1|Sequence|1|10|MVLLRVLILL
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 MVLLRVLI 8
M+LL++LI
Sbjct: 513 MILLKILI 520
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 1 MVLLRVLI 8
M+LL++LI
Sbjct: 513 MILLKILI 520
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 1 MVLLRVLI 8
M+LL++LI
Sbjct: 513 MILLKILI 520
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 MVLLRVLI 8
M+LL++LI
Sbjct: 513 MILLKILI 520
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 2 VLLRVLIL 9
+++RVL+L
Sbjct: 1994 IIIRVLVL 2001
2|Sequence|6|15|VLILLLSWAA
>sp|HEMA_I76A4|HEMAGGLUTININ A virus (strain A/Duck/Alberta/35/1976
Query: 2 LILLLSWAA 10
L+LL+SW A
Sbjct: 541 LVLLVSWGA 549
>sp|PG003_VAR67|ANKYRIN repeat protein OPG003|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 VLILLLSW 8
+LI+LL+W
Sbjct: 278 ILIMLLNW 285
>sp|PG003_MONPV|ANKYRIN repeat protein OPG003|Monkeypox virus (MPXV)
Query: 1 VLILLLSW 8
+LI+LL+W
Sbjct: 281 ILIMLLNW 288
>sp|UL33_HCMVA|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain AD169)
Query: 2 LILLLSWAA 10
+ILLL+W A
Sbjct: 148 MILLLTWLA 156
>sp|C20L_VACCC|UNCHARACTERIZED protein C20L|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VLILLLSW 8
+LI+LL+W
Sbjct: 49 ILIMLLNW 56
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 LLLSWAA 10
LLLSW +
Sbjct: 5133 LLLSWES 5139
>sp|UL33_HCMVM|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain Merlin)
Query: 2 LILLLSWAA 10
+ILLL+W A
Sbjct: 149 IILLLTWFA 157
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 VLILLLSW 8
VLIL SW
Sbjct: 1943 VLILKYSW 1950
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 VLILLLSW 8
VLIL SW
Sbjct: 1943 VLILKYSW 1950
3|Sequence|11|20|LSWAAGMGGQ
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 LSWAAGMGGQ 10
LSWA +GG+
Sbjct: 1147 LSWAPLLGGR 1156
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 LSWAAGMGGQ 10
LSWA +GG+
Sbjct: 1147 LSWAPLLGGR 1156
>sp|UL11P_HCMVM|PROTEIN UL11|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LSWAAGMGGQ 10
+ W+ G GGQ
Sbjct: 57 VRWSYGPGGQ 66
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 WAAGMG 8
W AGMG
Sbjct: 242 WNAGMG 247
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 WAAGMG 8
W AGMG
Sbjct: 240 WNAGMG 245
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 2 SWAAGMGGQ 10
+WA+ MGG+
Sbjct: 1002 NWASLMGGK 1010
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 2 SWAAGMGGQ 10
+WA+ MGG+
Sbjct: 1002 NWASLMGGK 1010
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 2 SWAAGMGGQ 10
+WA+ MGG+
Sbjct: 1002 NWASLMGGK 1010
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 3 WAAGMGGQ 10
W GMG Q
Sbjct: 695 WGLGMGHQ 702
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 2 SWAAGMG 8
+W GMG
Sbjct: 411 TWQTGMG 417
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LSWAAGMG 8
++W AG G
Sbjct: 877 MTWPAGTG 884
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LSWAAGMG 8
++W AG G
Sbjct: 877 MTWPAGTG 884
>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 AAGMGG 9
+AGMGG
Sbjct: 1021 SAGMGG 1026
>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)
Query: 4 AAGMGG 9
+AGMGG
Sbjct: 1020 SAGMGG 1025
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 SWAAGMGGQ 10
SWA +GG+
Sbjct: 1118 SWAHILGGR 1126
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 LSWAAGMGGQ 10
L W +G GG
Sbjct: 495 LPWQSGTGGH 504
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 3 WAAGM 7
W+AGM
Sbjct: 454 WSAGM 458
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 1 LSWAAGMG 8
L W AG G
Sbjct: 953 LGWIAGSG 960
>sp|VL2_HPV24|MINOR capsid protein L2|Human papillomavirus 24
Query: 4 AAGMGGQ 10
A+G GGQ
Sbjct: 209 ASGAGGQ 215
>sp|U10_HHV6Z|PROTEIN U10|Human herpesvirus 6B (strain Z29)
Query: 1 LSWAAGMG 8
++W++G G
Sbjct: 16 VTWSSGFG 23
>sp|U10_HHV6U|U10 protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LSWAAGMG 8
++W++G G
Sbjct: 16 VTWSSGFG 23
>sp|U10_HHV6H|PROTEIN U10|Human herpesvirus 6B (HHV-6 variant
Query: 1 LSWAAGMG 8
++W++G G
Sbjct: 16 VTWSSGFG 23
>sp|UL33_HCMVA|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain AD169)
Query: 1 LSWAAGM 7
L+W AG+
Sbjct: 152 LTWLAGL 158
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 1 LSWAAGMGG 9
L W +G GG
Sbjct: 500 LPWQSGSGG 508
>sp|BILF2_EBVB9|GLYCOPROTEIN BILF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LSWAAGMG 8
L W AG G
Sbjct: 232 LGWLAGWG 239
>sp|UL04_HCMVT|EARLY glycoprotein GP48|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 LSWAAGMG 8
LSW G G
Sbjct: 71 LSWLLGSG 78
>sp|NCAP_PI1HW|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 4 AAGMGG 9
AAG+GG
Sbjct: 518 AAGIGG 523
4|Sequence|16|25|GMGGQYGNPL
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 2 MGGQYGNPL 10
MGG +GN L
Sbjct: 300 MGGTFGNWL 308
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 2 MGGQYGNPL 10
MGG +GN L
Sbjct: 303 MGGTFGNWL 311
>sp|VL2_HPV63|MINOR capsid protein L2|Human papillomavirus type 63
Query: 5 QYGNPL 10
QY NPL
Sbjct: 168 QYNNPL 173
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 GMGGQYGNPL 10
G GG G+PL
Sbjct: 588 GNGGAGGSPL 597
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 GMGGQYGNPL 10
G GG G+PL
Sbjct: 588 GNGGAGGSPL 597
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 5 QYGNP 9
Q+GNP
Sbjct: 919 QFGNP 923
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GMGGQYGN 8
G+GG GN
Sbjct: 313 GIGGTAGN 320
>sp|IR05_HCMVA|UNCHARACTERIZED protein IRL5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 MGGQYG 7
MGG YG
Sbjct: 10 MGGWYG 15
>sp|BDLF2_EBVB9|PROTEIN BDLF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 GGQYGNPL 10
GGQ G P+
Sbjct: 126 GGQRGAPI 133
>sp|BDLF2_EBVA8|PROTEIN BDLF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 GGQYGNPL 10
GGQ G P+
Sbjct: 126 GGQRGAPI 133
>sp|BDLF2_EBVG|PROTEIN BDLF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 GGQYGNPL 10
GGQ G P+
Sbjct: 126 GGQRGAPI 133
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 GQYGNPL 10
G YGN L
Sbjct: 520 GSYGNTL 526
5|Sequence|21|30|YGNPLNKYIR
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 YGNPLNKYI 9
YG PLN +I
Sbjct: 131 YGAPLNPHI 139
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 YGNPLNKYI 9
YG PLN +I
Sbjct: 131 YGAPLNPHI 139
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 1 YGNPLNKYIR 10
+G PLN Y R
Sbjct: 625 WGTPLNPYER 634
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 1 YGNPLNKYIR 10
Y P+N+Y+R
Sbjct: 140 YNIPINEYLR 149
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 1 YGNPLNKYIR 10
+G PLN Y R
Sbjct: 700 WGPPLNPYER 709
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 1 YGNPLNKYIR 10
+G PLN Y R
Sbjct: 700 WGPPLNPYER 709
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 1 YGNPLNKYIR 10
+G PLN Y R
Sbjct: 564 WGPPLNPYER 573
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 4 PLNKYIR 10
PL KYIR
Sbjct: 136 PLTKYIR 142
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 GNPLNKYIR 10
GN L +YI+
Sbjct: 2710 GNTLTRYIK 2718
>sp|TEG7_EBVG|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 YGNPLNKY 8
+G P N+Y
Sbjct: 16 FGRPRNRY 23
>sp|TEG7_EBVB9|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 YGNPLNKY 8
+G P N+Y
Sbjct: 16 FGRPRNRY 23
>sp|TEG7_EBVA8|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 YGNPLNKY 8
+G P N+Y
Sbjct: 16 FGRPRNRY 23
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 3 NPLNKY 8
+PLNKY
Sbjct: 464 DPLNKY 469
>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 4 PLNKYIR 10
PL KYI+
Sbjct: 392 PLEKYIQ 398
>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 4 PLNKYIR 10
PL KYI+
Sbjct: 392 PLEKYIQ 398
>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann
Query: 4 PLNKYIR 10
PL KYI+
Sbjct: 392 PLEKYIQ 398
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 GNPLNK 7
G PLNK
Sbjct: 1950 GQPLNK 1955
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 GNPLNK 7
G PLNK
Sbjct: 1950 GQPLNK 1955
>sp|CAPSD_HEVMY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 YGNPLNKY 8
+G+P+N Y
Sbjct: 281 HGSPVNSY 288
>sp|CAPSD_HEVME|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 2
Query: 1 YGNPLNKY 8
+G+P+N Y
Sbjct: 281 HGSPVNSY 288
>sp|CAPSD_HEVPA|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 YGNPLNKY 8
+G+P+N Y
Sbjct: 281 HGSPVNSY 288
>sp|PG125_VACCT|SCAFFOLD protein OPG125|Vaccinia virus (strain Tian Tan)
Query: 1 YGNPLNKYI 9
YGN NK+I
Sbjct: 263 YGNTDNKFI 271
>sp|PG125_VACCC|SCAFFOLD protein OPG125|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 YGNPLNKYI 9
YGN NK+I
Sbjct: 263 YGNTDNKFI 271
>sp|PG125_VACCA|SCAFFOLD protein OPG125|Vaccinia virus (strain Ankara) (VACV)
Query: 1 YGNPLNKYI 9
YGN NK+I
Sbjct: 263 YGNTDNKFI 271
>sp|PG125_MONPV|SCAFFOLD protein OPG125|Monkeypox virus (MPXV)
Query: 1 YGNPLNKYI 9
YGN NK+I
Sbjct: 263 YGNTDNKFI 271
>sp|CAPSD_HEVRH|CAPSID protein|Hepatitis E virus (isolate Rhesus/HT-4)
Query: 1 YGNPLNKY 8
+G+P+N Y
Sbjct: 149 HGSPVNSY 156
>sp|CAPSD_HEVMG|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 1 YGNPLNKY 8
+G+P+N Y
Sbjct: 281 HGSPVNSY 288
>sp|PG125_VAR67|SCAFFOLD protein OPG125|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 YGNPLNKYI 9
YGN NK+I
Sbjct: 263 YGNTDNKFI 271
>sp|D13_VARV|SCAFFOLD protein D13|Variola virus
Query: 1 YGNPLNKYI 9
YGN NK+I
Sbjct: 263 YGNTDNKFI 271
>sp|CAPSD_HEVUS|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 1 YGNPLNKY 8
+G+P+N Y
Sbjct: 281 HGSPVNSY 288
>sp|CAPSD_HEVCT|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 4
Query: 1 YGNPLNKY 8
+G+P+N Y
Sbjct: 279 HGSPVNSY 286
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 GNPLNKY 8
G+P NK+
Sbjct: 4881 GHPFNKF 4887
>sp|CVC2_HHV7J|CAPSID vertex component 2|Human herpesvirus 7 (strain JI)
Query: 3 NPLNKYIR 10
NP +YIR
Sbjct: 477 NPFVEYIR 484
>sp|CAPSD_HEVHY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 YGNPLNKY 8
+G+P+N Y
Sbjct: 281 HGSPVNSY 288
>sp|CVC2_HHV6U|CAPSID vertex component 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 NPLNKYIR 10
NP +YIR
Sbjct: 478 NPFVEYIR 485
>sp|CVC2_HHV6Z|CAPSID vertex component 2|Human herpesvirus 6B (strain Z29)
Query: 3 NPLNKYIR 10
NP +YIR
Sbjct: 478 NPFVEYIR 485
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 4 PLNKYI 9
P NKY+
Sbjct: 1071 PFNKYL 1076
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 3 NPLNKYIR 10
+PL YIR
Sbjct: 433 HPLTPYIR 440
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 2 GNPLNKY 8
GN L+KY
Sbjct: 828 GNALSKY 834
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 YGNPLNKYI 9
Y N L+KY+
Sbjct: 456 YENELSKYL 464
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 YGNPLN 6
YG P+N
Sbjct: 6913 YGKPIN 6918
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 YGNPLN 6
YG P+N
Sbjct: 6863 YGKPIN 6868
>sp|HN_MUMP1|HEMAGGLUTININ-NEURAMINIDASE virus (strain SBL-1) (MuV)
Query: 2 GNPLN 6
GNPLN
Sbjct: 160 GNPLN 164
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 YGNPLNKYI 9
Y N L KY+
Sbjct: 456 YDNELGKYM 464
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 1 YGNPLNK 7
Y NP NK
Sbjct: 177 YRNPRNK 183
6|Sequence|26|35|NKYIRHYEGL
>sp|VL1_HPV66|MAJOR capsid protein L1|Human papillomavirus 66
Query: 1 NKYIRHYE 8
N+Y+RH E
Sbjct: 359 NQYLRHVE 366
>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56
Query: 1 NKYIRHYE 8
N+Y+RH E
Sbjct: 394 NQYLRHVE 401
>sp|TEG1_HHV1F|TEGUMENT protein UL46|Human herpesvirus 1 (strain F)
Query: 2 KYIRHY 7
+YIRHY
Sbjct: 100 EYIRHY 105
>sp|TEG1_HHV11|TEGUMENT protein UL46|Human herpesvirus 1 (strain 17)
Query: 2 KYIRHY 7
+YIRHY
Sbjct: 100 EYIRHY 105
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 KYIRHYEG 9
K IRHY G
Sbjct: 1436 KIIRHYGG 1443
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 KYIRHYEG 9
K IRHY G
Sbjct: 1435 KIIRHYGG 1442
>sp|TEG1_HHV2H|TEGUMENT protein UL46|Human herpesvirus 2 (strain HG52)
Query: 3 YIRHY 7
YIRHY
Sbjct: 101 YIRHY 105
>sp|VL1_HPV63|MAJOR capsid protein L1|Human papillomavirus type 63
Query: 1 NKYIRHYE 8
N+Y RH E
Sbjct: 366 NEYTRHVE 373
>sp|EP84_HCMVM|EARLY phosphoprotein p84|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 YIRHY 7
Y+RHY
Sbjct: 134 YVRHY 138
>sp|EP84_HCMVA|EARLY phosphoprotein p84|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 YIRHY 7
Y+RHY
Sbjct: 134 YVRHY 138
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 NKYIRHY 7
NKY +H+
Sbjct: 4322 NKYFKHW 4328
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 NKYIRHY 7
NKY +H+
Sbjct: 4649 NKYFKHW 4655
>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180
Query: 2 KYIRHYE 8
+YIRH E
Sbjct: 363 EYIRHVE 369
>sp|VL1_HPV54|MAJOR capsid protein L1|Human papillomavirus type 54
Query: 2 KYIRHYE 8
+YIRH E
Sbjct: 355 EYIRHVE 361
>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33
Query: 2 KYIRHYE 8
+YIRH E
Sbjct: 361 EYIRHVE 367
>sp|UL29_HCMVA|UNCHARACTERIZED protein UL29|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 KYIRHYEG 9
+Y+R +EG
Sbjct: 64 RYLRRFEG 71
>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 KYIRHYEG 9
+Y+R +EG
Sbjct: 64 RYLRRFEG 71
>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 KYIRHYEG 9
+Y+R +EG
Sbjct: 63 RYLRRFEG 70
>sp|VL1_HPV30|MAJOR capsid protein L1|Human papillomavirus 30
Query: 2 KYIRHYE 8
+Y+RH E
Sbjct: 368 QYVRHVE 374
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 NKYIRHYEG 9
NKY Y+G
Sbjct: 4855 NKYFEIYDG 4863
>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68
Query: 2 KYIRHYE 8
+Y+RH E
Sbjct: 363 EYVRHVE 369
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 2 KYIRHYE 8
+Y+RH E
Sbjct: 387 EYVRHVE 393
>sp|VL1_HPV53|MAJOR capsid protein L1|Human papillomavirus type 53
Query: 2 KYIRHYE 8
+Y+RH E
Sbjct: 359 QYVRHAE 365
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 NKYIRHY 7
NKY +H+
Sbjct: 737 NKYTQHF 743
>sp|VL1_HPV50|MAJOR capsid protein L1|Human papillomavirus type 50
Query: 1 NKYIRHYE 8
N+Y RH E
Sbjct: 378 NQYSRHTE 385
>sp|RIR2_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 YIRHYEGL 10
Y+R +EG
Sbjct: 6 YVRDHEGF 13
>sp|RIR2_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 YIRHYEGL 10
Y+R +EG
Sbjct: 6 YVRDHEGF 13
>sp|RIR2_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 YIRHYEGL 10
Y+R +EG
Sbjct: 6 YVRDHEGF 13
>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4
Query: 2 KYIRHYE 8
+Y+RH E
Sbjct: 373 QYLRHIE 379
>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a
Query: 2 KYIRHYE 8
+Y+RH E
Sbjct: 372 EYLRHME 378
>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65
Query: 2 KYIRHYE 8
+Y+RH E
Sbjct: 373 QYLRHIE 379
>sp|TERM_ADE40|PRETERMINAL protein|Human adenovirus F serotype 40
Query: 1 NKYIRHYEGL 10
++Y+ HY L
Sbjct: 49 SRYVYHYHRL 58
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 2 KYIRHYE 8
+Y+RH E
Sbjct: 467 EYLRHME 473
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 NKYIRHY 7
+KY+ HY
Sbjct: 1097 SKYLYHY 1103
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 NKYIRHY 7
+KY+ HY
Sbjct: 1097 SKYLYHY 1103
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 NKYIRHY 7
+KY+ HY
Sbjct: 1097 SKYLYHY 1103
>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67
Query: 2 KYIRHYE 8
+Y+RH E
Sbjct: 391 EYLRHVE 397
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 2 KYIRHYE 8
+Y+RH E
Sbjct: 389 EYLRHVE 395
>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17
Query: 2 KYIRHYE 8
+Y+RH E
Sbjct: 373 EYLRHVE 379
>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57
Query: 2 KYIRHYE 8
+Y+RH E
Sbjct: 373 EYLRHME 379
>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38
Query: 2 KYIRHYE 8
+Y+RH E
Sbjct: 372 EYLRHVE 378
>sp|VL1_HPV09|MAJOR capsid protein L1|Human papillomavirus 9
Query: 2 KYIRHYE 8
+Y+RH E
Sbjct: 373 EYLRHVE 379
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 2 KYIRHYE 8
+Y+RH E
Sbjct: 380 EYLRHVE 386
>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37
Query: 2 KYIRHYE 8
+Y+RH E
Sbjct: 373 EYLRHVE 379
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 2 KYIRHYE 8
+Y+RH E
Sbjct: 379 EYLRHVE 385
>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8
Query: 2 KYIRHYE 8
+Y+RH E
Sbjct: 377 EYLRHVE 383
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 2 KYIRHYE 8
+Y+RH E
Sbjct: 380 EYLRHVE 386
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 2 KYIRHYE 8
+Y+RH E
Sbjct: 378 EYLRHVE 384
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 2 KYIRHYE 8
+Y+RH E
Sbjct: 408 EYLRHVE 414
7|Sequence|31|40|HYEGLSYNVD
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 HYEGLSYNVD 10
H+ GL+ NVD
Sbjct: 2590 HFPGLTVNVD 2599
>sp|VE2_HPV40|REGULATORY protein E2|Human papillomavirus 40
Query: 2 YEGLSYNV 9
Y+GLSY V
Sbjct: 154 YKGLSYTV 161
>sp|FUS_MEASZ|FUSION glycoprotein F0|Measles virus (strain Edmonston-Zagreb vaccine)
Query: 3 EGLSYNV 9
EG+SYN+
Sbjct: 300 EGVSYNI 306
>sp|FUS_MEASY|FUSION glycoprotein F0|Measles virus (strain Yamagata-1) (MeV)
Query: 3 EGLSYNV 9
EG+SYN+
Sbjct: 300 EGVSYNI 306
>sp|FUS_MEASP|FUSION glycoprotein F0|Measles virus (strain Philadelphia-26) (MeV)
Query: 3 EGLSYNV 9
EG+SYN+
Sbjct: 300 EGVSYNI 306
>sp|FUS_MEASL|FUSION glycoprotein F0|Measles virus (strain Leningrad-16) (MeV)
Query: 3 EGLSYNV 9
EG+SYN+
Sbjct: 300 EGVSYNI 306
>sp|FUS_MEASI|FUSION glycoprotein F0|Measles virus (strain IP-3-Ca) (MeV)
Query: 3 EGLSYNV 9
EG+SYN+
Sbjct: 303 EGVSYNI 309
>sp|FUS_MEASH|FUSION glycoprotein F0|Measles virus (strain Halle) (MeV)
Query: 3 EGLSYNV 9
EG+SYN+
Sbjct: 300 EGVSYNI 306
>sp|FUS_MEASF|FUSION glycoprotein F0|Measles virus (strain Edmonston B)
Query: 3 EGLSYNV 9
EG+SYN+
Sbjct: 300 EGVSYNI 306
>sp|FUS_MEASE|FUSION glycoprotein F0|Measles virus (strain Edmonston) (MeV)
Query: 3 EGLSYNV 9
EG+SYN+
Sbjct: 300 EGVSYNI 306
>sp|FUS_MEASC|FUSION glycoprotein F0|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 EGLSYNV 9
EG+SYN+
Sbjct: 300 EGVSYNI 306
>sp|FUS_MEASA|FUSION glycoprotein F0|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 EGLSYNV 9
EG+SYN+
Sbjct: 300 EGVSYNI 306
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 YEGLSYNVD 10
Y+G YN+D
Sbjct: 988 YKGEVYNMD 996
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 YEGLSYNVD 10
Y+G YN+D
Sbjct: 988 YKGEVYNMD 996
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 YEGLSYNVD 10
Y+G YN+D
Sbjct: 988 YKGEVYNMD 996
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 HYEGLSYN 8
HY SYN
Sbjct: 584 HYRQTSYN 591
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 YEGLSYNV 9
Y+GL +NV
Sbjct: 6079 YKGLPWNV 6086
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 YEGLSYNV 9
Y+GL +NV
Sbjct: 6056 YKGLPWNV 6063
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 2 YEGLSYNVD 10
Y+G YN+D
Sbjct: 989 YKGDVYNMD 997
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 2 YEGLSYNVD 10
Y+G YN+D
Sbjct: 989 YKGDVYNMD 997
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 YEGLSYNVD 10
Y+G YN+D
Sbjct: 989 YKGDVYNMD 997
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 4 GLSYNVD 10
GLS N+D
Sbjct: 1094 GLSLNID 1100
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 4 GLSYNVD 10
GLS N+D
Sbjct: 1094 GLSLNID 1100
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 HYEGLSYNV 9
YE L Y+V
Sbjct: 411 QYENLKYSV 419
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 HYEGLSYNV 9
YE L Y+V
Sbjct: 411 QYENLKYSV 419
>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 HYEGLSYNV 9
YE L Y+V
Sbjct: 411 QYENLKYSV 419
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 HYEGLSYNV 9
YE L Y+V
Sbjct: 411 QYENLKYSV 419
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 HYEGLSYNV 9
YE L Y+V
Sbjct: 411 QYENLKYSV 419
>sp|V55B_HHV7J|UNCHARACTERIZED protein U55B|Human herpesvirus 7 (strain JI)
Query: 1 HYEGLSYNVD 10
H++G YN +
Sbjct: 292 HFKGTFYNFN 301
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 HYEGLSYNV 9
YE L Y V
Sbjct: 411 QYENLKYTV 419
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 HYEGLSYNV 9
YE L Y V
Sbjct: 411 QYENLKYTV 419
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 3 EGLSYNVD 10
E +SYN+D
Sbjct: 70 ETISYNLD 77
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 3 EGLSYNVD 10
+GL YN D
Sbjct: 978 KGLVYNYD 985
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 3 EGLSYNVD 10
E +SYN+D
Sbjct: 70 ETISYNLD 77
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 EGLSYNVD 10
E +SYN+D
Sbjct: 70 ETISYNLD 77
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 EGLSYNVD 10
E +SYN+D
Sbjct: 70 ETISYNLD 77
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 3 EGLSYNVD 10
E +SYN+D
Sbjct: 70 ETISYNLD 77
>sp|IL1BP_VACCA|INTERLEUKIN-1-BINDING protein|Vaccinia virus (strain Ankara) (VACV)
Query: 2 YEGLSYNV 9
Y G +YNV
Sbjct: 200 YGGKTYNV 207
>sp|TRM1_HHV6Z|TRIPARTITE terminase subunit 1|Human herpesvirus 6B (strain Z29)
Query: 3 EGLSYNV 9
EG+SY+V
Sbjct: 694 EGVSYSV 700
>sp|TRM1_HHV6U|TRIPARTITE terminase subunit 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 EGLSYNV 9
EG+SY+V
Sbjct: 694 EGVSYSV 700
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 HYEGLSYNVD 10
H+ G+ N+D
Sbjct: 170 HFNGVISNLD 179
8|Sequence|36|45|SYNVDSLHQK
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 2 YNVDSLHQK 10
Y D+LH+K
Sbjct: 1179 YARDTLHEK 1187
>sp|VP2_ROTHC|INNER capsid protein VP2|Rotavirus C (isolate RVC/Human/United
Query: 1 SYNVDSL 7
SYN DSL
Sbjct: 101 SYNTDSL 107
>sp|MC007_MCV1|PROTEIN MC007|Molluscum contagiosum virus subtype 1
Query: 4 VDSLHQ 9
VDSLH+
Sbjct: 86 VDSLHR 91
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 1 SYNVDSLH 8
S+N S+H
Sbjct: 926 SFNTSSIH 933
9|Sequence|41|50|SLHQKHQRAK
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 SLHQKHQRA 9
S HQ+H R
Sbjct: 495 SAHQRHTRG 503
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 SLHQKHQR 8
+LHQ +QR
Sbjct: 1309 TLHQANQR 1316
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 LHQKHQ 7
+HQ HQ
Sbjct: 816 IHQAHQ 821
>sp|PG145_MONPV|TRANSCRIPT termination protein OPG145|Monkeypox virus (MPXV)
Query: 3 HQKHQRAK 10
+QKHQ ++
Sbjct: 462 YQKHQESE 469
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 SLHQKHQ 7
S+H KH+
Sbjct: 3287 SIHAKHE 3293
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 SLHQKHQ 7
S+H KH+
Sbjct: 3287 SIHAKHE 3293
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 SLHQKHQ 7
S+H KH+
Sbjct: 3287 SIHAKHE 3293
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 SLHQKHQ 7
S+H KH+
Sbjct: 3287 SIHAKHE 3293
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 SLHQKHQ 7
S+H KH+
Sbjct: 3287 SIHAKHE 3293
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 HQKHQRA 9
HQKH ++
Sbjct: 4610 HQKHLKS 4616
>sp|NS8B_SARS|ORF8B protein|Severe acute respiratory syndrome coronavirus
Query: 2 LHQKHQRA 9
LH+ HQ A
Sbjct: 63 LHEGHQTA 70
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 2 LHQKHQ 7
LH+KH
Sbjct: 757 LHEKHH 762
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 2 LHQKHQR 8
LH +HQ+
Sbjct: 335 LHMEHQK 341
10|Sequence|46|55|HQRAKRAVSH
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 QRAKRAV 8
QRAKRAV
Sbjct: 494 QRAKRAV 500
Query: 2 QRAKRAVSH 10
QRA RAV H
Sbjct: 821 QRAGRAVLH 829
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 QRAKRAVSH 10
QRA RA+ H
Sbjct: 834 QRAGRAILH 842
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 QRAKRAVSH 10
QRA RA+ H
Sbjct: 833 QRAYRAILH 841
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 QRAKRAVSH 10
QRA RAV H
Sbjct: 821 QRAFRAVLH 829
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 HQRAKRAVS 9
H+R KR+V+
Sbjct: 200 HRRQKRSVA 208
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 HQRAKRAVS 9
H+R KR+V+
Sbjct: 100 HRREKRSVA 108
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 HQRAKRAVS 9
H+R KR+V+
Sbjct: 200 HRREKRSVA 208
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 HQRAKRAVS 9
H+R KR+V+
Sbjct: 200 HRREKRSVA 208
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 HQRAKRAVS 9
H+R KR+V+
Sbjct: 200 HRREKRSVA 208
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 HQRAKRAVS 9
H+R KR+V+
Sbjct: 200 HRREKRSVA 208
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 HQRAKRAVS 9
H+R KR+V+
Sbjct: 200 HRREKRSVA 208
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 HQRAKRAVS 9
H+R KR+V+
Sbjct: 200 HRREKRSVA 208
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 QRAKRAVSH 10
QRA RA+ H
Sbjct: 837 QRAWRAILH 845
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 QRAKRAVSH 10
QRA RA+ H
Sbjct: 823 QRAWRAILH 831
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 QRAKRAVSH 10
QRA RA+ H
Sbjct: 834 QRAFRAILH 842
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 QRAKRAVSH 10
QRA RA+ H
Sbjct: 828 QRAFRAILH 836
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 QRAKRAVSH 10
QRA RA+ H
Sbjct: 826 QRAFRAILH 834
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 QRAKRAVSH 10
QRA RA+ H
Sbjct: 845 QRAFRAILH 853
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 QRAKRAVSH 10
QRA RA+ H
Sbjct: 830 QRAFRAILH 838
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 2 QRAKRAVSH 10
+R KR+V+H
Sbjct: 317 RRPKRSVAH 325
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 HQRAKRAVS 9
H+R KR+V+
Sbjct: 200 HRRDKRSVA 208
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 HQRAKRAVS 9
H+R KR+V+
Sbjct: 200 HRRDKRSVA 208
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 HQRAKRAVS 9
H+R KR+V+
Sbjct: 200 HRRDKRSVA 208
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 HQRAKRAVS 9
H+R KR+V+
Sbjct: 200 HRRDKRSVA 208
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 HQRAKRAVS 9
H+R KR+V+
Sbjct: 200 HRRDKRSVA 208
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 HQRAKRAVS 9
H+R KR+V+
Sbjct: 200 HRRDKRSVA 208
>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 HQRAKRAVS 9
H+R KR+V+
Sbjct: 200 HRRDKRSVA 208
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 HQRAKRAVS 9
H+R KR+V+
Sbjct: 200 HRRDKRSVA 208
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 HQRAKRAVS 9
H+R KR+V+
Sbjct: 200 HRRDKRSVA 208
>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 1 HQRAKRA 7
H R KRA
Sbjct: 213 HSRGKRA 219
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 QRAKRAVSH 10
+ AK+AV H
Sbjct: 400 EEAKKAVGH 408
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 KRAVSH 10
KRA+SH
Sbjct: 66 KRAISH 71
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 KRAVSH 10
KRA+SH
Sbjct: 66 KRAISH 71
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 KRAVSH 10
KRA+SH
Sbjct: 66 KRAISH 71
>sp|VL2_HPV43|MINOR capsid protein L2|Human papillomavirus 43
Query: 1 HQRAKRA 7
H+R KRA
Sbjct: 6 HKRRKRA 12
>sp|ORF2_TTVVG|UNCHARACTERIZED ORF2 protein|Torque teno virus (isolate Human/Ghana/GH1/1996)
Query: 1 HQRAKRAVS 9
H R KRA+S
Sbjct: 6 HYRKKRALS 14
>sp|ORF2_TTVA1|UNCHARACTERIZED ORF2 protein|Torque teno virus 1 (isolate
Query: 1 HQRAKRAVS 9
H R KRA+S
Sbjct: 58 HYRKKRALS 66
11|Sequence|51|60|RAVSHEDQFL
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 3 VSHEDQFL 10
VSHED L
Sbjct: 857 VSHEDNVL 864
>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)
Query: 2 AVSHEDQ 8
A++H+DQ
Sbjct: 250 AIAHDDQ 256
>sp|GE_HHV11|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain 17)
Query: 2 AVSHEDQ 8
A++H+DQ
Sbjct: 248 AIAHDDQ 254
>sp|A47_VACCC|PROTEIN A47|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 VSHEDQFL 10
V H D+FL
Sbjct: 56 VDHPDKFL 63
>sp|A47_VACCA|PROTEIN A47|Vaccinia virus (strain Ankara) (VACV)
Query: 3 VSHEDQFL 10
V H D+FL
Sbjct: 51 VDHPDKFL 58
>sp|A47_VARV|PROTEIN A47|Variola virus
Query: 3 VSHEDQFL 10
V H D+FL
Sbjct: 56 VDHPDKFL 63
>sp|A47_VAR67|PROTEIN A47|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 VSHEDQFL 10
V H D+FL
Sbjct: 56 VDHPDKFL 63
>sp|KBTB2_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 3 VSHED 7
VSHED
Sbjct: 460 VSHED 464
>sp|EBNA6_EBVA8|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 RAVSHEDQ 8
+ +SHE+Q
Sbjct: 739 QPISHEEQ 746
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 SHEDQFL 10
SHE QF+
Sbjct: 164 SHEAQFV 170
>sp|EBNA6_EBVB9|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 RAVSHEDQ 8
+ +SHE+Q
Sbjct: 712 QPISHEEQ 719
12|Sequence|56|65|EDQFLRLDFH
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 1 EDQFLRLDFH 10
+ Q LRLD H
Sbjct: 892 KSQLLRLDIH 901
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 3 QFLRLDFH 10
Q LRLD H
Sbjct: 901 QLLRLDIH 908
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 3 QFLRLDFH 10
+ LRLD H
Sbjct: 901 ELLRLDIH 908
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 QFLRLDFH 10
+FL+LD H
Sbjct: 1236 EFLKLDQH 1243
>sp|E1B55_ADE12|E1B 55 kDa protein|Human adenovirus A serotype 12
Query: 1 EDQFLRLDFH 10
+D+F R D H
Sbjct: 123 QDEFQRGDMH 132
>sp|PG030_VACCC|PROTEIN OPG030|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 DQFLRLD 8
DQFL+LD
Sbjct: 111 DQFLKLD 117
>sp|PG030_MONPV|PROTEIN OPG030|Monkeypox virus (MPXV)
Query: 2 DQFLRLD 8
DQFL+LD
Sbjct: 115 DQFLKLD 121
>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P
Query: 2 DQFLRLDF 9
D+FL DF
Sbjct: 593 DEFLHSDF 600
>sp|Y206_ADE07|UNCHARACTERIZED 20.6 kDa early protein|Human adenovirus B serotype 7
Query: 2 DQFLRLDFH 10
D FL FH
Sbjct: 142 DAFLTFGFH 150
13|Sequence|61|70|RLDFHAHGRH
>sp|UL32_HHV7J|PACKAGING protein UL32|Human herpesvirus 7 (strain JI)
Query: 2 LDFHAH 7
LDFH H
Sbjct: 144 LDFHVH 149
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 6 AHGRH 10
AHGRH
Sbjct: 505 AHGRH 509
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 DFHAHGRH 10
DF HGR+
Sbjct: 413 DFDDHGRY 420
>sp|VPK_HHV8P|VIRAL protein kinase|Human herpesvirus 8 type P
Query: 3 DFHAHGRH 10
DF HG H
Sbjct: 429 DFFNHGGH 436
>sp|UL32_HHV6Z|PACKAGING protein UL32 homolog|Human herpesvirus 6B (strain Z29)
Query: 2 LDFHAH 7
DFH H
Sbjct: 143 FDFHVH 148
>sp|UL32_HHV6U|PACKAGING protein UL32|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LDFHAH 7
DFH H
Sbjct: 143 FDFHVH 148
>sp|US23_HCMVA|TEGUMENT protein US23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LDFHAHGRH 10
++FH GRH
Sbjct: 199 VNFHTPGRH 207
>sp|US23_HCMVM|PROTEIN US23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LDFHAHGRH 10
++FH GRH
Sbjct: 199 VNFHTPGRH 207
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 3 DFHAH 7
D+HAH
Sbjct: 612 DYHAH 616
>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)
Query: 3 DFHAHGRH 10
DF HG++
Sbjct: 431 DFDEHGKY 438
>sp|HEMA_I85A6|HEMAGGLUTININ A virus (strain A/Starling/Victoria/5156/1985
Query: 1 RLDFH 5
R+DFH
Sbjct: 238 RIDFH 242
>sp|HEMA_I85A3|HEMAGGLUTININ A virus (strain A/Chicken/Victoria/1/1985
Query: 1 RLDFH 5
R+DFH
Sbjct: 238 RIDFH 242
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 1 RLDFH 5
R+DFH
Sbjct: 238 RIDFH 242
>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963
Query: 1 RLDFH 5
R+DFH
Sbjct: 238 RIDFH 242
>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956
Query: 1 RLDFH 5
R+DFH
Sbjct: 238 RIDFH 242
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 1 RLDFH 5
R+DFH
Sbjct: 238 RIDFH 242
>sp|VL1_HPV50|MAJOR capsid protein L1|Human papillomavirus type 50
Query: 3 DFHAHGRH 10
DF+ + RH
Sbjct: 376 DFNQYSRH 383
>sp|CVC2_HHV8P|CAPSID vertex component 2|Human herpesvirus 8 type P
Query: 3 DFHAHGRH 10
DF A RH
Sbjct: 213 DFFADARH 220
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 2 LDFHAHGRH 10
LDF G H
Sbjct: 1041 LDFFPDGHH 1049
14|Sequence|66|75|AHGRHFNLRM
>sp|VE7_HPV6B|PROTEIN E7|Human papillomavirus type 6b
Query: 2 HGRHFNLR 9
HGRH L+
Sbjct: 2 HGRHVTLK 9
>sp|VE7_HPV6A|PROTEIN E7|Human papillomavirus type 6a
Query: 2 HGRHFNLR 9
HGRH L+
Sbjct: 2 HGRHVTLK 9
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 AHGRH 5
AHGRH
Sbjct: 505 AHGRH 509
>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 AHGRHFN 7
AHGR F+
Sbjct: 221 AHGREFS 227
>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 AHGRHFN 7
AHGR F+
Sbjct: 221 AHGREFS 227
>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 AHGRHFN 7
AHGR F+
Sbjct: 221 AHGREFS 227
>sp|VP24_EBORR|MEMBRANE-ASSOCIATED protein VP24|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 5 HFNLR 9
HFNLR
Sbjct: 133 HFNLR 137
>sp|VP24_EBORE|MEMBRANE-ASSOCIATED protein VP24|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 5 HFNLR 9
HFNLR
Sbjct: 133 HFNLR 137
>sp|NCAP_LBV|NUCLEOPROTEIN bat virus (LBV)
Query: 1 AHGRHFNL 8
A G HFNL
Sbjct: 304 AVGHHFNL 311
>sp|ORF48_HHV8P|TEGUMENT protein ORF48|Human herpesvirus 8 type P
Query: 1 AHGRH 5
+HGRH
Sbjct: 145 SHGRH 149
>sp|PG036_MONPV|PROTEIN OPG036|Monkeypox virus (MPXV)
Query: 4 RHFNLRM 10
RH N+R+
Sbjct: 39 RHINMRI 45
>sp|VP24_EBOSU|MEMBRANE-ASSOCIATED protein VP24|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 5 HFNLR 9
HFN+R
Sbjct: 133 HFNMR 137
>sp|VP24_EBOZ5|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 5 HFNLR 9
HFN+R
Sbjct: 133 HFNMR 137
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 HGRH 5
HGRH
Sbjct: 1564 HGRH 1567
>sp|VP24_EBOG4|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 5 HFNLR 9
HFN+R
Sbjct: 133 HFNMR 137
>sp|VP24_EBOZM|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 5 HFNLR 9
HFN+R
Sbjct: 133 HFNMR 137
15|Sequence|71|80|FNLRMKRDTS
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 FNLRMKRDT 9
FNLR+ RD+
Sbjct: 541 FNLRLMRDS 549
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 FNLRMKRDTS 10
F LRM RDT+
Sbjct: 548 FCLRMARDTN 557
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 FNLRMKRDT 9
F LRM RDT
Sbjct: 549 FCLRMARDT 557
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 FNLRMKRDT 9
F LRM RDT
Sbjct: 551 FCLRMARDT 559
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 FNLRMKRDT 9
F LRM RDT
Sbjct: 551 FCLRMARDT 559
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 FNLRMKRDT 9
F++RM RDT
Sbjct: 550 FSVRMLRDT 558
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 FNLRMKRDT 9
F++RM RDT
Sbjct: 551 FSVRMLRDT 559
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 FNLRMKRDT 9
F++RM RDT
Sbjct: 550 FSVRMLRDT 558
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 FNLRMKRDT 9
F++RM RDT
Sbjct: 550 FSVRMLRDT 558
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 FNLRMKRDT 9
F++RM RDT
Sbjct: 550 FSVRMLRDT 558
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 FNLRMKRDT 9
F++RM RDT
Sbjct: 553 FSVRMLRDT 561
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 FNLRMKRDT 9
F++RM RDT
Sbjct: 550 FSVRMLRDT 558
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 FNLRMKRDTS 10
F LR+ RDT+
Sbjct: 555 FCLRLARDTN 564
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 1 FNLRMKRDT 9
F++RM +DT
Sbjct: 552 FSVRMLKDT 560
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 FNLRMKRDT 9
F++RM +DT
Sbjct: 551 FSVRMLKDT 559
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 FNLRMKRDT 9
F++RM +DT
Sbjct: 551 FSVRMLKDT 559
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 FNLRMKRDT 9
F++RM +DT
Sbjct: 552 FSVRMLKDT 560
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 FNLRMKRDT 9
F++RM +DT
Sbjct: 550 FSVRMLKDT 558
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 FNLRMKRDT 9
F++RM +DT
Sbjct: 552 FSVRMLKDT 560
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 FNLRMKRDT 9
F LR+ +DT
Sbjct: 548 FKLRLMKDT 556
>sp|UL84_HCMVM|PROTEIN UL84|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FNLRMKRDT 9
F LR++R+T
Sbjct: 391 FRLRLRRET 399
>sp|UL84_HCMVT|UL84 protein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 FNLRMKRDT 9
F LR++R+T
Sbjct: 391 FRLRLRRET 399
>sp|UL84_HCMVA|PROTEIN UL84|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FNLRMKRDT 9
F LR++R+T
Sbjct: 390 FRLRLRRET 398
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 FNLRMKRDT 9
F LR+ +DT
Sbjct: 548 FKLRLMKDT 556
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 LRMKRDTS 10
LR+K DTS
Sbjct: 3327 LRLKVDTS 3334
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 LRMKRDTS 10
LR+K DTS
Sbjct: 3327 LRLKVDTS 3334
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 1 FNLRMKRD 8
FN+R K+D
Sbjct: 566 FNVRSKKD 573
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 FNLRMKRD 8
FN+R K+D
Sbjct: 566 FNVRSKKD 573
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 2 NLRMKRDTS 10
NL++KR S
Sbjct: 1018 NLKLKRPAS 1026
>sp|NSS_PUUMS|NON-STRUCTURAL protein NS-S|Puumala virus (strain Sotkamo/V-2969/81)
Query: 2 NLRMKRD 8
NLRM+R+
Sbjct: 11 NLRMQRE 17
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 FNLRMKRDT 9
F+L ++RDT
Sbjct: 999 FHLPVERDT 1007
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 FNLRMKRDT 9
F+L ++RDT
Sbjct: 997 FHLPVERDT 1005
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 FNLRMKRDT 9
F+L ++RDT
Sbjct: 998 FHLPVERDT 1006
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 FNLRMKRD 8
FN+R KR+
Sbjct: 154 FNVRDKRE 161
>sp|VL1_HPV50|MAJOR capsid protein L1|Human papillomavirus type 50
Query: 1 FNLRMKRDTS 10
FN+ +K+D +
Sbjct: 350 FNISVKKDVN 359
16|Sequence|76|85|KRDTSLFSDE
>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40
Query: 3 DTSLFSDE 10
DTSLF+ E
Sbjct: 85 DTSLFNSE 92
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 3 DTSLFSDE 10
DT+LF+D+
Sbjct: 698 DTNLFTDK 705
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 3 DTSLFSDE 10
DT+LF+D+
Sbjct: 698 DTNLFTDK 705
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 3 DTSLFSDE 10
DTSLF+ E
Sbjct: 85 DTSLFNSE 92
>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)
Query: 2 RDTSLFSDE 10
+DT+ SDE
Sbjct: 459 QDTTFLSDE 467
17|Sequence|81|90|LFSDEFKVET
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 LFSDEFKV 8
LFS EFKV
Sbjct: 858 LFSFEFKV 865
>sp|ETF1_VARV|EARLY transcription factor 70 kDa|Variola virus
Query: 1 LFSDEFKVE 9
LF+DEF E
Sbjct: 91 LFNDEFIAE 99
>sp|ETF1_VAR67|EARLY transcription factor 70 kDa|Variola virus (isolate
Query: 1 LFSDEFKVE 9
LF+DEF E
Sbjct: 91 LFNDEFIAE 99
>sp|ETF1_VACCT|EARLY transcription factor 70 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 LFSDEFKVE 9
LF+DEF E
Sbjct: 91 LFNDEFIAE 99
>sp|ETF1_VACCA|EARLY transcription factor 70 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 LFSDEFKVE 9
LF+DEF E
Sbjct: 91 LFNDEFIAE 99
>sp|ETF1_MONPV|EARLY transcription factor 70 kDa|Monkeypox virus (MPXV)
Query: 1 LFSDEFKVE 9
LF+DEF E
Sbjct: 91 LFNDEFIAE 99
>sp|ETF1_VACCC|EARLY transcription factor 70 kDa|Vaccinia virus (strain Copenhagen)
Query: 1 LFSDEFKVE 9
LF+DEF E
Sbjct: 91 LFNDEFIAE 99
>sp|AN_HHV8P|SHUTOFF alkaline exonuclease|Human herpesvirus 8 type P
Query: 1 LFSDEFKVET 10
LFS+++ V+T
Sbjct: 10 LFSEDYLVDT 19
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 4 DEFKVET 10
DEF V+T
Sbjct: 523 DEFDVDT 529
18|Sequence|86|95|FKVETSNKVL
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 KVETSNKVL 10
+VE+ NKV+
Sbjct: 2245 RVESENKVI 2253
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 KVETSNKVL 10
+VE+ NKV+
Sbjct: 2244 RVESENKVV 2252
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 KVETSNKVL 10
+VE+ NKV+
Sbjct: 2243 RVESENKVV 2251
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 KVETSNKVL 10
+VE+ NKV+
Sbjct: 2243 RVESENKVV 2251
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 KVETSNKVL 10
+VE+ NKV+
Sbjct: 2243 RVESENKVV 2251
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 KVETSNKVL 10
+VE+ NKV+
Sbjct: 2243 RVESENKVV 2251
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 KVETSNKVL 10
+VE+ NKV+
Sbjct: 2243 RVESENKVV 2251
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 KVETSNKVL 10
+VE+ NKV+
Sbjct: 2243 RVESENKVV 2251
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 KVETSNKVL 10
+VE+ NKV+
Sbjct: 2243 RVESENKVV 2251
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 KVETSNKVL 10
+VE+ NKV+
Sbjct: 2243 RVESENKVV 2251
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 KVETSNKVL 10
+VE+ NKV+
Sbjct: 2243 RVESENKVV 2251
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 KVETSNKVL 10
+VE+ NKV+
Sbjct: 2248 RVESENKVV 2256
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 KVETSNKVL 10
+VE+ NKV+
Sbjct: 2243 RVESENKVV 2251
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 FKVETSNKVL 10
+K+ NKVL
Sbjct: 949 YKIHQGNKVL 958
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 KVETSNKVL 10
+VE+ NK++
Sbjct: 2241 RVESENKII 2249
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 FKVETSNKVL 10
F++E NK+L
Sbjct: 938 FRIEHINKLL 947
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 FKVETSNKVL 10
F++E NK+L
Sbjct: 938 FRIEHINKLL 947
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 KVETSNKVL 10
+VE+ NK++
Sbjct: 2247 RVESENKIV 2255
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 KVETSNKVL 10
+VE+ NK++
Sbjct: 2243 RVESENKIV 2251
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 KVETSNKVL 10
+VE+ NK++
