APOE_HUMAN Blast Output
Viruses
1|Sequence|1|10|MKVLWAALLV

>sp|FUS_RINDR|FUSION glycoprotein F0|Rinderpest virus (strain RBOK) (RDV)

Query: 1 MKVLWAALLV 10
MK+L+A LLV
Sbjct: 1 MKILFATLLV 10


>sp|FUS_RINDK|FUSION glycoprotein F0|Rinderpest virus (strain Kabete O)

Query: 1 MKVLWAALLV 10
MK+L+A LLV
Sbjct: 1 MKILFATLLV 10


>sp|VU4_HHV6Z|PROTEIN U4|Human herpesvirus 6B (strain Z29)

Query: 3 VLWAAL 8
VLWAAL
Sbjct: 73 VLWAAL 78


>sp|VU4_HHV6U|PROTEIN U4|Human herpesvirus 6A (strain Uganda-1102)

Query: 3 VLWAAL 8
VLWAAL
Sbjct: 73 VLWAAL 78


>sp|A1_BPSP|MINOR capsid protein A1|Enterobacteria phage SP (Bacteriophage SP)

Query: 5 WAALLV 10
WAALLV
Sbjct: 133 WAALLV 138


>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate

Query: 1 MKVLWAALLV 10
MKV+W + L+
Sbjct: 2 MKVIWFSSLI 11


>sp|GP_SFTS|ENVELOPMENT polyprotein|Dabie bandavirus (Severe fever with

Query: 1 MKVLWAALLV 10
MKV+W + L+
Sbjct: 2 MKVIWFSSLI 11




2|Sequence|6|15|AALLVTFLAG

>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean

Query: 1 AALLVTFLAG 10
AALLVTF G
Sbjct: 485 AALLVTFCFG 494


>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee

Query: 1 AALLVTFLAG 10
AALLVTF G
Sbjct: 485 AALLVTFCFG 494


>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo

Query: 1 AALLVTFLAG 10
AALLVTF G
Sbjct: 485 AALLVTFCFG 494


>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo

Query: 1 AALLVTFLAG 10
AALL+TF G
Sbjct: 483 AALLITFCFG 492


>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)

Query: 1 AALLVTFLAG 10
AALL+TF G
Sbjct: 483 AALLITFCFG 492


>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)

Query: 1 AALLVTFLAG 10
AALL+TF G
Sbjct: 483 AALLITFCFG 492


>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean

Query: 1 AALLVTFLAG 10
AALL+TF G
Sbjct: 483 AALLITFCFG 492




3|Sequence|11|20|TFLAGCQAKV

>sp|NS0_PCV2|PROTEIN NS0|Porcine circovirus 2 (PCV2)

Query: 1 TFLAGCQAKV 10
TF+AGC+ +
Sbjct: 13 TFMAGCRGMI 22


>sp|374R_IIV6|UNCHARACTERIZED protein 374R|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 TFLAGCQAKV 10
TF+ GC A +
Sbjct: 85 TFVLGCLASI 94




4|Sequence|16|25|CQAKVEQAVE

>sp|VE2_BPV1|REGULATORY protein E2|Bovine papillomavirus type 1

Query: 1 CQAKVEQAVE 10
CQ + +QA+E
Sbjct: 65 CQERAKQAIE 74


>sp|VE2_COPV6|REGULATORY protein E2|Canine oral papillomavirus (strain Y62)

Query: 2 QAKVEQAVE 10
QAK +QA+E
Sbjct: 66 QAKAKQAIE 74


>sp|VE2_BPV2|REGULATORY protein E2|Bos taurus papillomavirus 2 (Bovine

Query: 1 CQAKVEQAVE 10
CQ + +QA+E
Sbjct: 65 CQERAKQAIE 74


>sp|YO04_BPL2|UNCHARACTERIZED 18.2 kDa protein|Acholeplasma phage L2 (Bacteriophage L2)

Query: 2 QAKVEQAVE 10
QA +EQAVE
Sbjct: 135 QALIEQAVE 143




5|Sequence|21|30|EQAVETEPEP

***** No hits found ******


6|Sequence|26|35|TEPEPELRQQ

>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate

Query: 2 EPEPELR 8
EPEPEL+
Sbjct: 16 EPEPELK 22


>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate

Query: 2 EPEPELR 8
EPEPEL+
Sbjct: 16 EPEPELK 22


>sp|G1P_BPM13|GENE 1 protein|Enterobacteria phage M13 (Bacteriophage M13)

Query: 1 TEPEPELRQ 9
T+P+PE+++
Sbjct: 271 TQPKPEVKK 279


>sp|G1P_BPFD|GENE 1 protein|Enterobacteria phage fd (Bacteriophage fd)

Query: 1 TEPEPELRQ 9
T+P+PE+++
Sbjct: 271 TQPKPEVKK 279


>sp|G1P_BPF1|GENE 1 protein|Enterobacteria phage f1 (Bacteriophage f1)

Query: 1 TEPEPELRQ 9
T+P+PE+++
Sbjct: 271 TQPKPEVKK 279


>sp|E1B55_ADE40|E1B 55 kDa protein|Human adenovirus F serotype 40

Query: 1 TEPEPE 6
TEP+PE
Sbjct: 67 TEPDPE 72


>sp|E1B55_ADE41|E1B 55 kDa protein|Human adenovirus F serotype 41

Query: 1 TEPEPE 6
TEP+PE
Sbjct: 70 TEPDPE 75


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 1 TEPEPELRQQ 10
++P PELR Q
Sbjct: 304 SDPIPELRGQ 313


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 1 TEPEPELRQQ 10
++P PELR Q
Sbjct: 304 SDPIPELRGQ 313




7|Sequence|31|40|ELRQQTEWQS

>sp|VOLD_BPP2|OLD nuclease|Escherichia phage P2 (Bacteriophage P2)

Query: 3 RQQTEWQS 10
++QTEW S
Sbjct: 550 KKQTEWDS 557


>sp|YR596_MIMIV|PROBABLE FAD-linked sulfhydryl oxidase R596|Acanthamoeba polyphaga mimivirus

Query: 1 ELRQQTEWQ 9
EL++Q+ W+
Sbjct: 215 ELKKQSSWE 223




8|Sequence|36|45|TEWQSGQRWE

>sp|PAP1_MIMIV|PUTATIVE poly(A) polymerase catalytic subunit|Acanthamoeba polyphaga

Query: 5 SGQRWE 10
+GQRWE
Sbjct: 186 AGQRWE 191


>sp|LMP2_EBVG|LATENT membrane protein 2|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 TEWQSGQR 8
TEW SG R
Sbjct: 410 TEWGSGNR 417


>sp|LMP2_EBVB9|LATENT membrane protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 TEWQSGQR 8
TEW SG R
Sbjct: 411 TEWGSGNR 418


>sp|LMP2_EBVA8|LATENT membrane protein 2|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 TEWQSGQR 8
TEW SG R
Sbjct: 411 TEWGSGNR 418


>sp|VP4_MPRVN|UNCHARACTERIZED protein VP4|Micromonas pusilla reovirus (isolate Netherlands/2005)

Query: 2 EWQSGQR 8
EW SG+R
Sbjct: 897 EWSSGRR 903


>sp|TRM3_EHV1V|TRIPARTITE terminase subunit 3|Equine herpesvirus 1 (strain V592)

Query: 1 TEWQSGQRWE 10
++WQSG+ E
Sbjct: 90 SKWQSGEARE 99


>sp|TRM3_EHV1B|TRIPARTITE terminase subunit 3|Equine herpesvirus 1 (strain Ab4p)

Query: 1 TEWQSGQRWE 10
++WQSG+ E
Sbjct: 90 SKWQSGEARE 99


>sp|ENV_FIVU1|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (strain UT-113)

Query: 1 TEWQSGQRWE 10
+ W+ G RWE
Sbjct: 392 SSWKQGNRWE 401


>sp|NCAP_BDVV|NUCLEOPROTEIN disease virus (strain V)

Query: 2 EWQSGQRW 9
+W +GQ W
Sbjct: 195 DWINGQPW 202


>sp|NCAP_BDV1|NUCLEOPROTEIN disease virus 1 (BoDV-1)

Query: 2 EWQSGQRW 9
+W +GQ W
Sbjct: 195 DWINGQPW 202


>sp|VF118_IIV6|PUTATIVE myristoylated protein 118L|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 EWQSGQ 7
EWQ+GQ
Sbjct: 286 EWQNGQ 291


>sp|VG82_GAHVM|UNCHARACTERIZED gene 82 protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 2 EWQSGQR 8
EW SG R
Sbjct: 54 EWHSGDR 60


>sp|POL_RSVSB|GAG-POL polyprotein|Rous sarcoma virus subgroup B

Query: 3 WQSGQRWE 10
W+ G RWE
Sbjct: 1170 WREGPRWE 1177


>sp|POL_ALV|GAG-POL polyprotein|Avian leukosis virus (ALV)

Query: 3 WQSGQRWE 10
W+ G RWE
Sbjct: 1170 WREGPRWE 1177


>sp|POL_RSVP|GAG-POL polyprotein|Rous sarcoma virus subgroup C

Query: 3 WQSGQRWE 10
W+ G RWE
Sbjct: 1170 WREGPRWE 1177


>sp|POL_ALVA|GAG-POL polyprotein|Avian leukosis virus subgroup A

Query: 3 WQSGQRWE 10
W+ G RWE
Sbjct: 1170 WREGPRWE 1177




9|Sequence|41|50|GQRWELALGR

>sp|PAP1_MIMIV|PUTATIVE poly(A) polymerase catalytic subunit|Acanthamoeba polyphaga

