG_ARCFU|GLYCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GSPFHVTV 11
G+PF VTV
Sbjct: 511 GTPFCVTV 518


>sp|UPPS_HALSA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Halobacterium

Query: 2 IPGSPFHVTV 11
I G+P HV V
Sbjct: 21 IDGAPAHVAV 30


>sp|DTDA_METKA|D-AMINOACYL-TRNA deacylase|Methanopyrus kandleri (strain AV19 /

Query: 1 HIPGSP 6
H+PG+P
Sbjct: 92 HVPGNP 97


>sp|VHTG_METMA|F420 non-reducing hydrogenase II small|Methanosarcina mazei (strain ATCC

Query: 1 HIPGSPFH 8
+IPG P H
Sbjct: 223 NIPGCPAH 230


>sp|MTNA_AERPE|PUTATIVE methylthioribose-1-phosphate isomerase|Aeropyrum pernix (strain

Query: 4 GSPFHVTVP 12
G PF+V P
Sbjct: 283 GVPFYVAAP 291


>sp|TET_PYRHO|TETRAHEDRAL aminopeptidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IPGSPFHVTV 11
IPG+P H V
Sbjct: 242 IPGTPEHKQV 251


>sp|Y1303_METHJ|UPF0182 protein Mhun_1303|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 SPFHVTVP 12
+PFH++ P
Sbjct: 116 TPFHISDP 123


>sp|VHOG_METMA|F420 non-reducing hydrogenase I small|Methanosarcina mazei (strain ATCC

Query: 1 HIPGSPFH 8
+IPG P H
Sbjct: 223 NIPGCPCH 230


>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 PGSPFHV 9
P SP+H+
Sbjct: 38 PNSPWHI 44


>sp|RL7A_PYRCJ|LARGE ribosomal subunit protein eL8|Pyrobaculum calidifontis (strain

Query: 2 IPGSPFHV 9
+PG PF+V
Sbjct: 15 LPGKPFYV 22


>sp|GGGPS_THEAC|GERANYLGERANYLGLYCERYL phosphate synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 GSPFHV 9
GSP+HV
Sbjct: 177 GSPYHV 182


>sp|DTDA_SULTO|D-AMINOACYL-TRNA deacylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 HIPGSPFHVTV 11
H PG+P T+
Sbjct: 60 HYPGNPIDKTM 70


>sp|CAS1_HALVD|CRISPR-ASSOCIATED endonuclease Cas1|Haloferax volcanii (strain ATCC 29605

Query: 2 IPGSPFHVT 10
+ G P+H T
Sbjct: 319 LTGEPYHAT 327


>sp|MTRA_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanosarcina barkeri (strain

Query: 1 HIPGSP 6
H+PG P
Sbjct: 35 HLPGQP 40


>sp|Y1914_METTH|UPF0425 pyridoxal phosphate-dependent protein MTH_1914|Methanothermobacter

Query: 1 HIPGSPFHVTVP 12
++P P H +VP
Sbjct: 104 YLPELPSHPSVP 115


>sp|MTRA_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanosarcina mazei (strain ATCC

Query: 1 HIPGSP 6
H+PG P
Sbjct: 35 HLPGKP 40


>sp|RL13_METHJ|LARGE ribosomal subunit protein uL13|Methanospirillum hungatei JF-1

Query: 4 GSPFHVTV 11
G+P HVT+
Sbjct: 122 GNPSHVTL 129






THE END