Sbjct: 2243 RVESENKIV 2251
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 KVETSNKVL 10
+VE NKV+
Sbjct: 2244 RVEAENKVV 2252
19|Sequence|91|100|SNKVLDYDTS
>sp|KBTB2_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 1 SNKVLDYDT 9
SNKV+ YDT
Sbjct: 421 SNKVMRYDT 429
>sp|KBTB2_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 1 SNKVLDYDT 9
SNKV+ YDT
Sbjct: 431 SNKVIRYDT 439
>sp|KBTB2_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 1 SNKVLDYDT 9
SNKV+ YDT
Sbjct: 431 SNKVIRYDT 439
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 SNKVLDYDTS 10
++++LDY+TS
Sbjct: 2241 THQLLDYETS 2250
>sp|KITH_HHV2H|THYMIDINE kinase|Human herpesvirus 2 (strain HG52)
Query: 4 VLDYDTS 10
VLDYD S
Sbjct: 327 VLDYDQS 333
>sp|KITH_HHV23|THYMIDINE kinase|Human herpesvirus 2 (strain 333)
Query: 4 VLDYDTS 10
VLDYD S
Sbjct: 327 VLDYDQS 333
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 NKVLDYD 8
+KVLD+D
Sbjct: 2865 DKVLDFD 2871
>sp|KITH_HHV1S|THYMIDINE kinase|Human herpesvirus 1 (strain SC16)
Query: 4 VLDYDTS 10
+LDYD S
Sbjct: 326 ILDYDQS 332
>sp|KITH_HHV1K|THYMIDINE kinase|Human herpesvirus 1 (strain KOS)
Query: 4 VLDYDTS 10
+LDYD S
Sbjct: 326 ILDYDQS 332
>sp|KITH_HHV1E|THYMIDINE kinase|Human herpesvirus 1 (strain HFEM)
Query: 4 VLDYDTS 10
+LDYD S
Sbjct: 326 ILDYDQS 332
>sp|KITH_HHV1C|THYMIDINE kinase|Human herpesvirus 1 (strain CL101)
Query: 4 VLDYDTS 10
+LDYD S
Sbjct: 326 ILDYDQS 332
>sp|KITH_HHV11|THYMIDINE kinase|Human herpesvirus 1 (strain 17)
Query: 4 VLDYDTS 10
+LDYD S
Sbjct: 326 ILDYDQS 332
>sp|KITH_HHV1|THYMIDINE kinase|Human herpesvirus 1 (HHV-1) (Human
Query: 4 VLDYDTS 10
+LDYD S
Sbjct: 326 ILDYDQS 332
>sp|VPAP_HHV6G|DNA polymerase processivity factor|Human herpesvirus 6A (strain GS)
Query: 1 SNKVLDYD 8
SNKV+ YD
Sbjct: 237 SNKVIFYD 244
>sp|TEG7_HHV8P|TEGUMENT protein ORF55|Human herpesvirus 8 type P
Query: 1 SNKVLDY 7
SNK+ DY
Sbjct: 74 SNKITDY 80
>sp|VPAP_HHV6U|DNA polymerase processivity factor|Human herpesvirus 6A (strain
Query: 1 SNKVLDYD 8
SNKV+ YD
Sbjct: 242 SNKVIFYD 249
>sp|VPAP_HHV6Z|DNA polymerase processivity factor|Human herpesvirus 6B (strain Z29)
Query: 1 SNKVLDYD 8
SNKV+ YD
Sbjct: 217 SNKVIFYD 224
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SNKVLDYD 8
SN+ +DY+
Sbjct: 131 SNRTIDYN 138
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 NKVLDY 7
N++LDY
Sbjct: 601 NRILDY 606
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 NKVLDY 7
N++LDY
Sbjct: 601 NRILDY 606
>sp|NSP3_ROT41|NON-STRUCTURAL protein 3|Rotavirus A (isolate
Query: 2 NKVLDYDTS 10
N +LDYD +
Sbjct: 287 NVILDYDRT 295
>sp|NSP3_ROTH7|NON-STRUCTURAL protein 3|Rotavirus A (isolate RVA/Human/United
Query: 2 NKVLDYD 8
N +LDYD
Sbjct: 284 NIILDYD 290
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 KVLDYD 8
K+LDYD
Sbjct: 5926 KLLDYD 5931
>sp|UL33_HCMVA|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain
Query: 1 SNKVLDYDT 9
+N+VL Y T
Sbjct: 59 TNRVLGYST 67
>sp|UL33_HCMVM|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain
Query: 1 SNKVLDYDT 9
+N+VL Y T
Sbjct: 60 TNRVLGYST 68
20|Sequence|96|105|DYDTSHIYTG
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 1 DYDTSHIY 8
+YD HIY
Sbjct: 226 EYDRVHIY 233
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 DYDTSHIYTG 10
DY+ +HI G
Sbjct: 1751 DYEITHIRVG 1760
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 1 DYDTSHIY 8
DYD +IY
Sbjct: 226 DYDRVYIY 233
>sp|PG042_MONPV|VIRION nicking-joining enzyme|Monkeypox virus (MPXV)
Query: 3 DTSHIYTG 10
D +HIY G
Sbjct: 122 DNTHIYLG 129
>sp|PG042_VACCC|VIRION nicking-joining enzyme|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 DTSHIYTG 10
D +HIY G
Sbjct: 122 DNTHIYLG 129
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 DYDTSHI 7
D+D SHI
Sbjct: 1560 DWDDSHI 1566
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 YDTSHIY 8
YD +H+Y
Sbjct: 1806 YDGAHLY 1812
>sp|SPIKE_ADE31|FIBER protein|Human adenovirus A serotype 31
Query: 2 YDTSHI 7
YDT+H+
Sbjct: 27 YDTAHV 32
>sp|CEP2_EBVG|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 DYDTSHIYT 9
D T+H++T
Sbjct: 131 DLTTAHVFT 139
>sp|CEP2_EBVB9|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 DYDTSHIYT 9
D T+H++T
Sbjct: 131 DLTTAHVFT 139
>sp|CEP2_EBVA8|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 DYDTSHIYT 9
D T+H++T
Sbjct: 131 DLTTAHVFT 139
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 DYDTSHI 7
+YD++HI
Sbjct: 9 EYDSAHI 15
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DYDTSHI 7
+YD++HI
Sbjct: 9 EYDSAHI 15
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DYDTSHI 7
+YD++HI
Sbjct: 9 EYDSAHI 15
>sp|GLYC_LASSJ|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain Mouse/Sierra
Query: 2 YDTSHIYTG 10
Y+ SH Y G
Sbjct: 166 YNLSHSYAG 174
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 DYDTSHIY 8
DY+ S+IY
Sbjct: 6519 DYERSNIY 6526
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 DYDTSHIYT 9
D DT+ +YT
Sbjct: 1406 DRDTTRLYT 1414
>sp|NSP3_ROTH3|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 2 YDTSHIYT 9
YD + +YT
Sbjct: 37 YDYNEVYT 44
>sp|UL49_HHV6Z|PROTEIN U33|Human herpesvirus 6B (strain Z29)
Query: 2 YDTSHIY 8
Y T H+Y
Sbjct: 412 YSTVHLY 418
>sp|UL49_HHV6U|PROTEIN U33|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 YDTSHIY 8
Y T H+Y
Sbjct: 412 YSTVHLY 418
21|Sequence|101|110|HIYTGHIYGE
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 IYTGHIYG 9
IYTGHI G
Sbjct: 308 IYTGHITG 315
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 IYTGHIYG 9
IYTGHI G
Sbjct: 308 IYTGHITG 315
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 IYTGHIYG 9
IYTGH+ G
Sbjct: 308 IYTGHVTG 315
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 IYTGHIYG 9
IYTGH+ G
Sbjct: 308 IYTGHVTG 315
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 IYTGHIYG 9
IYTGH+ G
Sbjct: 308 IYTGHVTG 315
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 IYTGHIYG 9
+YTGH+ G
Sbjct: 308 VYTGHVTG 315
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 IYTGHIYG 9
IY+GHI G
Sbjct: 308 IYSGHITG 315
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 IYTGHIYG 9
IY+GHI G
Sbjct: 308 IYSGHITG 315
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HIYTGHIY 8
H YT HIY
Sbjct: 622 HNYTQHIY 629
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 IYTGHIYG 9
IY GHI G
Sbjct: 308 IYAGHITG 315
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 IYTGHIYG 9
IY GHI G
Sbjct: 308 IYVGHITG 315
>sp|DR7_HHV6U|TRANSACTIVATOR protein DR7|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 HIYTGHIYG 9
H+Y GH G
Sbjct: 233 HLYAGHPLG 241
>sp|DR6_HHV6U|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 HIYTGHIYG 9
H+Y GH G
Sbjct: 265 HLYAGHPLG 273
>sp|DR6_HHV6Z|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6B (strain Z29)
Query: 1 HIYTGHIYG 9
H+Y GH G
Sbjct: 265 HLYAGHPLG 273
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 3 YTGHIY 8
Y GHIY
Sbjct: 201 YEGHIY 206
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 3 YTGHIY 8
Y GHIY
Sbjct: 200 YEGHIY 205
>sp|UL23_HCMVM|TEGUMENT protein UL23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HIYTGHIYGE 10
+++T HIY +
Sbjct: 102 YLWTDHIYSD 111
>sp|UL23_HCMVA|TEGUMENT protein UL23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HIYTGHIYGE 10
+++T HIY +
Sbjct: 102 YLWTDHIYSD 111
>sp|TRX1_HHV6Z|TRIPLEX capsid protein 1|Human herpesvirus 6B (strain Z29)
Query: 1 HIYTGHIYGE 10
++Y H+Y E
Sbjct: 194 YVYVVHVYKE 203
>sp|TRX1_HHV6U|TRIPLEX capsid protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 HIYTGHIYGE 10
++Y H+Y E
Sbjct: 194 YVYVVHVYKE 203
>sp|TRX1_HHV6H|TRIPLEX capsid protein 1|Human herpesvirus 6B (HHV-6 variant
Query: 1 HIYTGHIYGE 10
++Y H+Y E
Sbjct: 194 YVYVVHVYKE 203
>sp|E320_ADE1P|EARLY E3 20.3 kDa glycoprotein|Human adenovirus B serotype 11
Query: 2 IYTGHIYG 9
+Y+G+ YG
Sbjct: 79 VYSGYYYG 86
>sp|E320_ADE1A|EARLY E3 20.3 kDa glycoprotein|Human adenovirus B serotype 11
Query: 2 IYTGHIYG 9
+Y+G+ YG
Sbjct: 79 VYSGYYYG 86
>sp|E320_ADE35|EARLY E3 20.3 kDa glycoprotein|Human adenovirus B serotype 35
Query: 2 IYTGHIYG 9
+Y+G+ YG
Sbjct: 79 VYSGYYYG 86
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 4 TGHIYGE 10
T H++GE
Sbjct: 1247 TAHVHGE 1253
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 4 TGHIYGE 10
T H++GE
Sbjct: 1247 TAHVHGE 1253
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 4 TGHIYGE 10
T H++GE
Sbjct: 1247 TAHVHGE 1253
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 3 YTGHIYG 9
+TG +YG
Sbjct: 3116 FTGSVYG 3122
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 YTGHIYG 9
+TG +YG
Sbjct: 3116 FTGSVYG 3122
>sp|TYSY_VZVO|THYMIDYLATE synthase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 HIYTGHI 7
HIY HI
Sbjct: 244 HIYLNHI 250
>sp|TYSY_VZVD|THYMIDYLATE synthase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 HIYTGHI 7
HIY HI
Sbjct: 244 HIYLNHI 250
>sp|E320_ADE03|EARLY E3 20.1 kDa glycoprotein|Human adenovirus B serotype 3
Query: 2 IYTGHIYG 9
IY G+ YG
Sbjct: 79 IYNGYYYG 86
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 HIYTGHI 7
H++ GH+
Sbjct: 556 HMFAGHL 562
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 HIYTGHI 7
H++ GH+
Sbjct: 556 HMFAGHL 562
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 HIYTGHI 7
H++ GH+
Sbjct: 556 HMFAGHL 562
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 HIYTGHI 7
H++ GH+
Sbjct: 556 HMFAGHL 562
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 HIYTGHI 7
H++ GH+
Sbjct: 556 HMFAGHL 562
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 IYTGHIYGE 10
IY HIY +
Sbjct: 1697 IYNVHIYNK 1705
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 IYTGHIYGE 10
IY HIY +
Sbjct: 1611 IYNVHIYNK 1619
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 YTGHIYG 9
+TG+ YG
Sbjct: 3481 FTGNFYG 3487
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 YTGHIYG 9
+TG+ YG
Sbjct: 3511 FTGNFYG 3517
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 YTGHIYG 9
+TG+ YG
Sbjct: 3481 FTGNFYG 3487
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 YTGHIYG 9
+TG+ YG
Sbjct: 3511 FTGNFYG 3517
22|Sequence|106|115|HIYGEEGSFS
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 1 HIYGEEGSF 9
H Y E G+F
Sbjct: 201 HFYQERGTF 209
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 HIYGEEGSF 9
+IY EEG +
Sbjct: 971 YIYDEEGGY 979
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 HIYGEEGSF 9
+IY EEG +
Sbjct: 971 YIYDEEGGY 979
>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2
Query: 2 IYGEEGSF 9
++GE GSF
Sbjct: 732 VWGEGGSF 739
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 1 HIYGEEGSF 9
H Y E G+F
Sbjct: 215 HFYQEGGTF 223
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HIYGEE 6
H+YGE+
Sbjct: 335 HLYGED 340
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HIYGEE 6
H+YGE+
Sbjct: 335 HLYGED 340
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 1 HIYGEEGSF 9
H Y E G F
Sbjct: 201 HFYQERGVF 209
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 1 HIYGEEGSF 9
H Y E G F
Sbjct: 201 HFYQERGVF 209
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 HIYGEEG 7
+IY EEG
Sbjct: 970 YIYDEEG 976
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 HIYGEEG 7
+IY EEG
Sbjct: 970 YIYDEEG 976
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 2 IYGEEGSFS 10
IY E+ +FS
Sbjct: 27 IYNEKSTFS 35
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 EEGSFS 10
E+GSFS
Sbjct: 1424 EDGSFS 1429
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 EEGSFS 10
E+GSFS
Sbjct: 1424 EDGSFS 1429
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 EEGSFS 10
E+GSFS
Sbjct: 1424 EDGSFS 1429
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 EEGSFS 10
E+GSFS
Sbjct: 1424 EDGSFS 1429
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 EEGSFS 10
E+GSFS
Sbjct: 1424 EDGSFS 1429
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 HIYGEEGS 8
+IYG EG+
Sbjct: 571 NIYGGEGN 578
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 HIYGEEGSFS 10
HI+ G FS
Sbjct: 379 HIFNCRGEFS 388
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 HIYGEEGS 8
H+Y EGS
Sbjct: 1809 HLYLAEGS 1816
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 HIYGEEGS 8
H+Y EGS
Sbjct: 1810 HLYLAEGS 1817
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 HIYGEEGS 8
H+Y EGS
Sbjct: 1810 HLYLAEGS 1817
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 HIYGEEGS 8
H+Y EGS
Sbjct: 1810 HLYLAEGS 1817
>sp|RDRP_I00A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 HIYGEEGSFS 10
H Y E+G ++
Sbjct: 47 HQYSEQGKWT 56
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 HIYGEEGS 8
H+Y EGS
Sbjct: 1804 HLYIAEGS 1811
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 HIYGEEGS 8
H+Y EGS
Sbjct: 1804 HLYIAEGS 1811
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 HIYGEEGSFS 10
H+ GE +FS
Sbjct: 325 HVKGESITFS 334
23|Sequence|111|120|EGSFSHGSVI
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 2 GSFSHG 7
G+FSHG
Sbjct: 285 GAFSHG 290
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 2 GSFSHG 7
G+FSHG
Sbjct: 285 GAFSHG 290
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 2 GSFSHG 7
G+FSHG
Sbjct: 284 GAFSHG 289
>sp|NPH2_MCV1|RNA helicase NPH-II|Molluscum contagiosum virus subtype 1
Query: 4 FSHGSVI 10
F+HG+VI
Sbjct: 300 FAHGTVI 306
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 GSFSHGSV 9
G FSHG +
Sbjct: 6667 GDFSHGQL 6674
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 2 GSFSHGS 8
G+F+HG+
Sbjct: 283 GAFTHGT 289
>sp|UL24_VZVO|PROTEIN UL24 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 GSFSHG 7
G FSHG
Sbjct: 253 GMFSHG 258
>sp|UL24_VZVD|PROTEIN UL24 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 GSFSHG 7
G FSHG
Sbjct: 253 GMFSHG 258
>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 FSHGSVI 10
F HGSV+
Sbjct: 400 FIHGSVV 406
>sp|US21_HCMVM|MEMBRANE protein US21|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 FSHGSVI 10
FSH SVI
Sbjct: 100 FSHRSVI 106
>sp|US21_HCMVA|UNCHARACTERIZED protein HWLF2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 FSHGSVI 10
FSH SVI
Sbjct: 100 FSHRSVI 106
>sp|ORF2_TTVA1|UNCHARACTERIZED ORF2 protein|Torque teno virus 1 (isolate
Query: 1 EGSFSHGS 8
EG F+H S
Sbjct: 26 EGEFTHRS 33
>sp|MIR2_HHV8P|E3 ubiquitin-protein ligase MIR2|Human herpesvirus 8 type P
Query: 2 GSFSHGSVI 10
G+FS G+V+
Sbjct: 117 GTFSPGAVL 125
>sp|VE2_HPV08|REGULATORY protein E2|Human papillomavirus type 8
Query: 1 EGSFSHGSVI 10
+GSF H V+
Sbjct: 162 QGSFRHYYVV 171
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 3 SFSHGSVI 10
SF+HG +
Sbjct: 513 SFTHGGYV 520
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 3 SFSHGSVI 10
++ HG+VI
Sbjct: 503 AYDHGNVI 510
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 3 SFSHGSVI 10
++ HG+VI
Sbjct: 503 AYDHGNVI 510
24|Sequence|116|125|HGSVIDGRFE
>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 VIDGRFE 10
VIDGRF+
Sbjct: 455 VIDGRFD 461
>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 4 VIDGRFE 10
VIDGRF+
Sbjct: 455 VIDGRFD 461
>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)
Query: 4 VIDGRFE 10
VIDGRF+
Sbjct: 455 VIDGRFD 461
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 GSVIDGR 8
GS++DGR
Sbjct: 35 GSLLDGR 41
>sp|PAP1_VARV|POLY(A) polymerase catalytic subunit|Variola virus
Query: 1 HGSVIDGR 8
HG V DG+
Sbjct: 320 HGIVFDGK 327
>sp|PAP1_VAR67|POLY(A) polymerase catalytic subunit|Variola virus (isolate
Query: 1 HGSVIDGR 8
HG V DG+
Sbjct: 320 HGIVFDGK 327
>sp|PAP1_VACCC|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Copenhagen)
Query: 1 HGSVIDGR 8
HG V DG+
Sbjct: 320 HGIVFDGK 327
>sp|PAP1_VACCA|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 1 HGSVIDGR 8
HG V DG+
Sbjct: 320 HGIVFDGK 327
>sp|PAP1_HSPV|POLY(A) polymerase catalytic subunit|Horsepox virus (HSPV)
Query: 1 HGSVIDGR 8
HG V DG+
Sbjct: 320 HGIVFDGK 327
>sp|PAP1_CWPXG|POLY(A) polymerase catalytic subunit|Cowpox virus (strain GRI-90 /
Query: 1 HGSVIDGR 8
HG V DG+
Sbjct: 320 HGIVFDGK 327
>sp|RIR1_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus
Query: 4 VIDGRFE 10
VIDG+F+
Sbjct: 455 VIDGQFD 461
>sp|RIR1_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus (isolate
Query: 4 VIDGRFE 10
VIDG+F+
Sbjct: 455 VIDGQFD 461
>sp|PG138_VARV|25 kDa core protein OPG138|Variola virus
Query: 1 HGSVIDGRFE 10
+G+V DG+ E
Sbjct: 121 YGTVRDGQLE 130
>sp|PG138_VAR67|25 kDa core protein OPG138|Variola virus (isolate
Query: 1 HGSVIDGRFE 10
+G+V DG+ E
Sbjct: 121 YGTVRDGQLE 130
>sp|PG138_VACCC|25 kDa core protein OPG138|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 HGSVIDGRFE 10
+G+V DG+ E
Sbjct: 124 YGTVRDGQLE 133
>sp|PG138_VACCA|25 kDa core protein OPG138|Vaccinia virus (strain Ankara) (VACV)
Query: 1 HGSVIDGRFE 10
+G+V DG+ E
Sbjct: 119 YGTVRDGQLE 128
>sp|PG138_MONPV|25 kDa core protein OPG138|Monkeypox virus (MPXV)
Query: 1 HGSVIDGRFE 10
+G+V DG+ E
Sbjct: 122 YGTVRDGQLE 131
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 1 HGSVIDG 7
HG+ +DG
Sbjct: 181 HGAFLDG 187
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 1 HGSVIDG 7
HG+ +DG
Sbjct: 181 HGAFLDG 187
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 1 HGSVIDG 7
HG+ +DG
Sbjct: 181 HGAFLDG 187
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 1 HGSVIDG 7
HG+ +DG
Sbjct: 181 HGAFLDG 187
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 1 HGSVIDG 7
HG+ +DG
Sbjct: 181 HGAFLDG 187
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 1 HGSVIDG 7
HG+ +DG
Sbjct: 181 HGAFLDG 187
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 GSVIDGRF 9
GSVI G F
Sbjct: 693 GSVIGGAF 700
>sp|PAP1_VACCT|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Tian Tan)
Query: 1 HGSVIDG 7
HG V DG
Sbjct: 320 HGIVFDG 326
>sp|PAP1_MONPV|POLY(A) polymerase catalytic subunit|Monkeypox virus (MPXV)
Query: 1 HGSVIDG 7
HG V DG
Sbjct: 320 HGIVFDG 326
>sp|PAP1_CWPXB|POLY(A) polymerase catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 1 HGSVIDG 7
HG V DG
Sbjct: 320 HGIVFDG 326
>sp|US18_HCMVT|TRANSMEMBRANE protein HWLF5|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 HGSVIDG 7
HG IDG
Sbjct: 261 HGGRIDG 267
>sp|US18_HCMVM|TRANSMEMBRANE protein US18|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HGSVIDG 7
HG IDG
Sbjct: 261 HGGRIDG 267
>sp|US18_HCMVA|TRANSMEMBRANE protein US18|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HGSVIDG 7
HG IDG
Sbjct: 261 HGGRIDG 267
>sp|MATRX_MEASB|MATRIX protein|Measles virus (strain Biken) (MeV)
Query: 1 HGSVID 6
HG +ID
Sbjct: 202 HGKIID 207
25|Sequence|121|130|DGRFEGFIQT
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 4 FEGFIQ 9
FEGF+Q
Sbjct: 51 FEGFLQ 56
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 DGRFEG 6
D RFEG
Sbjct: 347 DARFEG 352
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 DGRFEG 6
D RFEG
Sbjct: 347 DARFEG 352
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 4 FEGFIQT 10
FEGFI +
Sbjct: 272 FEGFIMS 278
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 DGRFEGFIQT 10
DG EG I T
Sbjct: 528 DGSNEGLITT 537
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 DGRFEGFIQT 10
DG EG I T
Sbjct: 528 DGSNEGLITT 537
>sp|U8_HHV6U|PROTEIN U8|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 DGRFEGFIQ 9
D ++GF++
Sbjct: 75 DDHYQGFVE 83
26|Sequence|126|135|GFIQTRGGTF
>sp|PAP_VZVD|DNA polymerase processivity factor|Varicella-zoster virus (strain
Query: 2 FIQTRGGTF 10
+IQT GG F
Sbjct: 207 YIQTAGGGF 215
>sp|PAP_VZVO|DNA polymerase processivity factor|Varicella-zoster virus (strain Oka
Query: 2 FIQTRGGTF 10
+IQT GG F
Sbjct: 207 YIQTAGGGF 215
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 2 FIQTRGGT 9
FI+ RGG+
Sbjct: 1680 FIEQRGGS 1687
>sp|VL2_HPV23|MINOR capsid protein L2|Human papillomavirus 23
Query: 3 IQTRGGT 9
IQTR GT
Sbjct: 346 IQTRSGT 352
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 3 IQTRGGTF 10
+QT+ GTF
Sbjct: 1579 VQTKPGTF 1586
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 IQTRGGT 9
IQT GGT
Sbjct: 548 IQTSGGT 554
>sp|VL2_HPV38|MINOR capsid protein L2|Human papillomavirus 38
Query: 1 GFIQTRGGT 9
G I+TR GT
Sbjct: 350 GTIRTRSGT 358
>sp|SCAF_EBVG|CAPSID scaffolding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 GFIQTRGGTF 10
G Q+R G F
Sbjct: 59 GLYQSRAGLF 68
>sp|SCAF_EBVB9|CAPSID scaffolding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 GFIQTRGGTF 10
G Q+R G F
Sbjct: 59 GLYQSRAGLF 68
>sp|SCAF_EBVA8|CAPSID scaffolding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 GFIQTRGGTF 10
G Q+R G F
Sbjct: 59 GLYQSRAGLF 68
>sp|CAPSD_LORDV|CAPSID protein VP1|Lordsdale virus (strain GII/Human/United
Query: 2 FIQTRGGTF 10
F+Q GG F
Sbjct: 56 FVQAPGGEF 64
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 IQTRGGT 9
IQT GGT
Sbjct: 548 IQTLGGT 554
>sp|VU3_HHV6U|PROTEIN U3|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 GFIQTRGG 8
G+++ RGG
Sbjct: 118 GYVKKRGG 125
>sp|NEF_HV2RO|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 2 FIQTRGG 8
I+TRGG
Sbjct: 122 LIKTRGG 128
>sp|VPR_HV2CA|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 4 QTRGG 8
QTRGG
Sbjct: 88 QTRGG 92
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 FIQTRGGTF 10
F RGGT+
Sbjct: 1576 FYFNRGGTY 1584
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 FIQTRGGTF 10
F RGGT+
Sbjct: 1576 FYFNRGGTY 1584
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 FIQTRGGTF 10
F RGGT+
Sbjct: 1576 FYFNRGGTY 1584
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 FIQTRGGTF 10
F RGGT+
Sbjct: 1576 FYFNRGGTY 1584
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 FIQTRGGTF 10
F RGGT+
Sbjct: 1576 FYFNRGGTY 1584
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 FIQTRGGTF 10
F RGGT+
Sbjct: 1410 FYFNRGGTY 1418
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 FIQTRGGTF 10
F RGGT+
Sbjct: 1576 FYFNRGGTY 1584
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 FIQTRGGTF 10
F RGGT+
Sbjct: 1576 FYFNRGGTY 1584
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 FIQTRGGTF 10
F RGGT+
Sbjct: 1574 FYFNRGGTY 1582
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 FIQTRGGTF 10
F RGGT+
Sbjct: 1576 FYFNRGGTY 1584
>sp|VL2_HPV21|MINOR capsid protein L2|Human papillomavirus 21
Query: 1 GFIQTRGGT 9
G I+TR GT
Sbjct: 349 GTIRTRSGT 357
>sp|VPR_HV2RO|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 4 QTRGG 8
QTRGG
Sbjct: 88 QTRGG 92
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 IQTRGGTF 10
I+T GG F
Sbjct: 643 IETNGGGF 650
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 IQTRGGTF 10
+QT GTF
Sbjct: 1584 VQTTPGTF 1591
27|Sequence|131|140|RGGTFYVEPA
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 GGTFYVEPA 10
GG +YV+P
Sbjct: 5035 GGCYYVKPG 5043
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 GGTFYVEPA 10
GG +YV+P
Sbjct: 5073 GGCYYVKPG 5081
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 GGTFYVEPA 10
GG +YV+P
Sbjct: 5093 GGCYYVKPG 5101
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 GGTFYVEPA 10
GG +YV+P
Sbjct: 5123 GGCYYVKPG 5131
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 GGTFYVEPA 10
GG+ YV+P
Sbjct: 5062 GGSLYVKPG 5070
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 GGTFYVEPA 10
GG+ YV+P
Sbjct: 5039 GGSLYVKPG 5047
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 RGGTFY 6
RGGT+Y
Sbjct: 1580 RGGTYY 1585
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 RGGTFY 6
RGGT+Y
Sbjct: 1580 RGGTYY 1585
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 RGGTFY 6
RGGT+Y
Sbjct: 1580 RGGTYY 1585
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 RGGTFY 6
RGGT+Y
Sbjct: 1580 RGGTYY 1585
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 RGGTFY 6
RGGT+Y
Sbjct: 1580 RGGTYY 1585
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 RGGTFY 6
RGGT+Y
Sbjct: 1414 RGGTYY 1419
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 RGGTFY 6
RGGT+Y
Sbjct: 1580 RGGTYY 1585
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 RGGTFY 6
RGGT+Y
Sbjct: 1580 RGGTYY 1585
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 RGGTFY 6
RGGT+Y
Sbjct: 1578 RGGTYY 1583
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 RGGTFY 6
RGGT+Y
Sbjct: 1580 RGGTYY 1585
>sp|VL2_HPV55|MINOR capsid protein L2|Human papillomavirus type 55
Query: 2 GGTFYVEPA 10
G TFY+ PA
Sbjct: 432 GATFYLYPA 440
>sp|VL2_HPV31|MINOR capsid protein L2|Human papillomavirus 31
Query: 2 GGTFYVEPA 10
GG FY+ P+
Sbjct: 436 GGDFYLHPS 444
>sp|VL2_HPV54|MINOR capsid protein L2|Human papillomavirus type 54
Query: 2 GGTFYVEPA 10
GG FY+ P+
Sbjct: 440 GGDFYLHPS 448
>sp|CEP2_EBVG|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 RGGTFYVEPA 10
RGG +Y E A
Sbjct: 163 RGGAWYAEGA 172
>sp|CEP2_EBVB9|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 RGGTFYVEPA 10
RGG +Y E A
Sbjct: 163 RGGAWYAEGA 172
>sp|CEP2_EBVA8|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 RGGTFYVEPA 10
RGG +Y E A
Sbjct: 163 RGGAWYAEGA 172
>sp|VL2_HPV35|MINOR capsid protein L2|Human papillomavirus 35
Query: 2 GGTFYVEPA 10
GG FY+ P+
Sbjct: 439 GGDFYLHPS 447
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 2 GGTFY 6
GGTFY
Sbjct: 220 GGTFY 224
>sp|NCAP_INBAD|NUCLEOPROTEIN B virus (strain B/Ann
Query: 2 GGTFY 6
GGTFY
Sbjct: 151 GGTFY 155
>sp|NCAP_INBAC|NUCLEOPROTEIN B virus (strain B/Ann
Query: 2 GGTFY 6
GGTFY
Sbjct: 151 GGTFY 155
>sp|NCAP_INBSI|NUCLEOPROTEIN B virus (strain B/Singapore/222/1979)
Query: 2 GGTFY 6
GGTFY
Sbjct: 151 GGTFY 155
>sp|NCAP_INBP9|NUCLEOPROTEIN B virus (strain B/Panama/45/1990)
Query: 2 GGTFY 6
GGTFY
Sbjct: 151 GGTFY 155
>sp|NCAP_INBAA|NUCLEOPROTEIN B virus (strain B/Ann
Query: 2 GGTFY 6
GGTFY
Sbjct: 151 GGTFY 155
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 RGGTFYVE 8
RGG FY +
Sbjct: 221 RGGKFYSQ 228
>sp|VME1_CVHOC|MEMBRANE protein|Human coronavirus OC43 (HCoV-OC43)
Query: 3 GTFYVEP 9
GT YV P
Sbjct: 131 GTMYVRP 137
>sp|NCAP_INBLE|NUCLEOPROTEIN B virus (strain B/Lee/1940)
Query: 2 GGTFY 6
GGTFY
Sbjct: 151 GGTFY 155
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 RGGTFYVEP 9
R G + VEP
Sbjct: 589 RAGRYKVEP 597
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 RGGTFYVEP 9
R G + VEP
Sbjct: 589 RAGRYKVEP 597
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 RGGTFYVEP 9
R G + VEP
Sbjct: 589 RAGRYKVEP 597
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 RGGTFYVEP 9
R G + VEP
Sbjct: 589 RAGRYKVEP 597
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 RGGTFYVEP 9
R G + VEP
Sbjct: 596 RAGRYAVEP 604
>sp|VL2_HPV07|MINOR capsid protein L2|Human papillomavirus 7
Query: 1 RGGTFYVEPA 10
RG +Y+ PA
Sbjct: 434 RGTDYYLNPA 443
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 RGGTFYVEP 9
R G + VEP
Sbjct: 596 RSGRYAVEP 604
>sp|VL2_HPV15|MINOR capsid protein L2|Human papillomavirus 15
Query: 2 GGTFYVEPA 10
GG +Y+ P+
Sbjct: 514 GGDYYLHPS 522
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 RGGTFYVE 8
+GG FY +
Sbjct: 221 KGGKFYAQ 228
>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)
Query: 2 GGTFYVEPA 10
GG +++EP
Sbjct: 48 GGEWFLEPG 56
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 2 GGTFYVEP 9
G FYV P
Sbjct: 147 SGPFYVHP 154
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 2 GGTFYVEP 9
G FYV P
Sbjct: 147 SGPFYVHP 154
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 2 GGTFYVEP 9
G FYV P
Sbjct: 147 SGPFYVHP 154
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 2 GGTFYVEP 9
G FYV P
Sbjct: 147 SGPFYVHP 154
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 2 GGTFYVEP 9
G FYV P
Sbjct: 147 SGPFYVHP 154
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 GGTFYVEP 9
G FYV P
Sbjct: 147 SGPFYVHP 154
>sp|VL2_HPV08|MINOR capsid protein L2|Human papillomavirus type 8
Query: 1 RGGTFYVE 8
R G++YV+
Sbjct: 456 RSGSYYVQ 463
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 2 GGTFYVEP 9
G FYV P
Sbjct: 147 SGPFYVHP 154
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 2 GGTFYVEP 9
G FYV P
Sbjct: 147 SGPFYVHP 154
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 2 GGTFYVEP 9
G FYV P
Sbjct: 147 SGPFYVHP 154
>sp|VL2_HPV36|MINOR capsid protein L2|Human papillomavirus 36
Query: 1 RGGTFYVE 8
R G++YV+
Sbjct: 456 RSGSYYVQ 463
>sp|VL2_HPV21|MINOR capsid protein L2|Human papillomavirus 21
Query: 1 RGGTFYVE 8
R G++YV+
Sbjct: 456 RSGSYYVQ 463
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 RGGTFYVE 8
RG TF+ E
Sbjct: 282 RGATFFGE 289
>sp|UL06_HCMVA|UNCHARACTERIZED protein UL6|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GGTFY 6
GGT+Y
Sbjct: 153 GGTYY 157
>sp|UL06_HCMVM|UNCHARACTERIZED protein UL6|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GGTFY 6
GGT+Y
Sbjct: 149 GGTYY 153
>sp|VL2_HPV6B|MINOR capsid protein L2|Human papillomavirus type 6b
Query: 2 GGTFYVEPA 10
G FY+ PA
Sbjct: 431 GSGFYLHPA 439
28|Sequence|136|145|YVEPAERYIK
>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 3 EPAERYIK 10
EP E+YI+
Sbjct: 391 EPLEKYIQ 398
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 YVEPAER 7
YV P ER
Sbjct: 1501 YVSPGER 1507
>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 3 EPAERYIK 10
EP E+YI+
Sbjct: 391 EPLEKYIQ 398
>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann
Query: 3 EPAERYIK 10
EP E+YI+
Sbjct: 391 EPLEKYIQ 398
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 YVEPAER 7
YV P ER
Sbjct: 1501 YVSPGER 1507
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 YVEPAER 7
YV P ER
Sbjct: 1506 YVSPGER 1512
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 VEPAERYI 9
+EP +RYI
Sbjct: 749 MEPGKRYI 756
>sp|NS1_I89A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Beijing/352/1989
Query: 4 PAERYI 9
PA RYI
Sbjct: 85 PASRYI 90
>sp|NS1_I83A8|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong
Query: 4 PAERYI 9
PA RYI
Sbjct: 85 PASRYI 90
>sp|NS1_I80A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/4/1980
Query: 4 PAERYI 9
PA RYI
Sbjct: 85 PASRYI 90
>sp|NS1_I78A8|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/18/1978
Query: 4 PAERYI 9
PA RYI
Sbjct: 85 PASRYI 90
>sp|NS1_I78A7|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/2/1978
Query: 4 PAERYI 9
PA RYI
Sbjct: 85 PASRYI 90
>sp|NS1_I77A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 4 PAERYI 9
PA RYI
Sbjct: 85 PASRYI 90
>sp|NS1_I77A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Alaska/6/1977
Query: 4 PAERYI 9
PA RYI
Sbjct: 85 PASRYI 90
>sp|NS1_I76A6|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/110/1976
Query: 4 PAERYI 9
PA RYI
Sbjct: 85 PASRYI 90
>sp|NS1_I75A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Beijing/39/1975
Query: 4 PAERYI 9
PA RYI
Sbjct: 85 PASRYI 90
>sp|NS1_I73A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Port
Query: 4 PAERYI 9
PA RYI
Sbjct: 85 PASRYI 90
>sp|NS1_I72A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/101/1972
Query: 4 PAERYI 9
PA RYI
Sbjct: 85 PASRYI 90
>sp|NS1_I72A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/102/1972
Query: 4 PAERYI 9
PA RYI
Sbjct: 85 PASRYI 90
>sp|NS1_I72A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Udorn/307/1972
Query: 4 PAERYI 9
PA RYI
Sbjct: 85 PASRYI 90
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 EPAERYI 9
EP +RYI
Sbjct: 750 EPGKRYI 756
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 EPAERYI 9
EP +RYI
Sbjct: 750 EPGKRYI 756
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 EPAERYI 9
EP +RYI
Sbjct: 748 EPGKRYI 754
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 EPAERYI 9
EP +RYI
Sbjct: 749 EPGKRYI 755
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 EPAERYI 9
EP +RYI
Sbjct: 751 EPGKRYI 757
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 EPAERYI 9
EP +RYI
Sbjct: 750 EPGKRYI 756
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 EPAERYI 9
EP +RYI
Sbjct: 750 EPGKRYI 756
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 EPAERYI 9
EP +RYI
Sbjct: 751 EPGKRYI 757
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 EPAERYI 9
EP +RYI
Sbjct: 749 EPGKRYI 755
>sp|GM_EBVA8|ENVELOPE glycoprotein M|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 YVEPAERYI 9
Y+EP E ++
Sbjct: 71 YLEPPEMFV 79
>sp|GM_EBVG|ENVELOPE glycoprotein M|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 YVEPAERYI 9
Y+EP E ++
Sbjct: 71 YLEPPEMFV 79
>sp|GM_EBVB9|ENVELOPE glycoprotein M|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 YVEPAERYI 9
Y+EP E ++
Sbjct: 71 YLEPPEMFV 79
>sp|SCAF_EBVG|CAPSID scaffolding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 PAERYIK 10
PAE Y+K
Sbjct: 228 PAESYLK 234
>sp|SCAF_EBVB9|CAPSID scaffolding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 PAERYIK 10
PAE Y+K
Sbjct: 228 PAESYLK 234
>sp|SCAF_EBVA8|CAPSID scaffolding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 PAERYIK 10
PAE Y+K
Sbjct: 228 PAESYLK 234
>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13
Query: 4 PAERYIK 10
PAE Y+K
Sbjct: 269 PAELYVK 275
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 4 PAERYI 9
P ERY+
Sbjct: 570 PVERYV 575
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 EPAERYI 9
EP +RY+
Sbjct: 749 EPEKRYV 755
29|Sequence|141|150|ERYIKDRTLP
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYIKDRTL 9
ERY+KD+ L
Sbjct: 584 ERYLKDQQL 592
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYIKDRTL 9
ERY+KD+ L
Sbjct: 583 ERYLKDQQL 591
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYIKDRTL 9
ERY+KD+ L
Sbjct: 560 ERYLKDQQL 568
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYIKDRTL 9
ERY+KD+ L
Sbjct: 587 ERYLKDQQL 595
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYIKDRTL 9
ERY+KD+ L
Sbjct: 578 ERYLKDQQL 586
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYIKDRTL 9
ERY+KD+ L
Sbjct: 576 ERYLKDQQL 584
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYIKDRTL 9
ERY+KD+ L
Sbjct: 582 ERYLKDQQL 590
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYIKDRTL 9
ERY+KD+ L
Sbjct: 584 ERYLKDQQL 592
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYIKDRTL 9
ERY+KD+ L
Sbjct: 584 ERYLKDQQL 592
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYIKDRTL 9
ERY+KD+ L
Sbjct: 584 ERYLKDQQL 592
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYIKDRTL 9
ERY+KD+ L
Sbjct: 581 ERYLKDQQL 589
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYIKDRTL 9
ERY+KD+ L
Sbjct: 596 ERYLKDQQL 604
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYIKDRTL 9
ERY+KD+ L
Sbjct: 589 ERYLKDQQL 597
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYIKDRTL 9
ERY+KD+ L
Sbjct: 579 ERYLKDQQL 587
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYIKDRTL 9
ERY+KD+ L
Sbjct: 584 ERYLKDQQL 592
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYIKDRTL 9
ERY+KD+ L
Sbjct: 570 ERYLKDQQL 578
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYIKDRTL 9
ERY+KD+ L
Sbjct: 570 ERYLKDQQL 578
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYIKDRTL 9
ERY+KD+ L
Sbjct: 574 ERYLKDQQL 582
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYIKDRTL 9
ERY+KD+ L
Sbjct: 576 ERYLKDQQL 584
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYIKDRTL 9
ERY+KD+ L
Sbjct: 595 ERYLKDQQL 603
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYIKDRTL 9
ERY+KD+ L
Sbjct: 581 ERYLKDQQL 589
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYIKDRTL 9
ERY+KD+ L
Sbjct: 578 ERYLKDQQL 586
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYIKDRTL 9
ERY+KD+ L
Sbjct: 575 ERYLKDQQL 583
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYIKDRTL 9
ERY+KD+ L
Sbjct: 585 ERYLKDQQL 593
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYIKDRTL 9
ERY+KD+ L
Sbjct: 590 ERYLKDQQL 598
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYIKDRTL 9
ERY+KD+ L
Sbjct: 580 ERYLKDQQL 588
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYIKDRTL 9
ERY+KD+ L
Sbjct: 583 ERYLKDQQL 591
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYIKDRTL 9
ERY+KD+ L
Sbjct: 571 ERYLKDQQL 579
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 ERYIKDRTLP 10
ER+ KDR P
Sbjct: 1043 ERWKKDRGAP 1052
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 ERYIKDRTLP 10
ER+ KDR P
Sbjct: 1043 ERWKKDRGAP 1052
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 ERYIKDRTL 9
E+Y+KD+ L
Sbjct: 586 EKYLKDQAL 594
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYIKDRTL 9
E Y+KD+ L
Sbjct: 591 ESYLKDQQL 599
>sp|KBTB2_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 1 ERYIKDRT 8
E YIKD T
Sbjct: 116 ESYIKDYT 123
>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 ERYIKDR 7
E+Y+KD+
Sbjct: 577 EKYLKDQ 583
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 ERYIKDR 7
E+Y+KD+
Sbjct: 573 EKYLKDQ 579
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 ERYIKDR 7
E+Y+KD+
Sbjct: 574 EKYLKDQ 580
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 ERYIKDR 7
E+Y+KD+
Sbjct: 577 EKYLKDQ 583
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 ERYIKDR 7
E+Y+KD+
Sbjct: 574 EKYLKDQ 580
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 ERYIKDR 7
E+Y+KD+
Sbjct: 585 EKYLKDQ 591
>sp|X_HBVH1|PROTEIN X|Hepatitis B virus genotype H
Query: 1 ERYIKD 6
E YIKD
Sbjct: 109 EEYIKD 114
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 ERYIKDR 7
E+Y+KD+
Sbjct: 581 EKYLKDQ 587
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 ERYIKDR 7
E+Y+KD+
Sbjct: 584 EKYLKDQ 590
>sp|X_HBVF4|PROTEIN X|Hepatitis B virus genotype F2
Query: 1 ERYIKD 6
E YIKD
Sbjct: 109 EEYIKD 114
>sp|X_HBVH3|PROTEIN X|Hepatitis B virus genotype H
Query: 1 ERYIKD 6
E YIKD
Sbjct: 109 EEYIKD 114
>sp|X_HBVF1|PROTEIN X|Hepatitis B virus genotype F2
Query: 1 ERYIKD 6
E YIKD
Sbjct: 109 EEYIKD 114
30|Sequence|146|155|DRTLPFHSVI
>sp|HEMA_I68A5|HEMAGGLUTININ A virus (strain A/Korea/426/1968
Query: 1 DRTLPFHSV 9
+ TLPFH+V
Sbjct: 300 NTTLPFHNV 308
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 445 ERTLDFH 451
>sp|HEMA_I60A0|HEMAGGLUTININ A virus (strain A/Ann
Query: 1 DRTLPFHSV 9
+ TLPFH+V
Sbjct: 300 NTTLPFHNV 308
>sp|HEMA_I57A5|HEMAGGLUTININ A virus (strain A/Singapore/1/1957
Query: 1 DRTLPFHSV 9
+ TLPFH+V
Sbjct: 300 NTTLPFHNV 308
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 445 ERTLDFH 451
>sp|HEMA_I57A0|HEMAGGLUTININ A virus (strain A/Japan/305/1957
Query: 1 DRTLPFHSV 9
+ TLPFH+V
Sbjct: 300 NTTLPFHNV 308
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 445 ERTLDFH 451
>sp|VE6_HPV14|PROTEIN E6|Human papillomavirus 14
Query: 2 RTLPFHSV 9
R LPFH V
Sbjct: 149 RKLPFHKV 156
>sp|VE6_HPV19|PROTEIN E6|Human papillomavirus 19
Query: 2 RTLPFHSV 9
R LPFH V
Sbjct: 141 RRLPFHKV 148
>sp|HEMA_I78A3|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 1 DRTLPFHSV 9
+ TLPFH++
Sbjct: 300 NTTLPFHNI 308
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 445 ERTLDFH 451
>sp|VE6_HPV5B|PROTEIN E6|Human papillomavirus type 5b
Query: 2 RTLPFHSV 9
R LPFH V
Sbjct: 132 RGLPFHKV 139
>sp|VE6_HPV47|PROTEIN E6|Human papillomavirus 47
Query: 2 RTLPFHSV 9
R LPFH V
Sbjct: 131 RGLPFHKV 138
>sp|VE6_HPV12|PROTEIN E6|Human papillomavirus 12
Query: 2 RTLPFHSV 9
R LPFH V
Sbjct: 130 RGLPFHKV 137
>sp|VE6_HPV05|PROTEIN E6|Human papillomavirus 5
Query: 2 RTLPFHSV 9
R LPFH V
Sbjct: 132 RGLPFHKV 139
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 1 DRTLPFH 7
D T+PFH
Sbjct: 704 DETVPFH 710
>sp|VE6_HPV36|PROTEIN E6|Human papillomavirus 36
Query: 2 RTLPFHSV 9
R LPFH V
Sbjct: 132 RGLPFHRV 139
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 TLPFHSV 9
T+PFHS+
Sbjct: 69 TVPFHSI 75
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 TLPFHSV 9
T+PFHS+
Sbjct: 69 TVPFHSI 75
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 TLPFHSV 9
T+PFHS+
Sbjct: 69 TVPFHSI 75
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 TLPFHSV 9
T+PFHS+
Sbjct: 69 TVPFHSI 75
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 TLPFHSV 9
T+PFHS+
Sbjct: 69 TVPFHSI 75
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 DRTLPFH 7
+ TLPFH
Sbjct: 702 EETLPFH 708
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 1 DRTLPFH 7
+ TLPFH
Sbjct: 702 EETLPFH 708
>sp|NSP2_ROTGA|NON-STRUCTURAL protein 2|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)
Query: 2 RTLPFHSVI 10
RT+P+H ++
Sbjct: 235 RTVPYHELL 243
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 2 RTLPFHSVI 10
R LP HS++
Sbjct: 25 RPLPLHSIL 33
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 3 TLPFHSVI 10
T+PFH+ +
Sbjct: 289 TIPFHTTM 296
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 3 TLPFHSVI 10
T+PFH+ +
Sbjct: 289 TIPFHTTM 296
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 3 TLPFHSVI 10
T+PFH+ +
Sbjct: 290 TIPFHTTM 297
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 3 TLPFHSVI 10
T+PFH+ +
Sbjct: 289 TIPFHTTM 296