Query: 1 GQRWELALGR 10
GQRWE A R
Sbjct: 187 GQRWEKAFER 196


>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P

Query: 1 GQRWELA 7
G+RWEL+
Sbjct: 22 GERWELS 28


>sp|AP3A_SARS2|ORF3A protein|Severe acute respiratory syndrome coronavirus

Query: 2 QRWELALGR 10
+RW+LAL +
Sbjct: 67 KRWQLALSK 75


>sp|AP3A_BCRP3|PROTEIN 3|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 2 QRWELALGR 10
+RW+LAL +
Sbjct: 67 KRWQLALHK 75


>sp|AP3A_SARS|ORF3A protein|Severe acute respiratory syndrome coronavirus

Query: 2 QRWELAL 8
+RW+LAL
Sbjct: 67 KRWQLAL 73


>sp|AP3A_BC279|PROTEIN 3|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 2 QRWELAL 8
+RW+LAL
Sbjct: 67 KRWQLAL 73


>sp|VG40_ALHV1|UNCHARACTERIZED gene 40 protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 3 RWELAL 8
RWE+AL
Sbjct: 99 RWEMAL 104


>sp|DPO22_BPK64|DEPOLYMERASE, capsule K25-specific|Klebsiella phage K64-1 (Bacteriophage K64-1)

Query: 3 RWELALGR 10
RW + LGR
Sbjct: 238 RWGIGLGR 245


>sp|AP3A_BCHK3|PROTEIN 3|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 2 QRWELAL 8
+RW+LAL
Sbjct: 67 RRWQLAL 73


>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)

Query: 1 GQRWELALGR 10
GQRW++ R
Sbjct: 6055 GQRWDVVRPR 6064


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 GQRWELALGR 10
GQRW++ R
Sbjct: 6055 GQRWDVVRPR 6064


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 1 GQRWELALGR 10
GQRW++ R
Sbjct: 6055 GQRWDVVRPR 6064


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 1 GQRWELALGR 10
GQRW++ R
Sbjct: 6055 GQRWDVVRPR 6064


>sp|MCP_IRV9|MAJOR capsid protein|Wiseana iridescent virus (WIV) (Insect

Query: 1 GQRWELALGR 10
GQ W +++ R
Sbjct: 62 GQEWSVSISR 71


>sp|MCP_IRV22|MAJOR capsid protein|Simulium iridescent virus (IIV-22) (Insect

Query: 1 GQRWELALGR 10
GQ W +++ R
Sbjct: 62 GQEWSVSISR 71


>sp|MCP_IRV16|MAJOR capsid protein|Costelytra zealandica iridescent virus (CzIV)

Query: 1 GQRWELALGR 10
GQ W +++ R
Sbjct: 62 GQEWSVSISR 71


>sp|MCP_IRV1|MAJOR capsid protein|Tipula iridescent virus (TIV) (Insect

Query: 1 GQRWELALGR 10
GQ W +++ R
Sbjct: 62 GQEWSVSISR 71


>sp|MCP_IIV3|MAJOR capsid protein|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 GQRWELALGR 10
GQ W +++ R
Sbjct: 66 GQNWSVSISR 75




10|Sequence|46|55|LALGRFWDYL

>sp|3002R_ASFWA|PROTEIN MGF 300-2R|African swine fever virus (isolate

Query: 1 LALGRFWD 8
LALG +WD
Sbjct: 30 LALGLYWD 37


>sp|3002R_ASFP4|PROTEIN MGF 300-2R|African swine fever virus (isolate

Query: 1 LALGRFWD 8
LALG +WD
Sbjct: 30 LALGLYWD 37


>sp|3002R_ASFM2|PROTEIN MGF 300-2R|African swine fever virus (isolate

Query: 1 LALGRFWD 8
LALG +WD
Sbjct: 30 LALGLYWD 37


>sp|3002R_ASFB7|PROTEIN MGF 300-2R|African swine fever virus (strain

Query: 1 LALGRFWD 8
LALG +WD
Sbjct: 30 LALGLYWD 37


>sp|YR354_MIMIV|UNCHARACTERIZED protein R354|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 LGRFWDYL 10
L +FWDY+
Sbjct: 459 LQQFWDYV 466


>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain

Query: 4 GRFWDY 9
GRFW Y
Sbjct: 380 GRFWRY 385


>sp|VL2_HPV30|MINOR capsid protein L2|Human papillomavirus 30

Query: 1 LALGRFWD 8
+ LG++WD
Sbjct: 390 IPLGKYWD 397


>sp|YHYA_BPH44|UNCHARACTERIZED 65 kDa protein in|Streptococcus pyogenes phage H4489A

Query: 1 LALGRFW 7
LALGR W
Sbjct: 558 LALGRCW 564


>sp|GP_TSWVR|ENVELOPMENT polyprotein|Tomato spotted wilt virus (strain

Query: 6 FWDYL 10
FWDY+
Sbjct: 1044 FWDYI 1048


>sp|GP_TSWVD|ENVELOPMENT polyprotein|Tomato spotted wilt virus (isolate

Query: 6 FWDYL 10
FWDY+
Sbjct: 1044 FWDYI 1048


>sp|GP_TSWV1|ENVELOPMENT polyprotein|Tomato spotted wilt virus (strain

Query: 6 FWDYL 10
FWDY+
Sbjct: 1044 FWDYI 1048


>sp|GP_TSWV|ENVELOPMENT polyprotein|Tomato spotted wilt virus (TSWV)

Query: 6 FWDYL 10
FWDY+
Sbjct: 1044 FWDYI 1048


>sp|GLYCO_TAVCV|GLYCOPROTEIN vein chlorosis virus (TAVCV)

Query: 2 ALGRFW 7
LGRFW
Sbjct: 208 GLGRFW 213


>sp|ENV_MMTVB|ENVELOPE glycoprotein gp70|Mouse mammary tumor virus (strain

Query: 2 ALGRFWDY 9
ALG WD+
Sbjct: 268 ALGLLWDF 275


>sp|ENV_MMTVG|ENVELOPE glycoprotein gp70|Mouse mammary tumor virus (strain

Query: 2 ALGRFWDY 9
ALG WD+
Sbjct: 268 ALGLLWDF 275


>sp|ENV_MMTVC|ENVELOPE glycoprotein gp70|Mouse mammary tumor virus (strain

Query: 2 ALGRFWDY 9
ALG WD+
Sbjct: 268 ALGLLWDF 275


>sp|GP_INSV|ENVELOPMENT polyprotein|Impatiens necrotic spot virus (INSV)

Query: 6 FWDYL 10
FWDY+
Sbjct: 1021 FWDYV 1025


>sp|3002R_ASFK5|PROTEIN MGF 300-2R|African swine fever virus (isolate

Query: 1 LALGRFWD 8
LALG +W+
Sbjct: 30 LALGLYWN 37


>sp|VE6_HPV47|PROTEIN E6|Human papillomavirus 47

Query: 4 GRFWDYL 10
GRF DYL
Sbjct: 44 GRFLDYL 50


>sp|TAIL1_BPHC1|PUTATIVE tail protein gp30|Haemophilus phage HP1 (strain HP1c1)

Query: 3 LGRFWDYL 10
G++WDY+
Sbjct: 21 FGKWWDYV 28


>sp|VL1_HPV50|MAJOR capsid protein L1|Human papillomavirus type 50

Query: 2 ALGRFWD 8
A+G +WD
Sbjct: 163 AVGEYWD 169


>sp|GT315_ABVP|PUTATIVE glycosyltransferase ORF315|Acidianus bottle-shaped virus (isolate

Query: 4 GRFWDYL 10
G FW++L
Sbjct: 160 GHFWNFL 166


>sp|SH_BRSVA|SMALL hydrophobic protein|Bovine respiratory syncytial virus (strain

Query: 4 GRFWDYL 10
G+FW Y
Sbjct: 12 GKFWTYF 18




11|Sequence|51|60|FWDYLRWVQT

>sp|HELI_EHV2|DNA replication helicase|Equine herpesvirus 2 (strain 86/87)

Query: 1 FWDYLRWVQT 10
+W Y W+QT
Sbjct: 209 YWFYNSWLQT 218


>sp|GP_TSWVR|ENVELOPMENT polyprotein|Tomato spotted wilt virus (strain

Query: 1 FWDYLR 6
FWDY++
Sbjct: 1044 FWDYIK 1049


>sp|GP_TSWVD|ENVELOPMENT polyprotein|Tomato spotted wilt virus (isolate

Query: 1 FWDYLR 6
FWDY++
Sbjct: 1044 FWDYIK 1049


>sp|GP_TSWV1|ENVELOPMENT polyprotein|Tomato spotted wilt virus (strain

Query: 1 FWDYLR 6
FWDY++
Sbjct: 1044 FWDYIK 1049


>sp|GP_TSWV|ENVELOPMENT polyprotein|Tomato spotted wilt virus (TSWV)

Query: 1 FWDYLR 6
FWDY++
Sbjct: 1044 FWDYIK 1049


>sp|POL1_SDVS5|RNA1 polyprotein|Satsuma dwarf virus (isolate Satsuma

Query: 2 WDYLRWVQT 10
WD +W QT
Sbjct: 594 WDCGKWAQT 602


>sp|TEG5_EHV1B|TEGUMENT protein UL47 homolog|Equine herpesvirus 1 (strain Ab4p)