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 3 TLPFHSVI 10
T+PFH+ +
Sbjct: 289 TIPFHTTM 296
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 3 TLPFHSVI 10
T+PFH+ +
Sbjct: 289 TIPFHTTM 296
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 3 TLPFHSVI 10
T+PFH+ +
Sbjct: 289 TIPFHTTM 296
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 3 TLPFHSVI 10
T+PFH+ +
Sbjct: 290 TIPFHTTM 297
>sp|HEMA_I33A0|HEMAGGLUTININ A virus (strain A/Wilson-Smith/1933
Query: 1 DRTLPFHSV 9
+RTL FH +
Sbjct: 448 ERTLDFHDL 456
>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 DRTLPFHSV 9
+ ++PFH++
Sbjct: 302 NSSMPFHNI 310
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 451 ERTLDFH 457
>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 DRTLPFHSV 9
+ ++PFH++
Sbjct: 302 NSSMPFHNI 310
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 451 ERTLDFH 457
>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996
Query: 1 DRTLPFHSV 9
+ ++PFH++
Sbjct: 302 NSSMPFHNI 310
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 451 ERTLDFH 457
>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959
Query: 1 DRTLPFHSV 9
+ ++PFH++
Sbjct: 302 NSSMPFHNI 310
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 447 ERTLDFH 453
>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005
Query: 1 DRTLPFHSV 9
+ ++PFH++
Sbjct: 302 NSSMPFHNI 310
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 450 ERTLDFH 456
>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003
Query: 1 DRTLPFHSV 9
+ ++PFH++
Sbjct: 302 NSSMPFHNI 310
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 451 ERTLDFH 457
>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 DRTLPFHSV 9
+ ++PFH++
Sbjct: 302 NSSMPFHNI 310
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 451 ERTLDFH 457
>sp|HEMA_I02A7|HEMAGGLUTININ A virus (strain A/Teal/China/2978.1/2002
Query: 1 DRTLPFHSV 9
+ ++PFH++
Sbjct: 298 NSSMPFHNI 306
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 447 ERTLDFH 453
>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 DRTLPFHSV 9
+ ++PFH++
Sbjct: 294 NSSMPFHNI 302
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 443 ERTLDFH 449
>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 DRTLPFHSV 9
+ ++PFH++
Sbjct: 302 NSSMPFHNI 310
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 451 ERTLDFH 457
>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky
Query: 1 DRTLPFHSV 9
+ ++PFH++
Sbjct: 302 NSSMPFHNI 310
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 451 ERTLDFH 457
>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 DRTLPFHSV 9
+ ++PFH++
Sbjct: 302 NSSMPFHNI 310
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 451 ERTLDFH 457
>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 DRTLPFHSV 9
+ ++PFH++
Sbjct: 302 NSSMPFHNI 310
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 451 ERTLDFH 457
>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea
Query: 1 DRTLPFHSV 9
+ ++PFH++
Sbjct: 300 NSSMPFHNI 308
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 449 ERTLDFH 455
>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 DRTLPFHSV 9
+ ++PFH++
Sbjct: 291 NSSMPFHNI 299
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 440 ERTLDFH 446
>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 DRTLPFHSV 9
+ ++PFH++
Sbjct: 291 NSSMPFHNI 299
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 440 ERTLDFH 446
>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 DRTLPFHSV 9
+ ++PFH++
Sbjct: 291 NSSMPFHNI 299
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 440 ERTLDFH 446
>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky
Query: 1 DRTLPFHSV 9
+ ++PFH++
Sbjct: 291 NSSMPFHNI 299
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 440 ERTLDFH 446
>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 1 DRTLPFHSV 9
+ ++PFH++
Sbjct: 302 NSSMPFHNI 310
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 451 ERTLDFH 457
>sp|HEMA_I96A3|HEMAGGLUTININ A virus (strain A/China:Nanchang/11/1996
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 448 ERTLDFH 454
>sp|HEMA_I96A2|HEMAGGLUTININ A virus (strain A/USA:Memphis/10/1996
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 449 ERTLDFH 455
>sp|HEMA_I85A4|HEMAGGLUTININ A virus (strain A/Swine/Netherlands/12/1985
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 449 ERTLDFH 455
>sp|HEMA_I83A1|HEMAGGLUTININ A virus (strain A/Chile/1/1983
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 449 ERTLDFH 455
>sp|HEMA_I81A3|HEMAGGLUTININ A virus (strain A/Turkey/Minnesota/1661/1981
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 449 ERTLDFH 455
>sp|HEMA_I80AA|HEMAGGLUTININ A virus (strain A/India/6263/1980
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 449 ERTLDFH 455
>sp|HEMA_I80A1|HEMAGGLUTININ A virus (strain A/Duck/Australia/749/1980
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 449 ERTLDFH 455
>sp|HEMA_I79A4|HEMAGGLUTININ A virus (strain A/Kiev/59/1979
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 449 ERTLDFH 455
>sp|HEMA_I77AB|HEMAGGLUTININ A virus (strain A/USSR/90/1977
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 449 ERTLDFH 455
>sp|HEMA_I77AA|HEMAGGLUTININ A virus (strain A/Brazil/11/1978
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 449 ERTLDFH 455
>sp|HEMA_I76AI|HEMAGGLUTININ A virus (strain A/Swine/New
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 449 ERTLDFH 455
>sp|HEMA_I76A4|HEMAGGLUTININ A virus (strain A/Duck/Alberta/35/1976
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 449 ERTLDFH 455
>sp|HEMA_I67A2|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 449 ERTLDFH 455
>sp|HEMA_I61A1|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 449 ERTLDFH 455
>sp|HEMA_I54A2|HEMAGGLUTININ A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 449 ERTLDFH 455
>sp|HEMA_I54A0|HEMAGGLUTININ A virus (strain A/Leningrad/1/1954
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 449 ERTLDFH 455
>sp|HEMA_I51A0|HEMAGGLUTININ A virus (strain A/USA:Albany/12/1951
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 449 ERTLDFH 455
>sp|HEMA_I45A0|HEMAGGLUTININ A virus (strain A/USA:Huston/AA/1945
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 449 ERTLDFH 455
>sp|HEMA_I43A0|HEMAGGLUTININ A virus (strain A/USA:Iowa/1943
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 448 ERTLDFH 454
>sp|HEMA_I40A0|HEMAGGLUTININ A virus (strain A/Hickox/1940
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 449 ERTLDFH 455
>sp|HEMA_I36A0|HEMAGGLUTININ A virus (strain A/Henry/1936
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 449 ERTLDFH 455
>sp|HEMA_I35A3|HEMAGGLUTININ A virus (strain A/USA:Phila/1935
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 449 ERTLDFH 455
>sp|HEMA_I34A1|HEMAGGLUTININ A virus (strain A/Puerto
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 448 ERTLDFH 454
>sp|HEMA_I30A0|HEMAGGLUTININ A virus (strain A/Swine/Iowa/15/1930
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 449 ERTLDFH 455
>sp|HEMA_I18A0|HEMAGGLUTININ A virus (strain A/Brevig
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 449 ERTLDFH 455
>sp|HEMA_I07A0|HEMAGGLUTININ A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 448 ERTLDFH 454
>sp|HEMA_I06A0|HEMAGGLUTININ A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 448 ERTLDFH 454
>sp|HEMA_I00A1|HEMAGGLUTININ A virus (strain A/New
Query: 1 DRTLPFH 7
+RTL FH
Sbjct: 448 ERTLDFH 454
>sp|NS8B_SARS|ORF8B protein|Severe acute respiratory syndrome coronavirus
Query: 2 RTLPFH 7
+ LPFH
Sbjct: 26 KVLPFH 31
>sp|TAX_HTL1F|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 4 LPFHSVI 10
LPFHS +
Sbjct: 235 LPFHSTL 241
>sp|TAX_HTL1C|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 4 LPFHSVI 10
LPFHS +
Sbjct: 235 LPFHSTL 241
>sp|TAX_HTL1A|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 4 LPFHSVI 10
LPFHS +
Sbjct: 235 LPFHSTL 241
>sp|TAX_HTLV2|PROTEIN Tax-2|Human T-cell leukemia virus 2
Query: 4 LPFHSVI 10
LP+HS++
Sbjct: 235 LPYHSIL 241
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 4 LPFHSVI 10
LPF+SV+
Sbjct: 774 LPFNSVV 780
31|Sequence|151|160|FHSVIYHEDD
>sp|PG056_VACCC|PROTEIN OPG056|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 VIYHEDD 10
V+YH+DD
Sbjct: 498 VVYHDDD 504
>sp|PG056_VACCA|PROTEIN OPG056|Vaccinia virus (strain Ankara) (VACV)
Query: 4 VIYHEDD 10
V+YH+DD
Sbjct: 498 VVYHDDD 504
>sp|PG056_MONPV|PROTEIN OPG056|Monkeypox virus (MPXV)
Query: 4 VIYHEDD 10
V+YH+DD
Sbjct: 498 VVYHDDD 504
>sp|PG056_VAR67|PROTEIN OPG056|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 VIYHEDD 10
V+YH+DD
Sbjct: 498 VVYHDDD 504
>sp|PG056_VACCP|PROTEIN OPG056|Vaccinia virus (strain L-IVP) (VACV)
Query: 4 VIYHEDD 10
V+YH+DD
Sbjct: 498 VVYHDDD 504
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 FHSVIYH 7
FH +YH
Sbjct: 1974 FHGALYH 1980
>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FHSVIYHED 9
FH+ ++H D
Sbjct: 414 FHTDMFHHD 422
>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FHSVIYHED 9
FH+ ++H D
Sbjct: 414 FHTDMFHHD 422
>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 FHSVIYHED 9
FH+ ++H D
Sbjct: 414 FHTDMFHHD 422
>sp|NSP1B_ROTGA|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate
Query: 3 SVIYHEDD 10
S+I+H++D
Sbjct: 298 SIIFHDND 305
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 IYHEDD 10
+YHE+D
Sbjct: 992 LYHEED 997
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 SVIYHE 8
S IYHE
Sbjct: 245 STIYHE 250
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 SVIYHE 8
S IYHE
Sbjct: 245 STIYHE 250
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 IYHEDD 10
+YHE+D
Sbjct: 992 LYHEED 997
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 IYHEDD 10
+YHE+D
Sbjct: 992 LYHEED 997
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 IYHEDD 10
+YHE+D
Sbjct: 992 LYHEED 997
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 SVIYHE 8
S IYHE
Sbjct: 245 STIYHE 250
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 SVIYHE 8
S IYHE
Sbjct: 245 STIYHE 250
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 IYHEDD 10
+YHE+D
Sbjct: 992 LYHEED 997
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 3 SVIYHEDD 10
S++Y DD
Sbjct: 211 SIVYEADD 218
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 SVIYHEDD 10
S++Y DD
Sbjct: 211 SIVYEADD 218
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 SVIYHEDD 10
S++Y DD
Sbjct: 211 SIVYEADD 218
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 2 HSVIYHED 9
HS+ ++ED
Sbjct: 616 HSINFYED 623
>sp|HEPA_HHV8P|DNA helicase/primase complex-associated protein|Human herpesvirus 8
Query: 1 FHSVIYHE 8
+HS IY E
Sbjct: 154 WHSSIYRE 161
>sp|VE2_HPV48|REGULATORY protein E2|Human papillomavirus type 48
Query: 5 IYHEDD 10
IY++DD
Sbjct: 142 IYYQDD 147
>sp|VE2_HPV14|REGULATORY protein E2|Human papillomavirus 14
Query: 5 IYHEDD 10
IY++DD
Sbjct: 137 IYYQDD 142
>sp|NSS_HTRV|NON-STRUCTURAL protein NS-S|Heartland virus (HTRV)
Query: 1 FHSVIYHEDD 10
H++I H+++
Sbjct: 269 LHNIIMHDEE 278
>sp|VE2_HPV60|REGULATORY protein E2|Human papillomavirus type 60
Query: 5 IYHEDD 10
IY++DD
Sbjct: 139 IYYQDD 144
>sp|VE2_HPV50|REGULATORY protein E2|Human papillomavirus type 50
Query: 2 HSVIYHEDD 10
+ IY++DD
Sbjct: 140 YEYIYYQDD 148
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 HSVIYHEDD 10
+ ++YHE++
Sbjct: 5232 YPLVYHENE 5240
32|Sequence|156|165|YHEDDINYPH
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 2 HEDDINYP 9
H DD NYP
Sbjct: 106 HSDDTNYP 113
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 2 HEDDINYP 9
H DD NYP
Sbjct: 106 HSDDTNYP 113
>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 2 HEDDINYP 9
H DD NYP
Sbjct: 106 HSDDTNYP 113
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 2 HEDDINYP 9
H DD NYP
Sbjct: 106 HSDDTNYP 113
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 5 DINYPH 10
DINYP+
Sbjct: 1549 DINYPN 1554
>sp|GAAP_VACCL|GOLGI anti-apoptotic protein|Vaccinia virus (strain Lister) (VACV)
Query: 3 EDDINY 8
EDD NY
Sbjct: 13 EDDFNY 18
>sp|GAAP_VACC8|GOLGI anti-apoptotic protein|Vaccinia virus (strain LC16m8) (VACV)
Query: 3 EDDINY 8
EDD NY
Sbjct: 13 EDDFNY 18
>sp|GAAP_VACC0|GOLGI anti-apoptotic protein|Vaccinia virus (strain LC16m0) (VACV)
Query: 3 EDDINY 8
EDD NY
Sbjct: 13 EDDFNY 18
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 YHEDDINYP 9
Y DDI YP
Sbjct: 874 YVVDDIYYP 882
>sp|CVC2_HHV11|CAPSID vertex component 2|Human herpesvirus 1 (strain 17)
Query: 2 HEDDIN 7
H DDIN
Sbjct: 348 HHDDIN 353
>sp|SPIKE_ADE31|FIBER protein|Human adenovirus A serotype 31
Query: 5 DINYP 9
D+NYP
Sbjct: 287 DVNYP 291
>sp|SPIKE_ADE12|FIBER protein|Human adenovirus A serotype 12
Query: 5 DINYP 9
D+NYP
Sbjct: 318 DVNYP 322
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 YHEDDINYP 9
Y DDI YP
Sbjct: 874 YVVDDIYYP 882
>sp|VSGP_TAFVC|PRE-SMALL/SECRETED glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 1 YHEDDINY 8
YH INY
Sbjct: 213 YHTTTINY 220
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 1 YHEDDINY 8
Y++DDI+Y
Sbjct: 516 YYKDDISY 523
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 1 YHEDDINY 8
Y++DDI+Y
Sbjct: 516 YYKDDISY 523
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 1 YHEDDINY 8
Y++DDI+Y
Sbjct: 516 YYKDDISY 523
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 1 YHEDDINY 8
Y++DDI+Y
Sbjct: 516 YYKDDISY 523
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 YHEDDINY 8
Y++DDI+Y
Sbjct: 516 YYKDDISY 523
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 YHEDDINY 8
Y++DDI+Y
Sbjct: 516 YYKDDISY 523
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 YHEDDINY 8
Y++DDI+Y
Sbjct: 508 YYKDDISY 515
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 1 YHEDDINY 8
Y++DDI+Y
Sbjct: 516 YYKDDISY 523
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 1 YHEDDINY 8
Y++DDI+Y
Sbjct: 516 YYKDDISY 523
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 2 HEDDINY 8
H+D INY
Sbjct: 346 HDDIINY 352
>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New
Query: 4 DDINYP 9
DDI YP
Sbjct: 102 DDICYP 107
>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao
Query: 4 DDINYP 9
DDI YP
Sbjct: 102 DDICYP 107
>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973
Query: 4 DDINYP 9
DDI YP
Sbjct: 102 DDICYP 107
>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973
Query: 4 DDINYP 9
DDI YP
Sbjct: 102 DDICYP 107
>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972
Query: 4 DDINYP 9
DDI YP
Sbjct: 102 DDICYP 107
>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966
Query: 4 DDINYP 9
DDI YP
Sbjct: 102 DDICYP 107
>sp|CVC2_HHV2H|CAPSID vertex component 2|Human herpesvirus 2 (strain HG52)
Query: 2 HEDDIN 7
H DD+N
Sbjct: 353 HRDDVN 358
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 2 HEDDINYP 9
HED+ YP
Sbjct: 1886 HEDERIYP 1893
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 2 HEDDINYP 9
HED+ YP
Sbjct: 1886 HEDERIYP 1893
>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain Merlin)
Query: 1 YHEDDIN 7
YH DIN
Sbjct: 200 YHGTDIN 206
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 YHEDDINYP 9
YH D YP
Sbjct: 193 YHFKDPQYP 201
>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 1 YHEDDINY 8
YH INY
Sbjct: 213 YHTTTINY 220
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 4 DDINYPH 10
DDIN P+
Sbjct: 156 DDINVPN 162
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate
Query: 4 DDINYPH 10
DDIN P+
Sbjct: 156 DDINVPN 162
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 YHEDDINYP 9
YH D YP
Sbjct: 193 YHFKDPQYP 201
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 YHEDDINYP 9
YH D YP
Sbjct: 193 YHFKDPQYP 201
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 YHEDDINYP 9
YH D YP
Sbjct: 193 YHFKDPQYP 201
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 YHEDDINYP 9
YH D YP
Sbjct: 193 YHFKDPQYP 201
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 YHEDDINYP 9
YH D YP
Sbjct: 193 YHFKDPQYP 201
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 YHEDDINYP 9
YH D YP
Sbjct: 193 YHFKDPQYP 201
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 YHEDDINYP 9
YH D YP
Sbjct: 193 YHFKDPQYP 201
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 DDINYPH 10
DDIN P+
Sbjct: 156 DDINVPN 162
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 4 DDINYPH 10
DDIN P+
Sbjct: 156 DDINVPN 162
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 4 DDINYPH 10
DDIN P+
Sbjct: 156 DDINVPN 162
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 YHEDDINYP 9
YH D YP
Sbjct: 193 YHFKDPQYP 201
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 YHEDDINYP 9
YH D YP
Sbjct: 193 YHFKDPQYP 201
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 YHEDDINYP 9
YH D YP
Sbjct: 193 YHFKDPQYP 201
>sp|VE2_HPV60|REGULATORY protein E2|Human papillomavirus type 60
Query: 1 YHEDDINYPH 10
Y++DDI H
Sbjct: 140 YYQDDIEQWH 149
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 2 HEDDINYP 9
HE++ YP
Sbjct: 568 HEEERTYP 575
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 2 HEDDINYP 9
HE++ YP
Sbjct: 1899 HEEERTYP 1906
>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989
Query: 2 HEDDINYP 9
HE + YP
Sbjct: 171 HESEYKYP 178
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 YHEDDINYP 9
YH D YP
Sbjct: 172 YHFKDPQYP 180
>sp|NCAP_PIV5|NUCLEOPROTEIN virus 5 (strain W3)
Query: 2 HEDDIN 7
H DD+N
Sbjct: 496 HTDDLN 501
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 4 DDINYPH 10
DD++ PH
Sbjct: 1751 DDVSSPH 1757
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 4 DDINYPH 10
DD++ PH
Sbjct: 1751 DDVSSPH 1757
>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)
Query: 3 EDDINY 8
ED +NY
Sbjct: 159 EDSVNY 164
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 3 EDDINYP 9
+DD+ YP
Sbjct: 44 DDDVFYP 50
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 2 HEDDIN 7
H+DDI+
Sbjct: 1829 HDDDID 1834
>sp|VGLI_HCMVA|UL37 immediate early glycoprotein|Human cytomegalovirus (strain AD169)
Query: 1 YHEDDIN 7
YH D+N
Sbjct: 200 YHGTDVN 206
>sp|NCAP_VSIVG|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 2 HEDDINYP 9
+ED + YP
Sbjct: 21 NEDPVEYP 28
>sp|NCAP_VSIVS|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 2 HEDDINYP 9
+ED + YP
Sbjct: 21 NEDPVEYP 28
33|Sequence|161|170|INYPHKYGPQ
>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 5 HKYGPQ 10
HKYGP+
Sbjct: 358 HKYGPR 363
>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 HKYGPQ 10
HKYGP+
Sbjct: 373 HKYGPR 378
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 2 NYPHKYGPQ 10
N P+KY PQ
Sbjct: 658 NEPYKYWPQ 666
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 NYPHKYGPQ 10
N P+KY PQ
Sbjct: 658 NEPYKYWPQ 666
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 2 NYPHKYGPQ 10
N P+KY PQ
Sbjct: 658 NEPYKYWPQ 666
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 NYPHKYGPQ 10
N P+KY PQ
Sbjct: 657 NDPYKYWPQ 665
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 NYPHKYGPQ 10
N P+KY PQ
Sbjct: 657 NDPYKYWPQ 665
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 NYPHKYGPQ 10
N P+KY PQ
Sbjct: 657 NDPYKYWPQ 665
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 3 YPHKYGP 9
YPH GP
Sbjct: 872 YPHVLGP 878
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 NYPHKYGP 9
NY + YGP
Sbjct: 112 NYVYAYGP 119
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 NYPHKYGP 9
NY + YGP
Sbjct: 112 NYVYAYGP 119
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 NYPHKYGP 9
NY + YGP
Sbjct: 112 NYVYAYGP 119
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 2 NYPHKYGPQ 10
N P+KY PQ
Sbjct: 658 NEPYKYWPQ 666
>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)
Query: 2 NYPHKYGPQ 10
+YP GP+
Sbjct: 158 DYPEDVGPE 166
>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)
Query: 2 NYPHKYGPQ 10
+YP GP+
Sbjct: 158 DYPEAVGPE 166
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 3 YPHKY 7
YPH+Y
Sbjct: 256 YPHQY 260
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 3 YPHKYGPQ 10
YP YG Q
Sbjct: 67 YPFDYGGQ 74
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 INYPH 5
IN+PH
Sbjct: 923 INFPH 927
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 3 YPHKYGPQ 10
YP YG Q
Sbjct: 67 YPFDYGGQ 74
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 INYPHKYGPQ 10
++YP++ PQ
Sbjct: 2050 VSYPYELDPQ 2059
>sp|J1I_HCMVA|UNCHARACTERIZED protein HKRFX|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 HKYGPQ 10
H YGPQ
Sbjct: 92 HAYGPQ 97
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 INYPH 5
+N+PH
Sbjct: 923 VNFPH 927
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 INYPH 5
+N+PH
Sbjct: 923 VNFPH 927
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 INYPH 5
+N+PH
Sbjct: 923 VNFPH 927
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 INYPH 5
+N+PH
Sbjct: 923 VNFPH 927
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 INYPH 5
+N+PH
Sbjct: 917 VNFPH 921
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 INYPH 5
+N+PH
Sbjct: 923 VNFPH 927
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 INYPH 5
+N+PH
Sbjct: 923 VNFPH 927
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 INYPHKY 7
I+Y H+Y
Sbjct: 3016 IDYDHEY 3022
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 INYPHKY 7
I+Y H+Y
Sbjct: 3016 IDYDHEY 3022
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 INYPHKY 7
+NY H++
Sbjct: 2260 LNYEHRF 2266
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 INYPH 5
+N+PH
Sbjct: 923 VNFPH 927
>sp|ICP27_HHV6Z|MRNA export factor ICP27 homolog|Human herpesvirus 6B (strain Z29)
Query: 2 NYPHKY 7
N PH+Y
Sbjct: 376 NLPHEY 381
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 INYPHKY 7
+NY H++
Sbjct: 2348 LNYDHRF 2354
34|Sequence|166|175|KYGPQGGCAD
>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15
Query: 2 YGPQGGCAD 10
Y P+ GC+D
Sbjct: 8 YDPKEGCSD 16
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 KYGPQGGCAD 10
+YG G C D
Sbjct: 1284 RYGSPGSCTD 1293
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 4 PQGGC 8
PQGGC
Sbjct: 3098 PQGGC 3102
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 KYGPQGGCAD 10
+YG G C D
Sbjct: 1284 RYGTPGSCTD 1293
>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)
Query: 1 KYGPQGGC 8
++GPQG C
Sbjct: 245 RWGPQGPC 252
>sp|UL08_HCMVA|MEMBRANE protein UL8|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 GPQGG 7
GPQGG
Sbjct: 45 GPQGG 49
>sp|UL07_HCMVM|CEACAM1-LIKE protein UL7|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 GPQGG 7
GPQGG
Sbjct: 45 GPQGG 49
>sp|UL07_HCMVA|CEACAM1-LIKE protein UL7|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 GPQGG 7
GPQGG
Sbjct: 45 GPQGG 49
>sp|E321_ADE35|EARLY E3 20.6 kDa glycoprotein|Human adenovirus B serotype 35
Query: 3 GPQGG 7
GPQGG
Sbjct: 35 GPQGG 39
>sp|E321_ADE1P|EARLY E3 20.6 kDa glycoprotein|Human adenovirus B serotype 11
Query: 3 GPQGG 7
GPQGG
Sbjct: 35 GPQGG 39
>sp|E321_ADE1A|EARLY E3 20.2 kDa glycoprotein|Human adenovirus B serotype 11
Query: 3 GPQGG 7
GPQGG
Sbjct: 35 GPQGG 39
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 5 QGGCAD 10
QGGC D
Sbjct: 474 QGGCDD 479
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 5 QGGCAD 10
QGGC D
Sbjct: 479 QGGCDD 484
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 5 QGGCAD 10
QGGC D
Sbjct: 479 QGGCDD 484
>sp|VP2_POVWU|MINOR capsid protein VP2|WU polyomavirus (WUPyV)
Query: 2 YGPQGG 7
Y PQGG
Sbjct: 121 YNPQGG 126
>sp|ORF10_HHV8P|PROTEIN ORF10|Human herpesvirus 8 type P
Query: 1 KYGPQGGC 8
K+GP G C
Sbjct: 392 KHGPGGVC 399
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 QGGCAD 10
+GGC+D
Sbjct: 665 EGGCSD 670
>sp|UL34_HCMVM|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PQGGCA 9
P GGC+
Sbjct: 54 PPGGCS 59
>sp|GL_HCMVP|ENVELOPE glycoprotein L|Human cytomegalovirus (strain PT) (HHV-5)
Query: 1 KYGPQG 6
+YGPQ
Sbjct: 269 RYGPQA 274
>sp|GL_HCMV7|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5160) (HHV-5)
Query: 1 KYGPQG 6
+YGPQ
Sbjct: 269 RYGPQA 274
>sp|UL34_HCMVT|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 4 PQGGCA 9
P GGC+
Sbjct: 54 PPGGCS 59
>sp|UL34_HCMVA|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PQGGCA 9
P GGC+
Sbjct: 54 PPGGCS 59
>sp|GL_HCMV1|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 119) (HHV-5)
Query: 1 KYGPQG 6
+YGPQ
Sbjct: 269 RYGPQA 274
>sp|BHLF1_EBVB9|UNCHARACTERIZED protein BHLF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 PQGGCAD 10
P GGC+D
Sbjct: 106 PTGGCSD 112
>sp|M2_I59A0|MATRIX protein 2|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 1 KYGPQGG 7
KYG +GG
Sbjct: 56 KYGLKGG 62
>sp|GL_HCMVM|ENVELOPE glycoprotein L|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 KYGPQG 6
+YGPQ
Sbjct: 269 RYGPQA 274
>sp|GL_HCMV8|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5508) (HHV-5)
Query: 1 KYGPQG 6
+YGPQ
Sbjct: 269 RYGPQA 274
>sp|GL_HCMV2|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 1042) (HHV-5)
Query: 1 KYGPQG 6
+YGPQ
Sbjct: 269 RYGPQA 274
>sp|GL_HCMV5|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5035) (HHV-5)
Query: 1 KYGPQG 6
+YGPQ
Sbjct: 269 RYGPQA 274
>sp|GL_HCMVA|ENVELOPE glycoprotein L|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 KYGPQG 6
+YGPQ
Sbjct: 269 RYGPQA 274
>sp|NCAP_LASSJ|NUCLEOPROTEIN virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 2 YGPQGGC 8
Y P GC
Sbjct: 403 YQPSSGC 409
>sp|M2_I000X|MATRIX protein 2|Influenza A virus (strain A/X-31
Query: 1 KYGPQGG 7
KYG +GG
Sbjct: 56 KYGLKGG 62
>sp|M2_I06A0|MATRIX protein 2|Influenza A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 KYGPQGG 7
KYG +GG
Sbjct: 56 KYGLKGG 62
>sp|M2_I34A1|MATRIX protein 2|Influenza A virus (strain A/Puerto
Query: 1 KYGPQGG 7
KYG +GG
Sbjct: 56 KYGLKGG 62
>sp|GL_HCMV6|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5040) (HHV-5)
Query: 1 KYGPQG 6
+YGPQ
Sbjct: 269 RYGPQA 274
>sp|GL_HCMV4|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 4654) (HHV-5)
Query: 1 KYGPQG 6
+YGPQ
Sbjct: 269 RYGPQA 274
>sp|NCAP_LASSG|NUCLEOPROTEIN virus (strain GA391) (LASV)
Query: 2 YGPQGGC 8
Y P GC
Sbjct: 404 YQPSSGC 410
>sp|GL_HCMV3|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 2387) (HHV-5)
Query: 1 KYGPQG 6
+YGPQ
Sbjct: 269 RYGPQA 274
>sp|CEP2_HHV6U|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 KYGPQGGCA 9
K P GGC
Sbjct: 161 KLTPLGGCG 169
35|Sequence|171|180|GGCADHSVFE
>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus
Query: 1 GGCADHS 7
GGC +HS
Sbjct: 562 GGCREHS 568
>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)
Query: 2 GCADHSVF 9
GC H VF
Sbjct: 106 GCGKHKVF 113
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 2 GCADHSVF 9
GC H VF
Sbjct: 118 GCGKHKVF 125
>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)
Query: 2 GCADHSVF 9
GC H VF
Sbjct: 105 GCGKHKVF 112
>sp|VE2_HPV69|REGULATORY protein E2|Human papillomavirus 69
Query: 1 GGCADHSVF 9
G C+D +VF
Sbjct: 285 GTCSDQTVF 293
>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 2 GCADHSVF 9
GC H VF
Sbjct: 106 GCGKHKVF 113
>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)
Query: 2 GCADHSVF 9
GC H VF
Sbjct: 105 GCGKHKVF 112
>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 2 GCADHSVF 9
GC H VF
Sbjct: 105 GCGKHKVF 112
>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great
Query: 2 GCADHSVF 9
GC H VF
Sbjct: 106 GCGKHKVF 113
>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 2 GCADHSVF 9
GC H VF
Sbjct: 119 GCGKHKVF 126
>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 2 GCADHSVF 9
GC H VF
Sbjct: 106 GCGKHKVF 113
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 2 GCADHSVF 9
GC H VF
Sbjct: 106 GCGKHKVF 113
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 2 GCADHSVF 9
GC H VF
Sbjct: 106 GCGKHKVF 113
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 2 GCADHSVF 9
GC H VF
Sbjct: 112 GCGKHKVF 119
>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)
Query: 2 GCADHSVF 9
GC H VF
Sbjct: 106 GCGKHKVF 113
>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann
Query: 2 GCADHSVF 9
GC H VF
Sbjct: 119 GCGKHKVF 126
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 2 GCADHSVF 9
GC H VF
Sbjct: 106 GCGKHKVF 113
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 2 GCADHSVF 9
GC H VF
Sbjct: 112 GCGKHKVF 119
>sp|B17_VARV|PROTEIN B17|Variola virus
Query: 3 CADHSV 8
CADH++
Sbjct: 139 CADHAI 144
>sp|B17_VAR67|PROTEIN B17|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 CADHSV 8
CADH++
Sbjct: 139 CADHAI 144
>sp|B17_VACCC|PROTEIN B17|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 CADHSV 8
CADH++
Sbjct: 139 CADHAI 144
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 GCADHSVFE 10
GC D+S F+
Sbjct: 4187 GCCDNSYFD 4195
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 1 GGCADH 6
G CADH
Sbjct: 352 GPCADH 357
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 GGCADHSV 8
G CA HSV
Sbjct: 1134 GKCAVHSV 1141
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 GGCADHSVF 9
GG A H+ F
Sbjct: 389 GGAAGHTAF 397
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 GGCADH 6
G C DH
Sbjct: 1289 GSCTDH 1294
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 GGCADH 6
G C DH
Sbjct: 1289 GSCTDH 1294
>sp|U24_HHV7J|U24 protein|Human herpesvirus 7 (strain JI)
Query: 5 DHSVF 9
DHSVF
Sbjct: 20 DHSVF 24
>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)
Query: 3 CADHS 7
CADH+
Sbjct: 306 CADHA 310
>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 CADHS 7
CADH+
Sbjct: 306 CADHA 310
>sp|HN_PIV5L|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Human/LN)
Query: 2 GCADH 6
GC DH
Sbjct: 184 GCQDH 188
>sp|HN_PIV5D|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI+)
Query: 2 GCADH 6
GC DH
Sbjct: 184 GCQDH 188
>sp|HN_PIV5C|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI-)
Query: 2 GCADH 6
GC DH
Sbjct: 184 GCQDH 188
>sp|HN_PIV5|HEMAGGLUTININ-NEURAMINIDASE virus 5 (strain W3)
Query: 2 GCADH 6
GC DH
Sbjct: 184 GCQDH 188
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 3 CADHSV 8
C++HSV
Sbjct: 154 CSEHSV 159
>sp|GE_HHV2H|ENVELOPE glycoprotein E|Human herpesvirus 2 (strain HG52)
Query: 3 CADHSVFE 10
CAD ++E
Sbjct: 266 CADMRIYE 273
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 3 CADHSV 8
C DHS+
Sbjct: 1231 CVDHSM 1236
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 3 CADHSV 8
C DHS+
Sbjct: 1230 CVDHSM 1235
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 3 CADHSV 8
C DHS+
Sbjct: 1231 CVDHSM 1236
>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)
Query: 2 GCADHSVF 9
GC SVF
Sbjct: 53 GCGTSSVF 60
>sp|YVAA_VACCC|UNCHARACTERIZED 14.1 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 GCADH 6
GC DH
Sbjct: 55 GCCDH 59
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 GGCADHSV 8
GG A H+V
Sbjct: 389 GGSAGHTV 396
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 GGCADHSV 8
G CA HS+
Sbjct: 1134 GKCAVHSL 1141
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 1 GGCADH 6
G C DH
Sbjct: 352 GPCTDH 357
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 1 GGCADHSV 8
G CA HS+
Sbjct: 1135 GKCAVHSM 1142
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 GGCADHSV 8
G CA HS+
Sbjct: 1134 GKCAVHSL 1141
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 GGCADHSVFE 10
G C HS+ E
Sbjct: 38 GNCFYHSIAE 47
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 GGCADHSVFE 10
G C HS+ E
Sbjct: 38 GNCFYHSIAE 47
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 GGCADHSV 8
G CA HS+
Sbjct: 1135 GKCAVHSM 1142
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 1 GGCADHSV 8
G CA HS+
Sbjct: 1135 GKCAVHSM 1142
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 3 CADHSVFE 10
C D +FE
Sbjct: 71 CEDDDIFE 78
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 1 GGCADH 6
G CA+H
Sbjct: 339 GPCAEH 344
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 1 GGCADH 6
G CA+H
Sbjct: 339 GPCAEH 344
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 1 GGCADH 6
G CA+H
Sbjct: 339 GPCAEH 344
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 1 GGCADH 6
G CA+H
Sbjct: 339 GPCAEH 344
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 1 GGCADH 6
G CA+H
Sbjct: 339 GPCAEH 344
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 GGCADH 6
G CA+H
Sbjct: 350 GPCAEH 355
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 GGCADH 6
G CA+H
Sbjct: 350 GPCAEH 355
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 GGCADH 6
G CA+H
Sbjct: 350 GPCAEH 355
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 GGCADH 6
G CA+H
Sbjct: 350 GPCAEH 355
36|Sequence|176|185|HSVFERMRKY
>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)
Query: 1 HSVFERMRKY 10
++++ER R+Y
Sbjct: 371 YTLYERERRY 380
>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 HSVFERMRKY 10
++++ER R+Y
Sbjct: 371 YTLYERERRY 380
>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 1 HSVFERMRKY 10
++++ER R+Y
Sbjct: 371 YTLYERERRY 380
>sp|SEMA_VACCC|SEMAPHORIN-LIKE protein A39|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 HSVFERMRKY 10
H+ FE + KY
Sbjct: 298 HTTFEVIEKY 307
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 3 VFERMRKY 10
+F+R RK+
Sbjct: 1017 IFDRTRKF 1024
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 3 VFERMRKY 10
+F+R RK+
Sbjct: 1017 IFDRTRKF 1024
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 3 VFERMRKY 10
+F+R RK+
Sbjct: 1017 IFDRTRKF 1024
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 3 VFERMRKY 10
+F+R RK+
Sbjct: 1017 IFDRTRKF 1024
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 3 VFERMRKY 10
+F+R RK+
Sbjct: 1017 IFDRTRKF 1024
>sp|VL2_HPV21|MINOR capsid protein L2|Human papillomavirus 21
Query: 4 FERMRKY 10
F+R RKY
Sbjct: 513 FKRRRKY 519
>sp|3BHS_MONPV|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Monkeypox
Query: 4 FERMRKY 10
FER RK+
Sbjct: 335 FERTRKW 341
>sp|3BHS_VACCA|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Vaccinia
Query: 4 FERMRKY 10
FER RK+
Sbjct: 335 FERTRKW 341
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 1 HSVFER 6
HS FER
Sbjct: 288 HSTFER 293
>sp|RDRP_ROTHW|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 HSVFERMRKY 10
H+V E+M Y
Sbjct: 474 HAVVEKMLSY 483
>sp|RDRP_ROTHT|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 HSVFERMRKY 10
H+V E+M Y
Sbjct: 474 HAVVEKMLSY 483
>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 HSVFERMRKY 10
H+V E+M Y
Sbjct: 474 HAVVEKMLSY 483
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 1 HSVFER 6
HS FER
Sbjct: 288 HSTFER 293
>sp|RDRP_ROTWI|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 1 HSVFERMRKY 10
H+V E+M Y
Sbjct: 474 HAVVEKMLSY 483
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 1 HSVFER 6
HS FER
Sbjct: 288 HSTFER 293
>sp|RDRP_ROTYO|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 HSVFERMRKY 10
H+V E+M Y
Sbjct: 474 HAVVEKMLSY 483
>sp|TERM_ADE40|PRETERMINAL protein|Human adenovirus F serotype 40
Query: 3 VFERMRKY 10
+F+R+R Y
Sbjct: 468 LFQRLRNY 475
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 1 HSVFER 6
HS FER
Sbjct: 288 HSTFER 293
>sp|TERM_ADE12|PRETERMINAL protein|Human adenovirus A serotype 12
Query: 3 VFERMRKY 10
+F+R+R Y
Sbjct: 428 LFQRLRNY 435
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 3 VFERMRKY 10
+F+R+R Y
Sbjct: 493 LFQRLRNY 500
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 3 VFERMRKY 10
+F+R+R Y
Sbjct: 493 LFQRLRNY 500
37|Sequence|181|190|RMRKYQMTGV
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 3 RKYQMTGV 10
R Y MTGV
Sbjct: 172 RSYCMTGV 179
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 RMRKYQMTGV 10
++ KY++TGV
Sbjct: 1618 QLPKYRITGV 1627
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 RMRKYQMTGV 10
++ KY++TGV
Sbjct: 1618 QLPKYRITGV 1627
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 RMRKYQMTGV 10
++ KY++TGV
Sbjct: 1618 QLPKYRITGV 1627
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 3 RKYQMTGV 10
R Y MTGV
Sbjct: 172 RTYCMTGV 179
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 3 RKYQMTGV 10
R Y MTGV
Sbjct: 172 RTYCMTGV 179
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 4 KYQMTGV 10
KY++TGV
Sbjct: 1620 KYRITGV 1626
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 KYQMTGV 10
KY++TGV
Sbjct: 1628 KYRITGV 1634
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 KYQMTGV 10
KY++TGV
Sbjct: 1628 KYRITGV 1634
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 KYQMTGV 10
KY++TGV
Sbjct: 1628 KYRITGV 1634
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 KYQMTGV 10
KY++TGV
Sbjct: 1628 KYRITGV 1634
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 2 MRKYQMT 8
+RKYQ T
Sbjct: 882 VRKYQRT 888
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 2 MRKYQMT 8
+RKYQ T
Sbjct: 882 VRKYQRT 888
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 2 MRKYQMT 8
+RKYQ T
Sbjct: 882 VRKYQRT 888
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 2 MRKYQMT 8
+RKYQ T
Sbjct: 883 VRKYQRT 889
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 MRKYQMT 8
+RKYQ T
Sbjct: 883 VRKYQRT 889
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 2 MRKYQMT 8
+RKYQ T
Sbjct: 883 VRKYQRT 889
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank
Query: 2 MRKYQMT 8
+RKYQ T
Sbjct: 882 VRKYQRT 888
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 2 MRKYQMT 8
+RKYQ T
Sbjct: 882 VRKYQRT 888
38|Sequence|186|195|QMTGVEEVTQ
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 3 TGVEEVTQ 10
T VE +TQ
Sbjct: 821 TAVESITQ 828
39|Sequence|191|200|EEVTQIPQEE
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 EEVTQIPQEE 10
+++ +IP+EE
Sbjct: 1201 QKIAEIPKEE 1210
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 EEVTQIPQEE 10
+++ +IP+EE
Sbjct: 1201 QKIAEIPKEE 1210
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 EVTQIPQE 9
E+T +PQ+
Sbjct: 1473 EITTVPQD 1480
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 EEVTQIPQE 9
EE+ IPQ+
Sbjct: 1478 EEIFSIPQK 1486
>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 EEVTQIP 7
EE++QIP
Sbjct: 238 EELSQIP 244
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 3 VTQIPQEE 10
VTQ P+EE
Sbjct: 1519 VTQGPEEE 1526
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 3 VTQIPQEE 10
VTQ P+EE
Sbjct: 1505 VTQGPEEE 1512
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 EEVTQIPQ 8
E+VT IPQ
Sbjct: 379 EDVTSIPQ 386
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 EEVTQIPQEE 10
E+VT+ QEE
Sbjct: 1019 EDVTESVQEE 1028
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 EEVTQIPQEE 10
E+VT+ QEE
Sbjct: 1019 EDVTESVQEE 1028
>sp|VP7_ROTGA|OUTER capsid glycoprotein VP7|Rotavirus B (isolate
Query: 2 EVTQIPQ 8
EVT IP+
Sbjct: 164 EVTDIPE 170
>sp|CAP3_ADE12|PRE-HEXON-LINKING protein IIIa|Human adenovirus A serotype 12
Query: 3 VTQIPQEE 10
VT++PQ E
Sbjct: 180 VTEVPQSE 187
40|Sequence|196|205|IPQEEHAANG
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 IPQEEHAA 8
+P+E H A
Sbjct: 2687 LPEEAHTA 2694
>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 2 PQEEHA 7
PQE+H+
Sbjct: 396 PQEDHS 401
>sp|GH_HHV6Z|ENVELOPE glycoprotein H|Human herpesvirus 6B (strain Z29)
Query: 1 IPQEEHAANG 10
I E H NG
Sbjct: 22 ISDESHCKNG 31
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 IPQEEHAANG 10
IP E +NG
Sbjct: 1093 IPMAERQSNG 1102
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 IPQEEHAANG 10
IP E +NG
Sbjct: 1112 IPMAERQSNG 1121
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 IPQEEHAANG 10
IP E +NG
Sbjct: 1102 IPMAERQSNG 1111
41|Sequence|201|210|HAANGPELLR
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 4 NGPELLR 10
NGPE+L+
Sbjct: 2097 NGPEILK 2103
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 4 NGPELLR 10
NGPE+L+
Sbjct: 2097 NGPEILK 2103
>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)
Query: 2 AANGPELL 9
A +GPELL
Sbjct: 611 AGSGPELL 618
>sp|US03_VZVD|SERINE/THREONINE-PROTEIN kinase US3 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 AANGPELL 9
A N PELL
Sbjct: 247 ATNSPELL 254
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 AANGPELLR 10
A NGP+L +
Sbjct: 2034 AINGPKLCK 2042
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 AANGPELLR 10
A NGP+L +
Sbjct: 2034 AINGPKLCK 2042
>sp|UL37_HHV6G|CAPSID assembly protein UL37 homolog|Human herpesvirus 6A (strain GS)
Query: 2 AANGPELL 9
+ N PELL
Sbjct: 120 SGNSPELL 127
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 AANGPELLR 10
A NGP+L +
Sbjct: 2034 AINGPKLCK 2042
>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)
Query: 2 AANGPELL 9
+ N PELL
Sbjct: 404 SGNSPELL 411
>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 AANGPELL 9