Query: 1 FWDYLRWV 8
FW YLR V
Sbjct: 81 FWGYLRRV 88


>sp|DPOL_BPAPS|PROBABLE DNA polymerase|Acyrthosiphon pisum secondary endosymbiont phage

Query: 2 WDYLRWVQT 10
WD + WV+T
Sbjct: 635 WDGIEWVRT 643


>sp|TEG5_EHV1V|TEGUMENT protein UL47 homolog|Equine herpesvirus 1 (strain V592)

Query: 1 FWDYLRWV 8
FW YLR V
Sbjct: 81 FWGYLRRV 88


>sp|L_GOGV|RNA-DIRECTED RNA polymerase L|Alethinophid 1 reptarenavirus (isolate

Query: 3 DYLRWVQT 10
D+L+W+ T
Sbjct: 732 DFLKWIST 739


>sp|TEG5_EHV4|TEGUMENT protein UL47 homolog|Equine herpesvirus 4 (strain 1942)

Query: 1 FWDYLRWV 8
FW YLR V
Sbjct: 81 FWGYLRRV 88


>sp|RDRP_WCCVB|RNA-DIRECTED RNA polymerase|White clover cryptic virus 1

Query: 1 FWDYLRWVQ 9
+W+YL W++
Sbjct: 267 YWEYLAWIK 275


>sp|YL769_MIMIV|PUTATIVE ankyrin repeat protein L769|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 DYLRWV 8
DYL+WV
Sbjct: 541 DYLQWV 546


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1 FWDYLRWVQ 9
FW YL++++
Sbjct: 5259 FWVYLQYIE 5267


>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 1 FWDYLRWVQ 9
FW YL++++
Sbjct: 5350 FWVYLQYIE 5358


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 FWDYLRWVQ 9
FW YL++++
Sbjct: 5303 FWVYLQYIE 5311


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 FWDYLRWVQ 9
FW YL++++
Sbjct: 5310 FWVYLQYIE 5318


>sp|MVP_LIYV9|MOVEMENT protein Hsp70h|Lettuce infectious yellows virus (isolate

Query: 1 FWDYLRWV 8
F+D RWV
Sbjct: 67 FYDLKRWV 74


>sp|POLG_FMDVZ|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 4 YLRWV 8
YLRWV
Sbjct: 2322 YLRWV 2326


>sp|POLG_FMDVT|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 4 YLRWV 8
YLRWV
Sbjct: 2316 YLRWV 2320


>sp|POLG_FMDVS|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 4 YLRWV 8
YLRWV
Sbjct: 2316 YLRWV 2320


>sp|POLG_FMDVP|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 4 YLRWV 8
YLRWV
Sbjct: 2311 YLRWV 2315


>sp|POLG_FMDVO|GENOME polyprotein|Foot-and-mouth disease virus serotype O

Query: 4 YLRWV 8
YLRWV
Sbjct: 2321 YLRWV 2325


>sp|POLG_FMDVI|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 4 YLRWV 8
YLRWV
Sbjct: 2317 YLRWV 2321


>sp|POLG_FMDVC|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 4 YLRWV 8
YLRWV
Sbjct: 2322 YLRWV 2326


>sp|POLG_FMDVA|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 4 YLRWV 8
YLRWV
Sbjct: 2322 YLRWV 2326


>sp|POLG_FMDV5|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 4 YLRWV 8
YLRWV
Sbjct: 2321 YLRWV 2325


>sp|POLG_FMDV1|GENOME polyprotein|Foot-and-mouth disease virus (strain A10/Holland/1961

Query: 4 YLRWV 8
YLRWV
Sbjct: 2321 YLRWV 2325


>sp|POLG_FMDS2|GENOME polyprotein|Foot-and-mouth disease virus serotype SAT-2

Query: 4 YLRWV 8
YLRWV
Sbjct: 2324 YLRWV 2328


>sp|POLG_FMDA1|GENOME polyprotein|Foot-and-mouth disease virus serotype Asia-1

Query: 4 YLRWV 8
YLRWV
Sbjct: 2318 YLRWV 2322


>sp|POLG_TEV|GENOME polyprotein|Tobacco etch virus (TEV)

Query: 2 WDYLRWVQ 9
WD L W++
Sbjct: 928 WDELTWLE 935


>sp|B14_RFVKA|PROTEIN B14 homolog|Rabbit fibroma virus (strain Kasza)

Query: 3 DYLRWVQT 10
DYLRW T
Sbjct: 22 DYLRWSST 29


>sp|POL2_CNSV|RNA2 polyprotein|Cycas necrotic stunt virus (CNSV)

Query: 4 YLRWVQ 9
Y+RW+Q
Sbjct: 723 YMRWLQ 728


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 1 FWDYLRWVQ 9
FW YL++++
Sbjct: 5114 FWCYLQYIK 5122


>sp|BP47_BPMU|BASEPLATE protein gp47|Escherichia phage Mu (Bacteriophage Mu)

Query: 2 WDYLRWVQ 9
+DY+RW +
Sbjct: 199 FDYVRWAR 206


>sp|END7_BPT4|RECOMBINATION endonuclease VII|Enterobacteria phage T4 (Bacteriophage T4)

Query: 3 DYLRWVQ 9
DYL W++
Sbjct: 83 DYLEWLE 89


>sp|AAP_AAV2S|ASSEMBLY activating protein AAP|Adeno-associated virus 2 (isolate

Query: 2 WDYLRWVQ 9
W+ +RW+Q
Sbjct: 23 WELIRWLQ 30


>sp|SRC_RSVSE|TYROSINE-PROTEIN kinase transforming protein Src|Rous sarcoma virus subgroup E

Query: 1 FWDYLRWVQT 10
+DY W++T
Sbjct: 89 LYDYESWIET 98


>sp|SRC_RSVSA|TYROSINE-PROTEIN kinase transforming protein Src|Rous sarcoma virus subgroup A

Query: 1 FWDYLRWVQT 10
+DY W++T
Sbjct: 89 LYDYESWIET 98


>sp|NS1A_TASV2|NON-STRUCTURAL polyprotein 1A|Turkey astrovirus 2 (TAstV-2)

Query: 2 WDYLRWV 8
WD L W+
Sbjct: 224 WDLLGWI 230


>sp|C2_ECTVM|KELCH repeat protein C2|Ectromelia virus (strain Moscow) (ECTV)

Query: 3 DYLRW 7
DY+RW
Sbjct: 56 DYMRW 60


>sp|YR771_MIMIV|PUTATIVE resolvase R771|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 WDYLRWVQT 10
WD W++T
Sbjct: 24 WDKKGWIKT 32


>sp|YR080_MIMIV|PUTATIVE resolvase R80|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 WDYLRWVQT 10
WD W++T
Sbjct: 24 WDKKGWIKT 32


>sp|VC02_VACCC|KELCH repeat protein C2|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 DYLRW 7
DY+RW
Sbjct: 56 DYMRW 60


>sp|C2_RABPU|KELCH repeat protein C2|Rabbitpox virus (strain Utrecht) (RPV)

Query: 3 DYLRW 7
DY+RW
Sbjct: 56 DYMRW 60


>sp|C2_CWPXG|KELCH repeat protein C2|Cowpox virus (strain GRI-90 /

Query: 3 DYLRW 7
DY+RW
Sbjct: 56 DYMRW 60


>sp|C2_CAMPS|KELCH repeat protein C2|Camelpox virus (strain CMS)

Query: 3 DYLRW 7
DY+RW
Sbjct: 56 DYMRW 60


>sp|C2_CAMPM|KELCH repeat protein C2|Camelpox virus (strain M-96)

Query: 3 DYLRW 7
DY+RW
Sbjct: 56 DYMRW 60


>sp|R1AB_BYVU|REPLICASE polyprotein 1ab|Beet yellows virus (isolate Ukraine)

Query: 2 WDYLRWVQT 10
WD W+ T
Sbjct: 2395 WDVCAWLST 2403


>sp|VC02_VACCT|KELCH repeat protein C2|Vaccinia virus (strain Tian Tan)

Query: 3 DYLRW 7
DY+RW
Sbjct: 56 DYIRW 60


>sp|C2_VACCW|KELCH repeat protein C2|Vaccinia virus (strain Western Reserve)

Query: 3 DYLRW 7
DY+RW
Sbjct: 56 DYIRW 60




12|Sequence|56|65|RWVQTLSEQV

>sp|L_LATVB|RNA-DIRECTED RNA polymerase L|Latino mammarenavirus (isolate Rat/Bolivia/MARU

Query: 1 RWVQTLSEQ 9
+W++TLSE+
Sbjct: 899 QWMETLSEE 907


>sp|PRO_SMRVH|GAG-PRO polyprotein|Squirrel monkey retrovirus (SMRV-H) (SMRV-HLB)

Query: 2 WVQTLSEQ 9
WVQ +S+Q
Sbjct: 843 WVQQISQQ 850


>sp|POL_SMRVH|GAG-PRO-POL polyprotein|Squirrel monkey retrovirus (SMRV-H) (SMRV-HLB)

Query: 2 WVQTLSEQ 9
WVQ +S+Q
Sbjct: 843 WVQQISQQ 850


>sp|VP2_BFPYV|MINOR capsid protein VP2|Budgerigar fledgling disease virus (BFPyV)