+ N PELL
Sbjct: 404 SGNSPELL 411
>sp|CFLA_MCV1|VIRAL CASP8 and FADD-like apoptosis|Molluscum contagiosum virus subtype 1
Query: 2 AANGPELLR 10
+++ PELLR
Sbjct: 218 SSDSPELLR 226
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 HAANGPELL 9
HA GP +L
Sbjct: 1586 HAKPGPTIL 1594
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 HAANGPELL 9
HA GP +L
Sbjct: 1580 HAKPGPTIL 1588
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 HAANGPELL 9
HA GP +L
Sbjct: 1578 HAKPGPTIL 1586
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 HAANGPELL 9
HA GP +L
Sbjct: 1578 HAKPGPTIL 1586
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 HAANGPELL 9
HA GP +L
Sbjct: 1580 HAKPGPTIL 1588
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 HAANGPELL 9
HA GP +L
Sbjct: 1580 HAKPGPTIL 1588
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 HAANGPELL 9
HA GP +L
Sbjct: 1582 HAKPGPTIL 1590
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 HAANGPELL 9
HA GP +L
Sbjct: 1596 HAKPGPTIL 1604
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 HAANGPELL 9
HA GP +L
Sbjct: 1588 HAKPGPTIL 1596
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 HAANGPELL 9
HA GP +L
Sbjct: 1579 HAKPGPTIL 1587
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 HAANGPELL 9
HA GP +L
Sbjct: 1579 HAKPGPTIL 1587
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 HAANGPELL 9
HA GP +L
Sbjct: 1577 HAKPGPTIL 1585
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 HAANGPELL 9
HA GP +L
Sbjct: 1590 HAKPGPTIL 1598
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 HAANGPELL 9
HA GP +L
Sbjct: 1591 HAKPGPTIL 1599
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 HAANGPELL 9
HA GP +L
Sbjct: 1588 HAKPGPTIL 1596
42|Sequence|206|215|PELLRKKRTT
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 PELLRKKRTT 10
PE+LRKK+ T
Sbjct: 1682 PEMLRKKQIT 1691
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 PELLRKKRTT 10
PE+LRKK+ T
Sbjct: 1686 PEMLRKKQIT 1695
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 PELLRKKRTT 10
PE+LRKK+ T
Sbjct: 1686 PEMLRKKQIT 1695
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 PELLRKKRTT 10
PE+LRK++ T
Sbjct: 1678 PEMLRKRQLT 1687
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 PELLRKKRTT 10
P++L+K+R T
Sbjct: 1678 PDMLKKRRLT 1687
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 PELLRKKRTT 10
PE+L+K++ T
Sbjct: 1684 PEMLKKRQLT 1693
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 PELLRKKRTT 10
P +L+K +TT
Sbjct: 1669 PTMLKKGKTT 1678
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 PELLRKKRTT 10
P +L+K +TT
Sbjct: 1669 PTMLKKGKTT 1678
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 3 LLRKKRT 9
LLRK+RT
Sbjct: 963 LLRKRRT 969
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 1 PELLRKKR 8
PEL +K+R
Sbjct: 333 PELPKKRR 340
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 ELLRKKRTT 10
E+LRK++ T
Sbjct: 1681 EMLRKRKLT 1689
>sp|VL2_HPV65|MINOR capsid protein L2|Human papillomavirus 65
Query: 1 PELLRKKR 8
P L RKKR
Sbjct: 505 PSLYRKKR 512
>sp|VL2_HPV04|MINOR capsid protein L2|Human papillomavirus 4
Query: 1 PELLRKKR 8
P L RKKR
Sbjct: 508 PSLYRKKR 515
43|Sequence|211|220|KKRTTSAEKN
>sp|VP12_CTFVL|UNCHARACTERIZED protein VP12|Colorado tick fever virus (strain
Query: 2 KRTTSAEK 9
+RT SAEK
Sbjct: 84 RRTASAEK 91
>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P
Query: 3 RTTSAEK 9
+TT+AEK
Sbjct: 138 KTTAAEK 144
44|Sequence|216|225|SAEKNTCQLY
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 4 KNTCQLY 10
KNT Q+Y
Sbjct: 195 KNTSQIY 201
>sp|E434_ADE40|EARLY E4 34 kDa protein|Human adenovirus F serotype 40
Query: 3 EKNTCQLY 10
EK+ C++Y
Sbjct: 80 EKHVCKIY 87
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 EKNTCQLY 10
+ TC+LY
Sbjct: 1357 QATTCELY 1364
>sp|SPIKE_ADE07|FIBER protein|Human adenovirus B serotype 7
Query: 1 SAEKNTCQL 9
S+E N C+L
Sbjct: 168 SSESNDCKL 176
>sp|SPIKE_ADE1P|FIBER protein|Human adenovirus B serotype 11
Query: 1 SAEKNTCQL 9
S+E N C+L
Sbjct: 150 SSESNDCKL 158
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 6 TCQLY 10
TC+LY
Sbjct: 1360 TCELY 1364
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 6 TCQLY 10
TC+LY
Sbjct: 1345 TCELY 1349
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 6 TCQLY 10
TC+LY
Sbjct: 1345 TCELY 1349
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 6 TCQLY 10
TC+LY
Sbjct: 1345 TCELY 1349
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 6 TCQLY 10
TC+LY
Sbjct: 1359 TCELY 1363
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 6 TCQLY 10
TC+LY
Sbjct: 1345 TCELY 1349
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 6 TCQLY 10
TC+LY
Sbjct: 1345 TCELY 1349
>sp|SPIKE_ADE1A|FIBER protein|Human adenovirus B serotype 11
Query: 1 SAEKNTCQL 9
S+E N C+L
Sbjct: 150 SSESNDCKL 158
45|Sequence|221|230|TCQLYIQTDH
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 CQLYIQTDH 10
CQLYI DH
Sbjct: 278 CQLYIAGDH 286
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 2 CQLYIQTDH 10
CQLYI D+
Sbjct: 277 CQLYIAGDN 285
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 2 CQLYIQTDH 10
CQLYI D
Sbjct: 277 CQLYIAGDQ 285
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 2 CQLYIQTDH 10
CQLYI D
Sbjct: 277 CQLYIAGDQ 285
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 2 CQLYIQTDH 10
CQLYI D
Sbjct: 277 CQLYIAGDQ 285
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 2 CQLYIQTDH 10
CQLYI D
Sbjct: 277 CQLYIAGDQ 285
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 2 CQLYIQTDH 10
CQLYI D
Sbjct: 277 CQLYIAGDQ 285
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 CQLYIQTDH 10
CQLYI D
Sbjct: 277 CQLYIAGDQ 285
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 2 CQLYIQTDH 10
CQLYI D
Sbjct: 277 CQLYIAGDQ 285
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 2 CQLYIQTDH 10
CQLYI D
Sbjct: 277 CQLYIAGDQ 285
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 2 CQLYIQTDH 10
CQLYI D
Sbjct: 278 CQLYIAGDQ 286
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 2 CQLYIQTDH 10
CQLYI D
Sbjct: 277 CQLYIAGDQ 285
>sp|DNB2_ADE04|DNA-BINDING protein|Human adenovirus E serotype 4
Query: 2 CQLYIQTDH 10
C LYI +H
Sbjct: 198 CHLYINEEH 206
>sp|PG165_VACCC|PROTEIN OPG165|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CQLYIQTDH 10
C+ YI T+H
Sbjct: 21 CRYYIDTEH 29
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 3 QLYIQTDH 10
QLYI T H
Sbjct: 1791 QLYITTSH 1798
>sp|YEC4_EBVB9|UNCHARACTERIZED protein EC-RF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 CQLYIQT 8
C+L++QT
Sbjct: 255 CKLHVQT 261
>sp|E411_ADE05|PROBABLE early E4 11 kDa|Human adenovirus C serotype 5
Query: 2 CQLYIQTDH 10
C L ++ DH
Sbjct: 86 CSLAVEFDH 94
>sp|E4RF3_ADE02|EARLY 4 ORF3 protein|Human adenovirus C serotype 2
Query: 2 CQLYIQTDH 10
C L ++ DH
Sbjct: 86 CSLAVEFDH 94
>sp|UL23_HCMVM|TEGUMENT protein UL23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 LYIQTDH 10
+Y+ TDH
Sbjct: 101 MYLWTDH 107
>sp|UL23_HCMVA|TEGUMENT protein UL23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 LYIQTDH 10
+Y+ TDH
Sbjct: 101 MYLWTDH 107
>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)
Query: 1 TCQLYIQ 7
TC++Y++
Sbjct: 522 TCRIYVE 528
46|Sequence|226|235|IQTDHLFFKY
>sp|M2_I80A2|MATRIX protein 2|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 4 DHLFFK 9
DHLFFK
Sbjct: 44 DHLFFK 49
>sp|M2_I60A0|MATRIX protein 2|Influenza A virus (strain A/Ann
Query: 4 DHLFFK 9
DHLFFK
Sbjct: 44 DHLFFK 49
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 QTDHLFFK 9
+TDHLFF
Sbjct: 1964 ETDHLFFN 1971
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 QTDHLFF 8
+TD+LFF
Sbjct: 1964 ETDYLFF 1970
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 QTDHLFFK 9
+TD+LFF
Sbjct: 1964 ETDYLFFN 1971
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 QTDHLFFK 9
+TD+LFF
Sbjct: 1964 ETDYLFFN 1971
>sp|VL1_HPV41|MAJOR capsid protein L1|Human papillomavirus type 41
Query: 4 DHLFF 8
DH+FF
Sbjct: 271 DHMFF 275
>sp|VL1_HPV50|MAJOR capsid protein L1|Human papillomavirus type 50
Query: 4 DHLFF 8
DH+FF
Sbjct: 243 DHVFF 247
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 QTDHLFFK 9
+TD+LFF
Sbjct: 1964 KTDYLFFN 1971
>sp|UL32_HHV6Z|PACKAGING protein UL32 homolog|Human herpesvirus 6B (strain Z29)
Query: 2 QTDHLFFKY 10
+ D+LF KY
Sbjct: 296 KQDYLFLKY 304
>sp|UL32_HHV6U|PACKAGING protein UL32|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 DHLFFKY 10
D+LF KY
Sbjct: 298 DYLFLKY 304
47|Sequence|231|240|LFFKYYGTRE
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 2 FFKYYGTR 9
F+K+YG R
Sbjct: 832 FYKHYGVR 839
>sp|UL23_HCMVM|TEGUMENT protein UL23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 YYGTR 9
YYGTR
Sbjct: 258 YYGTR 262
>sp|UL23_HCMVA|TEGUMENT protein UL23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 YYGTR 9
YYGTR
Sbjct: 258 YYGTR 262
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 LFFKYYG 7
+FFKY G
Sbjct: 1779 IFFKYIG 1785
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 1 LFFKYYGT 8
L FK YGT
Sbjct: 1826 LIFKSYGT 1833
>sp|TRX2_EBVB9|TRIPLEX capsid protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 FFKYYGT 8
FF+++GT
Sbjct: 100 FFQWHGT 106
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 FFKYYGTR 9
+FKY+G +
Sbjct: 4709 YFKYWGMK 4716
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 FFKYYGTR 9
+FKY+G +
Sbjct: 4739 YFKYWGMK 4746
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 2 FFKYYG 7
F+K+YG
Sbjct: 802 FYKHYG 807
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 FFKYYGTR 9
+FKY+G +
Sbjct: 4689 YFKYWGMK 4696
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 2 FFKYYG 7
F+K+YG
Sbjct: 794 FYKHYG 799
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 2 FFKYYG 7
F+K+YG
Sbjct: 793 FYKHYG 798
>sp|VP4_ROTGA|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 2 FFKYYGT 8
+FK YGT
Sbjct: 238 YFKAYGT 244
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 FFKYYG 7
+FKY+G
Sbjct: 4349 YFKYWG 4354
>sp|CAPSD_HASV3|CAPSID polyprotein VP90|Human astrovirus-3 (HAstV-3)
Query: 2 FFKYYGT 8
F++ YGT
Sbjct: 558 FYRSYGT 564
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 LFFKYYGT 8
L FK YG+
Sbjct: 1827 LIFKSYGS 1834
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 1 LFFKY 5
LFFKY
Sbjct: 569 LFFKY 573
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 1 LFFKY 5
LFFKY
Sbjct: 569 LFFKY 573
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 4 KYYGTRE 10
K++GTR+
Sbjct: 1529 KWFGTRK 1535
48|Sequence|236|245|YGTREAVIAQ
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 YGTREAVI 8
Y TREAV+
Sbjct: 1231 YTTREAVV 1238
>sp|VL2_HPV42|MINOR capsid protein L2|Human papillomavirus 42
Query: 2 GTREAVIAQ 10
GTR VIA+
Sbjct: 75 GTRPPVIAE 83
>sp|VE2_HPV03|REGULATORY protein E2|Human papillomavirus 3
Query: 1 YGTREAVIA 9
YG REA ++
Sbjct: 356 YGQREAFLS 364
>sp|VIRF1_HHV8P|VIRF-1 herpesvirus 8 type P
Query: 3 TREAVIA 9
TR+AV+A
Sbjct: 62 TRQAVVA 68
>sp|VL2_HPV32|MINOR capsid protein L2|Human papillomavirus type 32
Query: 2 GTREAVIAQ 10
GTR V+A+
Sbjct: 75 GTRPPVVAE 83
>sp|VIRF4_HHV8P|VIRAL IRF4-like protein|Human herpesvirus 8 type P
Query: 2 GTREAVI 8
GTR AV+
Sbjct: 87 GTRRAVV 93
49|Sequence|241|250|AVIAQISSHV
>sp|MCES_VACCA|MRNA-CAPPING enzyme regulatory subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 1 AVIAQISSH 9
AV+A +S+H
Sbjct: 98 AVVADLSAH 106
50|Sequence|246|255|ISSHVKAIDT
>sp|UL25_HHV6G|VIRION-PACKAGING protein UL25 homolog|Human herpesvirus 6A (strain GS)
Query: 1 ISSHVKAID 9
++SH+KAI+
Sbjct: 77 LNSHLKAIE 85
>sp|CVC2_HHV6Z|CAPSID vertex component 2|Human herpesvirus 6B (strain Z29)
Query: 1 ISSHVKAID 9
++SH+KAI+
Sbjct: 77 LNSHLKAIE 85
>sp|CVC2_HHV6U|CAPSID vertex component 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 ISSHVKAID 9
++SH+KAI+
Sbjct: 77 LNSHLKAIE 85
>sp|OBP_HHV6U|REPLICATION origin-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 SSHVKAID 9
SSHV A+D
Sbjct: 167 SSHVIAMD 174
>sp|OBP_HHV6Z|REPLICATION origin-binding protein|Human herpesvirus 6B (strain Z29)
Query: 2 SSHVKAID 9
SSHV A+D
Sbjct: 167 SSHVIAMD 174
>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39
Query: 3 SHVKAIDT 10
+H++++DT
Sbjct: 259 THIQSLDT 266
>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 ISSHVKAIDT 10
+ SHV ID+
Sbjct: 669 LPSHVSTIDS 678
51|Sequence|251|260|KAIDTIYQTT
>sp|UL38_HHV6H|APOPTOSIS inhibitor U19|Human herpesvirus 6B (HHV-6 variant
Query: 3 IDTIYQTT 10
ID++Y TT
Sbjct: 321 IDSVYDTT 328
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 KAIDTIYQTT 10
K DT YQ T
Sbjct: 1863 KTFDTEYQKT 1872
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 KAIDTIYQTT 10
K DT YQ T
Sbjct: 1864 KTFDTEYQKT 1873
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 KAIDTIYQTT 10
K DT YQ T
Sbjct: 1864 KTFDTEYQKT 1873
>sp|UL38_HHV6U|APOPTOSIS inhibitor U19|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 IDTIYQTT 10
ID++Y TT
Sbjct: 321 IDSVYDTT 328
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 KAIDTIYQTT 10
K DT YQ T
Sbjct: 1862 KTFDTEYQKT 1871
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 KAIDTIYQTT 10
K DT YQ T
Sbjct: 1862 KTFDTEYQKT 1871
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 KAIDTIYQTT 10
K DT YQ T
Sbjct: 1862 KTFDTEYQKT 1871
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 KAIDTIYQTT 10
K DT YQ T
Sbjct: 1862 KTFDTEYQKT 1871
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 KAIDTIYQTT 10
K DT YQ T
Sbjct: 1862 KTFDTEYQKT 1871
52|Sequence|256|265|IYQTTDFSGI
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 IYQTTDFSGI 10
IY T+D G+
Sbjct: 1906 IYSTSDLRGL 1915
>sp|CAPSD_HASV8|CAPSID polyprotein VP90|Human astrovirus-8 (HAstV-8)
Query: 2 YQTTDFSG 9
YQ T F+G
Sbjct: 235 YQNTQFTG 242
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 2 YQTTDFSG 9
YQ T F+G
Sbjct: 235 YQNTQFTG 242
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 2 YQTTDFSGI 10
Y TTDF +
Sbjct: 1716 YTTTDFCSL 1724
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 2 YQTTDFSGI 10
Y TTDF +
Sbjct: 1716 YTTTDFCSL 1724
53|Sequence|261|270|DFSGIRNISF
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 DFSGIRNISF 10
D SG++ +SF
Sbjct: 423 DLSGVKTVSF 432
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 DFSGIRNISF 10
+F+G+RNI+
Sbjct: 328 EFNGLRNITL 337
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 DFSGIRNISF 10
+F+G+RNI+
Sbjct: 328 EFNGLRNITL 337
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 DFSGIRNIS 9
+F+G+RNI+
Sbjct: 327 EFNGLRNIT 335
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 DFSGIRNIS 9
+F+G+RNI+
Sbjct: 327 EFNGLRNIT 335
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 DFSGIRNIS 9
+F+G+RNI+
Sbjct: 327 EFNGLRNIT 335
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 DFSGIRNIS 9
+F+G+RNI+
Sbjct: 328 EFNGLRNIT 336
>sp|E1BS_ADE05|E1B protein, small T-antigen|Human adenovirus C serotype 5
Query: 1 DFSGIRNI 8
DFS +RN+
Sbjct: 9 DFSAVRNL 16
>sp|E1BS_ADE02|E1B protein, small T-antigen|Human adenovirus C serotype 2
Query: 1 DFSGIRNI 8
DFS +RN+
Sbjct: 9 DFSAVRNL 16
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 DFSGIRNISF 10
DF GI IS+
Sbjct: 1113 DFGGIATISY 1122
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 DFSGIRN 7
DFSGIR+
Sbjct: 1520 DFSGIRD 1526
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 DFSGIRN 7
DFSGIR+
Sbjct: 1520 DFSGIRD 1526
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 DFSGIRNIS 9
+F+G+RN++
Sbjct: 327 EFNGLRNVT 335
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 DFSGIRNIS 9
+F+G+RN++
Sbjct: 327 EFNGLRNVT 335
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 1 DFSGIRNISF 10
DF G+ +IS+
Sbjct: 1111 DFGGVASISY 1120
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 2 FSGIRNI 8
FSG+RN+
Sbjct: 708 FSGLRNL 714
>sp|FUS_HRSVR|FUSION glycoprotein F0|Human respiratory syncytial virus A
Query: 2 FSGIRNISF 10
SGI NI+F
Sbjct: 564 LSGINNIAF 572
>sp|FUS_HRSVA|FUSION glycoprotein F0|Human respiratory syncytial virus A
Query: 2 FSGIRNISF 10
SGI NI+F
Sbjct: 564 LSGINNIAF 572
>sp|FUS_HRSV|FUSION glycoprotein F0|Human respiratory syncytial virus
Query: 2 FSGIRNISF 10
SGI NI+F
Sbjct: 564 LSGINNIAF 572
>sp|FUS_HRSVB|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 2 FSGIRNISF 10
SGI NI+F
Sbjct: 564 LSGINNIAF 572
>sp|FUS_HRSV1|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 2 FSGIRNISF 10
SGI NI+F
Sbjct: 564 LSGINNIAF 572
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 DFSGIRNIS 9
+FSGIR+ S
Sbjct: 319 EFSGIRSKS 327
>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957
Query: 1 DFSGIRNIS 9
DF RNIS
Sbjct: 380 DFDDCRNIS 388
>sp|VL2_HPV60|MINOR capsid protein L2|Human papillomavirus type 60
Query: 1 DFSGIRNIS 9
DFS + NI+
Sbjct: 398 DFSAVDNIT 406
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 FSGIRNI 8
F+G+RN+
Sbjct: 709 FAGLRNL 715
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 2 FSGIRN 7
F GIRN
Sbjct: 904 FEGIRN 909
54|Sequence|266|275|RNISFMVKRI
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 SFMVKRI 10
++MVKRI
Sbjct: 130 NYMVKRI 136
>sp|HEMA_I85A4|HEMAGGLUTININ A virus (strain A/Swine/Netherlands/12/1985
Query: 1 RNISFMVKR 9
RN+ ++VKR
Sbjct: 163 RNLLWIVKR 171
>sp|A18_YMTV5|TRANSCRIPT termination protein A18|Yaba monkey tumor virus (strain
Query: 1 RNISFMVKRI 10
+NIS +VK+I
Sbjct: 357 KNISDIVKKI 366
>sp|A18_YLDV|TRANSCRIPT termination protein A18|Yaba-like disease virus (YLDV)
Query: 1 RNISFMVKRI 10
+NIS +VK+I
Sbjct: 358 KNISDIVKKI 367
55|Sequence|271|280|MVKRIRINTT
>sp|VIF_HV1VI|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 VKRIRINT 9
V R+RINT
Sbjct: 13 VDRMRINT 20
>sp|VIF_HV1ND|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 VKRIRINT 9
V R+RINT
Sbjct: 13 VDRMRINT 20
>sp|VIF_HV193|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 VKRIRINT 9
V R+RINT
Sbjct: 13 VDRMRINT 20
>sp|VIF_HV197|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 VKRIRINT 9
V R+RINT
Sbjct: 13 VDRMRINT 20
>sp|MATRX_PI4HA|MATRIX protein|Human parainfluenza 4a virus (strain
Query: 1 MVKRIRINT 9
+VK+IRI T
Sbjct: 38 LVKQIRIRT 46
>sp|MATRX_PI4HB|MATRIX protein|Human parainfluenza 4b virus (strain
Query: 1 MVKRIRINT 9
+VK+IRI T
Sbjct: 38 LVKQIRIRT 46
>sp|VIF_HV196|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 VKRIRINT 9
V R+RINT
Sbjct: 13 VDRMRINT 20
>sp|VIF_HV1N5|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 VKRIRINT 9
V R+RINT
Sbjct: 13 VDRMRINT 20
>sp|VIF_HV1S2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 VKRIRINT 9
V R+RINT
Sbjct: 13 VDRMRINT 20
>sp|VIF_HV190|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 VKRIRINT 9
V R+RINT
Sbjct: 13 VDRMRINT 20
>sp|VIF_HV1S9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 VKRIRINT 9
V R+RINT
Sbjct: 13 VDRMRINT 20
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 2 VKRIRINTT 10
V R+R+N T
Sbjct: 273 VARLRMNNT 281
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 2 VKRIRINTT 10
V R+R+N T
Sbjct: 1604 VARLRMNNT 1612
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 2 VKRIRINTT 10
V R+R+N T
Sbjct: 1605 VARLRMNNT 1613
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 2 VKRIRINTT 10
V R+R+N T
Sbjct: 1605 VARLRMNNT 1613
56|Sequence|276|285|RINTTADEKD
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 RINTTADEKD 10
+IN TA EKD
Sbjct: 361 KINFTAPEKD 370
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 INTTADEKD 10
IN T DE++
Sbjct: 1793 INVTCDERE 1801
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 INTTADEKD 10
IN T DE++
Sbjct: 1794 INVTCDERE 1802
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 INTTADEKD 10
IN T DE++
Sbjct: 1793 INVTCDERE 1801
57|Sequence|281|290|ADEKDPTNPF
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 ADEKDPTNP 9
ADE+ PT P
Sbjct: 869 ADEEAPTTP 877
>sp|MATRX_PIV5|MATRIX protein|Parainfluenza virus 5 (strain W3)
Query: 5 DPTNP 9
DPTNP
Sbjct: 9 DPTNP 13
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 DEKDPTNPF 10
+E PTNP+
Sbjct: 660 EEAPPTNPY 668
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 DEKDPTNPF 10
+E PTNP+
Sbjct: 660 EEAPPTNPY 668
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 DEKDPTNPF 10
+E PTNP+
Sbjct: 657 EEAPPTNPY 665
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 DEKDPTNPF 10
+E PTNP+
Sbjct: 658 EEAPPTNPY 666
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 DEKDPTNPF 10
+E PTNP+
Sbjct: 659 EEAPPTNPY 667
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 DEKDPTNPF 10
+E PTNP+
Sbjct: 659 EEAPPTNPY 667
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 DEKDPTNPF 10
+E PTNP+
Sbjct: 659 EEAPPTNPY 667
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 DEKDPTNPF 10
+E PTNP+
Sbjct: 659 EEAPPTNPY 667
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 DEKDPTNPF 10
+E PTNP+
Sbjct: 659 EEAPPTNPY 667
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 DEKDPTNPF 10
+E PTNP+
Sbjct: 659 EEAPPTNPY 667
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 DEKDPTNPF 10
+E PTNP+
Sbjct: 658 EEAPPTNPY 666
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 DEKDPTNPF 10
+E PTNP+
Sbjct: 657 EEAPPTNPY 665
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 4 KDPTNPF 10
KDP +P+
Sbjct: 2823 KDPEHPY 2829
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 4 KDPTNPF 10
KDP +P+
Sbjct: 2823 KDPEHPY 2829
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 KDPTNPF 10
KDP +P+
Sbjct: 2823 KDPEHPY 2829
>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 5 DPTNP 9
DPTNP
Sbjct: 226 DPTNP 230
>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 DPTNP 9
DPTNP
Sbjct: 226 DPTNP 230
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 2 DEKDPTNPF 10
DEKDP F
Sbjct: 490 DEKDPLELF 498
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 KDPTNPF 10
+DPT P
Sbjct: 2806 RDPTTPL 2812
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 4 KDPTNPF 10
+DPT P
Sbjct: 2806 RDPTTPL 2812
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 2 DEKDPTNPF 10
DEKDP F
Sbjct: 490 DEKDPLELF 498
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 4 KDPTNPF 10
+DPT P
Sbjct: 2806 RDPTTPL 2812
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 4 KDPTNP 9
K+PTNP
Sbjct: 817 KNPTNP 822
>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)
Query: 4 KDPTNP 9
K+PTNP
Sbjct: 818 KNPTNP 823
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 4 KDPTNP 9
K+PTNP
Sbjct: 818 KNPTNP 823
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 4 KDPTNP 9
K+PTNP
Sbjct: 818 KNPTNP 823
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 KDPTNPF 10
+DPT P
Sbjct: 2805 RDPTTPL 2811
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 DEKDPTNPF 10
+EK P NP
Sbjct: 2446 EEKLPINPL 2454
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 KDPTNPF 10
+DPT P
Sbjct: 2805 RDPTTPL 2811
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 KDPTNPF 10
+DPT P
Sbjct: 2805 RDPTTPL 2811
>sp|CAPSD_HEVCT|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 4
Query: 6 PTNPF 10
PTNPF
Sbjct: 56 PTNPF 60
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 KDPTNPF 10
+DPT P
Sbjct: 2805 RDPTTPL 2811
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 6 PTNPF 10
PTNPF
Sbjct: 125 PTNPF 129
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 6 PTNPF 10
PTNPF
Sbjct: 125 PTNPF 129
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 DEKDPTNPF 10
+EK P NP
Sbjct: 2446 EEKLPINPL 2454
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 KDPTNPF 10
+DPT P
Sbjct: 2805 RDPTTPL 2811
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 DEKDPTNPF 10
+EK P NP
Sbjct: 2460 EEKLPINPL 2468
Query: 4 KDPTNP 9
+DPT P
Sbjct: 2828 RDPTTP 2833
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 KDPTNPF 10
+DPT P
Sbjct: 2805 RDPTTPL 2811
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 6 PTNPF 10
PTNPF
Sbjct: 125 PTNPF 129
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 4 KDPTNPF 10
+DPT P
Sbjct: 2811 RDPTTPL 2817
Query: 2 DEKDPTNPF 10
+EK P NP
Sbjct: 2443 EEKLPINPL 2451
>sp|CAPSD_HEVME|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 2
Query: 6 PTNPF 10
PTNPF
Sbjct: 58 PTNPF 62
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 6 PTNPF 10
PTNPF
Sbjct: 125 PTNPF 129
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 4 KDPTNPF 10
+DPT P
Sbjct: 2832 RDPTTPL 2838
Query: 2 DEKDPTNPF 10
+EK P NP
Sbjct: 2464 EEKLPINPL 2472
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 DEKDPTNPF 10
+EK P NP
Sbjct: 2442 EEKLPINPL 2450
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 DEKDPTNPF 10
+EK P NP
Sbjct: 2460 EEKLPINPL 2468
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 DEKDPTNPF 10
+EK P NP
Sbjct: 2460 EEKLPINPL 2468
Query: 4 KDPTNP 9
+DPT P
Sbjct: 2828 RDPTTP 2833
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 DEKDPTNPF 10
+EK P NP
Sbjct: 2445 EEKLPINPL 2453
>sp|CAPSD_HEVBU|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 6 PTNPF 10
PTNPF
Sbjct: 58 PTNPF 62
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 6 PTNPF 10
PTNPF
Sbjct: 125 PTNPF 129
>sp|GO_HHV6Z|130 kDa Glycoprotein O|Human herpesvirus 6B (strain Z29)
Query: 4 KDPTNP 9
K+PTNP
Sbjct: 464 KEPTNP 469
>sp|CAPSD_HEVCH|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 6 PTNPF 10
PTNPF
Sbjct: 58 PTNPF 62
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 4 KDPTNPF 10
+DPT P
Sbjct: 2828 RDPTTPL 2834
Query: 2 DEKDPTNPF 10
+EK P NP
Sbjct: 2460 EEKLPINPL 2468
>sp|CAPSD_HEVPA|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 6 PTNPF 10
PTNPF
Sbjct: 58 PTNPF 62
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 DEKDPTNPF 10
+EK P NP
Sbjct: 2441 EEKLPINPL 2449
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 4 KDPTNP 9
+DPT P
Sbjct: 2828 RDPTTP 2833
>sp|CAPSD_HEVMY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 6 PTNPF 10
PTNPF
Sbjct: 58 PTNPF 62
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 6 PTNPF 10
PTNPF
Sbjct: 125 PTNPF 129
>sp|CAPSD_HEVHY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 6 PTNPF 10
PTNPF
Sbjct: 58 PTNPF 62
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 DEKDPTNPF 10
+EK P NP
Sbjct: 2441 EEKLPINPL 2449
>sp|CAPSD_HEVUS|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 6 PTNPF 10
PTNPF
Sbjct: 58 PTNPF 62
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 6 PTNPF 10
PTNPF
Sbjct: 125 PTNPF 129
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 6 PTNPF 10
PTNPF
Sbjct: 125 PTNPF 129
>sp|CAPSD_HEVMG|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 6 PTNPF 10
PTNPF
Sbjct: 58 PTNPF 62
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 6 PTNPF 10
PTNPF
Sbjct: 125 PTNPF 129
>sp|NSS_HTRV|NON-STRUCTURAL protein NS-S|Heartland virus (HTRV)
Query: 1 ADEKDPTNPF 10
A + DP NP
Sbjct: 238 ARQDDPLNPL 247
>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)
Query: 2 DEKDPTNPF 10
D K TNP
Sbjct: 178 DNKTATNPL 186
>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)
Query: 2 DEKDPTNPF 10
D K TNP
Sbjct: 178 DNKTATNPL 186
>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)
Query: 2 DEKDPTNPF 10
D K TNP
Sbjct: 178 DNKTATNPL 186
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 3 EKDPTNPF 10
+ DP PF
Sbjct: 1231 QSDPARPF 1238
58|Sequence|286|295|PTNPFRFPNI
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 4 PFRFP 8
PFRFP
Sbjct: 990 PFRFP 994
>sp|P100_HHV6Z|LARGE structural phosphoprotein|Human herpesvirus 6B (strain Z29)
Query: 3 NPFRFPN 9
+PFR PN
Sbjct: 742 SPFRLPN 748
>sp|P100_HHV6H|LARGE structural phosphoprotein|Human herpesvirus 6B (HHV-6 variant
Query: 3 NPFRFPN 9
+PFR PN
Sbjct: 742 SPFRLPN 748
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 1 PTNPFRFPN 9
P NPF P+
Sbjct: 378 PYNPFEDPD 386
>sp|BRRF2_EBVG|TEGUMENT protein BRRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PTNPFRFP 8
P N F+FP
Sbjct: 280 PLNTFKFP 287
>sp|GCVK_HHV6Z|PROBABLE ganciclovir kinase|Human herpesvirus 6B (strain Z29)
Query: 3 NPFRFP 8
NP R+P
Sbjct: 451 NPLRYP 456
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 3 NPFRFP 8
NPF FP
Sbjct: 1951 NPFHFP 1956
>sp|BRRF2_EBVA8|TEGUMENT protein BRRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PTNPFRFP 8
P N F+FP
Sbjct: 280 PLNTFKFP 287
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 3 NPFRFP 8
NPF FP
Sbjct: 1951 NPFHFP 1956
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 3 NPFRFP 8
NPF FP
Sbjct: 1951 NPFHFP 1956
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 1 PTNPFRFP 8
P NP FP
Sbjct: 872 PQNPMLFP 879
>sp|ICP34_HHV1F|NEUROVIRULENCE factor ICP34.5|Human herpesvirus 1 (strain F)
Query: 1 PTNPFRFP 8
P+ PFR P
Sbjct: 122 PSRPFRLP 129
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 2 TNPFRFPN 9
+NPF PN
Sbjct: 2651 SNPFNSPN 2658
>sp|BRRF2_EBVB9|TEGUMENT protein BRRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PTNPFRFP 8
P N F+FP
Sbjct: 280 PLNTFQFP 287
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 PFRFPN 9
PFR PN
Sbjct: 761 PFRAPN 766
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 2 TNPFRFPN 9
+NPF PN
Sbjct: 2651 SNPFNSPN 2658
>sp|ICP34_HHV11|NEUROVIRULENCE factor ICP34.5|Human herpesvirus 1 (strain 17)
Query: 1 PTNPFRFP 8
P+ PFR P
Sbjct: 122 PSRPFRLP 129
>sp|ICP34_HHV1D|NEUROVIRULENCE factor ICP34.5|Human herpesvirus 1 (strain CVG-2)
Query: 1 PTNPFRFP 8
P+ PFR P
Sbjct: 123 PSRPFRLP 130
>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39
Query: 5 FRFPN 9
F+FPN
Sbjct: 583 FKFPN 587
>sp|VE2_HPV29|REGULATORY protein E2|Human papillomavirus 29
Query: 3 NPFRFPN 9
NP+R P+
Sbjct: 297 NPYRHPS 303
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 PTNPFRFPN 9
P NP F N
Sbjct: 407 PENPVLFTN 415
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 PTNPFRFPN 9
P NP F N
Sbjct: 407 PENPVLFTN 415
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 PTNPFRFPN 9
P NP F N
Sbjct: 407 PENPVLFTN 415
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 PTNPFRFPN 9
P NP F N
Sbjct: 407 PENPVLFTN 415
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 PTNPFRFPN 9
P NP F N
Sbjct: 407 PENPVLFTN 415
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 PTNPFRFPN 9
P NP F N
Sbjct: 407 PENPVLFTN 415
>sp|P100_HHV6U|LARGE structural phosphoprotein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 NPFRFPN 9
+PFR P+
Sbjct: 754 SPFRLPD 760
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 TNPFRFPNI 10
T PF F N+
Sbjct: 180 TTPFMFKNL 188
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TNPFRFPNI 10
T+ F FP I
Sbjct: 476 TDSFSFPQI 484
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 TNPFRFPNI 10
T PF F N+
Sbjct: 180 TTPFMFKNL 188
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 TNPFRFPNI 10
T PF F N+
Sbjct: 180 TTPFMFKNL 188
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 TNPFRFPNI 10
T PF F N+
Sbjct: 180 TTPFMFKNL 188
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 1 PTNPFR 6
PTNPF+
Sbjct: 125 PTNPFQ 130
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 1 PTNPFR 6
PTNPF+
Sbjct: 125 PTNPFQ 130
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 1 PTNPFR 6
PTNPF+
Sbjct: 125 PTNPFQ 130
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 PTNPFR 6
PTNPF+
Sbjct: 125 PTNPFQ 130
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 1 PTNPFR 6
PTNPF+
Sbjct: 125 PTNPFQ 130
>sp|CAPSD_HEVME|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 2
Query: 1 PTNPF 5
PTNPF
Sbjct: 58 PTNPF 62
>sp|CAPSD_HEVCT|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 4
Query: 1 PTNPF 5
PTNPF
Sbjct: 56 PTNPF 60
>sp|CAPSD_NVN68|CAPSID protein VP1|Norovirus (strain Human/NoV/United
Query: 2 TNPFRFPNI 10
T PF PN+
Sbjct: 228 TRPFTLPNL 236
>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 NPFRFP 8
NPFR P
Sbjct: 658 NPFRMP 663
>sp|ICP34_HHV1N|NEUROVIRULENCE factor ICP34.5|Human herpesvirus 1 (strain MGH-10)
Query: 1 PTNPFRFP 8
P+ PFR P
Sbjct: 116 PSRPFRLP 123
>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)
Query: 3 NPFRFP 8
NPFR P
Sbjct: 657 NPFRMP 662
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 1 PTNPFR 6
PTNPF+
Sbjct: 125 PTNPFQ 130
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 1 PTNPFR 6
PTNPF+
Sbjct: 125 PTNPFQ 130
>sp|VL2_HPV41|MINOR capsid protein L2|Human papillomavirus type 41
Query: 1 PTNPFR 6
PT+PFR
Sbjct: 116 PTDPFR 121
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 1 PTNPFR 6
PTNPF+
Sbjct: 125 PTNPFQ 130
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 1 PTNPFR 6
PTNPF+
Sbjct: 125 PTNPFQ 130
>sp|CAPSD_HEVCH|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 PTNPF 5
PTNPF
Sbjct: 58 PTNPF 62
>sp|CAPSD_HEVBU|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 PTNPF 5
PTNPF
Sbjct: 58 PTNPF 62
>sp|CAPSD_HEVPA|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 PTNPF 5
PTNPF
Sbjct: 58 PTNPF 62
>sp|CAPSD_HEVMG|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 1 PTNPF 5
PTNPF
Sbjct: 58 PTNPF 62
>sp|CAPSD_HEVUS|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 1 PTNPF 5
PTNPF
Sbjct: 58 PTNPF 62
>sp|CAPSD_HEVMY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 PTNPF 5
PTNPF
Sbjct: 58 PTNPF 62
>sp|CAPSD_HEVHY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 PTNPFRFPNI 10
PTNPF PN+
Sbjct: 58 PTNPFA-PNV 66
59|Sequence|291|300|RFPNIGVEKF
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 FPNIGVEKF 10
FP +G+E++
Sbjct: 324 FPGLGLERY 332
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 1 RFPNIGVEKF 10
RFP++G+ +
Sbjct: 641 RFPHVGIGSY 650
>sp|CAP3_ADE12|PRE-HEXON-LINKING protein IIIa|Human adenovirus A serotype 12
Query: 2 FPNIGVEKF 10
FPN G+E
Sbjct: 496 FPNNGIESL 504
>sp|UL32_HHV7J|PACKAGING protein UL32|Human herpesvirus 7 (strain JI)
Query: 3 PNIGVEKF 10
PNI ++KF
Sbjct: 188 PNIRIKKF 195
>sp|CAP3_ADE05|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 5
Query: 2 FPNIGVEKF 10
FPN G+E
Sbjct: 508 FPNNGIESL 516
>sp|CAP3_ADE02|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 2
Query: 2 FPNIGVEKF 10
FPN G+E
Sbjct: 508 FPNNGIESL 516
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 FPNIGVEK 9
FP G+E+
Sbjct: 325 FPGTGIER 332
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 FPNIGVE 8
+PN G+E
Sbjct: 1598 YPNWGIE 1604
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 4 NIGVEKF 10
NIGVE+
Sbjct: 159 NIGVERL 165
>sp|GM_HHV6U|ENVELOPE glycoprotein M|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 FPNIG 6
FPN+G
Sbjct: 37 FPNLG 41
>sp|YVAL_VACCC|UNCHARACTERIZED 9.9 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 RFPNIGVEK 9
RFP G+++
Sbjct: 52 RFPFTGIDR 60
>sp|GM_HHV6Z|ENVELOPE glycoprotein M|Human herpesvirus 6B (strain Z29)
Query: 2 FPNIG 6
FPN+G
Sbjct: 37 FPNLG 41
>sp|GM_EBVG|ENVELOPE glycoprotein M|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 FPNIG 6
FPN+G
Sbjct: 37 FPNLG 41
>sp|GM_EBVB9|ENVELOPE glycoprotein M|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 FPNIG 6
FPN+G
Sbjct: 37 FPNLG 41
>sp|GM_EBVA8|ENVELOPE glycoprotein M|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 FPNIG 6
FPN+G
Sbjct: 37 FPNLG 41
>sp|GM_HHV7J|ENVELOPE glycoprotein M|Human herpesvirus 7 (strain JI)
Query: 2 FPNIG 6
FPN+G
Sbjct: 37 FPNLG 41
60|Sequence|296|305|GVEKFLELNS
>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain
Query: 1 GVEKFLELNS 10
+E FL++NS
Sbjct: 242 SLEDFLDINS 251
>sp|HEMA_HUTV|HEMAGGLUTININ-ESTERASE torovirus (HuTV)
Query: 1 GVEKFLELNS 10
GV+ ++EL +
Sbjct: 112 GVDSYMELKT 121
61|Sequence|301|310|LELNSEQNHD
>sp|YL12_ADE41|UNCHARACTERIZED 8.0 kDa protein in|Human adenovirus F serotype 41
Query: 1 LELNSEQN 8
LELN QN
Sbjct: 26 LELNGNQN 33
62|Sequence|306|315|EQNHDDYCLA
>sp|OX2V_HHV6U|PUTATIVE OX-2 membrane glycoprotein homolog|Human herpesvirus 6A (strain
Query: 2 QNHDDY 7
QNHD+Y
Sbjct: 243 QNHDEY 248
>sp|OX2V_HHV6Z|PUTATIVE OX-2 membrane glycoprotein homolog|Human herpesvirus 6B (strain
Query: 2 QNHDDY 7
QNHD+Y
Sbjct: 244 QNHDEY 249
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 NHDDYC 8
NHD YC
Sbjct: 6164 NHDRYC 6169
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 EQNHDDYC 8
+ NHD YC
Sbjct: 6179 QSNHDLYC 6186
>sp|VU51_HHV7J|G-PROTEIN coupled receptor homolog U51|Human herpesvirus 7 (strain JI)
Query: 5 DDYCL 9
DDYCL
Sbjct: 153 DDYCL 157
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 EQNHDDYC 8
+ NHD +C
Sbjct: 6156 QSNHDQHC 6163
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 NHDDYC 8
NHD YC
Sbjct: 6155 NHDLYC 6160
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 3 NHDDYCLA 10
N DDY +A
Sbjct: 57 NDDDYVIA 64
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 QNHDDYC 8
QNH +C
Sbjct: 5821 QNHHTFC 5827
Query: 3 NHDDYCLA 10
N DDY +A
Sbjct: 57 NDDDYVIA 64
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 EQNHDDYCLA 10
E+ HD CL+
Sbjct: 685 EETHDIPCLS 694
>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P
Query: 4 HDDYC 8
HDD C
Sbjct: 534 HDDVC 538
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 EQNHDDYCLA 10
E+ HD CL+
Sbjct: 685 EETHDIPCLS 694
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 5 DDYC 8
DDYC
Sbjct: 2036 DDYC 2039
>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 NHDDYCLA 10
+H+DY +A
Sbjct: 219 SHEDYLIA 226
>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 3 NHDDYCLA 10
+H+DY +A
Sbjct: 219 SHEDYLIA 226
>sp|RDRP_ROTHW|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 3 NHDDYCLA 10
+H+DY +A
Sbjct: 219 SHEDYLIA 226
>sp|RDRP_ROTWI|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 3 NHDDYCLA 10
+H+DY +A
Sbjct: 219 SHEDYLIA 226
>sp|RDRP_ROTHP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 3 NHDDYCLA 10
+H+DY +A
Sbjct: 219 SHEDYLIA 226
>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 NHDDYCLA 10
+H+DY +A
Sbjct: 219 SHEDYLIA 226
>sp|RDRP_ROTH7|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 3 NHDDYCLA 10
+H+DY +A
Sbjct: 219 SHEDYLIA 226
>sp|RDRP_ROTHT|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 3 NHDDYCLA 10
+H+DY +A
Sbjct: 219 SHEDYLIA 226
>sp|RDRP_ROTHK|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 NHDDYCLA 10
+H+DY +A
Sbjct: 219 SHEDYLIA 226
>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate
Query: 3 NHDDYCLA 10
+H+DY +A
Sbjct: 219 SHEDYLIA 226
>sp|RDRP_ROTHD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 3 NHDDYCLA 10
+H+DY +A
Sbjct: 219 SHEDYLIA 226
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 6 DYCLA 10
DYCL+
Sbjct: 336 DYCLS 340
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 6 DYCLA 10
DYCL+
Sbjct: 336 DYCLS 340
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 6 DYCLA 10
DYCL+
Sbjct: 336 DYCLS 340
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 6 DYCLA 10
DYCL+
Sbjct: 335 DYCLS 339
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 6 DYCLA 10
DYCL+
Sbjct: 335 DYCLS 339
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 6 DYCLA 10
DYCL+
Sbjct: 336 DYCLS 340
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 6 DYCLA 10
DYCL+
Sbjct: 336 DYCLS 340
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 6 DYCLA 10
DYCL+
Sbjct: 336 DYCLS 340
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 6 DYCLA 10
DYCL+
Sbjct: 336 DYCLS 340
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 6 DYCLA 10
DYCL+
Sbjct: 336 DYCLS 340
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 6 DYCLA 10
DYCL+
Sbjct: 335 DYCLS 339
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 6 DYCLA 10
DYCL+
Sbjct: 325 DYCLS 329
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 6 DYCLA 10
DYCL+
Sbjct: 325 DYCLS 329
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 6 DYCLA 10
DYCL+
Sbjct: 325 DYCLS 329
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 6 DYCLA 10
DYCL+
Sbjct: 325 DYCLS 329
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 6 DYCLA 10
DYCL+
Sbjct: 325 DYCLS 329
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 6 DYCLA 10
DYCL+
Sbjct: 325 DYCLS 329
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 6 DYCLA 10
DYCL+
Sbjct: 336 DYCLS 340
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 6 DYCLA 10
DYCL+
Sbjct: 336 DYCLS 340
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 6 DYCLA 10
DYCL+
Sbjct: 336 DYCLS 340
>sp|RDRP_ROTHS|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 NHDDYCLA 10
+H+DY +A
Sbjct: 219 SHEDYLIA 226
>sp|RDRP_ROTYO|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 NHDDYCLA 10
+H+DY +A
Sbjct: 219 SHEDYLIA 226
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 5 DDYC 8
DDYC
Sbjct: 2036 DDYC 2039
>sp|RDRP_ROTH3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 NHDDYCLA 10
+H+DY +A
Sbjct: 219 SHEDYLIA 226
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 2 QNHDD 6
+NHDD
Sbjct: 1057 RNHDD 1061
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 2 QNHDD 6
+NHDD
Sbjct: 1058 RNHDD 1062
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 2 QNHDD 6
+NHDD
Sbjct: 1059 RNHDD 1063
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 2 QNHDD 6
+NHDD
Sbjct: 1059 RNHDD 1063
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 2 QNHDD 6
+NHDD
Sbjct: 1059 RNHDD 1063
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 QNHDD 6
+NHDD
Sbjct: 1058 RNHDD 1062
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 2 QNHDD 6
+NHDD
Sbjct: 1058 RNHDD 1062
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 QNHDD 6
+NHDD
Sbjct: 1061 RNHDD 1065
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 2 QNHDD 6
+NHDD
Sbjct: 1075 RNHDD 1079
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 2 QNHDD 6
+NHDD
Sbjct: 1067 RNHDD 1071
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 2 QNHDD 6
+NHDD
Sbjct: 1069 RNHDD 1073
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 QNHDD 6
+NHDD
Sbjct: 1067 RNHDD 1071
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 2 QNHDD 6
+NHDD
Sbjct: 1056 RNHDD 1060
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 QNHDD 6
+NHDD
Sbjct: 1057 RNHDD 1061
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 2 QNHDD 6
+NHDD
Sbjct: 1070 RNHDD 1074
>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A
Query: 1 EQNHDDYCL 9
E + +DYCL
Sbjct: 572 EFDPNDYCL 580
>sp|HEPA_HHV6Z|DNA helicase/primase complex-associated protein|Human herpesvirus 6B
Query: 1 EQNHDDYCL 9
E + +DYCL
Sbjct: 572 EFDPNDYCL 580
>sp|US31_HCMVM|UNCHARACTERIZED protein US31|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 NHDDYCL 9
+HD +CL
Sbjct: 63 SHDRWCL 69
>sp|US31_HCMVA|UNCHARACTERIZED protein HHRF6|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 NHDDYCL 9
+HD +CL
Sbjct: 63 SHDRWCL 69
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 2 QNHDD 6
+NHDD
Sbjct: 1068 RNHDD 1072
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 2 QNHDD 6
+NHDD
Sbjct: 1057 RNHDD 1061
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 2 QNHDD 6
+NHDD
Sbjct: 1065 RNHDD 1069
63|Sequence|311|320|DYCLAYVFTD
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 DYCLAYVFTD 10
D C+ V+TD
Sbjct: 471 DGCITGVYTD 480
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 DYCLAYVFTD 10
D C+ V+TD
Sbjct: 471 DGCITGVYTD 480
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 DYCLAYVFTD 10
D C+ V+TD
Sbjct: 471 DGCITGVYTD 480
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 DYCLAYVFTD 10
D C+ V+TD
Sbjct: 471 DGCITGVYTD 480
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 DYCLAYVFTD 10
D C+ V+TD
Sbjct: 471 DGCITGVYTD 480
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 DYCLAYVFTD 10
D C+ V+TD
Sbjct: 471 DGCITGVYTD 480
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 DYCLAYVFTD 10
D C+ V+TD
Sbjct: 471 DGCITGVYTD 480
>sp|IR10_HCMVA|PROTEIN IRL10|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DYCLAY 6
D CLAY
Sbjct: 115 DQCLAY 120
>sp|UL79_HHV8P|PROTEIN UL79 homolog|Human herpesvirus 8 type P
Query: 2 YCLAYVFTD 10
YCLA+ +D
Sbjct: 165 YCLAFWGSD 173
>sp|IR10_HCMVM|PROTEIN IRL10|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DYCLAY 6
D CLAY
Sbjct: 114 DQCLAY 119
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 3 CLAYVFT 9
C+A VFT
Sbjct: 161 CMASVFT 167
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 2 YCLAYVFTD 10
+CL Y D
Sbjct: 606 FCLTYAAVD 614
>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain
Query: 3 CLAYVFTD 10
C++ V+TD
Sbjct: 473 CISGVYTD 480
64|Sequence|316|325|YVFTDRDFDD
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 1 YVFTDRDFDD 10
YVF DR+F D
Sbjct: 517 YVFYDRNFGD 526
>sp|MTA_HHV8P|POST-TRANSCRIPTIONAL regulator MTA|Human herpesvirus 8 type P
Query: 2 VFTDRD 7
VFTDRD
Sbjct: 217 VFTDRD 222
>sp|NP04_VZVD|NUCLEAR protein UL4 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 YVFTDRDF 8
Y FT RDF
Sbjct: 129 YAFTHRDF 136
>sp|NP04_VZVO|NUCLEAR protein UL4 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 YVFTDRDF 8
Y FT RDF
Sbjct: 129 YAFTHRDF 136
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 2 VFTDRDFDD 10
+FTD++ DD
Sbjct: 701 LFTDKELDD 709
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 2 VFTDRDFDD 10
+FTD++ DD
Sbjct: 701 LFTDKELDD 709
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 4 TDRDF 8
TDRDF
Sbjct: 292 TDRDF 296
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 4 TDRDF 8
TDRDF
Sbjct: 292 TDRDF 296
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 TDRDF 8
TDRDF
Sbjct: 292 TDRDF 296
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 4 TDRDF 8
TDRDF
Sbjct: 292 TDRDF 296
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 4 TDRDF 8
TDRDF
Sbjct: 292 TDRDF 296
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 TDRDF 8
TDRDF
Sbjct: 292 TDRDF 296
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 4 TDRDF 8
TDRDF
Sbjct: 292 TDRDF 296
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 4 TDRDF 8
TDRDF
Sbjct: 292 TDRDF 296
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 4 TDRDF 8
TDRDF
Sbjct: 292 TDRDF 296
>sp|UL28_HCMVA|UNCHARACTERIZED protein UL28|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 YVFTDRDFDD 10
Y F +RD+ D
Sbjct: 194 YSFFERDYVD 203
>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 YVFTDRDFDD 10
Y F +RD+ D
Sbjct: 515 YSFFERDYVD 524
>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 YVFTDRDFDD 10
Y F +RD+ D
Sbjct: 516 YSFFERDYVD 525
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 3 FTDRD 7
FTDRD
Sbjct: 172 FTDRD 176
>sp|UL33_HHV7J|G-PROTEIN coupled receptor homolog U12|Human herpesvirus 7 (strain JI)
Query: 1 YVFTDRDF 8
Y FT DF
Sbjct: 311 YAFTRTDF 318
>sp|DUT_HHV7J|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 7 (strain
Query: 1 YVFTDRDFDD 10
++FT D DD
Sbjct: 38 FLFTVTDVDD 47
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 3 FTDRDF 8
FTD DF
Sbjct: 481 FTDDDF 486
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 VFTDRDFDD 10
VF+D+ +D+
Sbjct: 55 VFSDKFYDE 63
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 VFTDRDFDD 10
VF+D+ +D+
Sbjct: 55 VFSDKFYDE 63
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 VFTDRDFDD 10
VF+D+ +D+
Sbjct: 55 VFSDKFYDE 63
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 2 VFTDRD 7
VFTD D
Sbjct: 763 VFTDND 768
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 VFTDRD 7
VFTD D
Sbjct: 763 VFTDND 768
65|Sequence|321|330|RDFDDGVLGL
>sp|VE2_HPV47|REGULATORY protein E2|Human papillomavirus 47
Query: 1 RDFDDGV 7
RDFDD V
Sbjct: 484 RDFDDAV 490
>sp|VE8E2_HPV47|PROTEIN E8^E2C|Human papillomavirus 47
Query: 1 RDFDDGV 7
RDFDD V
Sbjct: 293 RDFDDAV 299
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 RDFDDGVLGL 10
+DF+DG L +
Sbjct: 1320 KDFNDGALAM 1329
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 RDFDDGVLG 9
RDFD +LG
Sbjct: 957 RDFDPDLLG 965
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 RDFDDGVLG 9
RDF +GV G
Sbjct: 1068 RDFLEGVWG 1076
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 RDFDDGVLG 9
RDF +GV G
Sbjct: 1068 RDFLEGVWG 1076
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 RDFDDGVLG 9
RDF +GV G
Sbjct: 1068 RDFLEGVWG 1076
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 RDFDDGVLG 9
RDF +GV G
Sbjct: 295 RDFIEGVSG 303
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 RDFDDGVLG 9
RDF +GV G
Sbjct: 288 RDFVEGVSG 296
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 RDFDDGVLG 9
RDF +GV G
Sbjct: 288 RDFVEGVSG 296
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 RDFDDGVLG 9
RDF +GV G
Sbjct: 288 RDFVEGVSG 296
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 RDFDDGVLG 9
RDF +GV G
Sbjct: 288 RDFVEGVSG 296
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 RDFDDGVLG 9
RDF +GV G
Sbjct: 288 RDFVEGVSG 296
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RDFDDGVLG 9
RDF +GV G
Sbjct: 189 RDFVEGVSG 197
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RDFDDGVLG 9
RDF +GV G
Sbjct: 9 RDFVEGVSG 17
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RDFDDGVLG 9
RDF +GV G
Sbjct: 289 RDFVEGVSG 297
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RDFDDGVLG 9
RDF +GV G
Sbjct: 289 RDFVEGVSG 297
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RDFDDGVLG 9
RDF +GV G
Sbjct: 289 RDFVEGVSG 297
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RDFDDGVLG 9
RDF +GV G
Sbjct: 289 RDFVEGVSG 297
>sp|POLG_DEN2H|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RDFDDGVLG 9
RDF +GV G
Sbjct: 58 RDFVEGVSG 66
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RDFDDGVLG 9
RDF +GV G
Sbjct: 289 RDFVEGVSG 297
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 RDFDDGVLG 9
RDF +GV G
Sbjct: 289 RDFVEGVSG 297
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RDFDDGVLG 9
RDF +GV G
Sbjct: 289 RDFVEGVSG 297
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RDFDDGVLG 9
RDF +GV G
Sbjct: 289 RDFVEGVSG 297
>sp|POLG_DEN23|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 RDFDDGVLG 9
RDF +GV G
Sbjct: 9 RDFVEGVSG 17
>sp|POLG_DEN22|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 RDFDDGVLG 9
RDF +GV G
Sbjct: 9 RDFVEGVSG 17
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 RDFDDGVLGL 10
RDF +GV G+
Sbjct: 296 RDFVEGVNGV 305
>sp|VLTF1_VAR67|LATE transcription factor 1|Variola virus (isolate
Query: 2 DFDDGVLGL 10
D DD +LG+
Sbjct: 233 DNDDNILGM 241
>sp|VLTF1_VACCC|LATE transcription factor 1|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 DFDDGVLGL 10
D DD +LG+
Sbjct: 233 DNDDNILGM 241
>sp|VLTF1_VACCA|LATE transcription factor 1|Vaccinia virus (strain Ankara) (VACV)
Query: 2 DFDDGVLGL 10
D DD +LG+
Sbjct: 233 DNDDNILGM 241
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 RDFDDGVLG 9
RDF +GV G
Sbjct: 294 RDFIEGVHG 302
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 RDFDDGVLG 9
RDF +GV G
Sbjct: 294 RDFIEGVHG 302
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 RDFDDGVLG 9
RDF +GV G
Sbjct: 294 RDFIEGVHG 302
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 RDFDDGVLG 9
RDF +GV G
Sbjct: 294 RDFIEGVHG 302
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 RDFDDGVLG 9
RDF +GV G
Sbjct: 294 RDFIEGVHG 302
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 RDFDDGVLG 9
RDF +GV G
Sbjct: 294 RDFIEGVHG 302
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 RDFDDGVLG 9
RDF +GV G
Sbjct: 294 RDFIEGVHG 302
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 RDFDDGVLG 9
RDF +GV G
Sbjct: 294 RDFIEGVHG 302
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 1 RDFDDGVLG 9
RDF +GV G
Sbjct: 294 RDFIEGVHG 302
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 RDFDDGVLG 9
RDF +GV G
Sbjct: 294 RDFIEGVHG 302
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 RDFDDGVLG 9
RDF +GV G
Sbjct: 299 RDFLEGVSG 307
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 RDFDDGVLG 9
RDF +GV G
Sbjct: 299 RDFLEGVSG 307
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 RDFDDGVLG 9
RDF +GV G
Sbjct: 302 RDFLEGVSG 310
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 RDFDDGVLG 9
RDF +GV G
Sbjct: 299 RDFLEGVSG 307
>sp|ICP27_HHV6U|MRNA export factor ICP27 homolog|Human herpesvirus 6A (strain
Query: 1 RDFDDG 6
RDFD G
Sbjct: 308 RDFDTG 313
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 RDFDDGVLGL 10
+ F D VLGL
Sbjct: 1734 QQFKDKVLGL 1743
>sp|ETF1_YMTV5|EARLY transcription factor 70 kDa|Yaba monkey tumor virus (strain
Query: 2 DFDDGVLGL 10
DFDD + L
Sbjct: 478 DFDDDITSL 486
>sp|ETF1_MCV1|EARLY transcription factor 70 kDa|Molluscum contagiosum virus subtype 1
Query: 2 DFDDGVLGL 10
DFDD + L
Sbjct: 478 DFDDDITSL 486
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 RDFDDGVLG 9
R+ D GV+G
Sbjct: 953 RECDTGVMG 961
>sp|P100_HHV7J|LARGE structural phosphoprotein|Human herpesvirus 7 (strain JI)
Query: 1 RDFDDGVL 8
+DFD G L
Sbjct: 695 QDFDSGSL 702
>sp|VE7_HPV22|PROTEIN E7|Human papillomavirus 22
Query: 1 RDFDDGVLG 9
RDF +LG
Sbjct: 74 RDFQTSLLG 82
>sp|VCP_VACCC|COMPLEMENT control protein C3|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 RDFDDGVLGL 10
RD D+G L +
Sbjct: 90 RDIDNGQLDI 99
>sp|EBNA1_EBVA8|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 FDDGV 7
FDDGV
Sbjct: 600 FDDGV 604
>sp|EBNA1_EBVB9|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 FDDGV 7
FDDGV
Sbjct: 600 FDDGV 604
>sp|EBNA1_EBVG|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 FDDGV 7
FDDGV
Sbjct: 600 FDDGV 604
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 DFDDGVLG 9
D D GV+G
Sbjct: 956 DCDTGVMG 963
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 DFDDGVLG 9
D D GV+G
Sbjct: 956 DCDTGVMG 963
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 4 DDGVLGL 10
DDG LG+
Sbjct: 588 DDGPLGV 594
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 4 DDGVLGL 10
D GV+GL
Sbjct: 986 DHGVIGL 992
66|Sequence|326|335|GVLGLAWVGA
>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 3 LGLAWV 8
+GLAW+
Sbjct: 527 IGLAWI 532
>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 3 LGLAWV 8
+GLAW+
Sbjct: 527 IGLAWI 532
>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 3 LGLAWV 8
+GLAW+
Sbjct: 527 IGLAWI 532
>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 3 LGLAWV 8
+GLAW+
Sbjct: 527 IGLAWI 532
>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 3 LGLAWV 8
+GLAW+
Sbjct: 527 IGLAWI 532
>sp|GC_HHV1K|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain KOS)
Query: 4 GLAWVGA 10
GL W+GA
Sbjct: 14 GLLWLGA 20
>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 3 LGLAWV 8
+GLAW+
Sbjct: 528 VGLAWI 533
>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 3 LGLAWV 8
+GLAW+
Sbjct: 528 VGLAWI 533
>sp|GJ_HHV2H|ENVELOPE glycoprotein J|Human herpesvirus 2 (strain HG52)
Query: 1 GVLGLAWVGA 10
G+LG A VGA
Sbjct: 13 GILGCAAVGA 22
>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 4 GLAWV 8
GLAW+
Sbjct: 529 GLAWI 533
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GVLGLAWVGA 10
G+LG + +GA
Sbjct: 1094 GILGYSQIGA 1103
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GVLGLAWVGA 10
G+LG + +GA
Sbjct: 1504 GILGYSQIGA 1513
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GVLGLAWVGA 10
G+LG + +GA
Sbjct: 1504 GILGYSQIGA 1513
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GVLGLAWVGA 10
G+LG + +GA
Sbjct: 1504 GILGYSQIGA 1513
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GVLGLAWVGA 10
G+LG + +GA
Sbjct: 1504 GILGYSQIGA 1513
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 GVLGLAWVGA 10
G+LG + +GA
Sbjct: 1504 GILGYSQIGA 1513
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GVLGLAWVGA 10
G+LG + +GA
Sbjct: 1504 GILGYSQIGA 1513
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GVLGLAWV 8
G+L L WV
Sbjct: 756 GLLALIWV 763
>sp|VIF_HV1YF|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 6 AWVGA 10
AWVGA
Sbjct: 152 AWVGA 156
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GVLGLAWVGA 10
G+LG + +GA
Sbjct: 1504 GILGYSQIGA 1513
>sp|GE_HHV2H|ENVELOPE glycoprotein E|Human herpesvirus 2 (strain HG52)
Query: 2 VLGLAWVGA 10
V GLAW+ +
Sbjct: 327 VPGLAWLAS 335
67|Sequence|331|340|AWVGAPSGSS
>sp|VL1_HPV1|MAJOR capsid protein L1|Human papillomavirus type 1 (Human
Query: 2 WVGAPSGS 9
+VG PSGS
Sbjct: 298 YVGTPSGS 305
>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4
Query: 2 WVGAPSGS 9
+VG PSGS
Sbjct: 300 YVGTPSGS 307
>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65
Query: 2 WVGAPSGS 9
++G PSGS
Sbjct: 300 YIGTPSGS 307
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 4 GAPSGSS 10
G PSGSS
Sbjct: 2018 GMPSGSS 2024
>sp|NCAP_SEOUS|NUCLEOPROTEIN virus (strain SR-11) (Sapporo
Query: 2 WVGAP 6
W+GAP
Sbjct: 239 WLGAP 243
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 AWVGAPSGSS 10
A + AP+GSS
Sbjct: 295 APLNAPTGSS 304
>sp|US02_HHV11|PROTEIN US2|Human herpesvirus 1 (strain 17)
Query: 1 AWVGAP 6
AWVG P
Sbjct: 157 AWVGEP 162
>sp|US02_HHV2H|PROTEIN US2|Human herpesvirus 2 (strain HG52)
Query: 1 AWVGAP 6
AWVG P
Sbjct: 157 AWVGEP 162
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 1 AWVGAPSGS 9
AW G SG+
Sbjct: 176 AWGGVTSGN 184
68|Sequence|336|345|PSGSSGGICE
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 PSGSSG 6
PSGSSG
Sbjct: 2020 PSGSSG 2025
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 5 SGGICE 10
+GG+CE
Sbjct: 408 AGGVCE 413
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 5 SGGICE 10
+GG+CE
Sbjct: 408 AGGVCE 413
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 5 SGGICE 10
+GG+CE
Sbjct: 408 AGGVCE 413
>sp|J1S_HCMVA|UNCHARACTERIZED protein J1S|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PSGSSGGICE 10
P+G GG+C
Sbjct: 67 PAGCGGGVCR 76
>sp|J1L_HCMVA|UNCHARACTERIZED protein J1L|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PSGSSGGICE 10
P+G GG+C
Sbjct: 184 PAGCGGGVCR 193
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 PSGSSGGIC 9
P G+ GG C
Sbjct: 6657 PQGNLGGNC 6665
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 PSGSSGGIC 9
P G+ GG C
Sbjct: 6677 PQGNLGGNC 6685
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 PSGSSGGIC 9
P G+ GG C
Sbjct: 6707 PQGNLGGNC 6715
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 PSGSSG 6
PSG+SG
Sbjct: 1612 PSGTSG 1617
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 PSGSSG 6
PSG+SG
Sbjct: 1602 PSGTSG 1607
>sp|VE2_HPV36|REGULATORY protein E2|Human papillomavirus 36
Query: 1 PSGSSGG 7
P GS GG
Sbjct: 202 PPGSPGG 208
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 PSGSSG 6
PSG+SG
Sbjct: 1618 PSGTSG 1623
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 PSGSSG 6
PSG+SG
Sbjct: 1618 PSGTSG 1623
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 PSGSSG 6
PSG+SG
Sbjct: 1618 PSGTSG 1623
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 PSGSSG 6
PSG+SG
Sbjct: 1618 PSGTSG 1623
>sp|UL150_HCMVM|UNCHARACTERIZED protein UL150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PSGSSGGICE 10
P G++GG+ E
Sbjct: 560 PLGAAGGVRE 569
>sp|VE2_HPV05|REGULATORY protein E2|Human papillomavirus 5
Query: 1 PSGSSGG 7
P GS GG
Sbjct: 203 PPGSPGG 209
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 PSGSSG 6
PSG+SG
Sbjct: 1618 PSGTSG 1623
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 PSGSSG 6
PSG+SG
Sbjct: 1618 PSGTSG 1623
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 PSGSSG 6
PSG+SG
Sbjct: 1618 PSGTSG 1623
>sp|VE2_HPV47|REGULATORY protein E2|Human papillomavirus 47
Query: 1 PSGSSGG 7
P GS GG
Sbjct: 203 PPGSPGG 209
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 PSGSSG 6
PSG+SG
Sbjct: 1618 PSGTSG 1623
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 PSGSSG 6
PSG+SG
Sbjct: 1618 PSGTSG 1623
>sp|NPH2_VARV|RNA helicase NPH-II|Variola virus
Query: 1 PSGSSG 6
P GSSG
Sbjct: 391 PDGSSG 396
>sp|NPH2_VAR67|RNA helicase NPH-II|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 PSGSSG 6
P GSSG
Sbjct: 391 PDGSSG 396
>sp|NPH2_VACCT|RNA helicase NPH-II|Vaccinia virus (strain Tian Tan)
Query: 1 PSGSSG 6
P GSSG
Sbjct: 391 PDGSSG 396
>sp|NPH2_VACCC|RNA helicase NPH-II|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PSGSSG 6
P GSSG
Sbjct: 391 PDGSSG 396
>sp|NPH2_VACCA|RNA helicase NPH-II|Vaccinia virus (strain Ankara) (VACV)
Query: 1 PSGSSG 6
P GSSG
Sbjct: 391 PDGSSG 396
>sp|NPH2_MONPV|RNA helicase NPH-II|Monkeypox virus (MPXV)
Query: 1 PSGSSG 6
P GSSG
Sbjct: 391 PDGSSG 396
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 PSGSSG 6
P+GSSG
Sbjct: 1634 PAGSSG 1639
>sp|GLYCO_ISFV|GLYCOPROTEIN virus (ISFV)
Query: 1 PSGSSGGIC 9
PS S G +C
Sbjct: 71 PSNSDGYLC 79
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 PSGSSGGI 8
PS + GGI
Sbjct: 1858 PSSAKGGI 1865
>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976
Query: 2 SGSSGGICE 10
S S+G IC+
Sbjct: 61 SSSTGKICD 69
>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977
Query: 2 SGSSGGICE 10
S S+G IC+
Sbjct: 61 SSSTGKICD 69
>sp|HEMA_I75A0|HEMAGGLUTININ A virus (strain A/Beijing/39/1975
Query: 2 SGSSGGICE 10
S S+G IC+
Sbjct: 61 SSSTGKICD 69
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 PSGSSGGICE 10
P G G+C+
Sbjct: 735 PRGGIEGLCQ 744
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 PSGSSGGICE 10
P G G+C+
Sbjct: 735 PRGGIEGLCQ 744
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 PSGSSGGICE 10
P G G+C+
Sbjct: 741 PRGGIEGLCQ 750
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 PSGSSGGICE 10
P G G+C+
Sbjct: 741 PRGGIEGLCQ 750
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 PSGSSGGICE 10
P G G+C+
Sbjct: 741 PRGGIEGLCQ 750
>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989
Query: 2 SGSSGGICE 10
S S+G IC+
Sbjct: 61 SSSTGRICD 69
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 2 SGSSGGICE 10
S S+G IC+
Sbjct: 61 SSSTGRICD 69
69|Sequence|341|350|GGICEKSKLY
>sp|NSP4_ROTHC|NON-STRUCTURAL glycoprotein 4|Rotavirus C (isolate RVC/Human/United
Query: 3 ICEKSKL 9
ICEKS L
Sbjct: 138 ICEKSGL 144
>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 2 GICEKSK 8
GIC KSK
Sbjct: 486 GICVKSK 492
>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)
Query: 2 GICEKSK 8
GIC KSK
Sbjct: 486 GICVKSK 492
>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann
Query: 2 GICEKSK 8
GIC KSK
Sbjct: 486 GICVKSK 492
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 1 GGICE 5
GG+CE
Sbjct: 409 GGVCE 413
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 1 GGICE 5
GG+CE
Sbjct: 409 GGVCE 413
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 1 GGICE 5
GG+CE
Sbjct: 409 GGVCE 413
>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain
Query: 1 GGICEKSKLY 10
GG+ EKS ++
Sbjct: 319 GGLTEKSVIH 328
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 GICEKSKL 9
G CE+S++
Sbjct: 2964 GTCERSEV 2971
>sp|NEC1_HHV6Z|NUCLEAR egress protein 1|Human herpesvirus 6B (strain Z29)
Query: 5 EKSKLY 10
EK+KLY
Sbjct: 28 EKTKLY 33
>sp|NEC1_HHV6U|NUCLEAR egress protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 EKSKLY 10
EK+KLY
Sbjct: 28 EKTKLY 33
>sp|NEC1_HHV6H|NUCLEAR egress protein 1|Human herpesvirus 6B (HHV-6 variant
Query: 5 EKSKLY 10
EK+KLY
Sbjct: 28 EKTKLY 33
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 GICEKSKL 9
G CE+S++
Sbjct: 2964 GTCERSEV 2971
>sp|PHOSP_PI4HA|PHOSPHOPROTEIN parainfluenza 4a virus (strain
Query: 2 GICEKSK 8
G C+KSK
Sbjct: 366 GDCDKSK 372
70|Sequence|346|355|KSKLYSDGKK
>sp|PG058_VACCA|PROTEIN OPG058|Vaccinia virus (strain Ankara) (VACV)
Query: 1 KSKLYSDG 8
K +LYS+G
Sbjct: 2 KHRLYSEG 9
>sp|PG058_MONPV|PROTEIN OPG058|Monkeypox virus (MPXV)
Query: 1 KSKLYSDG 8
K +LYS+G
Sbjct: 2 KHRLYSEG 9
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 2 SKLYSDG 8
SK+Y DG
Sbjct: 1075 SKVYDDG 1081
>sp|HEMA_I85A3|HEMAGGLUTININ A virus (strain A/Chicken/Victoria/1/1985
Query: 1 KSKLYSDGKK 10
++KLY G K
Sbjct: 200 QTKLYGSGNK 209
>sp|HEMA_I85A6|HEMAGGLUTININ A virus (strain A/Starling/Victoria/5156/1985
Query: 1 KSKLYSDGKK 10
++KLY G K
Sbjct: 200 QTKLYGSGNK 209
>sp|PG058_VACCP|PROTEIN OPG058|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 KSKLYSDG 8
K +LYS+G
Sbjct: 2 KYRLYSEG 9
>sp|NSP1_ROTH7|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 1 KSKLYSDGKK 10
KS+ S GKK
Sbjct: 212 KSRFLSKGKK 221
>sp|PG058_VACCC|PROTEIN OPG058|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 KSKLYSDG 8
K +LYS+G
Sbjct: 2 KYRLYSEG 9
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 1 KSKLYSDGKK 10
++KLY G K
Sbjct: 200 QTKLYGSGNK 209
>sp|UL18_HCMVM|MEMBRANE glycoprotein UL18|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 KSKLYSDGK 9
++K Y DGK
Sbjct: 166 QNKTYIDGK 174
>sp|UL18_HCMVA|GLYCOPROTEIN UL18|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 KSKLYSDGK 9
++K Y DGK
Sbjct: 166 QNKTYIDGK 174
>sp|PG058_VARV|PROTEIN OPG058|Variola virus
Query: 1 KSKLYSDG 8
K K+YS+G
Sbjct: 2 KHKVYSEG 9
>sp|PG058_VAR67|PROTEIN OPG058|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 KSKLYSDG 8
K K+YS+G
Sbjct: 2 KHKVYSEG 9
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 5 YSDGKK 10
Y+DGKK
Sbjct: 310 YTDGKK 315
71|Sequence|351|360|SDGKKKSLNT
>sp|PHOSP_PI4HB|PHOSPHOPROTEIN parainfluenza 4b virus (strain
Query: 2 DGKKKSLN 9
D KK++LN
Sbjct: 122 DAKKRALN 129
>sp|PHOSP_PI4HA|PHOSPHOPROTEIN parainfluenza 4a virus (strain
Query: 2 DGKKKSLN 9
D KK++LN
Sbjct: 122 DAKKRALN 129
72|Sequence|356|365|KSLNTGIITV
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 KSLNTGII 8
KSL TGII
Sbjct: 1246 KSLATGII 1253
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 KSLNTGII 8
KSL TGII
Sbjct: 1246 KSLATGII 1253
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 KSLNTGII 8
KSL TGII
Sbjct: 1246 KSLATGII 1253
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 KSLNTGII 8
KSL TGII
Sbjct: 1246 KSLATGII 1253
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 KSLNTGII 8
KSL TGII
Sbjct: 1246 KSLATGII 1253
Query: 5 TGIITV 10
TGIIT+
Sbjct: 514 TGIITI 519
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 2 SLNTGIITV 10
S+N G++T+
Sbjct: 62 SINAGVLTI 70
>sp|VE2_HPV45|REGULATORY protein E2|Human papillomavirus 45
Query: 4 NTGIITV 10
NTGI+TV
Sbjct: 332 NTGILTV 338
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 SLNTGII 8
SLNTG I
Sbjct: 433 SLNTGFI 439
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 SLNTGII 8
SLNTG I
Sbjct: 432 SLNTGFI 438
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 2 SLNTGII 8
SLNTG I
Sbjct: 432 SLNTGFI 438
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 KSLNTGII 8
+SLN+G+I
Sbjct: 1830 RSLNSGLI 1837
>sp|VE2_HPV70|REGULATORY protein E2|Human papillomavirus type 70
Query: 2 SLNTGIITV 10
S +TGI+TV
Sbjct: 322 SKHTGILTV 330
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 KSLNTGII 8
+S+NTG I
Sbjct: 431 ESINTGFI 438
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 KSLNTGII 8
+S+NTG I
Sbjct: 431 ESINTGFI 438
>sp|VE2_HPV42|REGULATORY protein E2|Human papillomavirus 42
Query: 1 KSLNTGIITV 10
+ TGIIT+
Sbjct: 355 RDTKTGIITI 364
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 KSLNTGIITV 10
K+ N G ITV
Sbjct: 1146 KAANPGAITV 1155
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 KSLNTGIITV 10
K+ N G ITV
Sbjct: 1146 KAANPGAITV 1155
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 1 KSLNTGIITV 10
K+ N G ITV
Sbjct: 1145 KAANPGAITV 1154
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 3 LNTGIIT 9
LN GI+T
Sbjct: 1931 LNPGIVT 1937
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 LNTGIIT 9
LN GI+T
Sbjct: 1931 LNPGIVT 1937
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 LNTGIIT 9
LN GI+T
Sbjct: 1941 LNPGIVT 1947
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 3 LNTGIIT 9
LN GI+T
Sbjct: 1934 LNPGIVT 1940
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 3 LNTGIIT 9
LN GI+T
Sbjct: 1921 LNPGIVT 1927
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 3 LNTGIIT 9
LN GI+T
Sbjct: 1921 LNPGIVT 1927
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 LNTGIIT 9
LN GI+T
Sbjct: 1925 LNPGIVT 1931
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 LNTGIIT 9
LN GI+T
Sbjct: 1920 LNPGIVT 1926
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 LNTGIIT 9
LN GI+T
Sbjct: 1939 LNPGIVT 1945
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 3 LNTGIIT 9
LN GI+T
Sbjct: 1933 LNPGIVT 1939
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 LNTGIIT 9
LN GI+T
Sbjct: 1922 LNPGIVT 1928
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 3 LNTGIIT 9
LN GI+T
Sbjct: 1922 LNPGIVT 1928
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 LNTGIIT 9
LN GI+T
Sbjct: 1923 LNPGIVT 1929
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 SLNTGII 8
SLNTG +
Sbjct: 432 SLNTGFL 438
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 SLNTGII 8
SLNTG +
Sbjct: 432 SLNTGFL 438
>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)
Query: 2 SLNTGII 8
SLNTG +
Sbjct: 432 SLNTGFL 438
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 SLNTGII 8
SLNTG +
Sbjct: 432 SLNTGFL 438
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 SLNTGII 8
SLNTG +
Sbjct: 432 SLNTGFL 438
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 KSLNTGIIT 9
KSL+ G+I+
Sbjct: 6390 KSLDLGVIS 6398
73|Sequence|361|370|GIITVQNYGS
>sp|CAP6_ADE05|PRE-PROTEIN VI|Human adenovirus C serotype 5
Query: 4 TVQNYGS 10
TV+NYGS
Sbjct: 50 TVKNYGS 56
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 2 IITVQNYGS 10
IIT+ +YGS
Sbjct: 1913 IITLNSYGS 1921
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 GIITVQNYG 9
G+I V +YG
Sbjct: 543 GLIKVTSYG 551
>sp|VP7_ROTHQ|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 3 ITVQNYG 9
I+ QNYG
Sbjct: 48 ISAQNYG 54
>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)
Query: 5 VQNYGS 10
++NYGS
Sbjct: 335 IENYGS 340
>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)
Query: 5 VQNYGS 10
++NYGS
Sbjct: 335 IENYGS 340
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 GIITVQNYGS 10
G++ + YGS
Sbjct: 1779 GVLIYKTYGS 1788
74|Sequence|366|375|QNYGSHVPPK
>sp|VP7_ROTHU|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 1 QNYGSHVP 8
QNYG +VP
Sbjct: 51 QNYGINVP 58
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 3 YGSHVPPK 10
+GSH+P K
Sbjct: 1992 FGSHIPVK 1999
>sp|ORF28_HHV8P|PROTEIN ORF28|Human herpesvirus 8 type P
Query: 4 GSHVPP 9
GSH PP
Sbjct: 80 GSHAPP 85
>sp|GC_HHV2H|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain HG52)
Query: 1 QNYGSHVPP 9
+++GSH PP
Sbjct: 424 EHHGSHQPP 432
>sp|GC_HHV2G|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain G)
Query: 1 QNYGSHVPP 9
+++GSH PP
Sbjct: 423 EHHGSHQPP 431
>sp|GC_HHV23|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain 333)
Query: 1 QNYGSHVPP 9
+++GSH PP
Sbjct: 424 EHHGSHQPP 432
>sp|UL139_HCMVM|MEMBRANE glycoprotein UL139|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 GSHVPPK 10
GS+ PP+
Sbjct: 123 GSYTPPQ 129
>sp|PG003_VAR67|ANKYRIN repeat protein OPG003|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 QNYGSH 6
Q YGSH
Sbjct: 310 QGYGSH 315
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 1 QNYGSHVPPK 10
QN G PP+
Sbjct: 40 QNLGYETPPE 49
>sp|VE2_HPV07|REGULATORY protein E2|Human papillomavirus 7
Query: 5 SHVPPK 10
SH PP+
Sbjct: 242 SHAPPR 247
>sp|GC_HHV1K|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain KOS)
Query: 1 QNYGSHVPP 9
+++GSH PP
Sbjct: 455 EHHGSHQPP 463
>sp|GC_HHV11|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain 17)
Query: 1 QNYGSHVPP 9
+++GSH PP
Sbjct: 455 EHHGSHQPP 463
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 2 NYGSHV 7
+YG+HV
Sbjct: 1162 DYGAHV 1167
>sp|NEC2_EBVB9|NUCLEAR egress protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 6 HVPPK 10
HVPP+
Sbjct: 293 HVPPE 297
>sp|NCAP_INBAA|NUCLEOPROTEIN B virus (strain B/Ann
Query: 4 GSHVPPK 10
G HVP K
Sbjct: 418 GFHVPAK 424
>sp|UNG_EBVB9|URACIL-DNA glycosylase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 YGSHVPP 9
YG VPP
Sbjct: 107 YGFPVPP 113
>sp|CVC2_HHV8P|CAPSID vertex component 2|Human herpesvirus 8 type P
Query: 3 YGSHVPP 9
+GS +PP
Sbjct: 342 FGSDIPP 348
>sp|NCAP_INBP9|NUCLEOPROTEIN B virus (strain B/Panama/45/1990)
Query: 4 GSHVPPK 10
G HVP K
Sbjct: 418 GFHVPAK 424
>sp|NCAP_INBAC|NUCLEOPROTEIN B virus (strain B/Ann
Query: 4 GSHVPPK 10
G HVP K
Sbjct: 418 GFHVPAK 424
>sp|NCAP_INBSI|NUCLEOPROTEIN B virus (strain B/Singapore/222/1979)
Query: 4 GSHVPPK 10
G HVP K
Sbjct: 418 GFHVPAK 424
75|Sequence|371|380|HVPPKVSHIT
>sp|PAX_I97A1|PROTEIN PA-X|Influenza A virus (strain A/Hong
Query: 2 VPPKVSHIT 10
+P KVSH+T
Sbjct: 214 LPTKVSHLT 222
>sp|PAX_I97A0|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong
Query: 2 VPPKVSHIT 10
+P KVSH+T
Sbjct: 214 LPTKVSHLT 222
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 HVPPKVSHI 9
+ PP VSH+
Sbjct: 1317 YTPPDVSHV 1325
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 HVPPKVSHI 9
+ PP VSH+
Sbjct: 1317 YTPPDVSHV 1325
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 HVPPKVSHI 9
+ PP VSH+
Sbjct: 1317 YTPPDVSHV 1325
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 HVPPKVSHI 9
+ PP VSH+
Sbjct: 1317 YTPPDVSHV 1325
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 HVPPKVSHI 9
+ PP VSH+
Sbjct: 1317 YTPPDVSHV 1325
>sp|PAX_I96A0|PROTEIN PA-X|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 2 VPPKVSHI 9
+P KVSH+
Sbjct: 214 LPTKVSHL 221
>sp|PAX_I03A2|PROTEIN PA-X|Influenza A virus (strain A/wyoming/03/2003
Query: 2 VPPKVSHIT 10
+P KVSH T
Sbjct: 214 LPTKVSHRT 222
>sp|PAX_I02A1|PROTEIN PA-X|Influenza A virus (strain A/Guinea
Query: 2 VPPKVSHIT 10
+P KVSH T
Sbjct: 214 LPTKVSHRT 222
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PPKVSHIT 10
P K SHIT
Sbjct: 502 PSKGSHIT 509
>sp|PAX_I67A2|PROTEIN PA-X|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 VPPKVSHIT 10
+P KVSH T
Sbjct: 214 LPTKVSHQT 222
>sp|PAX_I18A0|PROTEIN PA-X|Influenza A virus (strain A/Brevig
Query: 2 VPPKVSHIT 10
+P KVSH T
Sbjct: 214 LPTKVSHRT 222
>sp|PAX_I61A1|PROTEIN PA-X|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 VPPKVSHIT 10
+P KVSH T
Sbjct: 214 LPTKVSHQT 222
>sp|PAX_I01A0|PROTEIN PA-X|Influenza A virus (strain A/Silky
Query: 2 VPPKVSHI 9
+P KVSH+
Sbjct: 214 LPTKVSHL 221
>sp|PAX_I78A9|PROTEIN PA-X|Influenza A virus (strain A/Swine/Hong
Query: 2 VPPKVSHIT 10
+P KVSH T
Sbjct: 214 LPTKVSHRT 222
>sp|PAX_I78A3|PROTEIN PA-X|Influenza A virus (strain A/Mallard/New
Query: 2 VPPKVSHIT 10
+P KVSH T
Sbjct: 214 LPTKVSHRT 222
>sp|PAX_I05A1|PROTEIN PA-X|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 2 VPPKVSHIT 10
+P KVSH T
Sbjct: 214 LPTKVSHRT 222
>sp|PAX_I02A4|PROTEIN PA-X|Influenza A virus (strain A/Silky
Query: 2 VPPKVSHIT 10
+P KVSH T
Sbjct: 214 LPTKVSHRT 222
>sp|PAX_I02A2|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong
Query: 2 VPPKVSHIT 10
+P KVSH T
Sbjct: 214 LPTKVSHRT 222
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 3 PPKVSH 8
PP VSH
Sbjct: 1361 PPTVSH 1366
>sp|PAX_I82A4|PROTEIN PA-X|Influenza A virus (strain A/Swine/Hong
Query: 2 VPPKVSHIT 10
+P KVSH T
Sbjct: 214 LPTKVSHRT 222
>sp|PAX_I00A0|PROTEIN PA-X|Influenza A virus (strain A/Duck/Hong
Query: 2 VPPKVSHIT 10
+P KVSH T
Sbjct: 214 LPTKVSHRT 222
>sp|PAX_I02A0|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 2 VPPKVSHIT 10
+P KVSH T
Sbjct: 214 LPTKVSHRT 222
>sp|PAX_I01A3|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong
Query: 2 VPPKVSHIT 10
+P KVSH T
Sbjct: 214 LPTKVSHRT 222
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 VPPKVSH 8
+PP V+H
Sbjct: 1682 LPPDVTH 1688
>sp|PAX_I02A6|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong
Query: 2 VPPKVSHIT 10
+P KVSH T
Sbjct: 214 LPTKVSHRT 222
>sp|PAX_I02A5|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong
Query: 2 VPPKVSHIT 10
+P KVSH T
Sbjct: 214 LPTKVSHRT 222
>sp|PAX_I09A0|PROTEIN PA-X|Influenza A virus (strain swl
Query: 2 VPPKVSHIT 10
+P KVSH T
Sbjct: 214 LPTKVSHRT 222
>sp|KBZIP_HHV8P|E3 SUMO-protein ligase K-bZIP|Human herpesvirus 8 type P
Query: 1 HVPPKVSHIT 10
H PP+ HI+
Sbjct: 110 HTPPRGPHIS 119
>sp|HEMA_I76A4|HEMAGGLUTININ A virus (strain A/Duck/Alberta/35/1976
Query: 1 HVPPKVS 7
H PP VS
Sbjct: 197 HHPPSVS 203
>sp|PAX_I85A3|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 2 VPPKVSHIT 10
+P KVSH T
Sbjct: 214 LPTKVSHRT 222
>sp|PAX_I80A2|PROTEIN PA-X|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 3 PPKVSHIT 10
P KVSH T
Sbjct: 215 PTKVSHRT 222
>sp|US19_HCMVM|TRANSMEMBRANE protein US19|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PPKVSHIT 10
PP +SH++
Sbjct: 65 PPSLSHLS 72
>sp|PAX_I30A0|PROTEIN PA-X|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 2 VPPKVSH 8
+P KVSH
Sbjct: 214 LPTKVSH 220
>sp|VE2_HPV13|REGULATORY protein E2|Human papillomavirus 13
Query: 2 VPPKVSH 8
+PP ++H
Sbjct: 361 IPPTITH 367
>sp|VP35_EBORR|POLYMERASE cofactor VP35|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 VPPKVSHI 9
VPP + HI
Sbjct: 279 VPPPIIHI 286
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 VPPKVSHI 9
V P+V+HI
Sbjct: 1059 VLPRVAHI 1066
>sp|VE2_HPV6B|REGULATORY protein E2|Human papillomavirus type 6b
Query: 2 VPPKVSH 8
+PP +SH
Sbjct: 352 IPPTISH 358
>sp|US19_HCMVT|TRANSMEMBRANE protein HWLF4|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 PPKVSHIT 10
PP +SH++
Sbjct: 65 PPPLSHLS 72
>sp|US19_HCMVA|TRANSMEMBRANE protein HWLF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PPKVSHIT 10
PP +SH++
Sbjct: 65 PPPLSHLS 72
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 HVPPKV 6
H+PP+V
Sbjct: 191 HLPPEV 196
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 HVPPKV 6
H+PP+V
Sbjct: 191 HLPPEV 196
76|Sequence|376|385|VSHITFAHEV
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 VSHITFAH 8
++H+T AH
Sbjct: 737 LTHVTIAH 744
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain
Query: 3 HITFAHEV 10
H+T+AH +
Sbjct: 41 HMTYAHGI 48
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 3 HITFAHEV 10
H+T+AH +
Sbjct: 41 HMTYAHGI 48
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 1 VSHITF 6
VSHI+F
Sbjct: 184 VSHISF 189
>sp|NEF_HV1MN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 SHITFAH 8
SH+ F H
Sbjct: 189 SHLAFQH 195
>sp|NEF_HV1S3|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 SHITFAH 8
SH+ F H
Sbjct: 186 SHLAFRH 192
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 VSHITFAHE 9
V H FA+E
Sbjct: 1676 VDHSAFAYE 1684
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 VSHITFAHE 9
V H FA+E
Sbjct: 1676 VDHSAFAYE 1684
77|Sequence|381|390|FAHEVGHNFG
>sp|PG042_VACCC|VIRION nicking-joining enzyme|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 FAHEVGHNFG 10
+ EVG NFG
Sbjct: 51 LSDEVGTNFG 60
>sp|PG042_MONPV|VIRION nicking-joining enzyme|Monkeypox virus (MPXV)
Query: 1 FAHEVGHNFG 10
+ EVG NFG
Sbjct: 51 LSDEVGTNFG 60
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 3 HEVGHNFG 10
H + H FG
Sbjct: 70 HTINHTFG 77
>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)
Query: 2 AHEVGH 7
AH++GH
Sbjct: 471 AHDLGH 476
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 4 EVGHNFG 10
E+G NFG
Sbjct: 1916 EMGANFG 1922
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 4 EVGHNFG 10
E+G NFG
Sbjct: 1911 EMGANFG 1917
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 4 EVGHNFG 10
E+G NFG
Sbjct: 1912 EMGANFG 1918
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 4 EVGHNFG 10
E+G NFG
Sbjct: 1910 EMGANFG 1916
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 4 EVGHNFG 10
E+G NFG
Sbjct: 1916 EMGANFG 1922
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 4 EVGHNFG 10
E+G NFG
Sbjct: 1917 EMGANFG 1923
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 4 EVGHNFG 10
E+G NFG
Sbjct: 1917 EMGANFG 1923
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 4 EVGHNFG 10
E+G NFG
Sbjct: 1917 EMGANFG 1923
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 EVGHNFG 10
E+G NFG
Sbjct: 1917 EMGANFG 1923
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 4 EVGHNFG 10
E+G NFG
Sbjct: 1910 EMGANFG 1916
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 FAHEVGHNFG 10
+ E+G++FG
Sbjct: 1004 YVEELGNSFG 1013
>sp|VL2_HPV11|MINOR capsid protein L2|Human papillomavirus 11
Query: 1 FAHEVGHN 8
F HE HN
Sbjct: 262 FTHESIHN 269
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 2 AHEVGHN 8
AH VG+N
Sbjct: 460 AHAVGNN 466
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 2 AHEVGHN 8
AH VG+N
Sbjct: 460 AHAVGNN 466
>sp|VP2_ROTJ1|INNER capsid protein VP2|Rotavirus X (strain
Query: 3 HEVGHNFG 10
H V NFG
Sbjct: 791 HPVPQNFG 798
>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate
Query: 3 HEVGHNFG 10
H V NFG
Sbjct: 791 HPVPQNFG 798
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 3 HEVGHNF 9
H++GH+
Sbjct: 812 HDIGHHL 818
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 HEVGHNF 9
H++GH+
Sbjct: 812 HDIGHHL 818
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 HEVGHNF 9
H++GH+
Sbjct: 812 HDIGHHL 818
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 3 HEVGHNF 9
H VG NF
Sbjct: 1393 HAVGPNF 1399
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 3 HEVGHNF 9
H VG NF
Sbjct: 1399 HAVGPNF 1405
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 3 HEVGHNF 9
H VG NF
Sbjct: 67 HAVGPNF 73
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 3 HEVGHNF 9
H VG NF
Sbjct: 1398 HAVGPNF 1404
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 3 HEVGHNF 9
H VG NF
Sbjct: 1400 HAVGPNF 1406
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 HEVGHNF 9
H VG NF
Sbjct: 1400 HAVGPNF 1406
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 HEVGHNF 9
H VG NF
Sbjct: 1400 HAVGPNF 1406