Query: 2 WVQTLSEQV 10
W Q+L EQV
Sbjct: 138 WAQSLYEQV 146


>sp|NRAM_I65A0|NEURAMINIDASE A virus (strain A/Quail/Italy/1117/1965

Query: 2 WVQTLSEQV 10
W QT EQV
Sbjct: 380 WTQTSKEQV 388


>sp|NRAM_I83A4|NEURAMINIDASE A virus (strain A/Turkey/Ireland/1378/1983

Query: 2 WVQTLSEQV 10
W QT EQV
Sbjct: 380 WTQTSKEQV 388




13|Sequence|61|70|LSEQVQEELL

***** No hits found ******


14|Sequence|66|75|QEELLSSQVT

***** No hits found ******


15|Sequence|71|80|SSQVTQELRA

***** No hits found ******


16|Sequence|76|85|QELRALMDET

>sp|POLG_PESV|GENOME polyprotein|Porcine enteric sapovirus (isolate Swine/United

Query: 3 LRALMDET 10
LRAL+DET
Sbjct: 1602 LRALLDET 1609


>sp|CHIT_NPVOP|PROBABLE endochitinase|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 1 QELRALMDE 9
+ELRA++DE
Sbjct: 330 KELRAMLDE 338


>sp|CHIT_NPVAC|CHITINASE californica nuclear polyhedrosis virus

Query: 1 QELRALMDE 9
+ELRA++D+
Sbjct: 331 EELRAMLDD 339


>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)

Query: 4 RALMDET 10
RAL+DET
Sbjct: 2450 RALLDET 2456


>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain

Query: 4 RALMDET 10
RAL+DET
Sbjct: 2452 RALLDET 2458




17|Sequence|81|90|LMDETMKELK

>sp|L_TACVF|RNA-DIRECTED RNA polymerase L|Tacaribe virus (strain Franze-Fernandez) (TCRV)

Query: 2 MDETMKELK 10
MDET+ ELK
Sbjct: 1 MDETVSELK 9


>sp|194K_TRVSY|REPLICASE large subunit|Tobacco rattle virus (strain SYM)

Query: 1 LMDETMKELK 10
L++ETMK+LK
Sbjct: 1310 LIEETMKKLK 1319


>sp|RDRP_TRVPP|REPLICASE large subunit|Tobacco rattle virus (isolate PpK20)

Query: 1 LMDETMKELK 10
L++ETMK+LK
Sbjct: 1310 LIEETMKKLK 1319


>sp|RDRP_PLRVW|PROTEIN P1-P2|Potato leafroll virus (strain

Query: 3 DETMKELK 10
DET+KEL+
Sbjct: 410 DETVKELE 417


>sp|P1_PLRVW|PROTEIN P1|Potato leafroll virus (strain

Query: 3 DETMKELK 10
DET+KEL+
Sbjct: 410 DETVKELE 417


>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo

Query: 4 ETMKELK 10
ET+KELK
Sbjct: 551 ETLKELK 557


>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)

Query: 4 ETMKELK 10
ET+KELK
Sbjct: 551 ETLKELK 557


>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)

Query: 4 ETMKELK 10
ET+KELK
Sbjct: 551 ETLKELK 557


>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean

Query: 4 ETMKELK 10
ET+KELK
Sbjct: 551 ETLKELK 557


>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava

Query: 1 LMDETMKEL 9
+MDE KEL
Sbjct: 1766 MMDEVTKEL 1774


>sp|IBMP_CYLCV|TRANSACTIVATOR/VIROPLASMIN protein|Cestrum yellow leaf curling virus

Query: 1 LMDETMK 7
L+DETMK
Sbjct: 377 LLDETMK 383




18|Sequence|86|95|MKELKAYKSE

>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 ELKAYKSE 10
E KAYK+E
Sbjct: 56 EAKAYKTE 63


>sp|TERM_BPCP1|TERMINAL protein|Streptococcus phage Cp-1 (Bacteriophage Cp-1)

Query: 1 MKELKAYKSE 10
+KE+K Y+SE
Sbjct: 110 VKEVKEYRSE 119




19|Sequence|91|100|AYKSELEEQL

>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)

Query: 1 AYKSELEE 8
AYKS LEE
Sbjct: 494 AYKSYLEE 501




20|Sequence|96|105|LEEQLTPVAE

>sp|Y091_OSHVF|UNCHARACTERIZED protein ORF91|Ostreid herpesvirus 1 (isolate France)

Query: 2 EEQLTPVAE 10
EE+L P+AE
Sbjct: 186 EEELDPLAE 194


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 LEEQLTPVAE 10
LE +LTPV +
Sbjct: 1012 LEMELTPVVQ 1021


>sp|CVC2_VZVD|CAPSID vertex component 2|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 LEEQLTPVAE 10
LEEQLT +A+
Sbjct: 88 LEEQLTRMAK 97


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1 LEEQLTPVAE 10
LE +LTPV +
Sbjct: 1012 LEMELTPVVQ 1021




21|Sequence|101|110|TPVAEETRAR

>sp|SF33K_ADE41|PROTEIN 33K|Human adenovirus F serotype 41

Query: 1 TPVAEETRAR 10
TPVA+E R R
Sbjct: 145 TPVAQELRKR 154


>sp|POLS_DXV96|STRUCTURAL polyprotein|Drosophila x virus (isolate Chung/1996)

Query: 2 PVAEETR 8
P++EETR
Sbjct: 750 PISEETR 756




22|Sequence|106|115|ETRARLSKEL

>sp|TMP_BPHA1|PROBABLE tape measure protein|Halomonas phage phiHAP-1 (isolate -/Gulf

Query: 1 ETRARLSKEL 10
E +ARLS+E+
Sbjct: 72 EKQARLSREM 81




23|Sequence|111|120|LSKELQAAQA

***** No hits found ******


24|Sequence|116|125|QAAQARLGAD

>sp|LTP_SHV21|LARGE tegument protein deneddylase|Saimiriine herpesvirus 2 (strain 11)

Query: 3 AQARLGAD 10
AQARLG D
Sbjct: 1642 AQARLGID 1649


>sp|GI_HHV2H|ENVELOPE glycoprotein I|Human herpesvirus 2 (strain HG52)

Query: 1 QAAQARLGAD 10
+AA ARLGA+
Sbjct: 308 EAAMARLGAE 317


>sp|GI_HHV23|ENVELOPE glycoprotein I|Human herpesvirus 2 (strain 333)

Query: 1 QAAQARLGAD 10
+AA ARLGA+
Sbjct: 308 EAAMARLGAE 317


>sp|GI_HHV11|ENVELOPE glycoprotein I|Human herpesvirus 1 (strain 17)

Query: 1 QAAQARLGAD 10
+AA ARLGA+
Sbjct: 325 EAAMARLGAE 334




25|Sequence|121|130|RLGADMEDVC

>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 1 RLGADMEDVC 10
RLGA D+C
Sbjct: 1635 RLGAIQNDIC 1644


>sp|PORTL_BPTWO|PROBABLE portal protein|Staphylococcus phage Twort (strain DSM

Query: 1 RLGADMEDV 9
RLG D ED+
Sbjct: 13 RLGRDYEDI 21


>sp|POLG_TUMVJ|GENOME polyprotein|Turnip mosaic virus (strain Japanese)

Query: 1 RLGADMED 8
RLGA++ED
Sbjct: 1706 RLGANVED 1713


>sp|PG187_VACCW|B1 kinase|Vaccinia virus (strain Western Reserve)

Query: 1 RLGADMEDV 9
RLGAD++ V
Sbjct: 103 RLGADLDAV 111


>sp|PG187_VACCA|B1 kinase|Vaccinia virus (strain Ankara) (VACV)

Query: 1 RLGADMEDV 9
RLGAD++ V
Sbjct: 103 RLGADLDAV 111


>sp|PG187_MONPV|B1 kinase|Monkeypox virus (MPXV)

Query: 1 RLGADMEDV 9
RLGAD++ V
Sbjct: 103 RLGADLDAV 111


>sp|VP5_EHDV1|OUTER capsid protein VP5|Epizootic hemorrhagic disease virus 1

Query: 1 RLGADMEDV 9
R GAD+++V
Sbjct: 122 RFGADLDEV 130


>sp|V212_FOWPN|PROBABLE serine/threonine-protein kinase FPV212|Fowlpox virus (strain NVSL)

Query: 1 RLGADMEDV 9
RLG D+E++
Sbjct: 117 RLGRDLENI 125


>sp|Y058_OSHVF|UNCHARACTERIZED protein ORF58|Ostreid herpesvirus 1 (isolate France)

Query: 5 DMEDVC 10
D+ED+C
Sbjct: 253 DLEDIC 258


>sp|PAP_PSHV1|DNA polymerase processivity factor|Psittacid herpesvirus 1 (isolate

Query: 3 GADMEDVC 10
GAD ED C
Sbjct: 407 GADEEDSC 414




26|Sequence|126|135|MEDVCGRLVQ

>sp|ABC1_BPP22|ANTI-RECBCD protein 1|Salmonella phage P22 (Bacteriophage P22)

Query: 1 MEDVCGRLV 9
ME VCGR+V
Sbjct: 11 MESVCGRMV 19


>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1

Query: 1 MEDVCGRLV 9
MED C RL+
Sbjct: 625 MEDACDRLI 633


>sp|POL1_GCMV|RNA1 polyprotein|Grapevine chrome mosaic virus (GCMV)