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 3 HEVGHNF 9
H VG NF
Sbjct: 1401 HAVGPNF 1407
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 3 HEVGHNF 9
H VG NF
Sbjct: 1399 HAVGPNF 1405
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 HEVGHNF 9
H VG NF
Sbjct: 1396 HAVGPNF 1402
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 HEVGHNF 9
H VG NF
Sbjct: 1396 HAVGPNF 1402
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 HEVGHNF 9
H VG NF
Sbjct: 1396 HAVGPNF 1402
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 HEVGHNF 9
H VG NF
Sbjct: 1396 HAVGPNF 1402
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 HEVGHNF 9
H VG NF
Sbjct: 1393 HAVGPNF 1399
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 HEVGHNF 9
H VG NF
Sbjct: 1393 HAVGPNF 1399
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 HEVGHNF 9
H VG NF
Sbjct: 1393 HAVGPNF 1399
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 3 HEVGHNF 9
H VG NF
Sbjct: 1400 HAVGPNF 1406
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 HEVGHNF 9
H VG NF
Sbjct: 1400 HAVGPNF 1406
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 3 HEVGHNF 9
H VG NF
Sbjct: 1398 HAVGPNF 1404
78|Sequence|386|395|GHNFGSPHDS
>sp|U20_HHV6U|GLYCOPROTEIN U20|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 HNFGSPH 8
HNF +PH
Sbjct: 307 HNFPAPH 313
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 GHNFGSPHD 9
GH F SP D
Sbjct: 978 GHGFASPGD 986
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 GHNFGSPHD 9
GH F SP D
Sbjct: 978 GHGFASPGD 986
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 GHNFGSPHD 9
GH F SP D
Sbjct: 979 GHGFASPGD 987
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 GHNFGSPHD 9
GH F SP D
Sbjct: 979 GHGFASPGD 987
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 GHNFGSPHD 9
GH F SP D
Sbjct: 981 GHGFASPGD 989
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 GHNFGSPHD 9
GH F SP D
Sbjct: 981 GHGFASPGD 989
>sp|U20_HHV6Z|GLYCOPROTEIN U20|Human herpesvirus 6B (strain Z29)
Query: 2 HNFGSPH 8
HNF +PH
Sbjct: 307 HNFPAPH 313
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 GHNFGSPHDS 10
G FG P DS
Sbjct: 1716 GFKFGDPADS 1725
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 GHNFGSPHDS 10
G FG P DS
Sbjct: 1716 GFKFGDPADS 1725
>sp|UL125_HCMVA|UNCHARACTERIZED protein UL125|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 HNFGSPHDS 10
HN GSP +S
Sbjct: 57 HNVGSPRES 65
>sp|NCAP_JUNIN|NUCLEOPROTEIN mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 2 HNFGSPHD 9
H F PHD
Sbjct: 403 HCFRKPHD 410
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 GHNFGSPHD 9
G N+G P D
Sbjct: 543 GDNYGGPGD 551
>sp|NCAP_GTOVV|NUCLEOPROTEIN mammarenavirus (isolate Human/Venezuela/NH-95551/1990) (GTOV)
Query: 2 HNFGSPHD 9
H F PHD
Sbjct: 403 HCFRKPHD 410
>sp|NCAP_MACHU|NUCLEOPROTEIN virus (MACV)
Query: 2 HNFGSPHD 9
H F PHD
Sbjct: 403 HCFRKPHD 410
>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)
Query: 4 FGSPH 8
FG+PH
Sbjct: 524 FGTPH 528
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 4 FGSPH 8
FG+PH
Sbjct: 524 FGTPH 528
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 2 HNFGSPHDS 10
H++G P++S
Sbjct: 325 HSYGGPNES 333
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 4 FGSPH 8
FG+PH
Sbjct: 524 FGAPH 528
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 4 FGSPH 8
FG+PH
Sbjct: 524 FGAPH 528
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 4 FGSPH 8
FG+PH
Sbjct: 524 FGAPH 528
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 4 FGSPH 8
FG+PH
Sbjct: 524 FGAPH 528
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 4 FGSPH 8
FG+PH
Sbjct: 524 FGAPH 528
>sp|VP35_EBORR|POLYMERASE cofactor VP35|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 3 NFGSPHDS 10
NFG P+ S
Sbjct: 202 NFGKPYIS 209
>sp|VP35_EBORE|POLYMERASE cofactor VP35|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 3 NFGSPHDS 10
NFG P+ S
Sbjct: 202 NFGKPYIS 209
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 HNFGSPHD 9
H FG P++
Sbjct: 1285 HEFGIPYN 1292
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 HNFGSPHD 9
H FG P++
Sbjct: 1283 HEFGIPYN 1290
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 2 HNFGSPH 8
H FGSP
Sbjct: 261 HPFGSPQ 267
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 1 GHNFGSPHDS 10
GH +P D+
Sbjct: 383 GHRIDNPQDA 392
>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate
Query: 1 GHNFGSPHDS 10
GH +P D+
Sbjct: 383 GHRIDNPQDA 392
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 HNFGSP 7
H FG+P
Sbjct: 74 HTFGNP 79
>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 GHNFGSPHD 9
GH GSP D
Sbjct: 544 GHTDGSPVD 552
>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 GHNFGSPHD 9
GH GSP D
Sbjct: 544 GHTDGSPVD 552
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 4 FGSPH 8
FG PH
Sbjct: 525 FGEPH 529
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 4 FGSPH 8
FG PH
Sbjct: 505 FGEPH 509
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 4 FGSPH 8
FG PH
Sbjct: 525 FGEPH 529
>sp|VIF_HV1Z6|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 HNFGSPH 8
H++ SPH
Sbjct: 42 HHYDSPH 48
>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 3 NFGSPHD 9
N+G+P D
Sbjct: 343 NYGTPAD 349
>sp|VP35_EBOSU|POLYMERASE cofactor VP35|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 NFGSPHDS 10
NFG P+ S
Sbjct: 202 NFGRPYIS 209
>sp|POLG_LIVSB|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/SB
Query: 4 FGSPH 8
FG+PH
Sbjct: 244 FGAPH 248
>sp|POLG_LIV31|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/31/1931)
Query: 4 FGSPH 8
FG+PH
Sbjct: 244 FGAPH 248
>sp|TEGU_HCMV|TEGUMENT protein|Human cytomegalovirus (HHV-5) (Human herpesvirus
Query: 2 HNFGSPH 8
H F SPH
Sbjct: 368 HRFPSPH 374
>sp|POLG_LIVNO|GENOME polyprotein|Louping ill virus (isolate Sheep
Query: 4 FGSPH 8
FG+PH
Sbjct: 244 FGAPH 248
>sp|MATRX_PI4HA|MATRIX protein|Human parainfluenza 4a virus (strain
Query: 1 GHNFGSPH 8
G N GSP
Sbjct: 98 GPNIGSPQ 105
>sp|MATRX_PI4HB|MATRIX protein|Human parainfluenza 4b virus (strain
Query: 1 GHNFGSPH 8
G N GSP
Sbjct: 98 GPNIGSPQ 105
>sp|VIF_HV1Z2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 HNFGSPH 8
H++ SPH
Sbjct: 42 HHYDSPH 48
>sp|VIF_HV1LW|TRUNCATED virion infectivity factor|Human immunodeficiency virus type 1
Query: 2 HNFGSPH 8
H++ SPH
Sbjct: 42 HHYESPH 48
>sp|NCAP_CVH22|NUCLEOPROTEIN coronavirus 229E (HCoV-229E)
Query: 2 HNFGS 6
HNFGS
Sbjct: 272 HNFGS 276
>sp|VIF_HV1Y2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 HNFGSPH 8
H++ SPH
Sbjct: 42 HHYESPH 48
>sp|VIF_HV1EL|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 HNFGSPH 8
H++ SPH
Sbjct: 42 HHYESPH 48
79|Sequence|391|400|SPHDSGTECT
>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22
Query: 3 HDSGTECT 10
HDSG EC+
Sbjct: 118 HDSGLECS 125
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 3 HDSGTECT 10
DSG ECT
Sbjct: 111 QDSGLECT 118
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 SPHDSGTEC 9
+PH GT C
Sbjct: 1716 TPHVPGTSC 1724
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 SPHDSGTEC 9
+PH GT C
Sbjct: 1716 TPHVPGTSC 1724
>sp|PB2S1_I96A0|PB2-S1 A virus (strain A/Goose/Guangdong/1/1996
Query: 2 PHDSGTECT 10
PH S EC+
Sbjct: 497 PHRSRAECS 505
>sp|W_HENDH|PROTEIN W|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 HDSGTECT 10
HD G ECT
Sbjct: 117 HDHGGECT 124
>sp|PHOSP_NIPAV|PHOSPHOPROTEIN virus
Query: 3 HDSGTECT 10
HD G ECT
Sbjct: 117 HDHGGECT 124
>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 HDSGTECT 10
HD G ECT
Sbjct: 117 HDHGGECT 124
>sp|W_NIPAV|PROTEIN W|Nipah virus
Query: 3 HDSGTECT 10
HD G ECT
Sbjct: 117 HDHGGECT 124
>sp|V_NIPAV|NON-STRUCTURAL protein V|Nipah virus
Query: 3 HDSGTECT 10
HD G ECT
Sbjct: 117 HDHGGECT 124
>sp|V_HENDH|NON-STRUCTURAL protein V|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 HDSGTECT 10
HD G ECT
Sbjct: 117 HDHGGECT 124
>sp|VGP3_EBVP3|ENVELOPE glycoprotein GP340|Epstein-Barr virus (strain P3HR-1) (HHV-4)
Query: 1 SPHDSGTE 8
SP D+GTE
Sbjct: 493 SPRDNGTE 500
>sp|GP350_EBVA8|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 SPHDSGTE 8
SP D+GTE
Sbjct: 493 SPRDNGTE 500
>sp|GP350_EBVG|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 SPHDSGTE 8
SP D+GTE
Sbjct: 493 SPRDNGTE 500
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 3 HDSGTECT 10
DSG EC+
Sbjct: 114 QDSGLECS 121
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 3 HDSGTEC 9
H SGT C
Sbjct: 366 HQSGTVC 372
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 3 HDSGTEC 9
H SGT C
Sbjct: 366 HQSGTVC 372
>sp|GP350_EBVB9|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SPHDSGTE 8
SP D+GTE
Sbjct: 493 SPWDNGTE 500
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 3 HDSGTEC 9
H SGT C
Sbjct: 366 HQSGTVC 372
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 2 PHDSG 6
PHD+G
Sbjct: 417 PHDAG 421
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 2 PHDSG 6
PHD+G
Sbjct: 417 PHDAG 421
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 2 PHDSGTE 8
P D GTE
Sbjct: 1109 PTDDGTE 1115
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 2 PHDSG 6
PHD+G
Sbjct: 417 PHDAG 421
>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)
Query: 3 HDSGTEC 9
H SGT C
Sbjct: 366 HQSGTVC 372
>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)
Query: 4 DSGTECT 10
D G ECT
Sbjct: 82 DRGVECT 88
>sp|NSP5_ROTGI|NON-STRUCTURAL protein 5|Rotavirus B (isolate RVB/Rat/United
Query: 1 SPHDSGTECT 10
S H G EC+
Sbjct: 108 SKHTEGLECS 117
>sp|HEPA_HHV8P|DNA helicase/primase complex-associated protein|Human herpesvirus 8
Query: 2 PHDSGTEC 9
P+D TEC
Sbjct: 38 PNDGETEC 45
>sp|SHUT_HHV2H|VIRION host shutoff protein|Human herpesvirus 2 (strain HG52)
Query: 4 DSGTECT 10
D G ECT
Sbjct: 82 DRGVECT 88
>sp|SHUT_HHV2G|VIRION host shutoff protein|Human herpesvirus 2 (strain G)
Query: 4 DSGTECT 10
D G ECT
Sbjct: 82 DRGVECT 88
>sp|CVC2_HHV8P|CAPSID vertex component 2|Human herpesvirus 8 type P
Query: 2 PHDSGT 7
PH+ GT
Sbjct: 317 PHNKGT 322
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 SPHDSGTE 8
S HDSG E
Sbjct: 2372 SQHDSGPE 2379
>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 2 PHDSG 6
PHD G
Sbjct: 325 PHDKG 329
>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 2 PHDSG 6
PHD G
Sbjct: 325 PHDKG 329
>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957
Query: 2 PHDSG 6
PHD G
Sbjct: 325 PHDKG 329
>sp|UL147_HCMVT|PUTATIVE viral CXC chemokine 2|Human cytomegalovirus (strain Towne)
Query: 4 DSGTEC 9
D GT+C
Sbjct: 88 DKGTKC 93
>sp|UL147_HCMVM|PUTATIVE viral CXC chemokine 2|Human cytomegalovirus (strain Merlin)
Query: 4 DSGTEC 9
D GT+C
Sbjct: 88 DKGTKC 93
>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United
Query: 3 HDSGTEC 9
HD+ ++C
Sbjct: 138 HDANSDC 144
>sp|GLYC_JUNIN|PRE-GLYCOPROTEIN polyprotein GP complex|Junin mammarenavirus (JUNV) (Junn
Query: 1 SPHDSGTECT 10
+PHD CT
Sbjct: 84 NPHDLPLLCT 93
80|Sequence|396|405|GTECTPGESK
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 3 ECTPGE 8
EC PGE
Sbjct: 13 ECVPGE 18
>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain
Query: 2 TECTPG 7
T CTPG
Sbjct: 114 TNCTPG 119
>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)
Query: 2 TECTPG 7
T CTPG
Sbjct: 114 TNCTPG 119
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 2 TECTPGESK 10
T+C+ GE K
Sbjct: 448 TKCSNGEKK 456
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 TECTPGESK 10
T+C GE+K
Sbjct: 448 TKCRDGETK 456
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 ECTPGESK 10
E PGES+
Sbjct: 561 ELKPGESR 568
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 ECTPGESK 10
E PGES+
Sbjct: 561 ELKPGESR 568
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 ECTPGESK 10
E PGES+
Sbjct: 562 ELKPGESR 569
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 ECTPGESK 10
E PGES+
Sbjct: 561 ELKPGESR 568
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 ECTPGESK 10
E PGES+
Sbjct: 561 ELKPGESR 568
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 ECTPGESK 10
E PGES+
Sbjct: 555 ELKPGESR 562
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 ECTPGESK 10
E PGES+
Sbjct: 561 ELKPGESR 568
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 ECTPGESK 10
E PGES+
Sbjct: 561 ELKPGESR 568
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 ECTPGESK 10
E PGES+
Sbjct: 561 ELKPGESR 568
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 ECTPGESK 10
E PGES+
Sbjct: 561 ELKPGESR 568
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 1 GTECTP 6
GT C+P
Sbjct: 70 GTRCSP 75
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 TECTPGESK 10
+EC G+SK
Sbjct: 1030 SECVLGQSK 1038
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 TECTPGESK 10
+EC G+SK
Sbjct: 1012 SECVLGQSK 1020
>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30
Query: 4 CTPGES 9
C PGE+
Sbjct: 622 CVPGEN 627
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 3 ECTPGES 9
+C PGE+
Sbjct: 624 KCVPGEN 630
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 3 ECTPGES 9
+C PGE+
Sbjct: 628 KCVPGEN 634
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 3 ECTPGES 9
+C PGE+
Sbjct: 624 KCVPGEN 630
>sp|DYR_HHV8P|PUTATIVE Dihydrofolate reductase|Human herpesvirus 8 type P
Query: 2 TECTPGE 8
T+C PG+
Sbjct: 40 TDCAPGK 46
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 ECTPGESK 10
E PGES+
Sbjct: 561 ELKPGESR 568
>sp|VSSGP_EBOSU|SUPER small secreted glycoprotein|Sudan ebolavirus (strain
Query: 1 GTECTP 6
G+EC P
Sbjct: 118 GSECLP 123
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 ECTPGESK 10
E PGES+
Sbjct: 540 ELKPGESR 547
>sp|POLG_HAVLC|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 ECTPGESK 10
E PGES+
Sbjct: 65 ELKPGESR 72
>sp|NSS_PUUMS|NON-STRUCTURAL protein NS-S|Puumala virus (strain Sotkamo/V-2969/81)
Query: 2 TECTPGESK 10
T C PG +
Sbjct: 29 THCKPGNKQ 37
>sp|VP7_ROTKU|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 GTECT 5
GT+CT
Sbjct: 188 GTDCT 192
>sp|VP7_ROTHS|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 GTECT 5
GT+CT
Sbjct: 188 GTDCT 192
>sp|VP7_ROTHH|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 GTECT 5
GT+CT
Sbjct: 188 GTDCT 192
>sp|VP7_ROTHD|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 1 GTECT 5
GT+CT
Sbjct: 188 GTDCT 192
>sp|VP7_ROTHA|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 1 GTECT 5
GT+CT
Sbjct: 188 GTDCT 192
>sp|PHOSP_NIPAV|PHOSPHOPROTEIN virus
Query: 3 ECTPGESK 10
+CT GES+
Sbjct: 50 QCTSGESE 57
81|Sequence|401|410|PGESKNLGQK
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 PGESKNL 7
PGE KNL
Sbjct: 367 PGEVKNL 373
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 PGESKNL 7
PGE KNL
Sbjct: 369 PGEVKNL 375
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 PGESKNL 7
PGE KNL
Sbjct: 367 PGEVKNL 373
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 PGESKNL 7
PGE KNL
Sbjct: 367 PGEVKNL 373
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 PGESKNL 7
PGE KNL
Sbjct: 367 PGEVKNL 373
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 PGESKNL 7
PGE KNL
Sbjct: 367 PGEVKNL 373
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 PGESKNL 7
PGE KNL
Sbjct: 369 PGEVKNL 375
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 PGESKNL 7
PGE KNL
Sbjct: 369 PGEVKNL 375
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 PGESKNL 7
PGE KNL
Sbjct: 369 PGEVKNL 375
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 PGESKNL 7
PGE KN+
Sbjct: 378 PGEVKNM 384
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 GESKNLGQ 9
G S+NLG+
Sbjct: 114 GRSRNLGK 121
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 PGESKNL 7
PGE KN+
Sbjct: 378 PGEVKNM 384
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 PGESKNL 7
PGE KN+
Sbjct: 378 PGEVKNM 384
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 PGESKNL 7
PGE KN+
Sbjct: 377 PGEVKNM 383
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 PGESKNL 7
PGE +NL
Sbjct: 367 PGEVRNL 373
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PGESKNLGQK 10
PG K G+K
Sbjct: 73 PGSKKTQGEK 82
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PGESKNLGQK 10
PG K G+K
Sbjct: 73 PGSKKTQGEK 82
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PGESKNLGQK 10
PG K G+K
Sbjct: 73 PGSKKTQGEK 82
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PGESKNLGQK 10
PG K G+K
Sbjct: 73 PGSKKTQGEK 82
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PGESKNLGQK 10
PG K G+K
Sbjct: 73 PGSKKTQGEK 82
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 PGESKNL 7
PG S+NL
Sbjct: 404 PGASQNL 410
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PGESKNLGQK 10
PG K G+K
Sbjct: 73 PGSKKTQGEK 82
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PGESKNLGQK 10
PG K G+K
Sbjct: 73 PGSKKTQGEK 82
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PGESKNLGQK 10
PG K G+K
Sbjct: 73 PGSKKTQGEK 82
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 PGESKNL 7
PGE +NL
Sbjct: 360 PGEVRNL 366
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 PGESKNL 7
PGE +NL
Sbjct: 360 PGEVRNL 366
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 PGESKNL 7
PGE +NL
Sbjct: 360 PGEVRNL 366
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 PGESKNL 7
PGE +NL
Sbjct: 360 PGEVRNL 366
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 PGESKNL 7
PGE KN+
Sbjct: 377 PGEVKNV 383
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 PGESKNL 7
PGE +NL
Sbjct: 368 PGEVQNL 374
>sp|VE2_HPV54|REGULATORY protein E2|Human papillomavirus type 54
Query: 1 PGESKNLG 8
PG +KN G
Sbjct: 326 PGTTKNRG 333
82|Sequence|406|415|NLGQKENGNY
>sp|Y206_ADE07|UNCHARACTERIZED 20.6 kDa early protein|Human adenovirus B serotype 7
Query: 2 LGQKENG 8
LG++ENG
Sbjct: 98 LGREENG 104
>sp|RDRP_I61A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 NLGQKE 6
NLGQKE
Sbjct: 425 NLGQKE 430
>sp|RDRP_I88A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 NLGQKE 6
NLGQKE
Sbjct: 425 NLGQKE 430
>sp|RDRP_I67A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 NLGQKE 6
NLGQKE
Sbjct: 425 NLGQKE 430
>sp|RDRP_I77AD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 NLGQKE 6
NLGQKE
Sbjct: 425 NLGQKE 430
>sp|RDRP_I81A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 NLGQKE 6
NLGQKE
Sbjct: 425 NLGQKE 430
>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 NLGQKENGN 9
N GQKE N
Sbjct: 216 NFGQKEYYN 224
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 LGQKENGNY 10
L QK+ G+Y
Sbjct: 919 LSQKQEGHY 927
>sp|POLG_HCVE0|GENOME polyprotein|Hepatitis C virus (isolate EC10)
Query: 1 NLGQKEN 7
NLG K+N
Sbjct: 105 NLGAKQN 111
83|Sequence|411|420|ENGNYIMYAR
>sp|NPH2_MCV1|RNA helicase NPH-II|Molluscum contagiosum virus subtype 1
Query: 4 NYIMYAR 10
NYI+YAR
Sbjct: 539 NYIIYAR 545
>sp|NCAP_CHAVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Bolivia/810419/2003)
Query: 1 ENGNYIMYAR 10
E+GNYI+ R
Sbjct: 398 ESGNYILCYR 407
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 GNYIMYA 9
GN IMYA
Sbjct: 2834 GNIIMYA 2840
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 GNYIMYA 9
GN IMYA
Sbjct: 2835 GNIIMYA 2841
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 3 GNYIMYA 9
GN IMYA
Sbjct: 2832 GNIIMYA 2838
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GNYIMYA 9
GN IMYA
Sbjct: 2829 GNIIMYA 2835
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 3 GNYIMYA 9
GN IMYA
Sbjct: 2838 GNIIMYA 2844
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 GNYIMYA 9
GN IMYA
Sbjct: 2833 GNIIMYA 2839
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GNYIMYA 9
GN IMYA
Sbjct: 2829 GNIIMYA 2835
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 GNYIMYA 9
GN IMYA
Sbjct: 2840 GNIIMYA 2846
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GNYIMYA 9
GN IMYA
Sbjct: 2829 GNIIMYA 2835
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 GNYIMYA 9
GN IMYA
Sbjct: 2841 GNIIMYA 2847
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 GNYIMYA 9
GN IMYA
Sbjct: 2838 GNIIMYA 2844
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GNYIMYA 9
GN IMYA
Sbjct: 2829 GNIIMYA 2835
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GNYIMYA 9
GN IMYA
Sbjct: 2829 GNIIMYA 2835
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 GNYIMYA 9
GN IMYA
Sbjct: 2833 GNIIMYA 2839
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GNYIMYA 9
GN IMYA
Sbjct: 2829 GNIIMYA 2835
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GNYIMYA 9
GN IMYA
Sbjct: 2829 GNIIMYA 2835
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 ENGNYIMY 8
+NG+Y++Y
Sbjct: 1833 DNGHYVVY 1840
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 ENGNYIMY 8
+NG+Y++Y
Sbjct: 1833 DNGHYVVY 1840
>sp|UL95_HHV6Z|PROTEIN U67|Human herpesvirus 6B (strain Z29)
Query: 2 NGNYIMYAR 10
+G YI+Y +
Sbjct: 125 SGTYILYTK 133
>sp|UL95_HHV6H|PROTEIN U67|Human herpesvirus 6B (HHV-6 variant
Query: 2 NGNYIMYAR 10
+G YI+Y +
Sbjct: 125 SGTYILYTK 133
>sp|UL95_HHV6U|PROTEIN U67|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 NGNYIMYAR 10
+G YI+Y +
Sbjct: 125 SGKYILYTK 133
>sp|NPH2_VACCT|RNA helicase NPH-II|Vaccinia virus (strain Tian Tan)
Query: 4 NYIMYA 9
NYI+YA
Sbjct: 526 NYILYA 531
>sp|NPH2_VACCA|RNA helicase NPH-II|Vaccinia virus (strain Ankara) (VACV)
Query: 4 NYIMYA 9
NYI+YA
Sbjct: 526 NYILYA 531
>sp|NPH2_VACCC|RNA helicase NPH-II|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 NYIMYA 9
NYI+YA
Sbjct: 526 NYILYA 531
>sp|NPH2_MONPV|RNA helicase NPH-II|Monkeypox virus (MPXV)
Query: 4 NYIMYA 9
NYI+YA
Sbjct: 526 NYILYA 531
>sp|NPH2_VARV|RNA helicase NPH-II|Variola virus
Query: 4 NYIMYA 9
NYI+YA
Sbjct: 526 NYILYA 531
>sp|NPH2_VAR67|RNA helicase NPH-II|Variola virus (isolate Human/India/Ind3/1967)
Query: 4 NYIMYA 9
NYI+YA
Sbjct: 526 NYILYA 531
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 ENGNYIMY 8
EN +Y MY
Sbjct: 322 ENNDYPMY 329
>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)
Query: 1 ENGNYIMYAR 10
+ GNYI+ R
Sbjct: 398 DTGNYILCYR 407
>sp|UL95_HHV7J|PROTEIN U67|Human herpesvirus 7 (strain JI)
Query: 3 GNYIMYAR 10
G+YI+Y +
Sbjct: 117 GSYIIYTK 124
>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1
Query: 2 NGNYI 6
NGNYI
Sbjct: 110 NGNYI 114
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 3 GNYIMYA 9
GN IM+A
Sbjct: 2842 GNIIMFA 2848
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GNYIMYA 9
GN IM+A
Sbjct: 2830 GNIIMFA 2836
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 GNYIMYA 9
GN IM+A
Sbjct: 2830 GNIIMFA 2836
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 GNYIMYA 9
GN IM+A
Sbjct: 2830 GNIIMFA 2836
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 GNYIMYA 9
GN IM+A
Sbjct: 2837 GNIIMFA 2843
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 GNYIMYA 9
GN IM+A
Sbjct: 2830 GNIIMFA 2836
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 GNYIMYA 9
GN IM+A
Sbjct: 2838 GNIIMFA 2844
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 GNYIMYA 9
GN IM+A
Sbjct: 2830 GNIIMFA 2836
>sp|CEP2_HHV8P|CYTOPLASMIC envelopment protein 2|Human herpesvirus 8 type P
Query: 2 NGNYIMY 8
NG IMY
Sbjct: 77 NGEMIMY 83
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 GNYIMYA 9
GN I+YA
Sbjct: 2827 GNIIVYA 2833
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 ENGNYI 6
+NGN+I
Sbjct: 2667 DNGNFI 2672
84|Sequence|416|425|IMYARATSGD
>sp|P100_HHV6U|LARGE structural phosphoprotein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 IMYARATSGD 10
IM++R +GD
Sbjct: 570 IMHSREVTGD 579
>sp|MATRX_PI2HT|MATRIX protein|Human parainfluenza 2 virus (strain
Query: 2 MYARATSG 9
+YAR TSG
Sbjct: 62 VYARDTSG 69
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 IMYARATSGD 10
I YA+ SGD
Sbjct: 336 ICYAQLVSGD 345
>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 YARATSG 9
Y RAT+G
Sbjct: 409 YVRATAG 415
>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 YARATSG 9
Y RAT+G
Sbjct: 410 YVRATAG 416
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 IMYARATSGD 10
I+Y +T GD
Sbjct: 890 IIYRTSTQGD 899
>sp|UL28_HCMVA|UNCHARACTERIZED protein UL28|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 YARATSG 9
Y RAT+G
Sbjct: 88 YVRATAG 94
85|Sequence|421|430|ATSGDKLNNN
>sp|LF2_EBVB9|PROTEIN LF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 SGDKLNNN 10
SGDKLN +
Sbjct: 177 SGDKLNTS 184
>sp|LF2_EBVA8|PROTEIN LF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 SGDKLNNN 10
SGDKLN +
Sbjct: 177 SGDKLNTS 184
>sp|CVC2_VZVD|CAPSID vertex component 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 GDKLNNN 10
GDKL NN
Sbjct: 393 GDKLKNN 399
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 2 TSGDKLN 8
TSGDK++
Sbjct: 882 TSGDKID 888
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 2 TSGDKLN 8
TSGDK++
Sbjct: 884 TSGDKID 890
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 2 TSGDKLN 8
TSGDK++
Sbjct: 884 TSGDKID 890
>sp|CAPSD_HASV5|CAPSID polyprotein VP90|Human astrovirus-5 (HAstV-5)
Query: 1 ATSGDKL 7
AT+GD+L
Sbjct: 425 ATAGDRL 431
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 2 TSGDKLN 8
TSGDK++
Sbjct: 884 TSGDKID 890
86|Sequence|426|435|KLNNNKFSLC
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 1 KLNNNKFSLC 10
+LNN KF++C
Sbjct: 1614 RLNNAKFTVC 1623
>sp|VSGP_EBOSM|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 KLNNNKFSL 9
K+NNN F L
Sbjct: 235 KINNNTFVL 243
>sp|VSGP_EBOSB|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 KLNNNKFSL 9
K+NNN F L
Sbjct: 235 KINNNTFVL 243
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 KLNNNKFSL 9
K+NNN F L
Sbjct: 235 KINNNTFVL 243
>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 KLNNNKFSL 9
K+NNN F L
Sbjct: 235 KINNNTFVL 243
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 KLNNNKFSL 9
+LN+N++SL
Sbjct: 545 ELNSNRYSL 553
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 2 LNNNKFSL 9
+NN+K+SL
Sbjct: 1442 VNNDKYSL 1449
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 KLNNNKFS 8
K NN KFS
Sbjct: 228 KCNNKKFS 235
>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 3 NNNKFSLC 10
NNN +LC
Sbjct: 23 NNNTATLC 30
87|Sequence|431|440|KFSLCSIRNI
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 FSLCSIRN 9
+LCSIR+
Sbjct: 717 LNLCSIRD 724
>sp|PG021_VACC8|HOST range factor p28|Vaccinia virus (strain LC16m8) (VACV)
Query: 1 KFSLCSIRNI 10
+ ++C IRNI
Sbjct: 29 RLTVCIIRNI 38
>sp|PG021_VACC0|HOST range factor p28|Vaccinia virus (strain LC16m0) (VACV)
Query: 1 KFSLCSIRNI 10
+ ++C IRNI
Sbjct: 29 RLTVCIIRNI 38
>sp|PG021_MONPZ|HOST range factor p28|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 1 KFSLCSIRNI 10
+ ++C IRNI
Sbjct: 29 RLTVCIIRNI 38
>sp|PG021_CWPXG|HOST range factor p28|Cowpox virus (strain GRI-90 /
Query: 1 KFSLCSIRNI 10
+ ++C IRNI
Sbjct: 29 RLTVCIIRNI 38
>sp|VP7_ROTHS|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 3 SLCSIRN 9
S C+IRN
Sbjct: 242 STCTIRN 248
>sp|VP7_ROTKU|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 3 SLCSIRN 9
S C+IRN
Sbjct: 242 STCTIRN 248
>sp|PG021_MONPV|HOST range factor p28|Monkeypox virus (MPXV)
Query: 1 KFSLCSIRNI 10
+ ++C IRN+
Sbjct: 29 RLTVCIIRNV 38
88|Sequence|436|445|SIRNISQVLE
>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31
Query: 3 RNISQVLE 10
RNI QVL+
Sbjct: 172 RNILQVLK 179
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 2 IRNISQVLE 10
++N S++LE
Sbjct: 414 VKNCSKILE 422
89|Sequence|441|450|SQVLEKKRNN
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 SQVLEKKRNN 10
S +LEK RNN
Sbjct: 1323 SHILEKWRNN 1332
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 3 VLEKKRNN 10
VLEK+ NN
Sbjct: 1214 VLEKRMNN 1221
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 QVLEKKRNN 10
+LEK RNN
Sbjct: 1324 HILEKWRNN 1332
>sp|FUS_NIPAV|FUSION glycoprotein F0|Nipah virus
Query: 3 VLEKKRN 9
++EKKRN
Sbjct: 517 IVEKKRN 523
>sp|FUS_HENDH|FUSION glycoprotein F0|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 VLEKKRNN 10
++EKKR N
Sbjct: 517 IVEKKRGN 524
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 4 LEKKRNN 10
LEK+ NN
Sbjct: 1215 LEKRMNN 1221
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 4 LEKKRNN 10
LEK+ NN
Sbjct: 1215 LEKRMNN 1221
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 4 LEKKRNN 10
LEK+ NN
Sbjct: 1215 LEKRMNN 1221
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 4 LEKKRNN 10
LEK+ NN
Sbjct: 1215 LEKRMNN 1221
90|Sequence|446|455|KKRNNCFVES
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 RNNCFVES 10
RNNC++ S
Sbjct: 1071 RNNCWLRS 1078
Query: 1 KKRNNCFV 8
+ NNCFV
Sbjct: 1666 QANNNCFV 1673
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 RNNCFVES 10
RNNC++ S
Sbjct: 1071 RNNCWLRS 1078
Query: 1 KKRNNCFV 8
+ NNCFV
Sbjct: 1666 QANNNCFV 1673
>sp|NCAP_CHAVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Bolivia/810419/2003)
Query: 1 KKRNNCFVE 9
KKR N F++
Sbjct: 282 KKRENMFID 290
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 4 NNCFVES 10
N+C+VE+
Sbjct: 32 NSCYVET 38
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 KKRNNCFV 8
+ NNC+V
Sbjct: 1722 QSHNNCYV 1729
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 KKRNNCFV 8
+ NNC+V
Sbjct: 1702 QSHNNCYV 1709
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 KKRNNCFV 8
+ NNC+V
Sbjct: 1752 QSHNNCYV 1759
>sp|VE2_HPV11|REGULATORY protein E2|Human papillomavirus 11
Query: 1 KKRNNC 6
++RNNC
Sbjct: 274 QRRNNC 279
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 KKRNNCFV 8
+ NNC+V
Sbjct: 1722 QSHNNCYV 1729
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 4 NNCF 7
NNCF
Sbjct: 273 NNCF 276
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 4 NNCF 7
NNCF
Sbjct: 272 NNCF 275
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 KKRNNCFV 8
+ NNC+V
Sbjct: 1702 QSHNNCYV 1709
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 KKRNNCFV 8
+ NNC+V
Sbjct: 1752 QSHNNCYV 1759
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 4 NNCFVE 9
N+CF E
Sbjct: 306 NHCFTE 311
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 4 NNCFVE 9
N+CF E
Sbjct: 306 NHCFTE 311
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 4 NNCFVE 9
N+CF E
Sbjct: 306 NHCFTE 311
>sp|U79_HHV6Z|PROTEIN U79|Human herpesvirus 6B (strain Z29)
Query: 4 NNCFVE 9
N CF+E
Sbjct: 35 NGCFIE 40
>sp|U79_HHV6H|PROTEIN U79/U80|Human herpesvirus 6B (HHV-6 variant
Query: 4 NNCFVE 9
N CF+E
Sbjct: 35 NGCFIE 40
>sp|VE8E2_HPV11|PROTEIN E8^E2C|Human papillomavirus 11
Query: 1 KKRNNC 6
++RNNC
Sbjct: 84 QRRNNC 89
91|Sequence|451|460|CFVESGQPIC
>sp|VL2_HPV35|MINOR capsid protein L2|Human papillomavirus 35
Query: 2 FVESGQPI 9
F+ESG P+
Sbjct: 118 FIESGAPV 125
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 2 FVESGQPI 9
FVE+GQ I
Sbjct: 524 FVETGQTI 531
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 FVESGQPI 9
FVE+GQ I
Sbjct: 524 FVETGQTI 531
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 FVESGQPI 9
FVE+GQ I
Sbjct: 524 FVETGQTI 531
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 2 FVESGQPI 9
FVE+GQ I
Sbjct: 524 FVETGQTI 531
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 2 FVESGQPI 9
FVE G P+
Sbjct: 107 FVEDGSPV 114
>sp|REP_HCYV5|REPLICATION-ASSOCIATED protein|Human associated cyclovirus 1 (isolate
Query: 2 FVESGQPIC 10
F E+G P C
Sbjct: 95 FFEAGDPQC 103
>sp|VL2_HPV67|MINOR capsid protein L2|Human papillomavirus 67
Query: 2 FVESGQP 8
F+ESG P
Sbjct: 113 FIESGAP 119
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CFVESG 6
CFV+SG
Sbjct: 1020 CFVKSG 1025
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CFVESG 6
CFV+SG
Sbjct: 1020 CFVKSG 1025
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CFVESG 6
CFV+SG
Sbjct: 1020 CFVKSG 1025
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CFVESG 6
CFV+SG
Sbjct: 1020 CFVKSG 1025
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CFVESG 6
CFV+SG
Sbjct: 1020 CFVKSG 1025
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CFVESG 6
CFV+SG
Sbjct: 1020 CFVKSG 1025
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CFVESG 6
CFV+SG
Sbjct: 1020 CFVKSG 1025
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CFVESG 6
CFV+SG
Sbjct: 1020 CFVKSG 1025
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CFVESG 6
CFV+SG
Sbjct: 1020 CFVKSG 1025
>sp|NSP3_ROTHC|NON-STRUCTURAL protein 3|Rotavirus C (isolate RVC/Human/United
Query: 2 FVESGQPI 9
+ ESGQP+
Sbjct: 220 YNESGQPL 227
>sp|VL2_HPV52|MINOR capsid protein L2|Human papillomavirus 52
Query: 2 FVESGQP 8
F+ESG P
Sbjct: 113 FIESGAP 119
>sp|GLYCO_VSNJO|GLYCOPROTEIN stomatitis New Jersey virus
Query: 3 VESGQPIC 10
+ESG+PI
Sbjct: 311 IESGEPIT 318
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CFVESG 6
CF++SG
Sbjct: 1014 CFIKSG 1019
>sp|KRB2_VACCC|PSEUDOKINASE OPG198|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 CFVESGQPI 9
CF E +P+
Sbjct: 245 CFPEGNEPL 253
>sp|KRB2_VACCA|PSEUDOKINASE OPG198|Vaccinia virus (strain Ankara) (VACV)
Query: 1 CFVESGQPI 9
CF E +P+
Sbjct: 245 CFPEGNEPL 253
>sp|KRB2_MONPV|PSEUDOKINASE OPG198|Monkeypox virus (MPXV)
Query: 1 CFVESGQPI 9
CF E +P+
Sbjct: 244 CFPEGNEPL 252
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 2 FVESGQPIC 10
F+E+ Q IC
Sbjct: 996 FLEAPQDIC 1004
>sp|VE1_HPV63|REPLICATION protein E1|Human papillomavirus type 63
Query: 2 FVESGQP 8
F E+GQP
Sbjct: 563 FDENGQP 569
>sp|TAT_HV197|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 1 CFVESGQPIC 10
CF++ G IC
Sbjct: 37 CFLQKGLGIC 46
>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)
Query: 2 FVESGQP 8
F+E+G+P
Sbjct: 293 FLENGKP 299
>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain
Query: 2 FVESGQP 8
F+E+G+P
Sbjct: 302 FLENGKP 308
>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)
Query: 2 FVESGQP 8
F+E+G+P
Sbjct: 302 FLENGKP 308
>sp|VL2_HPV33|MINOR capsid protein L2|Human papillomavirus 33
Query: 2 FVESGQP 8
F+E+G P
Sbjct: 113 FIEAGAP 119
>sp|TAT_HV2KR|PROTEIN Tat|Human immunodeficiency virus type 2
Query: 1 CFVESGQPIC 10
CF++ G IC
Sbjct: 66 CFLKKGLGIC 75
>sp|TAT_HV2EH|PROTEIN Tat|Human immunodeficiency virus type 2
Query: 1 CFVESGQPIC 10
CF++ G IC
Sbjct: 66 CFLKKGLGIC 75
>sp|E1A_ADE02|EARLY E1A protein|Human adenovirus C serotype 2
Query: 4 ESGQPI 9
ESGQP+
Sbjct: 275 ESGQPL 280
>sp|TAT_HV2D2|PROTEIN Tat|Human immunodeficiency virus type 2
Query: 1 CFVESGQPIC 10
CF++ G IC
Sbjct: 66 CFLKKGLGIC 75
>sp|VE2_HPV18|REGULATORY protein E2|Human papillomavirus type 18
Query: 1 CFVESGQPI 9
CF + GQ +
Sbjct: 113 CFKKGGQTV 121
>sp|VE2_HPV30|REGULATORY protein E2|Human papillomavirus 30
Query: 1 CFVESGQPI 9
CF +SG+ I
Sbjct: 109 CFKKSGKRI 117
92|Sequence|456|465|GQPICGNGMV
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 PICGNGMV 10
P+C NG+V
Sbjct: 5392 PLCANGLV 5399
Query: 3 PICGNG 8
P+CG+G
Sbjct: 34 PLCGSG 39
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 GQPICGNGMV 10
G P+C NG++
Sbjct: 780 GTPVCVNGLM 789
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 GQPICGNGMV 10
G P+C NG++
Sbjct: 780 GTPVCVNGLM 789
Query: 3 PICGNGMV 10
P+C NG V
Sbjct: 5383 PLCANGQV 5390
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 GQPICGNGMV 10
G P+C NG++
Sbjct: 780 GTPVCINGLM 789
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 GQPICGNGMV 10
G P+C NG++
Sbjct: 780 GTPVCINGLM 789
Query: 3 PICGNGMV 10
P+C NG V
Sbjct: 5406 PLCANGQV 5413
>sp|UL15A_HCMVA|UNCHARACTERIZED protein UL15A|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GQPICGNG 8
G PICG+G
Sbjct: 28 GAPICGSG 35
>sp|ORF45_HHV8P|PROTEIN ORF45|Human herpesvirus 8 type P
Query: 3 PICGNG 8
P+CGNG
Sbjct: 394 PLCGNG 399
>sp|NEF_HV1EL|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 QPICGNGM 9
PIC +GM
Sbjct: 167 HPICQHGM 174
>sp|NEF_HV19N|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 QPICGNGM 9
PIC +GM
Sbjct: 167 HPICQHGM 174
>sp|NEF_HV1SE|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 QPICGNGM 9
PIC +GM
Sbjct: 167 HPICQHGM 174
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 ICGNGMV 10
ICG+G++
Sbjct: 2700 ICGDGLI 2706
Query: 5 CGNGMV 10
CGN MV
Sbjct: 2017 CGNSMV 2022
Query: 1 GQPICGNGM 9
G P NGM
Sbjct: 219 GSPFITNGM 227
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 3 PICGNG 8
P+C NG
Sbjct: 812 PVCSNG 817
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 4 ICGNGMV 10
ICG+G++
Sbjct: 2700 ICGDGLI 2706
Query: 5 CGNGMV 10
CGN MV
Sbjct: 2017 CGNSMV 2022
Query: 1 GQPICGNGM 9
G P NGM
Sbjct: 219 GSPFITNGM 227
>sp|YHL4_HCMVA|UNCHARACTERIZED protein HHLF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 QPICG 6
QP+CG
Sbjct: 100 QPVCG 104
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related
Query: 3 PICGNG 8
P+CG+G
Sbjct: 34 PLCGSG 39
>sp|NEF_HV1Z6|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 QPICGNGM 9
P+C +GM
Sbjct: 172 HPVCQHGM 179
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 GQPICGNGMV 10
G P CG +V
Sbjct: 1214 GNPGCGKSLV 1223
>sp|NEF_HV1RH|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 QPICGNGM 9
PIC +GM
Sbjct: 168 HPICLHGM 175
>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)
Query: 1 GQPICGNGMV 10
G P CG M+
Sbjct: 338 GPPGCGKSML 347
>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 GQPICGNGMV 10
G P CG M+
Sbjct: 338 GPPGCGKSML 347
>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant
Query: 1 GQPICGNGMV 10
G P CG M+
Sbjct: 338 GPPGCGKSML 347
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 1 GQPICGNGM 9
G P CG M
Sbjct: 437 GPPDCGKSM 445
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 ICGNGMV 10
IC GMV
Sbjct: 145 ICATGMV 151
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 ICGNGMV 10
IC GMV
Sbjct: 145 ICATGMV 151
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 ICGNGMV 10
IC GMV
Sbjct: 145 ICATGMV 151
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 4 ICGNGMV 10
+CG+G V
Sbjct: 542 VCGDGFV 548
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 4 ICGNGMV 10
+CG+G V
Sbjct: 542 VCGDGFV 548
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 4 ICGNGMV 10
+CG+G V
Sbjct: 542 VCGDGFV 548
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 ICGNGMV 10
+CG+G V
Sbjct: 542 VCGDGFV 548
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 ICGNGMV 10
+CG+G V
Sbjct: 542 VCGDGFV 548
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 ICGNGMV 10
+CG+G V
Sbjct: 542 VCGDGFV 548
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 ICGNGMV 10
+CG G+V
Sbjct: 302 VCGEGVV 308
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 GQPICGNGMV 10
P CG G +
Sbjct: 691 ANPFCGEGTL 700
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 GQPICGNGMV 10
P CG G +
Sbjct: 691 ANPFCGEGTL 700
>sp|MATRX_PI3H4|MATRIX protein|Human parainfluenza 3 virus (strain
Query: 1 GQPICGNG 8
G +CG+G
Sbjct: 83 GYKVCGSG 90
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 5 CGNGM 9
CGNG+
Sbjct: 802 CGNGI 806
>sp|CEP1_VZVD|CYTOPLASMIC envelopment protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 GQPICGNGMV 10
G P C +G+V
Sbjct: 273 GTPPCPDGVV 282
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 5 CGNG 8
CGNG
Sbjct: 151 CGNG 154
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 CGNG 8
CGNG
Sbjct: 151 CGNG 154
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 5 CGNGMV 10
CG G+V
Sbjct: 791 CGEGLV 796
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 5 CGNGMV 10
CG G+V
Sbjct: 791 CGEGLV 796
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 5 CGNGMV 10
CG G+V
Sbjct: 791 CGEGLV 796
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 5 CGNGMV 10
CG G+V
Sbjct: 791 CGEGLV 796
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 5 CGNGMV 10
CG G+V
Sbjct: 791 CGEGLV 796
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 5 CGNG 8
CGNG
Sbjct: 1109 CGNG 1112
93|Sequence|461|470|GNGMVEQGEE
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 GNGMVEQGEE 10
G G +QGEE
Sbjct: 2634 GGGETDQGEE 2643
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 GNGMVEQGEE 10
G G +QGEE
Sbjct: 2612 GGGETDQGEE 2621
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GNGMVEQGEE 10
GNG VE+ E+
Sbjct: 139 GNGKVEEEEK 148
Query: 2 NGMVEQGEE 10
N MVEQ E
Sbjct: 97 NNMVEQMHE 105
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 2 NGMVEQGEE 10
NG+VEQ E
Sbjct: 1067 NGIVEQESE 1075
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 NGMVEQGEE 10
N MVEQ +E
Sbjct: 97 NNMVEQMQE 105
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GMVEQGE 9
GM+E+GE
Sbjct: 148 GMMEKGE 154
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 NGMVEQGEE 10
N MVEQ +E
Sbjct: 97 NNMVEQMQE 105
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 NGMVEQGEE 10
N MVEQ +E
Sbjct: 97 NNMVEQMQE 105
Query: 3 GMVEQGE 9
GM+E+GE
Sbjct: 144 GMMERGE 150
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 NGMVEQGEE 10
N MVEQ +E
Sbjct: 97 NNMVEQMQE 105
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 NGMVEQGEE 10
N MVEQ E
Sbjct: 97 NNMVEQMHE 105
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 NGMVEQGEE 10
N MVEQ E
Sbjct: 97 NNMVEQMHE 105
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 NGMVEQGEE 10
N MVEQ E
Sbjct: 97 NNMVEQMHE 105
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 NGMVEQGEE 10
N MVEQ E
Sbjct: 97 NNMVEQMHE 105
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 NGMVEQGEE 10
N MVEQ E
Sbjct: 103 NNMVEQMHE 111
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 NGMVEQGEE 10
N MVEQ E
Sbjct: 97 NNMVEQMHE 105
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 NGMVEQGEE 10
N MVEQ E
Sbjct: 99 NNMVEQMHE 107
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 GNGMVEQGEE 10
G G +QGE+
Sbjct: 2607 GGGETDQGEK 2616
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 NGMVEQGEE 10
N MVEQ E
Sbjct: 97 NNMVEQMHE 105
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 NGMVEQGEE 10
N MVEQ E
Sbjct: 97 NNMVEQMHE 105
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 NGMVEQGEE 10
N MVEQ E
Sbjct: 97 NNMVEQMHE 105
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 NGMVEQGEE 10
N MVEQ E
Sbjct: 97 NNMVEQMHE 105
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 NGMVEQGEE 10
N MVEQ E
Sbjct: 97 NNMVEQMHE 105
>sp|VL1_HPV22|MAJOR capsid protein L1|Human papillomavirus 22
Query: 2 NGMVEQGE 9
NG++E G+
Sbjct: 192 NGVIEDGD 199
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 NGMVEQGEE 10
N MVEQ E
Sbjct: 97 NNMVEQMHE 105
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 NGMVEQGEE 10
N MVEQ E
Sbjct: 97 NNMVEQMHE 105
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 NGMVEQGEE 10
N MVEQ E
Sbjct: 97 NNMVEQMHE 105
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 5 VEQGEE 10
+EQGEE
Sbjct: 169 IEQGEE 174
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 5 VEQGEE 10
+EQGEE
Sbjct: 169 IEQGEE 174
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 2 NGMVEQG 8
NG +EQG
Sbjct: 48 NGELEQG 54
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 2 NGMVEQG 8
NG +EQG
Sbjct: 48 NGELEQG 54
94|Sequence|466|475|EQGEECDCGY
>sp|NRAM_INBOR|NEURAMINIDASE B virus (strain B/Oregon/5/1980)
Query: 1 EQGEECDCGY 10
E EEC CG+
Sbjct: 272 EHTEECTCGF 281
>sp|NRAM_INBHK|NEURAMINIDASE B virus (strain B/Hong
Query: 1 EQGEECDCGY 10
E EEC CG+
Sbjct: 272 EHTEECTCGF 281
>sp|NRAM_INBSI|NEURAMINIDASE B virus (strain B/Singapore/222/1979)
Query: 1 EQGEECDCGY 10
E EEC CG+
Sbjct: 272 EHTEECTCGF 281
>sp|NRAM_INBYB|NEURAMINIDASE B virus (strain B/Yamagata/16/1988)
Query: 1 EQGEECDCGY 10
E EEC CG+
Sbjct: 272 EHTEECTCGF 281
>sp|NRAM_INBVI|NEURAMINIDASE B virus (strain B/Victoria/3/1985)
Query: 1 EQGEECDCGY 10
E EEC CG+
Sbjct: 271 EHTEECTCGF 280
>sp|NRAM_INBMD|NEURAMINIDASE B virus (strain B/Maryland/1959)
Query: 1 EQGEECDCGY 10
E EEC CG+
Sbjct: 272 EHTEECTCGF 281
>sp|NRAM_INBBE|NEURAMINIDASE B virus (strain B/Beijing/1/1987)
Query: 1 EQGEECDCGY 10
E EEC CG+
Sbjct: 271 EHTEECTCGF 280
>sp|NRAM_INBME|NEURAMINIDASE B virus (strain B/Memphis/6/1986)
Query: 1 EQGEECDCGY 10
E EEC CG+
Sbjct: 271 EHTEECTCGF 280
>sp|NRAM_INBLN|NEURAMINIDASE B virus (strain B/Leningrad/179/1986)
Query: 1 EQGEECDCGY 10
E EEC CG+
Sbjct: 271 EHTEECTCGF 280
>sp|NRAM_INBUS|NEURAMINIDASE B virus (strain B/USSR/100/1983)
Query: 1 EQGEECDCGY 10
E EEC CG+
Sbjct: 272 EHTEECTCGF 281
>sp|NRAM_INBLE|NEURAMINIDASE B virus (strain B/Lee/1940)
Query: 1 EQGEECDCGY 10
E EEC CG+
Sbjct: 272 EHTEECTCGF 281
>sp|NRAM_INBMF|NEURAMINIDASE B virus (strain B/Memphis/3/1989)
Query: 1 EQGEECDCGY 10
E EEC CG+
Sbjct: 271 EHTEECTCGF 280
>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60
Query: 1 EQGEECDCGY 10
+ GE CD G+
Sbjct: 198 QDGEMCDTGF 207
>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65
Query: 1 EQGEECDCGY 10
E G+ CD G+
Sbjct: 197 EDGDMCDIGF 206
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 6 CDCGY 10
CDCG+
Sbjct: 352 CDCGF 356
Query: 6 CDCG 9
CDCG
Sbjct: 1785 CDCG 1788
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 6 CDCGY 10
CDCG+
Sbjct: 352 CDCGF 356
Query: 6 CDCG 9
CDCG
Sbjct: 1805 CDCG 1808
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 6 CDCGY 10
CDCG+
Sbjct: 352 CDCGF 356
Query: 6 CDCG 9
CDCG
Sbjct: 1835 CDCG 1838
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 6 CDCGY 10
CDCG+
Sbjct: 352 CDCGF 356
Query: 6 CDCG 9
CDCG
Sbjct: 1785 CDCG 1788
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 6 CDCGY 10
CDCG+
Sbjct: 352 CDCGF 356
Query: 6 CDCG 9
CDCG
Sbjct: 1805 CDCG 1808
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 6 CDCGY 10
CDCG+
Sbjct: 352 CDCGF 356
Query: 6 CDCG 9
CDCG
Sbjct: 1835 CDCG 1838
>sp|PAP_HHV8P|DNA polymerase processivity factor|Human herpesvirus 8 type P
Query: 2 QGEECDCG 9
+GE CD G
Sbjct: 113 KGEACDTG 120
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 3 GEECDC 8
G+EC C
Sbjct: 478 GQECSC 483
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 EQGEECDCG 9
E +ECD G
Sbjct: 950 EASKECDTG 958
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 6 CDCG 9
CDCG
Sbjct: 1338 CDCG 1341
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 GEECDCG 9
G+E DCG
Sbjct: 1444 GKELDCG 1450
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 GEECDC 8
G+EC C
Sbjct: 478 GQECTC 483
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 GEECDC 8
G+EC C
Sbjct: 478 GQECTC 483
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 GEECDC 8
G+EC C
Sbjct: 478 GQECTC 483
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 GEECDC 8
G+EC C
Sbjct: 478 GQECTC 483
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 GEECDC 8
G+EC C
Sbjct: 478 GQECTC 483
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 GEECDC 8
G+EC C
Sbjct: 478 GQECTC 483
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 6 CDCG 9
CDCG
Sbjct: 1134 CDCG 1137
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 GEECDC 8
G+EC C
Sbjct: 478 GQECTC 483
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 6 CDCG 9
CDCG
Sbjct: 1134 CDCG 1137
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 ECDCG 9
EC+CG
Sbjct: 533 ECECG 537
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 ECDCG 9
EC+CG
Sbjct: 533 ECECG 537
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 ECDCG 9
EC+CG
Sbjct: 533 ECECG 537
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 ECDCG 9
EC+CG
Sbjct: 532 ECECG 536
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 EQGEECDCG 9
E ECD G
Sbjct: 950 ESTHECDTG 958
>sp|ICP22_HHV2H|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (strain HG52)
Query: 3 GEECDCG 9
G ECD G
Sbjct: 281 GPECDVG 287
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 2 QGEECDCG 9
+GE+CD G
Sbjct: 430 RGEKCDEG 437
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 2 QGEECDCG 9
+GE+CD G
Sbjct: 429 RGEKCDEG 436
>sp|VP7_ROTJ1|OUTER capsid glycoprotein VP7|Rotavirus X (strain
Query: 2 QGEECDCGY 10
Q ++C+C Y
Sbjct: 70 QMQKCNCIY 78
>sp|VP7_ROTB2|OUTER capsid glycoprotein VP7|Rotavirus X (isolate
Query: 2 QGEECDCGY 10
Q ++C+C Y
Sbjct: 70 QMQKCNCLY 78
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 5 ECDCG 9
EC CG
Sbjct: 528 ECKCG 532
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 5 ECDCG 9
EC CG
Sbjct: 519 ECKCG 523
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 5 ECDCG 9
EC CG
Sbjct: 528 ECKCG 532
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 1 EQGEECDCGY 10
E G+ D GY
Sbjct: 223 EDGDMVDTGY 232
>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29
Query: 1 EQGEECDCGY 10
E G+ D GY
Sbjct: 196 EDGDMVDTGY 205
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 1 EQGEECDCGY 10
E G+ D GY
Sbjct: 257 EDGDMVDTGY 266
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 EQGEECDCG 9
E ECD G
Sbjct: 950 EPTHECDTG 958
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 EQGEECDCG 9
E ECD G
Sbjct: 950 EPTHECDTG 958
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 EQGEECDCG 9
E ECD G
Sbjct: 950 EPTHECDTG 958
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 EQGEECDCG 9
E ECD G
Sbjct: 950 EPTHECDTG 958
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 4 EECDCG 9
E C CG
Sbjct: 1125 EPCKCG 1130
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 1 EQGEECDCG 9
E GE+ D G
Sbjct: 519 EDGEQTDSG 527
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 1 EQGEECDCGY 10
E G+ D GY
Sbjct: 225 EDGDMADIGY 234
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 5 ECDCG 9
EC CG
Sbjct: 528 ECKCG 532
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 QGEECD 7
+GE CD
Sbjct: 652 RGERCD 657
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 QGEECD 7
+GE CD
Sbjct: 648 RGERCD 653
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 QGEECD 7
+GE CD
Sbjct: 656 RGERCD 661
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 QGEECD 7
+GE CD
Sbjct: 649 RGERCD 654
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 QGEECD 7
+GE CD
Sbjct: 654 RGERCD 659
Query: 4 EECDCG 9
E C CG
Sbjct: 1127 EPCTCG 1132
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 QGEECD 7
+GE CD
Sbjct: 648 RGERCD 653
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 QGEECD 7
+GE CD
Sbjct: 648 RGERCD 653
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 QGEECD 7
+GE CD
Sbjct: 648 RGERCD 653
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 QGEECD 7
+GE CD
Sbjct: 648 RGERCD 653
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 QGEECD 7
+GE CD
Sbjct: 654 RGERCD 659
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 QGEECD 7
+GE CD
Sbjct: 648 RGERCD 653
>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68
Query: 1 EQGEECDCGY 10
E G+ D GY
Sbjct: 196 EDGDMIDTGY 205
>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39
Query: 1 EQGEECDCGY 10
E G+ D GY
Sbjct: 195 EDGDMIDTGY 204
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 QGEECD 7
+GE CD
Sbjct: 648 RGERCD 653
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 QGEECD 7
+GE CD
Sbjct: 648 RGERCD 653
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 1 EQGEECDCGY 10
E G+ D GY
Sbjct: 198 EDGDMADIGY 207
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 4 EECDCG 9
E C CG
Sbjct: 1125 EPCTCG 1130
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 4 EECDCG 9
E C CG
Sbjct: 1125 EPCTCG 1130
>sp|PG181_VACCA|PROTEIN OPG181|Vaccinia virus (strain Ankara) (VACV)
Query: 4 EECDCGY 10
+EC C Y
Sbjct: 242 DECRCCY 248
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 1 EQGEECDCGY 10
E G+ D GY
Sbjct: 196 EDGDMADIGY 205
>sp|US32_HCMVM|PROTEIN US32|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 QGEECDCG 9
G CDCG
Sbjct: 20 HGLWCDCG 27
>sp|US32_HCMVA|UNCHARACTERIZED protein HHRF7|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 QGEECDCG 9
G CDCG
Sbjct: 20 HGLWCDCG 27
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 QGEECD 7
+GE CD
Sbjct: 648 RGERCD 653
>sp|PG192_VACCC|PROTEIN OPG192|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 EECDCGY 10
E CD G+
Sbjct: 66 ESCDVGF 72
>sp|VL1_HPV70|MAJOR capsid protein L1|Human papillomavirus type 70
Query: 1 EQGEECDCGY 10
E G+ D GY
Sbjct: 194 EDGDMIDTGY 203
>sp|PG192_MONPV|PROTEIN OPG192|Monkeypox virus (MPXV)
Query: 4 EECDCGY 10
E CD G+
Sbjct: 66 ESCDVGF 72
>sp|PG181_VARV|PROTEIN OPG181|Variola virus
Query: 4 EECDCGY 10
+EC C Y
Sbjct: 246 DECRCCY 252
>sp|PG181_VAR67|PROTEIN OPG181|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 EECDCGY 10
+EC C Y
Sbjct: 246 DECRCCY 252
>sp|PG181_MONPV|PROTEIN OPG181|Monkeypox virus (MPXV)
Query: 4 EECDCGY 10
+EC C Y
Sbjct: 246 DECRCCY 252
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 2 QGEECD 7
+GE CD
Sbjct: 648 RGERCD 653
>sp|PG181_VACCC|PROTEIN OPG181|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 EECDCGY 10
+EC C Y
Sbjct: 246 DECRCCY 252
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 1 EQG-EECDCGY 10
E+G CDC Y
Sbjct: 1022 EEGLSRCDCIY 1032
>sp|CCU83_HHV6Z|PUTATIVE CC-type chemokine U83|Human herpesvirus 6B (strain Z29)
Query: 1 EQGEECD 7
EQG CD
Sbjct: 71 EQGSMCD 77
95|Sequence|471|480|CDCGYSDQCK
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 3 CGYSDQCK 10
CGYSD+ K
Sbjct: 74 CGYSDRLK 81
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 2 DCGYSDQCK 10
+CGYSD+ +
Sbjct: 75 ECGYSDRAR 83
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 2 DCGYSDQCK 10
+CGYSD+ +
Sbjct: 75 ECGYSDRVR 83
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 2 DCGYSDQCK 10
+CGYSD+ +
Sbjct: 75 ECGYSDRVR 83
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 2 DCGYSDQCK 10
+CGYSD+ +
Sbjct: 75 ECGYSDRVR 83
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 2 DCGYSDQCK 10
+CGYSD+ +
Sbjct: 75 ECGYSDRVR 83
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 DCGYSDQCK 10
+CGYSD+ +
Sbjct: 75 ECGYSDRVR 83
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 2 DCGYSDQCK 10
+CGYSD+ +
Sbjct: 75 ECGYSDRVR 83
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 2 DCGYSDQCK 10
+CGYSD+ +
Sbjct: 75 ECGYSDRVR 83
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 DCGYSDQCK 10
+CGYSD+ +
Sbjct: 75 ECGYSDRVR 83
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 2 DCGYSDQCK 10
+CGYSD+ +
Sbjct: 75 ECGYSDRVR 83
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 DCGYSDQCK 10
+CGYSD+ +
Sbjct: 75 ECGYSDRVR 83
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 2 DCGYSDQCK 10
+CGYSD+ +
Sbjct: 75 ECGYSDRVR 83
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 2 DCGYSDQCK 10
+CGYSD+ +
Sbjct: 75 ECGYSDRVR 83
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 2 DCGYSDQCK 10
+CGYSD+ +
Sbjct: 75 ECGYSDRVR 83
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 2 DCGYSDQCK 10
+CGYSD+ +
Sbjct: 75 ECGYSDRVR 83
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 3 CGYSDQCK 10
CGYSD+ +
Sbjct: 76 CGYSDRVR 83
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 3 CGYSDQCK 10
CGYSD+ +
Sbjct: 76 CGYSDRVR 83
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 3 CGYSDQCK 10
CGYSD+ +
Sbjct: 76 CGYSDRVQ 83
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 3 CGYSDQCK 10
CGYSD+ +
Sbjct: 76 CGYSDRVQ 83
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 DCGYSDQCK 10
DCG + CK
Sbjct: 2102 DCGSKEDCK 2110
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 3 CGYSDQ 8
CGYSD+
Sbjct: 76 CGYSDR 81
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 3 CGYSDQ 8
CGYSD+
Sbjct: 76 CGYSDR 81
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 3 CGYSDQ 8
CGYSD+
Sbjct: 76 CGYSDR 81
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 3 CGYSDQ 8
CGYSD+
Sbjct: 76 CGYSDR 81
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 3 CGYSDQ 8
CGYSD+
Sbjct: 76 CGYSDR 81
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 3 CGYSDQ 8
CGYSD+
Sbjct: 76 CGYSDR 81
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 3 CGYSDQ 8
CGYSD+
Sbjct: 76 CGYSDR 81
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 3 CGYSDQ 8
CGYSD+
Sbjct: 76 CGYSDR 81
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 3 CGYSDQ 8
CGYSD+
Sbjct: 76 CGYSDR 81
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 3 CGYSDQ 8
CGYSD+
Sbjct: 76 CGYSDR 81
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 3 CGYSDQ 8
CGYSD+
Sbjct: 76 CGYSDR 81
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 3 CGYSDQ 8
CGYSD+
Sbjct: 76 CGYSDR 81
>sp|UL136_HCMVM|PROTEIN UL136|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CDCGYSDQCK 10
C C Y ++C+
Sbjct: 106 CGCHYPEKCR 115
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 3 CGYSDQ 8
CGYSD+
Sbjct: 76 CGYSDR 81
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 3 CGYSDQ 8
CGYSD+
Sbjct: 76 CGYSDR 81
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 3 CGYSDQ 8
CGYSD+
Sbjct: 76 CGYSDR 81
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 2 DCGYSDQ 8
+CG++DQ
Sbjct: 325 ECGFTDQ 331
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 3 CGYSDQ 8
CGYSD+
Sbjct: 76 CGYSDR 81
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 3 CGYSDQ 8
CGYSD+
Sbjct: 76 CGYSDR 81
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 2 DCGYSDQCK 10
+CG+SD+ +
Sbjct: 75 ECGFSDRVR 83
>sp|IL10H_EBVG|VIRAL interleukin-10 homolog|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 DCGYSDQC 9
+CG +DQC
Sbjct: 20 ECGGTDQC 27
>sp|IL10H_EBVB9|VIRAL interleukin-10 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 DCGYSDQC 9
+CG +DQC
Sbjct: 20 ECGGTDQC 27
>sp|IL10H_EBVA8|VIRAL interleukin-10 homolog|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 DCGYSDQC 9
+CG +DQC
Sbjct: 20 ECGGTDQC 27
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 DCGYSDQCK 10
+CG+SD+ +
Sbjct: 75 ECGFSDRVR 83
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 DCGYSDQCK 10
+CG+SD+ +
Sbjct: 75 ECGFSDRVR 83
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 CGYSDQ 8
CG++DQ
Sbjct: 326 CGFTDQ 331
>sp|UL136_HCMVT|PROTEIN UL136|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 CDCGYSDQC 9
C C Y ++C
Sbjct: 106 CGCHYPEKC 114
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 2 DCG--YSDQCK 10
DCG Y D C+
Sbjct: 1170 DCGTPYFDSCR 1180
>sp|PAP_VZVO|DNA polymerase processivity factor|Varicella-zoster virus (strain Oka
Query: 2 DCGYSDQCK 10
DCG DQ +
Sbjct: 142 DCGPDDQVQ 150
>sp|PAP_VZVD|DNA polymerase processivity factor|Varicella-zoster virus (strain
Query: 2 DCGYSDQCK 10
DCG DQ +
Sbjct: 142 DCGPDDQVQ 150
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 3 CGYSDQC 9
CG+ QC
Sbjct: 1004 CGHMSQC 1010
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 3 CGYSDQC 9
CG+ QC
Sbjct: 1001 CGHMSQC 1007
>sp|NCAP_BUNLC|NUCLEOPROTEIN La Crosse
Query: 2 DCGYSDQC 9
D GY D C
Sbjct: 20 DAGYMDFC 27
>sp|NCAP_BUNL8|NUCLEOPROTEIN La Crosse (isolate Human/United
Query: 2 DCGYSDQC 9
D GY D C
Sbjct: 20 DAGYMDFC 27
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 4 GYSDQC 9
GY +QC
Sbjct: 1179 GYCEQC 1184
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 4 GYSDQC 9
GY +QC
Sbjct: 1179 GYCEQC 1184
>sp|GL_HCMV6|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5040) (HHV-5)
Query: 2 DCGYS 6
DCG+S
Sbjct: 6 DCGFS 10
>sp|GL_HCMVA|ENVELOPE glycoprotein L|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 DCGYS 6
DCG+S
Sbjct: 6 DCGFS 10
>sp|GL_HCMV3|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 2387) (HHV-5)
Query: 2 DCGYS 6
DCG+S
Sbjct: 6 DCGFS 10
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 4 GYSDQCK 10
GY D CK
Sbjct: 448 GYMDFCK 454
>sp|GLYC_PIARV|PRE-GLYCOPROTEIN polyprotein GP complex|Pichinde mammarenavirus (PICV) (Pichind
Query: 1 CDCGY 5
C CGY
Sbjct: 489 CSCGY 493
>sp|VU8_HHV7J|PROTEIN U8|Human herpesvirus 7 (strain JI)
Query: 3 CGYSDQ 8
CG SDQ
Sbjct: 253 CGTSDQ 258
>sp|GL_HCMVM|ENVELOPE glycoprotein L|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 DCGYS 6
DCG+S
Sbjct: 6 DCGFS 10
>sp|GL_HCMV8|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5508) (HHV-5)
Query: 2 DCGYS 6
DCG+S
Sbjct: 6 DCGFS 10
>sp|GL_HCMVP|ENVELOPE glycoprotein L|Human cytomegalovirus (strain PT) (HHV-5)
Query: 2 DCGYS 6
DCG+S
Sbjct: 6 DCGFS 10
>sp|GL_HCMV7|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5160) (HHV-5)
Query: 2 DCGYS 6
DCG+S
Sbjct: 6 DCGFS 10
>sp|GL_HCMV5|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5035) (HHV-5)
Query: 2 DCGYS 6
DCG+S
Sbjct: 6 DCGFS 10
>sp|GL_HCMV1|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 119) (HHV-5)
Query: 2 DCGYS 6
DCG+S
Sbjct: 6 DCGFS 10
>sp|GL_HCMV4|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 4654) (HHV-5)
Query: 2 DCGYS 6
DCG+S
Sbjct: 6 DCGFS 10
>sp|GL_HCMV2|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 1042) (HHV-5)
Query: 2 DCGYS 6
DCG+S
Sbjct: 6 DCGFS 10
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 CGYSD 7
CGY+D
Sbjct: 6212 CGYTD 6216
>sp|ICP22_HHV11|TRANSCRIPTIONAL regulator ICP22|Human herpesvirus 1 (strain 17)
Query: 2 DCGYSDQC 9
D GY QC
Sbjct: 190 DLGYMRQC 197
>sp|ICP27_HHV2H|MRNA export factor|Human herpesvirus 2 (strain HG52)
Query: 3 CGYSDQC 9
CG D C
Sbjct: 408 CGLDDLC 414
96|Sequence|476|485|SDQCKDECCF
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 4 CKDECC 9
C DECC
Sbjct: 1369 CDDECC 1374
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 4 CKDECC 9
C DECC
Sbjct: 1371 CDDECC 1376
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 5 KDECCF 10
K+ECCF
Sbjct: 534 KEECCF 539
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 5 KDECCF 10
K+ECCF
Sbjct: 534 KEECCF 539
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 2 DQCKDECC 9
+QC +CC
Sbjct: 685 EQCYAKCC 692
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 2 DQCKDECC 9
+QC +CC
Sbjct: 685 EQCYAKCC 692
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 2 DQCKDECC 9
+QC +CC
Sbjct: 685 EQCYAKCC 692
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 2 DQCKDECC 9
+QC +CC
Sbjct: 685 EQCYAKCC 692
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 3 QCKDECCF 10
+C D+ CF
Sbjct: 2035 KCMDDICF 2042
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 5 KDECC 9
+DECC
Sbjct: 1368 EDECC 1372
>sp|TEG7_HCMVA|TEGUMENT protein UL51 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 QCKDECCF 10
QC+ +C F
Sbjct: 77 QCQSKCAF 84
>sp|TEG7_HCMVM|TEGUMENT protein UL51 homolog|Human cytomegalovirus (strain Merlin)
Query: 3 QCKDECCF 10
QC+ +C F
Sbjct: 77 QCQSKCAF 84
>sp|HEMA_I06A0|HEMAGGLUTININ A virus (strain A/Russia:St.Petersburg/8/2006
Query: 3 QCKDEC 8
+C DEC
Sbjct: 486 KCNDEC 491
>sp|HEMA_I07A0|HEMAGGLUTININ A virus (strain A/USA:Texas/UR06-0195/2007
Query: 3 QCKDEC 8
+C DEC
Sbjct: 486 KCNDEC 491
>sp|ATI_VAR67|A-TYPE inclusion protein A25 homolog|Variola virus (isolate
Query: 2 DQCKDEC 8
D+C++EC
Sbjct: 412 DKCEEEC 418
>sp|HEMA_I78A3|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 3 QCKDEC 8
+C DEC
Sbjct: 483 KCDDEC 488
>sp|HEMA_I57A0|HEMAGGLUTININ A virus (strain A/Japan/305/1957
Query: 3 QCKDEC 8
+C DEC
Sbjct: 483 KCDDEC 488
>sp|HEMA_I57A5|HEMAGGLUTININ A virus (strain A/Singapore/1/1957
Query: 3 QCKDEC 8
+C DEC
Sbjct: 483 KCDDEC 488
>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 QCKDEC 8
+C DEC
Sbjct: 489 KCDDEC 494
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 2 DQCKDEC 8
+ CKD C
Sbjct: 585 ETCKDTC 591
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 5 KDECC 9
KD CC
Sbjct: 565 KDSCC 569
>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 5 KDECC 9
KD CC
Sbjct: 565 KDSCC 569
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 5 KDECC 9
KD CC
Sbjct: 1425 KDNCC 1429
>sp|HEMA_I80A1|HEMAGGLUTININ A virus (strain A/Duck/Australia/749/1980
Query: 3 QCKDEC 8
+C DEC
Sbjct: 487 KCDDEC 492
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 SDQCKDE 7
+D C+DE
Sbjct: 2364 ADDCQDE 2370
>sp|HEMA_I85A4|HEMAGGLUTININ A virus (strain A/Swine/Netherlands/12/1985
Query: 3 QCKDEC 8
+C DEC
Sbjct: 487 KCDDEC 492
>sp|HEMA_I81A3|HEMAGGLUTININ A virus (strain A/Turkey/Minnesota/1661/1981
Query: 3 QCKDEC 8
+C DEC
Sbjct: 487 KCDDEC 492
>sp|HEMA_I76A4|HEMAGGLUTININ A virus (strain A/Duck/Alberta/35/1976
Query: 3 QCKDEC 8
+C DEC
Sbjct: 487 KCDDEC 492
>sp|RIR1_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus
Query: 4 CKDEC 8
C DEC
Sbjct: 352 CPDEC 356
>sp|RIR1_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus (isolate
Query: 4 CKDEC 8
C DEC
Sbjct: 352 CPDEC 356
>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 CKDEC 8
C DEC
Sbjct: 352 CPDEC 356
>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 4 CKDEC 8
C DEC
Sbjct: 352 CPDEC 356
>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)
Query: 4 CKDEC 8
C DEC
Sbjct: 352 CPDEC 356
>sp|NCAP_SEOUS|NUCLEOPROTEIN virus (strain SR-11) (Sapporo
Query: 2 DQCKDECCF 10
D+C C F
Sbjct: 313 DRCPPTCLF 321
>sp|NCAP_HANTV|NUCLEOPROTEIN virus (strain 76-118) (Korean
Query: 2 DQCKDECCF 10
D+C C F
Sbjct: 313 DRCPPTCLF 321
>sp|NCAP_DOBV|NUCLEOPROTEIN orthohantavirus (DOBV) (Dobrava virus)
Query: 2 DQCKDECCF 10
D+C C F
Sbjct: 313 DRCPPTCLF 321
>sp|V55A_HHV7J|UNCHARACTERIZED protein U55A|Human herpesvirus 7 (strain JI)
Query: 4 CKDEC 8
C DEC
Sbjct: 234 CVDEC 238
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 SDQCKDECCF 10
S C + C F
Sbjct: 331 SKPCSEHCLF 340
97|Sequence|481|490|DECCFDANQP
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 4 CFDANQ 9
CFD+NQ
Sbjct: 1913 CFDSNQ 1918
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 4 CFDANQ 9
CFD+NQ
Sbjct: 1913 CFDSNQ 1918
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 4 CFDANQ 9
CFD+NQ
Sbjct: 1913 CFDSNQ 1918
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 4 CFDANQ 9
CFD+NQ
Sbjct: 1913 CFDSNQ 1918
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 4 CFDANQ 9
CFD+NQ
Sbjct: 1913 CFDSNQ 1918
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 DECCFDANQ 9
+ECCF A+
Sbjct: 535 EECCFYADH 543
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 DECCFDANQ 9
+ECCF A+
Sbjct: 535 EECCFYADH 543
>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 ECCFDANQ 9
ECCF A+
Sbjct: 536 ECCFYADH 543
>sp|PG138_MONPV|25 kDa core protein OPG138|Monkeypox virus (MPXV)
Query: 1 DECCFD 6
D+CC D
Sbjct: 181 DDCCLD 186
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 2 ECCFDANQP 10
E C D +QP
Sbjct: 1391 ETCKDCHQP 1399
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 5 FDANQP 10
FD NQP
Sbjct: 1038 FDPNQP 1043
>sp|VPK2_VAR67|SERINE/THREONINE-PROTEIN kinase 2|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 FDANQP 10
FD+N+P
Sbjct: 316 FDSNEP 321
>sp|VPK2_VACCT|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Tian Tan)
Query: 5 FDANQP 10
FD+N+P
Sbjct: 316 FDSNEP 321
>sp|VPK2_VACCP|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain L-IVP) (VACV)
Query: 5 FDANQP 10
FD+N+P
Sbjct: 283 FDSNEP 288
>sp|VPK2_VACCC|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 FDANQP 10
FD+N+P
Sbjct: 316 FDSNEP 321
>sp|VPK2_VACCA|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Ankara) (VACV)
Query: 5 FDANQP 10
FD+N+P
Sbjct: 316 FDSNEP 321
>sp|VPK2_MONPV|SERINE/THREONINE-PROTEIN kinase 2|Monkeypox virus (MPXV)
Query: 5 FDANQP 10
FD+N+P
Sbjct: 316 FDSNEP 321
>sp|UL05_HCMVA|PROTEIN UL5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DECCFDANQ 9
+ CC+D +
Sbjct: 44 ESCCYDITE 52
>sp|PG138_VACCC|25 kDa core protein OPG138|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DECCFD 6
D+CC D
Sbjct: 183 DDCCLD 188
>sp|UL05_HCMVM|PROTEIN UL5|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DECCFDANQ 9
+ CC+D +
Sbjct: 44 ESCCYDITE 52
>sp|PG138_VACCA|25 kDa core protein OPG138|Vaccinia virus (strain Ankara) (VACV)
Query: 1 DECCFD 6
D+CC D
Sbjct: 178 DDCCLD 183
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 DECCFDAN 8
D CFD N
Sbjct: 342 DPFCFDVN 349
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 DECCFDAN 8
D CFD N
Sbjct: 342 DPFCFDVN 349
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 DECCFDANQP 10
DE C + N P
Sbjct: 5945 DELCVNLNLP 5954
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 1 DECCFDANQ 9
+E C ANQ
Sbjct: 202 EELCVTANQ 210
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 1 DECCFDANQ 9
+E C ANQ
Sbjct: 202 EELCVTANQ 210
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 1 DECCFDANQ 9
+E C ANQ
Sbjct: 206 EELCVTANQ 214
>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 3 CCFDANQP 10
CC N+P
Sbjct: 479 CCRRVNRP 486
>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)
Query: 1 DECCFDANQ 9
+E C ANQ
Sbjct: 201 EELCVTANQ 209
>sp|VIF_HV2D2|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 4 CFDANQ 9
CF AN+
Sbjct: 116 CFSANE 121
>sp|GLYCO_RABVT|GLYCOPROTEIN virus (isolate Human/Algeria/1991) (RABV)
Query: 3 CCFDANQP 10
CC N+P
Sbjct: 479 CCRRVNRP 486
>sp|TR14_HCMVA|PROTEIN TRL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 ECCFDAN 8
+ CFD N
Sbjct: 58 DICFDCN 64
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 DECCFDANQ 9
+E C ANQ
Sbjct: 204 EELCITANQ 212
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 DECCF 5
D CCF
Sbjct: 5814 DYCCF 5818
>sp|PRTP_HHV2|PROCESSING and transport protein|Human herpesvirus 2 (HHV-2) (Human
Query: 1 DECCFDANQ 9
+E C ANQ
Sbjct: 206 EELCVTANQ 214
>sp|PHOSP_VSIVN|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 2 ECCFDANQ 9
EC F+A++
Sbjct: 156 ECTFEASR 163
98|Sequence|486|495|DANQPEGRKC
>sp|NCAP_ISFV|NUCLEOPROTEIN virus (ISFV)
Query: 5 PEGRKC 10
P+GRKC
Sbjct: 119 PDGRKC 124
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 ANQPEGR 8
A QPEGR
Sbjct: 68 ARQPEGR 74
Query: 1 DANQPEGRK 9
+ +QP GR+
Sbjct: 54 ERSQPRGRR 62
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 ANQPEGR 8
A QPEGR
Sbjct: 68 ARQPEGR 74
Query: 1 DANQPEGRK 9
+ +QP GR+
Sbjct: 54 ERSQPRGRR 62
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 1 DANQPEGRKC 10
D+N P G++C
Sbjct: 276 DSNLPIGQQC 285
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 DANQPEGRKC 10
D+N P G++C
Sbjct: 276 DSNLPIGQQC 285
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 ANQPEGR 8
A QPEGR
Sbjct: 68 ARQPEGR 74
Query: 1 DANQPEGRK 9
+ +QP GR+
Sbjct: 54 ERSQPRGRR 62
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 2 ANQPEG 7
ANQPEG
Sbjct: 1267 ANQPEG 1272
>sp|MATRX_MUMPZ|MATRIX protein|Mumps virus genotype N (strain
Query: 3 NQPEGRKC 10
N PEG C
Sbjct: 225 NDPEGEGC 232
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 ANQPEGR 8
A QP+GR
Sbjct: 68 ARQPQGR 74
Query: 1 DANQPEGRK 9
+ +QP GR+
Sbjct: 54 ERSQPRGRR 62
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 ANQPEGR 8
A QP+GR
Sbjct: 68 ARQPQGR 74
Query: 1 DANQPEGRK 9
+ +QP GR+
Sbjct: 54 ERSQPRGRR 62
>sp|CRMB_MONPV|SOLUBLE TNF receptor II|Monkeypox virus (MPXV)
Query: 1 DANQPEGRKC 10
D+NQ E R C
Sbjct: 91 DSNQVETRSC 100
>sp|CRMB_CWPXG|SOLUBLE TNF receptor II|Cowpox virus (strain GRI-90 /
Query: 1 DANQPEGRKC 10
D+NQ E R C
Sbjct: 93 DSNQVETRSC 102
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 DANQPEGRKC 10
DA PE R C
Sbjct: 1025 DATAPEPRGC 1034
>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1
Query: 5 PEGRKC 10
P GRKC
Sbjct: 99 PSGRKC 104
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 DANQPEGRKC 10
DA PE R C
Sbjct: 1025 DATAPEPRGC 1034
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 DANQPEGRKC 10
DA PE R C
Sbjct: 1025 DATAPEPRGC 1034
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 DANQPEGRKC 10
DA PE R C
Sbjct: 1025 DATAPEPRGC 1034
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 DANQPEGRKC 10
DA PE R C
Sbjct: 1025 DATAPEPRGC 1034
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 DANQPEGRKC 10
DA PE R C
Sbjct: 1025 DATAPEPRGC 1034
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 DANQPEGRKC 10
DA PE R C
Sbjct: 1025 DATAPEPRGC 1034
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 ANQPEGR 8
A +PEGR
Sbjct: 68 ARRPEGR 74
Query: 1 DANQPEGRK 9
+ +QP GR+
Sbjct: 54 ERSQPRGRR 62
>sp|CAPSD_HEVCT|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 4
Query: 2 ANQPEGRK 9
A QP GR+
Sbjct: 22 AGQPSGRR 29
>sp|MATRX_VSNJO|MATRIX protein|Vesicular stomatitis New Jersey virus
Query: 1 DANQPE 6
D NQPE
Sbjct: 125 DLNQPE 130
>sp|UNG_HHV6Z|URACIL-DNA glycosylase|Human herpesvirus 6B (strain Z29)
Query: 5 PEGRKC 10
P+GR C
Sbjct: 96 PDGRGC 101
>sp|UNG_HHV6U|URACIL-DNA glycosylase|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 PEGRKC 10
P+GR C
Sbjct: 96 PDGRGC 101
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 ANQPEGR 8
A +PEGR
Sbjct: 68 ARRPEGR 74
Query: 1 DANQPEGRK 9
+ +QP GR+
Sbjct: 54 ERSQPRGRR 62
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 ANQPEGR 8
A +PEGR
Sbjct: 68 ARRPEGR 74
Query: 1 DANQPEGRK 9
+ +QP GR+
Sbjct: 54 ERSQPRGRR 62
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 DANQPEGRK 9
++ +P+GR+
Sbjct: 338 ESTEPDGRR 346
>sp|PG057_VACCP|ENVELOPE phospholipase OPG057|Vaccinia virus (strain L-IVP) (VACV)
Query: 2 ANQPEGRKC 10
A+ P G KC
Sbjct: 5 ASVPAGAKC 13
>sp|PG057_VACCC|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 ANQPEGRKC 10
A+ P G KC
Sbjct: 5 ASVPAGAKC 13
>sp|PG057_MONPV|ENVELOPE phospholipase OPG057|Monkeypox virus (MPXV)
Query: 2 ANQPEGRKC 10
A+ P G KC
Sbjct: 5 ASVPAGAKC 13
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 DANQPEGRK 9
+ +QP GR+
Sbjct: 54 ERSQPRGRR 62
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 DANQPEGRK 9
+ +QP GR+
Sbjct: 54 ERSQPRGRR 62
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 DANQPEGRK 9
+ +QP GR+
Sbjct: 54 ERSQPRGRR 62
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 DANQPEGRK 9
+ +QP GR+
Sbjct: 54 ERSQPRGRR 62
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 DANQPEGRK 9
+ +QP GR+
Sbjct: 54 ERSQPRGRR 62
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 DANQPEGRK 9
+ +QP GR+
Sbjct: 54 ERSQPRGRR 62
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 DANQPEGRK 9
+ +QP GR+
Sbjct: 54 ERSQPRGRR 62
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 DANQPEGRK 9
+ +QP GR+
Sbjct: 54 ERSQPRGRR 62
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 DANQPEGRK 9
+ +QP GR+
Sbjct: 54 ERSQPRGRR 62
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 DANQPEGRK 9
+ +QP GR+
Sbjct: 54 ERSQPRGRR 62
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 DANQPEGRK 9
+ +QP GR+
Sbjct: 54 ERSQPRGRR 62
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 DANQPEGRK 9
+ +QP GR+
Sbjct: 54 ERSQPRGRR 62
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 DANQPEGRK 9
+ +QP GR+
Sbjct: 54 ERSQPRGRR 62
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 DANQPEGRK 9
+ +QP GR+
Sbjct: 54 ERSQPRGRR 62
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 DANQPEGRK 9
+ +QP GR+
Sbjct: 54 ERSQPRGRR 62
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 DANQPEGRK 9
+ +QP GR+
Sbjct: 54 ERSQPRGRR 62
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 DANQPEGRK 9
+ +QP GR+
Sbjct: 54 ERSQPRGRR 62
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 DANQPEGRK 9
+ +QP GR+
Sbjct: 54 ERSQPRGRR 62
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 DANQPEGRK 9
+ +QP GR+
Sbjct: 54 ERSQPRGRR 62
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 DANQPEGRK 9
+ +QP GR+
Sbjct: 54 ERSQPRGRR 62
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 DANQPEGRK 9
+ +QP GR+
Sbjct: 54 ERSQPRGRR 62
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 DANQPEGRK 9
+ +QP GR+
Sbjct: 54 ERSQPRGRR 62
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 DANQPEGRK 9
+ +QP GR+
Sbjct: 54 ERSQPRGRR 62
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 1 DANQPEGRK 9
+ +QP GR+
Sbjct: 54 ERSQPRGRR 62
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 1 DANQPEGRK 9
+ +QP GR+
Sbjct: 54 ERSQPRGRR 62
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 1 DANQPEGRK 9
+ +QP GR+
Sbjct: 54 ERSQPRGRR 62
99|Sequence|491|500|EGRKCKLKPG
>sp|TEG4_HHV11|TEGUMENT protein UL21|Human herpesvirus 1 (strain 17)
Query: 2 GRKCKLKPG 10
GR C +PG
Sbjct: 37 GRPCASQPG 45
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 RKCKLKP 9
+KC LKP
Sbjct: 2082 KKCALKP 2088
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 4 KCKLKPG 10
KC+ KPG
Sbjct: 1514 KCETKPG 1520
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 EGRKCKLKP 9
EG K KL+P
Sbjct: 2059 EGEKKKLRP 2067
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 EGRKCKLKP 9
EG K KL+P
Sbjct: 2059 EGEKKKLRP 2067
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 EGRKCKLKP 9
EG K KL+P
Sbjct: 2059 EGEKKKLRP 2067
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 EGRKCKLKP 9
EG K KL+P
Sbjct: 2059 EGEKKKLRP 2067
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 EGRKCKLKP 9
EG K KL+P
Sbjct: 2059 EGEKKKLRP 2067
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 EGRKCKLKP 9
EG K KL+P
Sbjct: 2059 EGEKKKLRP 2067
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EGRKCKLKP 9
EG + KLKP
Sbjct: 2060 EGERKKLKP 2068
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EGRKCKLKP 9
EG + KLKP
Sbjct: 2060 EGERKKLKP 2068
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 EGRKCKLKP 9
EG K KL+P
Sbjct: 2059 EGEKKKLRP 2067
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 EGRKCKLKP 9
EG K KL+P
Sbjct: 2059 EGEKKKLRP 2067
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EGRKCKLKP 9
EG + KLKP
Sbjct: 2060 EGERKKLKP 2068
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EGRKCKLKP 9
EG + KLKP
Sbjct: 2060 EGERKKLKP 2068
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 EGRKCKLKP 9
EG K KL+P
Sbjct: 2059 EGEKKKLRP 2067
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 EGRKCKLKP 9
EG + KLKP
Sbjct: 2060 EGERKKLKP 2068
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EGRKCKLKP 9
EG + KLKP
Sbjct: 2060 EGERKKLKP 2068
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EGRKCKLKP 9
EG + KLKP
Sbjct: 2060 EGERKKLKP 2068
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EGRKCKLKP 9
EG + KLKP
Sbjct: 1650 EGERKKLKP 1658
>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)
Query: 1 EGRKCKL 7
EG+KC L
Sbjct: 209 EGKKCYL 215
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 5 CKLKPG 10
CK++PG
Sbjct: 959 CKVEPG 964
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 EGRKCKLKP 9
EG + KL+P
Sbjct: 2060 EGERKKLRP 2068
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 EGRKCKLKP 9
EG + KL+P
Sbjct: 2061 EGERKKLRP 2069
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 EGRKCKLKP 9
EG + KL+P
Sbjct: 2061 EGERKKLRP 2069
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 4 KCKLKP 9
+CKL P
Sbjct: 981 RCKLNP 986
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 4 KCKLKP 9
+CKL P
Sbjct: 981 RCKLNP 986
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 EGRKCKLKP 9
EG + KL+P
Sbjct: 2059 EGERKKLRP 2067
>sp|NCAP_ISFV|NUCLEOPROTEIN virus (ISFV)
Query: 1 EGRKC 5
+GRKC
Sbjct: 120 DGRKC 124
>sp|POLG_HCVTH|GENOME polyprotein|Hepatitis C virus (isolate TH)
Query: 1 EGRKCKLKPG 10
+G C + PG
Sbjct: 186 QGCNCSIYPG 195
>sp|POLG_HCVH8|GENOME polyprotein|Hepatitis C virus (isolate HCT18)
Query: 1 EGRKCKLKPG 10
+G C + PG
Sbjct: 186 QGCNCSIYPG 195
>sp|POLG_HCVE0|GENOME polyprotein|Hepatitis C virus (isolate EC10)
Query: 1 EGRKCKLKPG 10
+G C + PG
Sbjct: 3 QGCNCSIYPG 12
100|Sequence|496|505|KLKPGKQCSP
>sp|AN_EBVA8|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 KPGKQCSP 10
KPG+ CSP
Sbjct: 376 KPGRDCSP 383
>sp|AN_EBVG|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 KPGKQCSP 10
KPG+ CSP
Sbjct: 376 KPGRDCSP 383
>sp|AN_EBVB9|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 KPGKQCSP 10
KPG+ CSP
Sbjct: 376 KPGRDCSP 383
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 1 KLKPGKQCSP 10
+LKPG+ +P
Sbjct: 318 RLKPGRGNAP 327
>sp|PG140_VARV|VIRION membrane protein OPG140|Variola virus
Query: 5 GKQCSP 10
GK C+P
Sbjct: 68 GKHCAP 73
>sp|PG140_VAR67|VIRION membrane protein OPG140|Variola virus (isolate
Query: 5 GKQCSP 10
GK C+P
Sbjct: 68 GKHCAP 73
>sp|PG140_VACCC|VIRION membrane protein OPG140|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 GKQCSP 10
GK C+P
Sbjct: 68 GKHCAP 73
>sp|PG140_MONPV|VIRION membrane protein OPG140|Monkeypox virus (MPXV)
Query: 5 GKQCSP 10
GK C+P
Sbjct: 68 GKHCAP 73
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 1 KLKPGKQCSP 10
+LKPG+ +P
Sbjct: 318 RLKPGRGNAP 327
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 LKPGKQCS 9
L PG QC+
Sbjct: 1184 LGPGPQCT 1191
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 LKPGKQCS 9
L PG QC+
Sbjct: 1184 LGPGPQCT 1191
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 LKPGKQC 8
LKP +QC
Sbjct: 1144 LKPYEQC 1150
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 LKPGKQC 8
LKP +QC
Sbjct: 1144 LKPYEQC 1150
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 LKPGKQC 8
LKP +QC
Sbjct: 1145 LKPYEQC 1151
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 LKPGKQC 8
LKP +QC
Sbjct: 1145 LKPYEQC 1151
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 1 KLKPGKQCS 9
KLKPG++ +
Sbjct: 719 KLKPGEKAN 727
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 1 KLKPGKQCS 9
KLKPG++ +
Sbjct: 719 KLKPGEKAN 727
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 1 KLKPGKQCS 9
KLKPG++ +
Sbjct: 719 KLKPGEKAN 727
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 KLKPGK 6
KLKPGK
Sbjct: 622 KLKPGK 627
>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)
Query: 4 PGKQCS 9
PG++CS
Sbjct: 174 PGRKCS 179
>sp|GLYCO_RABVR|GLYCOPROTEIN virus (strain China/MRV) (RABV)
Query: 4 PGKQCS 9
PG++CS
Sbjct: 174 PGRKCS 179
>sp|PG128_VACCC|PROTEIN OPG128|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 LKPGKQCS 9
L P K+CS
Sbjct: 11 LNPPKRCS 18
>sp|PG128_MONPV|PROTEIN OPG128|Monkeypox virus (MPXV)
Query: 2 LKPGKQCS 9