Query: 2 EDVCGRLVQ 10
+DV GRLVQ
Sbjct: 697 QDVIGRLVQ 705


>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2

Query: 1 MEDVCGRLV 9
MED C R V
Sbjct: 627 MEDACDRFV 635


>sp|RDRP_NCBVS|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Nudaurelia capensis beta virus (isolate

Query: 2 EDVCGRL 8
ED CGRL
Sbjct: 1762 EDNCGRL 1768


>sp|MCP_EHV2|MAJOR capsid protein|Equine herpesvirus 2 (strain 86/87)

Query: 1 MEDVCGRLV 9
MED+ GR V
Sbjct: 769 MEDLVGRFV 777


>sp|RDRP_OUMVV|RNA-DEPENDENT RNA polymerase|Ourmia melon virus (isolate Melon/Iran/VE9)

Query: 1 MEDVCGRLV 9
+E CGR+V
Sbjct: 499 LEKACGRIV 507


>sp|UDPE_NPVOP|ECDYSTEROID UDP-glucosyltransferase|Orgyia pseudotsugata multicapsid

Query: 1 MEDVCGRLVQ 10
++D CGR+ Q
Sbjct: 61 VQDECGRVEQ 70




27|Sequence|131|140|GRLVQYRGEV

>sp|POLG_RTSVT|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 1 GRLVQYRG 8
G LVQYRG
Sbjct: 1309 GTLVQYRG 1316


>sp|POLG_RTSVA|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 1 GRLVQYRG 8
G LVQYRG
Sbjct: 1312 GTLVQYRG 1319


>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 2 RLVQYRGEV 10
++VQY GE+
Sbjct: 988 KIVQYAGEI 996


>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 2 RLVQYRGEV 10
++VQY GE+
Sbjct: 989 KIVQYAGEI 997


>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 2 RLVQYRGEV 10
++VQY GE+
Sbjct: 988 KIVQYAGEI 996


>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 2 RLVQYRGEV 10
++VQY GE+
Sbjct: 988 KIVQYAGEI 996


>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 2 RLVQYRGEV 10
++VQY GE+
Sbjct: 988 KIVQYAGEI 996


>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 2 RLVQYRGEV 10
++VQY GE+
Sbjct: 989 KIVQYAGEI 997


>sp|027R_FRG3G|UNCHARACTERIZED protein 027R|Frog virus 3 (isolate Goorha)

Query: 1 GRLVQYRG 8
G LVQ+RG
Sbjct: 53 GTLVQFRG 60


>sp|DPOL_IIV6|DNA polymerase 037L|Invertebrate iridescent virus 6 (IIV-6)

Query: 4 VQYRGEV 10
V YRGEV
Sbjct: 488 VNYRGEV 494




28|Sequence|136|145|YRGEVQAMLG

>sp|DUT_HHV8P|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 8 type P

Query: 1 YRGEVQAML 9
YRGE+Q +L
Sbjct: 84 YRGEIQVIL 92


>sp|DUT_SUHVK|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Suid herpesvirus 1 (strain

Query: 1 YRGEVQAMLG 10
+RGEVQA++
Sbjct: 88 FRGEVQAIVA 97


>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)

Query: 2 RGEVQAM 8
RGEVQA+
Sbjct: 387 RGEVQAL 393


>sp|VG72_ICHVA|UNCHARACTERIZED protein ORF72|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 YRGEVQA 7
YRG++QA
Sbjct: 1065 YRGDIQA 1071


>sp|RPO2_MIMIV|DNA-DIRECTED RNA polymerase subunit 2|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 YRGEVQAMLG 10
+RGE+ M+G
Sbjct: 593 FRGELSRMVG 602




29|Sequence|141|150|QAMLGQSTEE

>sp|RPOLV_BPN4|VIRION DNA-directed RNA polymerase|Enterobacteria phage N4 (Bacteriophage

Query: 3 MLGQSTEE 10
M+GQ TEE
Sbjct: 2895 MVGQRTEE 2902




30|Sequence|146|155|QSTEELRVRL

>sp|RPOL_BPKMV|DNA-DIRECTED RNA polymerase|Pseudomonas phage phiKMV

Query: 3 TEELRVRL 10
TEE+RVRL
Sbjct: 689 TEEVRVRL 696


>sp|Y099B_ABVP|UNCHARACTERIZED protein ORF99b|Acidianus bottle-shaped virus (isolate

Query: 2 STEELRVRL 10
+ EELR+RL
Sbjct: 26 TLEELRIRL 34


>sp|ABL_MLVAB|TYROSINE-PROTEIN kinase transforming protein Abl|Abelson murine leukemia virus

Query: 2 STEELRVR 9
S+EE+RVR
Sbjct: 486 SSEEMRVR 493


>sp|ORF11_HHV8P|PROTEIN ORF11|Human herpesvirus 8 type P

Query: 1 QSTEELRVR 9
++TEE RVR
Sbjct: 211 ETTEECRVR 219




31|Sequence|151|160|LRVRLASHLR

>sp|VCLAP_EHV2|CARD domain-containing protein E10|Equine herpesvirus 2 (strain 86/87)

Query: 1 LRVRLASHLR 10
LRV L SHL+
Sbjct: 32 LRVLLVSHLK 41




32|Sequence|156|165|ASHLRKLRKR

>sp|RDRP_NMV|RNA replication protein|Narcissus mosaic virus (NMV)

Query: 1 ASHLRKLRKR 10
A +LRK+R+R
Sbjct: 1334 ARYLRKMRRR 1343


>sp|POLG_PVYHU|GENOME polyprotein|Potato virus Y (strain Hungarian)

Query: 2 SHLRKLRKR 10
+H+R LRKR
Sbjct: 191 AHMRGLRKR 199


>sp|VL2_HPV40|MINOR capsid protein L2|Human papillomavirus 40

Query: 1 ASHLRKLRKR 10
A +LRK RKR
Sbjct: 449 AYYLRKRRKR 458


>sp|NS1_AEDEV|INITIATOR protein NS1|Aedes densonucleosis virus (strain GKV

Query: 2 SHLRKLRKR 10
SH+R +R+R
Sbjct: 199 SHIRSVRRR 207


>sp|MVP_PVYHU|P3N-PIPO polyprotein|Potato virus Y (strain Hungarian)

Query: 1 ASHLRKLRKR 10
+H+R LRKR
Sbjct: 190 TAHMRGLRKR 199


>sp|V16K_TRVTC|16 kDa protein|Tobacco rattle virus (strain TCM)

Query: 2 SHLRKLRKR 10
SHL K RKR
Sbjct: 69 SHLEKCRKR 77




33|Sequence|161|170|KLRKRLLRDA

>sp|POL1_CNSV|RNA1 polyprotein|Cycas necrotic stunt virus (CNSV)

Query: 1 KLRKRLLRD 9
KLR RLL+D
Sbjct: 220 KLRARLLQD 228


>sp|F11_FOWPN|PROTEIN F11 homolog|Fowlpox virus (strain NVSL) (FPV)

Query: 1 KLRKRLLRDA 10
KLR+RLL+ A
Sbjct: 321 KLRERLLKAA 330


>sp|RDRP_SJNNV|RNA-DIRECTED RNA polymerase|Striped jack nervous necrosis virus

Query: 3 RKRLLRDA 10
RK++LRDA
Sbjct: 45 RKQILRDA 52


>sp|RDRP_AHNNV|RNA-DIRECTED RNA polymerase|Atlantic halibut nervous necrosis virus

Query: 3 RKRLLRDA 10
RK+++RDA
Sbjct: 45 RKKIIRDA 52




34|Sequence|166|175|LLRDADDLQK

>sp|FUS_SENDO|FUSION glycoprotein F0|Sendai virus (strain Ohita) (SeV)

Query: 2 LRDADDLQK 10
LRDA DLQ+
Sbjct: 89 LRDALDLQE 97


>sp|FUS_SENDA|FUSION glycoprotein F0|Sendai virus (strain Hamamatsu) (SeV)

Query: 2 LRDADDLQK 10
LRDA DLQ+
Sbjct: 89 LRDALDLQE 97


>sp|FUS_SENDH|FUSION glycoprotein F0|Sendai virus (strain Harris) (SeV)

Query: 2 LRDADDLQK 10
LRDA DLQ+
Sbjct: 89 LRDALDLQE 97


>sp|FUS_SENDZ|FUSION glycoprotein F0|Sendai virus (strain Z) (SeV)

Query: 2 LRDADDLQK 10
LRDA DLQ+
Sbjct: 89 LRDALDLQE 97


>sp|FUS_SENDF|FUSION glycoprotein F0|Sendai virus (strain Fushimi) (SeV)

Query: 2 LRDADDLQK 10
LRDA DLQ+
Sbjct: 89 LRDALDLQE 97




35|Sequence|171|180|DDLQKRLAVY

>sp|NCAP_BCHK5|NUCLEOPROTEIN coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 2 DLQKRLA 8
DLQKRLA
Sbjct: 217 DLQKRLA 223


>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)

Query: 1 DDLQKRLAVY 10
+DLQKR VY
Sbjct: 168 EDLQKRDIVY 177


>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 DDLQKRLAVY 10
+DLQKR VY
Sbjct: 168 EDLQKRDIVY 177


>sp|POLG_BCMNN|GENOME polyprotein|Bean common mosaic necrosis virus

Query: 1 DDLQKRLAVY 10
DD+Q+RL +
Sbjct: 2627 DDIQERLVFF 2636




36|Sequence|176|185|RLAVYQAGAR

>sp|TUBE1_BPK34|TAIL tubular protein A|Klebsiella phage KP34 (Bacteriophage KP34)

Query: 1 RLAVYQAGA 9
+LAVY AG+
Sbjct: 71 QLAVYDAGS 79




37|Sequence|181|190|QAGAREGAER

>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 QAGAREGAER 10
++ REGAER
Sbjct: 460 RSSTREGAER 469


>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 QAGAREGAER 10
++ REGAER
Sbjct: 460 RSSTREGAER 469


>sp|GH_HHV8P|ENVELOPE glycoprotein H|Human herpesvirus 8 type P

Query: 1 QAGAREGA 8
Q GAR+GA
Sbjct: 401 QLGARDGA 408




38|Sequence|186|195|EGAERGLSAI

>sp|PA_THOGV|POLYMERASE acidic protein|Thogoto virus (isolate SiAr 126)

Query: 1 EGAERGLS 8
EGA+RG++
Sbjct: 532 EGAQRGMT 539




39|Sequence|191|200|GLSAIRERLG

>sp|NEF_HV1A2|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 GLSAIRERL 9
G SAIRER+
Sbjct: 12 GWSAIRERM 20


>sp|NEF_HV1S1|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 GLSAIRERL 9
G SA+RER+
Sbjct: 11 GWSAVRERM 19


>sp|DPOL_BPSPB|DNA-DIRECTED DNA polymerase|Bacillus phage SPbeta (Bacillus phage

Query: 2 LSAIRERLG 10
L A+RER G
Sbjct: 482 LKALRERFG 490




40|Sequence|196|205|RERLGPLVEQ

>sp|LTP_EHV2|LARGE tegument protein deneddylase|Equine herpesvirus 2 (strain 86/87)

Query: 2 ERLGPLVEQ 10
+RLGPLVE+
Sbjct: 2479 KRLGPLVEK 2487


>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RERLGPLVE 9
R+R GPLV+
Sbjct: 747 RDRSGPLVD 755


>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RERLGPLVE 9
R+R GPLV+
Sbjct: 729 RDRSGPLVD 737


>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 RERLGPLV 8
R+R GPLV
Sbjct: 739 RDRSGPLV 746




41|Sequence|201|210|PLVEQGRVRA

>sp|TOPS_BPT4|DNA topoisomerase small subunit|Enterobacteria phage T4

Query: 2 LVEQGRVR 9
L EQGR+R
Sbjct: 64 LFEQGRIR 71


>sp|ANT_BPP1|ANTIREPRESSOR protein 1|Escherichia phage P1 (Bacteriophage P1)

Query: 2 LVEQGRVR 9
L+EQGR+R
Sbjct: 62 LIEQGRLR 69


>sp|041R_FRG3G|UNCHARACTERIZED protein 041R|Frog virus 3 (isolate Goorha)

Query: 1 PLVEQGRV 8
PLVE GRV
Sbjct: 298 PLVEMGRV 305


>sp|UL96_GPCMV|PROTEIN GP96|Guinea pig cytomegalovirus (strain 22122)

Query: 1 PLVEQGRVRA 10
P VEQ R+RA
Sbjct: 33 PSVEQQRIRA 42


>sp|CAPSD_AQRVG|INNER capsid protein VP3|Aquareovirus G (isolate American grass

Query: 1 PLVEQGRVR 9
PLV GRVR
Sbjct: 1066 PLVVAGRVR 1074


>sp|TEG7_PSHV1|TEGUMENT protein UL51|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 PLVEQGRVRA 10
P+V++GRV A
Sbjct: 47 PVVDEGRVTA 56




42|Sequence|206|215|GRVRAATVGS

***** No hits found ******


43|Sequence|211|220|ATVGSLAGQP

>sp|CAP6_ADES1|PRE-PROTEIN VI|Snake adenovirus serotype 1 (SnAdV-1)

Query: 2 TVGSLAGQ 9
VGSLAGQ
Sbjct: 76 NVGSLAGQ 83


>sp|DIT_BPT5|DISTAL tail protein pb9|Escherichia phage T5 (Enterobacteria phage

Query: 2 TVGSLAGQP 10
T G+L GQP
Sbjct: 113 TNGTLTGQP 121




44|Sequence|216|225|LAGQPLQERA

>sp|REPA_WDVS|REPLICATION-ASSOCIATED protein A|Wheat dwarf virus (isolate Sweden)

Query: 2 AGQPLQER 9
AGQP QER
Sbjct: 251 AGQPEQER 258


>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)

Query: 2 AGQPLQERA 10
+G+PLQE A
Sbjct: 1053 SGRPLQETA 1061


>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain

Query: 2 AGQPLQERA 10
+G+PLQE A
Sbjct: 1053 SGRPLQETA 1061


>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)

Query: 2 AGQPLQERA 10
+G+PLQE A
Sbjct: 1044 SGRPLQETA 1052




45|Sequence|221|230|LQERAQAWGE

>sp|POLG_PPVRA|GENOME polyprotein|Plum pox potyvirus (strain Rankovic)

Query: 1 LQERAQAWGE 10
LQE QAW E
Sbjct: 925 LQELEQAWKE 934


>sp|POLG_PPVD|GENOME polyprotein|Plum pox potyvirus (strain D)

Query: 1 LQERAQAWGE 10
LQE QAW E
Sbjct: 926 LQELEQAWKE 935


>sp|POLG_PPVNA|GENOME polyprotein|Plum pox potyvirus (isolate NAT)

Query: 1 LQERAQAWGE 10
LQE QAW E
Sbjct: 925 LQELEQAWKE 934


>sp|POLG_PPVSK|GENOME polyprotein|Plum pox potyvirus (strain SK

Query: 1 LQERAQAWGE 10
LQE QAW E
Sbjct: 925 LQELEQAWRE 934


>sp|PHOSP_DMSVA|PHOSPHOPROTEIN melanogaster sigma virus (isolate

Query: 1 LQERAQAW 8
L+ERA AW
Sbjct: 14 LRERAAAW 21


>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)

Query: 2 QERAQAWG 9
QER WG
Sbjct: 1052 QERTSRWG 1059


>sp|GP_BUNGE|ENVELOPMENT polyprotein|Bunyavirus germiston

Query: 2 QERAQAWG 9
QER WG
Sbjct: 1056 QERTSRWG 1063


>sp|ENV_SIVSP|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate

Query: 1 LQERAQAW 8
LQE AQAW
Sbjct: 840 LQEAAQAW 847


>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)

Query: 1 LQERAQAWGE 10
LQ R+Q W E
Sbjct: 227 LQTRSQTWLE 236


>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French

Query: 1 LQERAQAWGE 10
LQ R+Q W E
Sbjct: 227 LQTRSQTWLE 236


>sp|POL_FENV1|POL polyprotein|Feline endogenous virus ECE1

Query: 1 LQERAQAWGE 10
LQ+ QAW E
Sbjct: 1 LQDFPQAWAE 10


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 2 QERAQAWGE 10
Q+R + WGE
Sbjct: 3414 QQRFENWGE 3422


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 1 LQERAQAWGE 10
LQ R+Q W E
Sbjct: 227 LQTRSQTWLE 236


>sp|POL_BAEVM|GAG-POL polyprotein|Baboon endogenous virus (strain M7)

Query: 1 LQERAQAWGE 10
LQ+ QAW E
Sbjct: 682 LQDFPQAWAE 691




46|Sequence|226|235|QAWGERLRAR

>sp|VG46_ICHVA|PROBABLE major glycoprotein|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 QAWGERLR 8
Q WG R+R
Sbjct: 502 QLWGRRVR 509


>sp|RPC2_BPP22|REPRESSOR protein C2|Salmonella phage P22 (Bacteriophage P22)

Query: 1 QAWGERLRAR 10
Q GER+RAR
Sbjct: 4 QLMGERIRAR 13


>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human

Query: 2 AWGERL 7
AWGE+L
Sbjct: 736 AWGEKL 741


>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human

Query: 2 AWGERL 7
AWGE+L
Sbjct: 736 AWGEKL 741


>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human

Query: 3 WGERL 7
WGERL
Sbjct: 740 WGERL 744


>sp|RDRP_ACLSA|RNA-DIRECTED RNA polymerase|Apple chlorotic leaf spot virus

Query: 1 QAWGER 6
Q WGER
Sbjct: 422 QIWGER 427




47|Sequence|231|240|RLRARMEEMG

>sp|Y06E_BPT4|UNCHARACTERIZED 20.7 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 LRARMEEMG 10
+RAR++E+G
Sbjct: 95 MRARVKELG 103




48|Sequence|236|245|MEEMGSRTRD

>sp|GPG_BPMU|PUTATIVE capsid assembly protein G|Escherichia phage Mu (Bacteriophage Mu)

Query: 1 MEEMGSRTRD 10
++E+G+ TRD
Sbjct: 18 LDELGTVTRD 27




49|Sequence|241|250|SRTRDRLDEV

>sp|CEP2_HHV11|CYTOPLASMIC envelopment protein 2|Human herpesvirus 1 (strain 17)

Query: 3 TRDRLDEV 10
TRDR+D++
Sbjct: 31 TRDRVDDL 38




50|Sequence|246|255|RLDEVKEQVA

>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 1 RLDEVKEQV 9
+LDEVKEQ+
Sbjct: 1902 KLDEVKEQL 1910


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 1 RLDEVKEQV 9
+LDE+KEQ+
Sbjct: 1942 KLDEIKEQL 1950


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 1 RLDEVKEQV 9
+LDE+KEQ+
Sbjct: 1941 KLDEIKEQL 1949


>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)

Query: 3 DEVKEQV 9
DEVKEQ+
Sbjct: 1025 DEVKEQI 1031


>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)

Query: 3 DEVKEQV 9
DE+KEQ+
Sbjct: 1033 DEIKEQI 1039


>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)

Query: 3 DEVKEQV 9
DE+KEQ+
Sbjct: 1024 DEIKEQI 1030


>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 1 RLDEVKEQV 9
+LDE KEQ+
Sbjct: 1902 KLDEAKEQL 1910


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 1 RLDEVKEQV 9
+LDE KEQ+
Sbjct: 1941 KLDETKEQL 1949


>sp|RPOA_PRRSV|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 LDEVKEQV 9
LDEV EQV
Sbjct: 3178 LDEVLEQV 3185


>sp|RPOA_PRRSR|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 LDEVKEQV 9
LDEV EQV
Sbjct: 3207 LDEVLEQV 3214


>sp|RPOA_PRRSB|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 LDEVKEQV 9
LDEV EQV
Sbjct: 3208 LDEVLEQV 3215


>sp|RPOA_PRRS1|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 LDEVKEQV 9
LDEV EQV
Sbjct: 3208 LDEVLEQV 3215


>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P

Query: 2 LDEVKEQVA 10
LDEVK+Q A
Sbjct: 1504 LDEVKKQRA 1512


>sp|Y167_ATV|UNCHARACTERIZED protein ORF167|Acidianus two-tailed virus (ATV)

Query: 1 RLDEVKEQVA 10
R++EVKE+ A
Sbjct: 107 RIEEVKEKEA 116




51|Sequence|251|260|KEQVAEVRAK

***** No hits found ******


52|Sequence|256|265|EVRAKLEEQA

>sp|POLG_RHDVF|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 2 VRAKLEEQ 9
+RAKLEE+
Sbjct: 202 IRAKLEEE 209


>sp|POLG_RHDVB|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 2 VRAKLEEQ 9
+RAKLEE+
Sbjct: 202 IRAKLEEE 209


>sp|POLG_RHDVA|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 2 VRAKLEEQ 9
+RAKLEE+
Sbjct: 202 IRAKLEEE 209


>sp|POLG_RHDV3|GENOME polyprotein|Rabbit hemorrhagic disease virus (strain

Query: 2 VRAKLEEQ 9
+RAKLEE+
Sbjct: 202 IRAKLEEE 209


>sp|RDRP_PMVK|RNA-DIRECTED RNA polymerase|Panicum mosaic virus (strain United

Query: 1 EVRAKLEEQA 10
EV+A+LEE++
Sbjct: 248 EVKARLEEES 257


>sp|Y066_NPVOP|UNCHARACTERIZED 98.6 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 EVRAKLEEQ 9
E+RA+LE+Q
Sbjct: 555 EIRARLEQQ 563


>sp|CVC2_HHV6Z|CAPSID vertex component 2|Human herpesvirus 6B (strain Z29)

Query: 2 VRAKLEEQA 10
+RA++E+QA
Sbjct: 484 IRAQMEQQA 492


>sp|CVC2_HHV6U|CAPSID vertex component 2|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 VRAKLEEQA 10
+RA++E+QA
Sbjct: 484 IRAQMEQQA 492


>sp|DPOL_BPR69|DNA-DIRECTED DNA polymerase|Escherichia phage RB69 (Bacteriophage RB69)

Query: 1 EVRAKLEEQA 10
E+ AKL+EQ
Sbjct: 165 EIAAKLQEQG 174




53|Sequence|261|270|LEEQAQQIRL

>sp|Y022_OSHVF|UNCHARACTERIZED protein ORF22|Ostreid herpesvirus 1 (isolate France)

Query: 1 LEEQAQQIR 9
LEEQ Q+IR
Sbjct: 918 LEEQNQEIR 926




54|Sequence|266|275|QQIRLQAEAF

***** No hits found ******


55|Sequence|271|280|QAEAFQARLK

***** No hits found ******


56|Sequence|276|285|QARLKSWFEP

>sp|VF315_ASFWA|UNCHARACTERIZED protein C315R|African swine fever virus (isolate

Query: 2 ARLKSWFEP 10
+LK WFEP
Sbjct: 45 GQLKDWFEP 53


>sp|TFIIB_ASFP4|INITIATION factor TFIIB homolog|African swine fever virus (isolate

Query: 2 ARLKSWFEP 10
+LK WFEP
Sbjct: 45 GQLKDWFEP 53


>sp|TFIIB_ASFM2|INITIATION factor TFIIB homolog|African swine fever virus (isolate

Query: 2 ARLKSWFEP 10
+LK WFEP
Sbjct: 45 GQLKDWFEP 53


>sp|TFIIB_ASFK5|INITIATION factor TFIIB homolog|African swine fever virus (isolate

Query: 2 ARLKSWFEP 10
+LK WFEP
Sbjct: 46 GQLKDWFEP 54


>sp|TFIIB_ASFB7|INITIATION factor TFIIB homolog|African swine fever virus (strain

Query: 2 ARLKSWFEP 10
+LK WFEP
Sbjct: 45 GQLKDWFEP 53


>sp|PORTL_BPHK7|PORTAL protein|Enterobacteria phage HK97 (Bacteriophage HK97)

Query: 2 ARLKSWF 8
ARLKSWF
Sbjct: 18 ARLKSWF 24


>sp|POL1_GCMV|RNA1 polyprotein|Grapevine chrome mosaic virus (GCMV)

Query: 2 ARLKSWFE 9
AR+KSWF+
Sbjct: 485 ARVKSWFD 492


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 4 LKSWFEP 10
+K+WF+P
Sbjct: 4221 MKNWFDP 4227


>sp|NSP1B_ROTGI|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate RVB/Rat/United

Query: 3 RLKSWFEP 10
RLK W+ P
Sbjct: 165 RLKRWYNP 172


>sp|TRM3_EHV1V|TRIPARTITE terminase subunit 3|Equine herpesvirus 1 (strain V592)

Query: 2 ARLKSWF 8
ARL+ WF
Sbjct: 304 ARLRQWF 310


>sp|TRM3_EHV1B|TRIPARTITE terminase subunit 3|Equine herpesvirus 1 (strain Ab4p)

Query: 2 ARLKSWF 8
ARL+ WF
Sbjct: 304 ARLRQWF 310


>sp|TSP_BPBMU|TAIL sheath protein|Burkholderia phage BcepMu (isolate -/United

Query: 4 LKSWFEP 10
K+WF+P
Sbjct: 425 FKAWFDP 431


>sp|Y011_NPVOP|UNCHARACTERIZED 37.2 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 2 ARLKSWF 8
ARL +WF
Sbjct: 79 ARLSAWF 85


>sp|UL142_HCMVM|MEMBRANE glycoprotein UL142|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4 LKSWFEP 10
L+SWF P
Sbjct: 75 LESWFTP 81


>sp|VP09_BPAPS|PUTATIVE protein p9|Acyrthosiphon pisum secondary endosymbiont phage

Query: 5 KSWFEP 10
++WFEP
Sbjct: 271 QNWFEP 276


>sp|VG26_BPMD2|MINOR tail protein Gp26|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 2 ARLKSWFE 9
++KSWF+
Sbjct: 578 GKIKSWFD 585


>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 5 KSWFEP 10
K WF+P
Sbjct: 4179 KDWFDP 4184


>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus

Query: 5 KSWFEP 10
K WF+P
Sbjct: 4154 KDWFDP 4159


>sp|RPOL_BPT7|T7 RNA polymerase|Escherichia phage T7 (Bacteriophage T7)

Query: 2 ARLKSWFE 9
AR+ WFE
Sbjct: 83 ARINDWFE 90


>sp|RDRP_FXMV|RNA replication protein|Foxtail mosaic virus

Query: 4 LKSWFEP 10
LK+WF P
Sbjct: 362 LKAWFRP 368


>sp|ENV_SIVG1|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus agm.grivet

Query: 1 QARLKSW 7
QARL SW
Sbjct: 600 QARLNSW 606


>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1 QARLKSW 7
QARL SW
Sbjct: 589 QARLNSW 595


>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1 QARLKSW 7
QARL SW
Sbjct: 581 QARLNSW 587


>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1 QARLKSW 7
QARL SW
Sbjct: 581 QARLNSW 587


>sp|ENV_SIVVT|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus agm.vervet

Query: 1 QARLKSW 7
QARL SW
Sbjct: 614 QARLNSW 620


>sp|VP2_AHSV3|OUTER capsid protein VP2|African horse sickness virus 3

Query: 1 QARLKSWF 8
+ ++KSWF
Sbjct: 914 ELKIKSWF 921




57|Sequence|281|290|SWFEPLVEDM

>sp|NCAP_BCHK9|NUCLEOPROTEIN coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 1 SWFEPLVE 8
SWF PLV+
Sbjct: 65 SWFAPLVQ 72


>sp|R1AB_LIYV9|REPLICASE polyprotein 1ab|Lettuce infectious yellows virus (isolate

Query: 2 WFEPLVEDM 10
W+EP++ D+
Sbjct: 2014 WYEPILPDL 2022


>sp|RDRP_AHSV|RNA-DIRECTED RNA polymerase|African horse sickness virus (AHSV)

Query: 1 SWFEPLVE 8
+W EPLV+
Sbjct: 954 AWMEPLVK 961


>sp|L_RYSV|RNA-DIRECTED RNA polymerase L|Rice yellow stunt virus (RYSV)

Query: 3 FEPLVEDM 10
+EPL+ED+
Sbjct: 964 YEPLIEDV 971


>sp|RDRP_BOTVX|RNA replication protein|Botrytis virus X (isolate Botrytis

Query: 2 WFEPLVE 8
+FEPLVE
Sbjct: 931 FFEPLVE 937


>sp|SPANU_BPT1|U-SPANIN phage T1 (Bacteriophage T1)

Query: 1 SWFEPLV 7
SW++P+V
Sbjct: 103 SWYDPVV 109


>sp|VG53_ICHVA|UNCHARACTERIZED protein ORF53|Ictalurid herpesvirus 1 (strain Auburn)

Query: 3 FEPLVED 9
FEPL+E+
Sbjct: 29 FEPLIEE 35


>sp|Y03C_BPT4|UNCHARACTERIZED 10.3 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 WFEPL-VED 9
WFEPL VED
Sbjct: 32 WFEPLEVED 40


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 2 WFEPLVED 9
W++P+V D
Sbjct: 3188 WYDPVVFD 3195


>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 2 WFEPLVED 9
W++P+V D
Sbjct: 3186 WYDPVVFD 3193


>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 2 WFEPLVED 9
W++P+V D
Sbjct: 3186 WYDPVVFD 3193


>sp|R1A_IBVM|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 2 WFEPLVED 9
W++P+V D
Sbjct: 3188 WYDPVVFD 3195


>sp|R1A_IBVBC|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 2 WFEPLVED 9
W++P+V D
Sbjct: 3186 WYDPVVFD 3193


>sp|R1A_IBVB|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 2 WFEPLVED 9
W++P+V D
Sbjct: 3186 WYDPVVFD 3193


>sp|RDRP_FXMV|RNA replication protein|Foxtail mosaic virus

Query: 1 SWFEPLVEDM 10
+WF P+V +
Sbjct: 364 AWFRPMVAKL 373


>sp|013R_FRG3G|UNCHARACTERIZED protein 013R|Frog virus 3 (isolate Goorha)

Query: 1 SWFEPLVED 9
+W+ PL D
Sbjct: 11 TWYSPLASD 19


>sp|VG341_BPMD2|GENE 34.1 protein|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 1 SWFEPLVED 9
SW PLV D
Sbjct: 45 SWMVPLVID 53


>sp|HEPA_EHV2|DNA helicase/primase complex-associated protein|Equine herpesvirus 2

Query: 2 WFEPLVEDM 10
WF +VED+
Sbjct: 177 WFRGMVEDV 185




58|Sequence|286|295|LVEDMQRQWA

>sp|CVC2_PSHV1|CAPSID vertex component 2|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 LVEDMQRQWA 10
L ED++R+W
Sbjct: 298 LQEDVRREWG 307


>sp|BDLF2_EBVG|PROTEIN BDLF2|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 LVEDMQRQWA 10
LV+DMQR A
Sbjct: 316 LVQDMQRVLA 325


>sp|BDLF2_EBVB9|PROTEIN BDLF2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 LVEDMQRQWA 10
LV+DMQR A
Sbjct: 316 LVQDMQRVLA 325


>sp|BDLF2_EBVA8|PROTEIN BDLF2|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 LVEDMQRQWA 10
LV+DMQR A
Sbjct: 316 LVQDMQRVLA 325


>sp|CAPSD_BPSAV|MAJOR capsid protein|Salmonella phage ViI

Query: 1 LVEDMQRQW 9
+ E+M++QW
Sbjct: 6 VTEEMRKQW 14


>sp|NS1_I96A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Goose/Guangdong/1/1996

Query: 2 VEDMQRQW 9
+E+M R+W
Sbjct: 95 IEEMSREW 102


>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 VEDMQRQW 9
V +MQR W
Sbjct: 3 VREMQRNW 10


>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 VEDMQRQW 9
V +MQR W
Sbjct: 3 VREMQRNW 10


>sp|VE2_HPV1|REGULATORY protein E2|Human papillomavirus type 1 (Human

Query: 1 LVEDMQRQW 9
L+ED +QW
Sbjct: 25 LIEDQIKQW 33




59|Sequence|291|300|QRQWAGLVEK

>sp|RL11_HCMVM|MEMBRANE glycoprotein RL11|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 QRQWAGL 7
+RQW+GL
Sbjct: 175 KRQWSGL 181


>sp|IR11_HCMVA|VIRAL Fc-gamma receptor-like protein IR11|Human cytomegalovirus (strain

Query: 1 QRQWAGL 7
+RQW+GL
Sbjct: 175 KRQWSGL 181


>sp|PB2_ISAV8|POLYMERASE basic protein 2|Infectious salmon anemia virus (isolate

Query: 3 QWAGLVEK 10
WAGL+EK
Sbjct: 47 HWAGLMEK 54


Query: 4 WAGLVEK 10
W+GL+EK
Sbjct: 376 WSGLMEK 382


>sp|Y044_OSHVF|UNCHARACTERIZED protein ORF44|Ostreid herpesvirus 1 (isolate France)

Query: 1 QRQWAGLVEK 10
QRQ+ GLV++
Sbjct: 228 QRQYDGLVDE 237


>sp|POL2_GFLVN|RNA2 polyprotein|Grapevine fanleaf virus (isolate NW)

Query: 2 RQWAGLVE 9
R W GLV+
Sbjct: 243 RAWVGLVD 250




60|Sequence|296|305|GLVEKVQAAV

>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)

Query: 3 VEKVQAA 9
VEKVQAA
Sbjct: 1997 VEKVQAA 2003


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)

Query: 3 VEKVQAA 9
VEKVQAA
Sbjct: 1997 VEKVQAA 2003




61|Sequence|301|310|VQAAVGTSAA

***** No hits found ******


62|Sequence|306|317|GTSAAPVPSDNH

>sp|GD_EHV1K|ENVELOPE glycoprotein D|Equine herpesvirus 1 (strain Kentucky

Query: 4 AAPVPSDNH 12
A PVP DNH
Sbjct: 326 ARPVPPDNH 334


>sp|GD_EHV1D|ENVELOPE glycoprotein D|Equine herpesvirus 1 (strain Kentucky

Query: 4 AAPVPSDNH 12
A PVP DNH
Sbjct: 326 ARPVPPDNH 334


>sp|GD_EHV1B|ENVELOPE glycoprotein D|Equine herpesvirus 1 (strain Ab4p)

Query: 4 AAPVPSDNH 12
A PVP DNH
Sbjct: 326 ARPVPPDNH 334


>sp|GD_EHV1A|ENVELOPE glycoprotein D|Equine herpesvirus 1 (strain AB1)

Query: 4 AAPVPSDNH 12
A PVP DNH
Sbjct: 276 ARPVPPDNH 284


>sp|Y01A_BPT4|UNCHARACTERIZED 12.1 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 5 APVPSDNH 12
APVP D H
Sbjct: 17 APVPLDEH 24


>sp|CAPSD_MYRV9|INNER capsid protein VP2|Cryphonectria parasitica mycoreovirus 1 (strain

Query: 3 SAAPVPSDN 11
+A P+PSDN
Sbjct: 121 AARPIPSDN 129


>sp|VE2_HPV48|REGULATORY protein E2|Human papillomavirus type 48

Query: 1 GTSAAPVPSD 10
G+ +AP PS+
Sbjct: 280 GSDSAPTPSE 289


>sp|SPIKE_CVPRM|SPIKE glycoprotein|Porcine respiratory coronavirus (strain RM4)

Query: 1 GTSAAPVPSDN 11
G S VPSDN
Sbjct: 438 GDSIVGVPSDN 448


>sp|SPIKE_CVPR8|SPIKE glycoprotein|Porcine respiratory coronavirus (strain 86/137004

Query: 1 GTSAAPVPSDN 11
G S VPSDN
Sbjct: 438 GDSIVGVPSDN 448


>sp|Y077_OSHVF|UNCHARACTERIZED protein ORF77|Ostreid herpesvirus 1 (isolate France)

Query: 3 SAAPVPSDNH 12
S P+P D+H
Sbjct: 967 SEDPIPMDSH 976


>sp|ANT_BPP1|ANTIREPRESSOR protein 1|Escherichia phage P1 (Bacteriophage P1)

Query: 2 TSAAPVPSDN 11
TSA P P+ N
Sbjct: 98 TSATPAPAVN 107


>sp|GC_EHV4|ENVELOPE glycoprotein C|Equine herpesvirus 4 (strain 1942)

Query: 1 GTSAAPVPSDNH 12
GT A P PS H
Sbjct: 73 GTEATPTPSHPH 84


>sp|GP_SFTS|ENVELOPMENT polyprotein|Dabie bandavirus (Severe fever with

Query: 1 GTSAAPVPSD 10
GTS+ +PSD
Sbjct: 161 GTSSGLLPSD 170






THE END