L P K+CS
Sbjct: 11 LNPPKRCS 18
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 1 KLKPGKQC 8
++ PG++C
Sbjct: 846 EIAPGEEC 853
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 1 KLKPGKQC 8
++ PG++C
Sbjct: 846 EIAPGEEC 853
101|Sequence|501|510|KQCSPSQGPC
>sp|VE2_HPV34|REGULATORY protein E2|Human papillomavirus type 34
Query: 1 KQCSPSQGP 9
+QC P +GP
Sbjct: 235 RQCDPDEGP 243
>sp|E1BS_ADE41|E1B protein, small T-antigen|Human adenovirus F serotype 41
Query: 3 CSPSQGP 9
CSP+Q P
Sbjct: 135 CSPAQPP 141
>sp|UL13_VZVO|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 QCSPSQGP 9
Q SP+ GP
Sbjct: 11 QISPTAGP 18
>sp|UL13_VZVD|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 QCSPSQGP 9
Q SP+ GP
Sbjct: 11 QISPTAGP 18
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 KQCSPSQGP 9
K +PS+GP
Sbjct: 6578 KGLTPSKGP 6586
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 KQCSPSQG 8
+ C PS+G
Sbjct: 1747 ENCRPSEG 1754
>sp|CVC2_HCMVM|CAPSID vertex component 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 KQCSPSQGP 9
+QC +GP
Sbjct: 92 QQCELDEGP 100
>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 KQCSPSQGP 9
+QC +GP
Sbjct: 92 QQCELDEGP 100
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 1 KQCSPSQGP 9
+Q +PSQ P
Sbjct: 20 RQPTPSQSP 28
>sp|SCAF_EBVB9|CAPSID scaffolding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 PSQGPC 10
P QGPC
Sbjct: 473 PQQGPC 478
>sp|BRRF1_EBVG|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 PSQGPC 10
PS+ PC
Sbjct: 195 PSEEPC 200
>sp|BRRF1_EBVB9|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 PSQGPC 10
PS+ PC
Sbjct: 195 PSEEPC 200
>sp|BRRF1_EBVA8|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 PSQGPC 10
PS+ PC
Sbjct: 195 PSEEPC 200
>sp|SCAF_EBVA8|CAPSID scaffolding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 PSQGPC 10
P QGPC
Sbjct: 473 PQQGPC 478
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 CSPSQG 8
CSP QG
Sbjct: 1482 CSPPQG 1487
>sp|SCAF_EBVG|CAPSID scaffolding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 PSQGPC 10
P QGPC
Sbjct: 473 PQQGPC 478
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 KQCSPSQG 8
+ C PS+G
Sbjct: 1747 ENCRPSKG 1754
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 1 KQCSPSQGP 9
+QCS + GP
Sbjct: 597 QQCSMAAGP 605
>sp|GLYCO_ABLVB|GLYCOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 KQCSPSQ 7
K CSP+Q
Sbjct: 269 KWCSPNQ 275
>sp|GLYCO_ABLVH|GLYCOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 1 KQCSPSQ 7
K CSP Q
Sbjct: 269 KWCSPDQ 275
>sp|VSGP_EBOEC|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 1 KQCSPSQGP 9
++ P+QGP
Sbjct: 324 RELLPTQGP 332
>sp|VSGP_EBOZM|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 KQCSPSQGP 9
++ P+QGP
Sbjct: 324 RELLPTQGP 332
>sp|VSGP_EBOZ5|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 KQCSPSQGP 9
++ P+QGP
Sbjct: 324 RELLPTQGP 332
102|Sequence|506|515|SQGPCCTAQC
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 1 SQGPCCTA 8
S+G CCTA
Sbjct: 821 SRGRCCTA 828
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 1 SQGPCCTA 8
S+G CCTA
Sbjct: 821 SRGRCCTA 828
>sp|PAX_I97A1|PROTEIN PA-X|Influenza A virus (strain A/Hong
Query: 1 SQGPC 5
SQGPC
Sbjct: 207 SQGPC 211
>sp|PAX_I97A0|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong
Query: 1 SQGPC 5
SQGPC
Sbjct: 207 SQGPC 211
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 SQGPCCT 7
S+G CCT
Sbjct: 841 SRGSCCT 847
>sp|NSS_RVFVZ|NON-STRUCTURAL protein S|Rift valley fever virus (strain
Query: 3 GPCC 6
GPCC
Sbjct: 37 GPCC 40
>sp|AN_HHV2|ALKALINE nuclease|Human herpesvirus 2 (HHV-2) (Human
Query: 1 SQGPCCTAQ 9
+QGPC ++Q
Sbjct: 238 AQGPCFSSQ 246
>sp|UL32_EBVB9|PACKAGING protein UL32 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SQGPCCTA 8
SQGPC A
Sbjct: 335 SQGPCLLA 342
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 PCCTA 8
PCCT+
Sbjct: 4269 PCCTS 4273
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 SQGPCCTAQC 10
S+G C T C
Sbjct: 1332 SKGVCATGDC 1341
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 SQGPCCTAQC 10
S+G C T C
Sbjct: 1332 SKGVCATGDC 1341
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 2 QGPCCTAQ 9
QGP T+Q
Sbjct: 224 QGPLATSQ 231
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 2 QGPCCTAQ 9
QGP T+Q
Sbjct: 231 QGPLATSQ 238
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 2 QGPCCTAQ 9
QGP T+Q
Sbjct: 231 QGPLATSQ 238
>sp|UL32_HHV6Z|PACKAGING protein UL32 homolog|Human herpesvirus 6B (strain Z29)
Query: 4 PCCTAQC 10
P C A C
Sbjct: 388 PLCLANC 394
>sp|UL32_HHV6U|PACKAGING protein UL32|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 PCCTAQC 10
P C A C
Sbjct: 388 PLCLANC 394
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 6 CTAQC 10
CTA+C
Sbjct: 1822 CTAEC 1826
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 QGPCCTA 8
G CC A
Sbjct: 861 HGACCVA 867
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 QGPCCTA 8
G CC A
Sbjct: 861 HGACCVA 867
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 QGPCCTA 8
G CC A
Sbjct: 861 HGACCVA 867
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 QGPCCTAQ 9
G CCT +
Sbjct: 5020 HGTCCTTR 5027
>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P
Query: 1 SQGPC 5
SQGPC
Sbjct: 274 SQGPC 278
>sp|SCAF_EBVB9|CAPSID scaffolding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 QGPCCT 7
QGPC T
Sbjct: 475 QGPCYT 480
>sp|SCAF_EBVA8|CAPSID scaffolding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 QGPCCT 7
QGPC T
Sbjct: 475 QGPCYT 480
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 2 QGPCCTAQ 9
QGP T+Q
Sbjct: 231 QGPLATSQ 238
>sp|SCAF_EBVG|CAPSID scaffolding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 QGPCCT 7
QGPC T
Sbjct: 475 QGPCYT 480
103|Sequence|511|520|CTAQCAFKSK
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 1 CTAQCAFKSK 10
CT+ C F+ K
Sbjct: 1030 CTSSCEFERK 1039
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 CTAQCAFK 8
CTA+C ++
Sbjct: 1822 CTAECIYE 1829
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 TAQCAFKS 9
TA C FK+
Sbjct: 2687 TATCVFKA 2694
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 CTAQCA 6
CTA CA
Sbjct: 1968 CTAPCA 1973
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 TAQCAFK 8
TA C FK
Sbjct: 2688 TATCVFK 2694
>sp|VL1_HPV55|MAJOR capsid protein L1|Human papillomavirus type 55
Query: 1 CTAQCAF 7
CTA C +
Sbjct: 222 CTATCKY 228
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 TAQCAFK 8
TA C FK
Sbjct: 2688 TAACVFK 2694
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 TAQCAFK 8
TA C FK
Sbjct: 2688 TAACVFK 2694
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 2 TAQCAFK 8
TA C FK
Sbjct: 2688 TAACVFK 2694
>sp|VL1_HPV44|MAJOR capsid protein L1|Human papillomavirus 44
Query: 1 CTAQCAF 7
CTA C +
Sbjct: 222 CTATCKY 228
>sp|NSP3_ROTHC|NON-STRUCTURAL protein 3|Rotavirus C (isolate RVC/Human/United
Query: 1 CTAQCAFK 8
C A C FK
Sbjct: 280 CHAICIFK 287
>sp|VE6_HPV49|PROTEIN E6|Human papillomavirus type 49
Query: 1 CTAQCAFKS 9
C A CA++S
Sbjct: 57 CCAACAYRS 65
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 CTAQCAF 7
CT CAF
Sbjct: 866 CTTSCAF 872
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 CTAQCA 6
CT CA
Sbjct: 2217 CTTHCA 2222
>sp|AN_HHV6Z|ALKALINE nuclease|Human herpesvirus 6B (strain Z29)
Query: 1 CTAQCAFKSK 10
C A C F +K
Sbjct: 108 CRAPCVFVNK 117
104|Sequence|516|525|AFKSKSEKCR
>sp|GLYCP_HENDH|GLYCOPROTEIN G|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 4 SKSEKCR 10
SK+E CR
Sbjct: 390 SKAENCR 396
>sp|PG138_VACCC|25 kDa core protein OPG138|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 KSKSEKC 9
KSKS KC
Sbjct: 61 KSKSSKC 67
>sp|U9_HHV6U|PROTEIN U9|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 KSKSEKCR 10
KSKSE+C
Sbjct: 16 KSKSEECN 23
>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)
Query: 4 SKSEKC 9
SKS+KC
Sbjct: 106 SKSQKC 111
>sp|VU9_HHV6Z|PROTEIN U9|Human herpesvirus 6B (strain Z29)
Query: 3 KSKSEKCR 10
KSKSE+C
Sbjct: 16 KSKSEECN 23
>sp|VU9_HHV6H|PROTEIN U9|Human herpesvirus 6B (HHV-6 variant
Query: 3 KSKSEKCR 10
KSKSE+C
Sbjct: 16 KSKSEECN 23
>sp|PG138_VARV|25 kDa core protein OPG138|Variola virus
Query: 3 KSKSEKC 9
KSKS KC
Sbjct: 61 KSKSSKC 67
>sp|PG138_VAR67|25 kDa core protein OPG138|Variola virus (isolate
Query: 3 KSKSEKC 9
KSKS KC
Sbjct: 61 KSKSSKC 67
>sp|PG138_MONPV|25 kDa core protein OPG138|Monkeypox virus (MPXV)
Query: 3 KSKSEKC 9
KSKS KC
Sbjct: 61 KSKSSKC 67
105|Sequence|521|530|SEKCRDDSDC
>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 SEKCRDDSD 9
++ CR+DSD
Sbjct: 295 TQLCRNDSD 303
>sp|UL56_HHV2H|PROTEIN UL56|Human herpesvirus 2 (strain HG52)
Query: 1 SEKCRDDSD 9
+ CRDD D
Sbjct: 8 AHACRDDGD 16
>sp|VIRF2_HHV8P|VIRAL IRF2-like protein|Human herpesvirus 8 type P
Query: 4 CRDDSD 9
CRDD D
Sbjct: 462 CRDDRD 467
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SEKCRDDSDC 10
+EKC + SDC
Sbjct: 905 NEKCTNISDC 914
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 SEKCRDDSDC 10
S KC D+DC
Sbjct: 1044 SFKCCHDTDC 1053
>sp|US14_HCMVM|MEMBRANE protein US14|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 KCRDD 7
+CRDD
Sbjct: 96 ECRDD 100
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 3 KCRDDSDC 10
KC D+DC
Sbjct: 1047 KCCHDTDC 1054
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 3 KCRDDSDC 10
KC D+DC
Sbjct: 1047 KCCHDTDC 1054
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 KCRDD 7
KCRD+
Sbjct: 228 KCRDE 232
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 EKCRDDSD 9
+ CRDD +
Sbjct: 43 DDCRDDEE 50
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 EKCRDDSD 9
+ CRDD +
Sbjct: 43 DDCRDDEE 50
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 SEKCRDDSD 9
+EK DD D
Sbjct: 649 TEKANDDLD 657
106|Sequence|526|535|DDSDCAREGI
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 2 DSDCAREGI 10
D+DC+ EG+
Sbjct: 1050 DTDCSSEGL 1058
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 2 DSDCAREGI 10
D+DC EG+
Sbjct: 1051 DTDCTEEGL 1059
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 DSDCAREGI 10
D+DC EG+
Sbjct: 1051 DTDCTEEGL 1059
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 DDSDC 5
DDSDC
Sbjct: 6008 DDSDC 6012
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 DDSDCA 6
DDS+CA
Sbjct: 1987 DDSNCA 1992
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 4 DCARE 8
DCARE
Sbjct: 608 DCARE 612
>sp|ORF0_VZVD|MEMBRANE protein 0|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 DCAREGI 10
DCA +GI
Sbjct: 76 DCAYDGI 82
>sp|IORF_CVHN1|PROTEIN I|Human coronavirus HKU1 (isolate N1)
Query: 1 DDSDCAREGI 10
+ S C R+GI
Sbjct: 107 NKSSCYRDGI 116
>sp|ORF0_VZVO|MEMBRANE protein 0|Varicella-zoster virus (strain Oka vaccine)
Query: 4 DCAREGI 10
DCA +GI
Sbjct: 76 DCAYDGI 82
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 CAREGI 10
C REGI
Sbjct: 296 CIREGI 301
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 SDCAREG 9
S+C +EG
Sbjct: 396 SNCGKEG 402
>sp|YM2_DHVI1|PUTATIVE uncharacterized protein M2|Dhori virus (strain Indian/1313/61)
Query: 4 DCAREG 9
DC REG
Sbjct: 30 DCGREG 35
>sp|GAG_HV1V9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 SDCAREG 9
S+C +EG
Sbjct: 396 SNCGKEG 402
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 1 DDSDCAREGI 10
DD D EGI
Sbjct: 618 DDEDADTEGI 627
>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain
Query: 2 DSDCAREGI 10
DSD +++GI
Sbjct: 54 DSDDSQQGI 62
>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)
Query: 2 DSDCAREGI 10
DSD +++GI
Sbjct: 54 DSDDSQQGI 62
>sp|SCAF_HHV6Z|CAPSID scaffolding protein|Human herpesvirus 6B (strain Z29)
Query: 1 DDSDCARE 8
DD + ARE
Sbjct: 427 DDKEMARE 434
>sp|SCAF_HHV6U|CAPSID scaffolding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 DDSDCARE 8
DD + ARE
Sbjct: 427 DDKEMARE 434
107|Sequence|531|540|AREGICNGFT
>sp|NSP3_ROTJ1|NON-STRUCTURAL protein 3|Rotavirus X (strain
Query: 3 EGICNGFT 10
EG C G+T
Sbjct: 81 EGFCQGYT 88
>sp|NSP3_ROTB2|NON-STRUCTURAL protein 3|Rotavirus X (isolate
Query: 3 EGICNGFT 10
EG C G+T
Sbjct: 81 EGFCQGYT 88
>sp|VP4_ROTGA|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 2 REGICNGF 9
R+G C GF
Sbjct: 435 RQGCCAGF 442
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 2 REGICNGF 9
R+G C GF
Sbjct: 436 RQGACAGF 443
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 2 REGICNGF 9
++ +CNGF
Sbjct: 807 KQYVCNGF 814
>sp|NSP1A_ROTGI|NON-STRUCTURAL protein 1, peptide 1|Rotavirus B (isolate RVB/Rat/United
Query: 1 AREGICN 7
ARE IC+
Sbjct: 107 ARESICS 113
>sp|NRAM_I06A0|NEURAMINIDASE A virus (strain A/Russia:St.Petersburg/8/2006
Query: 2 REGICNGFT 10
REG CN T
Sbjct: 331 REGSCNPVT 339
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 AREGICNGFT 10
AR G NG T
Sbjct: 2504 ARRGTANGKT 2513
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 AREGICNGF 9
+ +G+C GF
Sbjct: 2677 SHKGVCFGF 2685
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 AREGICNGF 9
+ +G+C GF
Sbjct: 2677 SHKGVCFGF 2685
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 4 GICNGF 9
G+C GF
Sbjct: 290 GLCQGF 295
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 6 CNGFT 10
CNG+T
Sbjct: 210 CNGYT 214
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 2 REGICNGF 9
REG+ GF
Sbjct: 866 REGLPEGF 873
>sp|US27_HCMVM|ENVELOPE glycoprotein US27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 AREGICNGF 9
+RE +C+G
Sbjct: 100 SREVVCSGL 108
>sp|US27_HCMVA|G-PROTEIN coupled receptor homolog US27|Human cytomegalovirus (strain AD169)
Query: 1 AREGICNGF 9
+RE +C+G
Sbjct: 98 SREVVCSGL 106
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 AREGICNGF 9
A CNGF
Sbjct: 761 ASAASCNGF 769
>sp|HBSAG_HBVE4|LARGE envelope protein|Hepatitis B virus genotype E
Query: 3 EGICNGF 9
EGI +GF
Sbjct: 175 EGITSGF 181
>sp|HBSAG_HBVE2|LARGE envelope protein|Hepatitis B virus genotype E
Query: 3 EGICNGF 9
EGI +GF
Sbjct: 175 EGITSGF 181
>sp|E1A_ADE07|EARLY E1A protein|Human adenovirus B serotype 7
Query: 3 EGICNGF 9
EG NGF
Sbjct: 61 EGAVNGF 67
>sp|GAG_SFV3L|GAG polyprotein|Simian foamy virus type 3
Query: 2 REGICNGF 9
+EG+ GF
Sbjct: 383 QEGVATGF 390
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 EGICN 7
+GICN
Sbjct: 2026 DGICN 2030
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 GICNGF 9
G+C GF
Sbjct: 2706 GVCFGF 2711
108|Sequence|536|545|CNGFTALCPA
>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 NGFTALCP 9
NGFT LCP
Sbjct: 260 NGFTVLCP 267
>sp|PP65_HCMVM|65 kDa phosphoprotein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 NGFTALCP 9
NGFT LCP
Sbjct: 270 NGFTVLCP 277
>sp|PP65_HCMVA|65 kDa phosphoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 NGFTALCP 9
NGFT LCP
Sbjct: 270 NGFTVLCP 277
>sp|VE2_HPV70|REGULATORY protein E2|Human papillomavirus type 70
Query: 1 CNGFTALCP 9
CNG CP
Sbjct: 194 CNGNIIHCP 202
>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1
Query: 3 GFTALC 8
GF ALC
Sbjct: 553 GFRALC 558
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 3 GFTALCP 9
GF + CP
Sbjct: 552 GFVSACP 558
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 4 FTALCP 9
FT +CP
Sbjct: 1402 FTNICP 1407
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 NGFTAL 7
NGF+AL
Sbjct: 757 NGFSAL 762
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 NGFTAL 7
NGF+AL
Sbjct: 749 NGFSAL 754
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 NGFTAL 7
NGF+AL
Sbjct: 747 NGFSAL 752
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 NGFTAL 7
NGF+AL
Sbjct: 753 NGFSAL 758
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 NGFTAL 7
NGF+AL
Sbjct: 747 NGFSAL 752
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 NGFTAL 7
NGFTA+
Sbjct: 3201 NGFTAM 3206
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 NGFTAL 7
NGFTA+
Sbjct: 3201 NGFTAM 3206
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 FTALCPA 10
FTALC +
Sbjct: 525 FTALCTS 531
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 FTALCPA 10
FTALC +
Sbjct: 525 FTALCTS 531
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 FTALCPA 10
FTALC +
Sbjct: 525 FTALCTS 531
>sp|HEMA_I34A1|HEMAGGLUTININ A virus (strain A/Puerto
Query: 2 NGFTALC 8
NG TA C
Sbjct: 146 NGVTAAC 152
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 GFTALC 8
G+TA+C
Sbjct: 1124 GYTAVC 1129
109|Sequence|541|550|ALCPASDPKP
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 ALCPASDPK 9
+L PASDP+
Sbjct: 427 SLSPASDPR 435
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 ALCPASDPK 9
+L PASDP+
Sbjct: 427 SLSPASDPR 435
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 ALCPASDPK 9
+L PASDP+
Sbjct: 426 SLSPASDPR 434
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 ALCPASDPK 9
+L PASDP+
Sbjct: 426 SLSPASDPR 434
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 ALCPASDPK 9
+L PASDP+
Sbjct: 426 SLSPASDPR 434
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 2 LCPASDP 8
CP +DP
Sbjct: 473 FCPCADP 479
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 ALCPASDPK 9
+L PA+DP+
Sbjct: 426 SLSPAADPR 434
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 2 LCPASDP 8
CP +DP
Sbjct: 473 FCPCADP 479
>sp|UL145_HCMVM|PROTEIN UL145|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PASDPK 9
P SDPK
Sbjct: 110 PTSDPK 115
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 ALCPASDP 8
A CPA DP
Sbjct: 1001 ASCPAGDP 1008
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 ALCPASDP 8
A CPA DP
Sbjct: 1001 ASCPAGDP 1008
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 ALCPASDP 8
A CPA DP
Sbjct: 1001 ASCPAGDP 1008
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 ALCPASDP 8
A CPA DP
Sbjct: 1001 ASCPAGDP 1008
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 ALCPASDP 8
A CPA DP
Sbjct: 1001 ASCPAGDP 1008
>sp|VB20_VACCC|PROTEIN B20|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 LCPASDP 8
LC SDP
Sbjct: 27 LCKISDP 33
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 ALCPASDP 8
A CPA DP
Sbjct: 1001 ASCPADDP 1008
>sp|PHOSP_CHAV|PHOSPHOPROTEIN virus (strain I653514) (CHPV)
Query: 4 PASDPKP 10
PASDP P
Sbjct: 175 PASDPIP 181
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 CPASDP 8
CP +DP
Sbjct: 552 CPPADP 557
>sp|VU2_HHV6Z|PROTEIN U2|Human herpesvirus 6B (strain Z29)
Query: 1 ALCPAS 6
ALCP+S
Sbjct: 19 ALCPSS 24
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 1 ALCPASDP 8
AL P +DP
Sbjct: 793 ALAPCNDP 800
110|Sequence|546|555|SDPKPNFTDC
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 5 PNFTDC 10
PN TDC
Sbjct: 1825 PNLTDC 1830
>sp|AN_HHV6U|ALKALINE nuclease|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PKPNFTDC 10
P P FT C
Sbjct: 440 PNPEFTCC 447
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 5 PNFTD 9
PNFTD
Sbjct: 1212 PNFTD 1216
>sp|SCAF_HHV7J|CAPSID scaffolding protein|Human herpesvirus 7 (strain JI)
Query: 1 SDPKPNFTDC 10
S P P F++C
Sbjct: 293 SLPAPQFSEC 302
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 5 PNFTD 9
PNFTD
Sbjct: 1212 PNFTD 1216
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 3 PKPNFTD 9
P+P F D
Sbjct: 950 PRPGFLD 956
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 SDPKPNFT 8
+D PNFT
Sbjct: 1261 TDNGPNFT 1268
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 SDPKPNFT 8
+D PNFT
Sbjct: 1268 TDNGPNFT 1275
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 SDPKPNFT 8
+D PNFT
Sbjct: 1263 TDNGPNFT 1270
>sp|UL24_EBVB9|PROTEIN UL24 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PKPNFTD 9
P P FTD
Sbjct: 57 PGPTFTD 63
>sp|SPIK1_ADE41|FIBER protein 1|Human adenovirus F serotype 41
Query: 1 SDPKPNFT 8
+DP PN T
Sbjct: 392 ADPSPNAT 399
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SDPKPNFT 8
+D PNFT
Sbjct: 1284 TDNGPNFT 1291
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 PKPNFT 8
P+PN+T
Sbjct: 2075 PEPNYT 2080
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SDPKPNFT 8
+D PNFT
Sbjct: 1285 TDNGPNFT 1292
>sp|SPIK1_ADE40|FIBER protein 1|Human adenovirus F serotype 40
Query: 1 SDPKPNFT 8
+DP PN T
Sbjct: 377 ADPSPNAT 384
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 PKPNFT 8
P PN+T
Sbjct: 2080 PSPNYT 2085
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 PKPNFT 8
P PN+T
Sbjct: 2074 PAPNYT 2079
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 PKPNFT 8
P PN+T
Sbjct: 2074 PAPNYT 2079
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 PKPNFT 8
P PN+T
Sbjct: 2074 PAPNYT 2079
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 5 PNFTD 9
PN+TD
Sbjct: 901 PNYTD 905
>sp|HN_PIV5D|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI+)
Query: 3 PKPNFTDC 10
P+P DC
Sbjct: 441 PRPGTGDC 448
>sp|HN_PIV5C|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI-)
Query: 3 PKPNFTDC 10
P+P DC
Sbjct: 441 PRPGTGDC 448
>sp|HN_PIV5|HEMAGGLUTININ-NEURAMINIDASE virus 5 (strain W3)
Query: 3 PKPNFTDC 10
P+P DC
Sbjct: 441 PRPGTGDC 448
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 PKPNFT 8
P PN+T
Sbjct: 2074 PAPNYT 2079
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 1 SDPKPNFTDC 10
S PN+ DC
Sbjct: 676 SSLHPNWRDC 685
>sp|HN_PIV5L|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Human/LN)
Query: 3 PKPNFTDC 10
P+P DC
Sbjct: 441 PRPGTGDC 448
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 PKPNFTD 9
PKP F D
Sbjct: 2141 PKPFFRD 2147
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 5 PNFTD 9
PN+TD
Sbjct: 901 PNYTD 905
>sp|PG036_VACCC|PROTEIN OPG036|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SDPKPNFTDC 10
S PN DC
Sbjct: 27 SSMDPNIMDC 36
>sp|VL1_HPV61|MAJOR capsid protein L1|Human papillomavirus type 61
Query: 1 SDPKPNFTDC 10
++P P TDC
Sbjct: 177 ANPAPRPTDC 186
>sp|GH_HHV7J|ENVELOPE glycoprotein H|Human herpesvirus 7 (strain JI)
Query: 2 DPKPNFTDC 10
DP NF D
Sbjct: 628 DPDTNFIDV 636
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 PKPNFT 8
P PN+T
Sbjct: 2080 PPPNYT 2085
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 PKPNFTD 9
PKP F D
Sbjct: 2141 PKPFFRD 2147
111|Sequence|551|560|NFTDCNRHTQ
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 5 CNRHTQ 10
CN HTQ
Sbjct: 177 CNAHTQ 182
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 5 CNRHTQ 10
CN HTQ
Sbjct: 177 CNAHTQ 182
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 4 DCNRHT 9
DCNR+T
Sbjct: 585 DCNRYT 590
>sp|CAPSD_HEVME|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 2
Query: 1 NFTDCNRHTQ 10
N T CN +T+
Sbjct: 310 NLTTCNTNTR 319
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 FTDCNRHT 9
F DC+R T
Sbjct: 5916 FKDCSRET 5923
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 NFTDCNRHTQ 10
N TDC +T+
Sbjct: 1826 NLTDCTLNTK 1835
>sp|VL1_HPV1|MAJOR capsid protein L1|Human papillomavirus type 1 (Human
Query: 1 NFTDCNRHTQ 10
NF D RHT+
Sbjct: 365 NFNDFLRHTE 374
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 3 TDCNRHTQ 10
T C HTQ
Sbjct: 1095 TQCELHTQ 1102
>sp|GC_HHV2H|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain HG52)
Query: 5 CNRH 8
CNRH
Sbjct: 96 CNRH 99
>sp|GC_HHV2G|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain G)
Query: 5 CNRH 8
CNRH
Sbjct: 95 CNRH 98
>sp|GC_HHV23|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain 333)
Query: 5 CNRH 8
CNRH
Sbjct: 96 CNRH 99
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 NFTDCNRHTQ 10
N TDC +T+
Sbjct: 1826 NLTDCTLNTK 1835
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 NFTDC 5
NF+DC
Sbjct: 681 NFSDC 685
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 NFTDC 5
NF+DC
Sbjct: 681 NFSDC 685
>sp|HEPA_HHV6Z|DNA helicase/primase complex-associated protein|Human herpesvirus 6B
Query: 4 DCNRHT 9
DC+R+T
Sbjct: 588 DCSRYT 593
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 2 FTDCNRHTQ 10
F D HTQ
Sbjct: 447 FQDAESHTQ 455
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 2 FTDCNRHTQ 10
F D HTQ
Sbjct: 447 FQDAESHTQ 455
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 1 NFTDCNRHT 9
+ DCN H+
Sbjct: 1877 SLKDCNDHS 1885
>sp|SPI2_MONPV|SERINE proteinase inhibitor 2|Monkeypox virus (MPXV)
Query: 1 NFTDC 5
+FTDC
Sbjct: 92 DFTDC 96
>sp|NEC1_EBVB9|NUCLEAR egress protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 CNRHTQ 10
C+RHT+
Sbjct: 69 CSRHTR 74
>sp|NEC1_EBVA8|NUCLEAR egress protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 CNRHTQ 10
C+RHT+
Sbjct: 69 CSRHTR 74
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 1 NFTDCNRHT 9
+ DCN H+
Sbjct: 1877 SLKDCNDHS 1885
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 1 NFTDCNRHT 9
+ DCN H+
Sbjct: 1877 SLKDCNDHS 1885
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 4 DCNRHTQ 10
D N HTQ
Sbjct: 562 DTNLHTQ 568
>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A
Query: 4 DCNRHT 9
DC+R+T
Sbjct: 588 DCSRYT 593
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 NFTDCNRHT 9
N TDC +T
Sbjct: 1826 NLTDCTINT 1834
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 5 CNRHT 9
CNR+T
Sbjct: 6222 CNRYT 6226
112|Sequence|556|565|NRHTQVCING
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 3 HTQVCING 10
H Q CING
Sbjct: 564 HRQSCING 571
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 1 NRHTQVCING 10
+RH +VCI G
Sbjct: 826 SRHVKVCIIG 835
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 1 NRHTQVCING 10
+RH +VCI G
Sbjct: 825 SRHVKVCIIG 834
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 1 NRHTQVCING 10
+RH +VCI G
Sbjct: 826 SRHVKVCIIG 835
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 TQVCING 10
T VCING
Sbjct: 781 TPVCING 787
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 TQVCING 10
T VCING
Sbjct: 781 TPVCING 787
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 2 RHTQVCING 10
RH +VCI G
Sbjct: 827 RHVKVCIIG 835
>sp|PG036_VACCC|PROTEIN OPG036|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 NRHTQVCI 8
NRH +CI
Sbjct: 38 NRHINMCI 45
>sp|CEP1_EBVG|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 NRHTQVCI 8
NRH +C+
Sbjct: 33 NRHNAICV 40
>sp|CEP1_EBVB9|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 NRHTQVCI 8
NRH +C+
Sbjct: 33 NRHNAICV 40
>sp|CEP1_EBVA8|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 NRHTQVCI 8
NRH +C+
Sbjct: 33 NRHNAICV 40
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 2 RHTQVCING 10
RH ++CI G
Sbjct: 826 RHAKICIIG 834
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 2 RHTQVCING 10
RH ++CI G
Sbjct: 825 RHAKICIIG 833
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 2 RHTQVCING 10
RH ++CI G
Sbjct: 825 RHAKICIIG 833
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 2 RHTQVCING 10
RH ++CI G
Sbjct: 825 RHAKICIIG 833
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 TQVCING 10
T VC+NG
Sbjct: 781 TPVCVNG 787
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 TQVCING 10
T VC+NG
Sbjct: 781 TPVCVNG 787
>sp|DUT_HCMVM|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain
Query: 3 HTQVCIN 9
HT VCI+
Sbjct: 291 HTTVCIS 297
>sp|DUT_HCMVA|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain
Query: 3 HTQVCIN 9
HT VCI+
Sbjct: 291 HTTVCIS 297
>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 HTQVCING 10
HT V +NG
Sbjct: 314 HTTVSVNG 321
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 RHTQVC 7
RHT++C
Sbjct: 707 RHTRLC 712
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RHTQVC 7
RHT++C
Sbjct: 707 RHTRLC 712
>sp|VP2_ROTHP|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 NRHTQVCING 10
NR QV I+G
Sbjct: 494 NRFRQVVIDG 503
>sp|VP2_ROTHK|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 NRHTQVCING 10
NR QV I+G
Sbjct: 490 NRFRQVVIDG 499
>sp|VP2_ROTHW|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 NRHTQVCING 10
NR QV I+G
Sbjct: 488 NRFRQVVIDG 497
>sp|VP2_ROTHT|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 NRHTQVCING 10
NR QV I+G
Sbjct: 488 NRFRQVVIDG 497
>sp|VP2_ROTAD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 1 NRHTQVCING 10
NR QV I+G
Sbjct: 488 NRFRQVVIDG 497
>sp|VP4_ROTH6|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 NRHTQVCING 10
N HT +NG
Sbjct: 313 NAHTTCSVNG 322
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 NRHTQVCIN 9
N+H C+N
Sbjct: 2173 NKHNFFCVN 2181
>sp|VP2_ROTWI|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 1 NRHTQVCING 10
NR QV I+G
Sbjct: 488 NRFRQVVIDG 497
>sp|VP2_ROTYO|INNER capsid protein VP2|Rotavirus A (strain
Query: 1 NRHTQVCING 10
NR QV I+G
Sbjct: 488 NRFRQVVIDG 497
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 NRHTQVCI 8
N +TQ CI
Sbjct: 2664 NNNTQFCI 2671
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 NRHTQVCI 8
N +TQ CI
Sbjct: 2664 NNNTQFCI 2671
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 NRHTQVCI 8
N +TQ CI
Sbjct: 2664 NNNTQFCI 2671
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 NRHTQVCI 8
N +TQ CI
Sbjct: 2664 NNNTQFCI 2671
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 NRHTQVCI 8
N +TQ CI
Sbjct: 2664 NNNTQFCI 2671
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 NRHTQVCIN 9
N+H C+N
Sbjct: 2173 NKHNFFCVN 2181
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 NRHTQVC 7
N HT VC
Sbjct: 1560 NLHTTVC 1566
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 NRHTQVC 7
N HT VC
Sbjct: 1560 NLHTTVC 1566
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 NRHTQVC 7
N HT VC
Sbjct: 1560 NLHTTVC 1566
>sp|PG036_VARV|PROTEIN OPG036|Variola virus
Query: 1 NRHTQVCI 8
NRH +C+
Sbjct: 38 NRHINMCL 45
>sp|PG036_VAR67|PROTEIN OPG036|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 NRHTQVCI 8
NRH +C+
Sbjct: 38 NRHINMCL 45
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 2 RHTQVCING 10
RH C NG
Sbjct: 587 RHMDRCSNG 595
>sp|PG003_MONPV|ANKYRIN repeat protein OPG003|Monkeypox virus (MPXV)
Query: 3 HTQVCIN 9
HT+ C+N
Sbjct: 444 HTKFCLN 450
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 1 NRHTQVCIN 9
N H +C+N
Sbjct: 208 NVHNTLCLN 216
>sp|YVAG_VACCC|UNCHARACTERIZED 9.3 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 NRHTQVCIN 9
N H+ +CIN
Sbjct: 46 NIHSVICIN 54
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 NRHTQVC 7
N HT VC
Sbjct: 149 NGHTYVC 155
>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 NRHTQVCIN 9
N H +C+N
Sbjct: 208 NIHNTLCLN 216
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 NRHTQVCI 8
N +TQ C+
Sbjct: 2664 NNNTQFCV 2671
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 NRHTQVCI 8
N +TQ C+
Sbjct: 2661 NNNTQFCV 2668
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 NRHTQVC 7
N HT VC
Sbjct: 149 NGHTYVC 155
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 2 RHTQVCIN 9
R+TQ C N
Sbjct: 331 RNTQPCSN 338
>sp|NS7A_SARS2|ORF7A protein|Severe acute respiratory syndrome coronavirus
Query: 3 HTQVCING 10
H Q C+ G
Sbjct: 19 HYQECVRG 26
>sp|NS7A_SARS|ORF7A protein|Severe acute respiratory syndrome coronavirus
Query: 3 HTQVCING 10
H Q C+ G
Sbjct: 19 HYQECVRG 26
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 NRHTQVCI 8
+RH VC+
Sbjct: 1203 HRHEPVCL 1210
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 3 HTQVC 7
HTQ C
Sbjct: 453 HTQAC 457
113|Sequence|561|570|VCINGQCAGS
>sp|PAX_I60A0|PROTEIN PA-X|Influenza A virus (strain A/Ann
Query: 5 GQCAGS 10
GQCAGS
Sbjct: 209 GQCAGS 214
>sp|PAX_I57A5|PROTEIN PA-X|Influenza A virus (strain A/Singapore/1/1957
Query: 5 GQCAGS 10
GQCAGS
Sbjct: 209 GQCAGS 214
>sp|PAX_I57A3|PROTEIN PA-X|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 5 GQCAGS 10
GQCAGS
Sbjct: 209 GQCAGS 214
>sp|PAX_I57A2|PROTEIN PA-X|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 5 GQCAGS 10
GQCAGS
Sbjct: 209 GQCAGS 214
>sp|PAX_I57A1|PROTEIN PA-X|Influenza A virus (strain A/Leningrad/134/1957
Query: 5 GQCAGS 10
GQCAGS
Sbjct: 209 GQCAGS 214
>sp|PAX_I57A0|PROTEIN PA-X|Influenza A virus (strain A/Japan/305/1957
Query: 5 GQCAGS 10
GQCAGS
Sbjct: 209 GQCAGS 214
>sp|PAX_I07A0|PROTEIN PA-X|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 5 GQCAGS 10
GQCAGS
Sbjct: 209 GQCAGS 214
>sp|PAX_I00A1|PROTEIN PA-X|Influenza A virus (strain A/New
Query: 5 GQCAGS 10
GQCAGS
Sbjct: 209 GQCAGS 214
>sp|VE2_HPV31|REGULATORY protein E2|Human papillomavirus 31
Query: 1 VCINGQC 7
+CI+GQC
Sbjct: 139 LCIDGQC 145
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 2 CINGQC 7
CINGQC
Sbjct: 568 CINGQC 573
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 VCINGQCAG 9
VC NGQ G
Sbjct: 661 VCWNGQAGG 669
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 1 VCINGQCAG 9
VC+ G+C+G
Sbjct: 220 VCLEGRCSG 228
>sp|NRAM_I80A4|NEURAMINIDASE A virus (strain A/Memphis/4/1980
Query: 1 VCINGQCA 8
VCING C
Sbjct: 231 VCINGTCT 238
>sp|NRAM_I82A7|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 1 VCINGQCA 8
VCING C
Sbjct: 208 VCINGTCT 215
>sp|NRAM_I77AH|NEURAMINIDASE A virus (strain A/Texas/1/1977
Query: 1 VCINGQCA 8
VCING C
Sbjct: 231 VCINGTCT 238
>sp|NRAM_I79A0|NEURAMINIDASE A virus (strain A/Bangkok/1/1979
Query: 1 VCINGQCA 8
VCING C
Sbjct: 231 VCINGTCT 238
>sp|NRAM_I78A8|NEURAMINIDASE A virus (strain A/Memphis/18/1978
Query: 1 VCINGQCA 8
VCING C
Sbjct: 231 VCINGTCT 238
>sp|NRAM_I76AB|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 1 VCINGQCA 8
VCING C
Sbjct: 231 VCINGTCT 238
>sp|NRAM_I76A6|NEURAMINIDASE A virus (strain A/Memphis/110/1976
Query: 1 VCINGQCA 8
VCING C
Sbjct: 231 VCINGTCT 238
>sp|NRAM_I96A1|NEURAMINIDASE A virus (strain A/Niigata/137/1996
Query: 1 VCINGQCA 8
VCING C
Sbjct: 231 VCINGTCT 238
>sp|NRAM_I78A7|NEURAMINIDASE A virus (strain A/Memphis/2/1978
Query: 1 VCINGQCA 8
VCING C
Sbjct: 231 VCINGTCT 238
>sp|NRAM_I76AI|NEURAMINIDASE A virus (strain A/Swine/New
Query: 1 VCINGQC 7
VCING C
Sbjct: 232 VCINGSC 238
>sp|NRAM_I76A7|NEURAMINIDASE A virus (strain A/New
Query: 1 VCINGQC 7
VCING C
Sbjct: 232 VCINGSC 238
>sp|NRAM_I75A3|NEURAMINIDASE A virus (strain A/Victoria/3/1975
Query: 1 VCINGQCA 8
VCING C
Sbjct: 231 VCINGTCT 238
>sp|NRAM_I75A0|NEURAMINIDASE A virus (strain A/Beijing/39/1975
Query: 1 VCINGQCA 8
VCING C
Sbjct: 231 VCINGTCT 238
>sp|NRAM_I93A0|NEURAMINIDASE A virus (strain A/Kitakyushu/159/1993
Query: 1 VCINGQCA 8
VCING C
Sbjct: 231 VCINGTCT 238
>sp|NRAM_I83A8|NEURAMINIDASE A virus (strain A/Hong
Query: 1 VCINGQCA 8
VCING C
Sbjct: 231 VCINGTCT 238
>sp|NRAM_I77A4|NEURAMINIDASE A virus (strain A/Swine/Colorado/1/1977
Query: 1 VCINGQCA 8
VCING C
Sbjct: 231 VCINGTCT 238
>sp|NRAM_I73A5|NEURAMINIDASE A virus (strain A/Port
Query: 1 VCINGQCA 8
VCING C
Sbjct: 231 VCINGTCT 238
>sp|NRAM_I72A4|NEURAMINIDASE A virus (strain A/Memphis/101/1972
Query: 1 VCINGQCA 8
VCING C
Sbjct: 231 VCINGTCT 238
>sp|NRAM_I72A3|NEURAMINIDASE A virus (strain A/Memphis/102/1972
Query: 1 VCINGQCA 8
VCING C
Sbjct: 231 VCINGTCT 238
>sp|NRAM_I72A2|NEURAMINIDASE A virus (strain A/Udorn/307/1972
Query: 1 VCINGQCA 8
VCING C
Sbjct: 231 VCINGTCT 238
>sp|NRAM_I72A8|NEURAMINIDASE A virus (strain A/Udorn/1972
Query: 1 VCINGQCA 8
VCING C
Sbjct: 231 VCINGTCT 238
>sp|NRAM_I71A1|NEURAMINIDASE A virus (strain A/Memphis/1/1971
Query: 1 VCINGQCA 8
VCING C
Sbjct: 231 VCINGTCT 238
>sp|NRAM_I70A0|NEURAMINIDASE A virus (strain A/Qu/7/1970
Query: 1 VCINGQCA 8
VCING C
Sbjct: 231 VCINGTCT 238
>sp|NRAM_I67A2|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 VCINGQC 7
VCING C
Sbjct: 232 VCINGSC 238
>sp|NRAM_I61A1|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 VCINGQC 7
VCING C
Sbjct: 232 VCINGSC 238
>sp|NRAM_I57A4|NEURAMINIDASE A virus (strain A/RI/5-/1957
Query: 1 VCINGQCA 8
VCING C
Sbjct: 231 VCINGTCT 238
>sp|NRAM_I57A2|NEURAMINIDASE A virus (strain A/Leningrad/134/17/1957
Query: 1 VCINGQCA 8
VCING C
Sbjct: 231 VCINGTCT 238
>sp|NRAM_I69A0|NEURAMINIDASE A virus (strain A/England/878/1969
Query: 1 VCINGQCA 8
VCING C
Sbjct: 231 VCINGTCT 238
>sp|NRAM_I68A4|NEURAMINIDASE A virus (strain A/Hong
Query: 1 VCINGQCA 8
VCING C
Sbjct: 231 VCINGTCT 238
>sp|NRAM_I67A0|NEURAMINIDASE A virus (strain A/Tokyo/3/1967
Query: 1 VCINGQCA 8
VCING C
Sbjct: 231 VCINGTCT 238
>sp|NRAM_I57A1|NEURAMINIDASE A virus (strain A/Leningrad/134/1957
Query: 1 VCINGQCA 8
VCING C
Sbjct: 231 VCINGTCT 238
>sp|NRAM_I68A6|NEURAMINIDASE A virus (strain A/Northern
Query: 1 VCINGQCA 8
VCING C
Sbjct: 231 VCINGTCT 238
>sp|NRAM_I68A5|NEURAMINIDASE A virus (strain A/Korea/426/1968
Query: 1 VCINGQCA 8
VCING C
Sbjct: 231 VCINGTCT 238
>sp|NRAM_I68A0|NEURAMINIDASE A virus (strain A/Aichi/2/1968
Query: 1 VCINGQCA 8
VCING C
Sbjct: 231 VCINGTCT 238
>sp|NRAM_I60A0|NEURAMINIDASE A virus (strain A/Ann
Query: 1 VCINGQCA 8
VCING C
Sbjct: 231 VCINGTCT 238
>sp|NRAM_I57A5|NEURAMINIDASE A virus (strain A/Singapore/1/1957
Query: 1 VCINGQCA 8
VCING C
Sbjct: 231 VCINGTCT 238
>sp|NRAM_I76A9|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 1 VCINGQCA 8
VCING C
Sbjct: 231 VCINGTCT 238
>sp|NRAM_I57A0|NEURAMINIDASE A virus (strain A/Japan/305/1957
Query: 1 VCINGQCA 8
VCING C
Sbjct: 231 VCINGTCT 238
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 CINGQC 7
CING C
Sbjct: 1073 CINGAC 1078
>sp|PAX_I73A4|PROTEIN PA-X|Influenza A virus (strain A/Equine/London/1416/1973
Query: 5 GQCAG 9
GQCAG
Sbjct: 209 GQCAG 213
>sp|PAX_I68A6|PROTEIN PA-X|Influenza A virus (strain A/Northern
Query: 5 GQCAG 9
GQCAG
Sbjct: 209 GQCAG 213
>sp|PAX_I68A5|PROTEIN PA-X|Influenza A virus (strain A/Korea/426/1968
Query: 5 GQCAG 9
GQCAG
Sbjct: 209 GQCAG 213
>sp|PAX_I68A4|PROTEIN PA-X|Influenza A virus (strain A/Hong
Query: 5 GQCAG 9
GQCAG
Sbjct: 209 GQCAG 213
>sp|PAX_I67A0|PROTEIN PA-X|Influenza A virus (strain A/Tokyo/3/1967
Query: 5 GQCAG 9
GQCAG
Sbjct: 209 GQCAG 213
>sp|PAX_I30A0|PROTEIN PA-X|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 5 GQCAG 9
GQCAG
Sbjct: 209 GQCAG 213
>sp|NRAM_I000F|NEURAMINIDASE A virus (strain A/Chicken/Weybridge
Query: 1 VCINGQCA 8
VC NG CA
Sbjct: 231 VCYNGTCA 238
>sp|NRAM_I07A0|NEURAMINIDASE A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 VCINGQC 7
VC+NG C
Sbjct: 232 VCVNGSC 238
>sp|NRAM_I83A1|NEURAMINIDASE A virus (strain A/Chile/1/1983
Query: 1 VCINGQC 7
VC+NG C
Sbjct: 232 VCVNGSC 238
>sp|NRAM_I80AA|NEURAMINIDASE A virus (strain A/India/6263/1980
Query: 1 VCINGQC 7
VC+NG C
Sbjct: 232 VCVNGSC 238
>sp|NRAM_I77AB|NEURAMINIDASE A virus (strain A/USSR/90/1977
Query: 1 VCINGQC 7
VC+NG C
Sbjct: 232 VCVNGSC 238
>sp|NRAM_I77AA|NEURAMINIDASE A virus (strain A/Brazil/11/1978
Query: 1 VCINGQC 7
VC+NG C
Sbjct: 232 VCVNGSC 238
>sp|NRAM_I00A1|NEURAMINIDASE A virus (strain A/New
Query: 1 VCINGQC 7
VC+NG C
Sbjct: 232 VCVNGSC 238
>sp|NRAM_I96A3|NEURAMINIDASE A virus (strain A/China:Nanchang/11/1996
Query: 1 VCINGQC 7
VC+NG C
Sbjct: 232 VCVNGSC 238
>sp|NRAM_I40A0|NEURAMINIDASE A virus (strain A/Hickox/1940
Query: 1 VCINGQC 7
VC+NG C
Sbjct: 232 VCVNGSC 238
>sp|NRAM_I47A0|NEURAMINIDASE A virus (strain A/Fort
Query: 1 VCINGQC 7
VC+NG C
Sbjct: 232 VCVNGSC 238
>sp|NRAM_I79A4|NEURAMINIDASE A virus (strain A/Kiev/59/1979
Query: 1 VCINGQC 7
VC+NG C
Sbjct: 232 VCVNGSC 238
>sp|NRAM_I54A0|NEURAMINIDASE A virus (strain A/Leningrad/1/1954
Query: 1 VCINGQC 7
VC+NG C
Sbjct: 232 VCVNGSC 238
>sp|NRAM_I54A2|NEURAMINIDASE A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 VCINGQC 7
VC+NG C
Sbjct: 232 VCVNGSC 238
>sp|NRAM_I51A0|NEURAMINIDASE A virus (strain A/USA:Albany/12/1951
Query: 1 VCINGQC 7
VC+NG C
Sbjct: 232 VCVNGSC 238
>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain Merlin)
Query: 4 NGQCAGS 10
NG CAG+
Sbjct: 229 NGPCAGA 235
>sp|NRAM_I45A0|NEURAMINIDASE A virus (strain A/USA:Huston/AA/1945
Query: 1 VCINGQC 7
VC+NG C
Sbjct: 232 VCVNGSC 238
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CINGQC 7
C+NG C
Sbjct: 1073 CVNGAC 1078
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CINGQC 7
CING C
Sbjct: 1073 CINGVC 1078
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CINGQC 7
CING C
Sbjct: 1073 CINGVC 1078
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 CINGQC 7
CING C
Sbjct: 1073 CINGVC 1078
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 CINGQC 7
CING C
Sbjct: 1073 CINGVC 1078
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CINGQC 7
CING C
Sbjct: 1073 CINGVC 1078
>sp|NRAM_I96A2|NEURAMINIDASE A virus (strain A/USA:Memphis/10/1996
Query: 1 VCINGQC 7
VC+NG C
Sbjct: 232 VCMNGSC 238
>sp|NRAM_I06A0|NEURAMINIDASE A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 VCINGQC 7
VC+NG C
Sbjct: 232 VCMNGSC 238
>sp|SEMA_VAR67|SEMAPHORIN-LIKE protein A43|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 VCINGQCAGS 10
+C+N +C S
Sbjct: 52 MCLNDECGPS 61
>sp|MTA_HHV8P|POST-TRANSCRIPTIONAL regulator MTA|Human herpesvirus 8 type P
Query: 1 VCINGQCAGS 10
+C N +CA +
Sbjct: 426 LCRNSECAAA 435
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 3 INGQCAGS 10
+NG C GS
Sbjct: 495 LNGSCVGS 502
>sp|PAX_I96A3|PROTEIN PA-X|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 6 QCAGS 10
QCAGS
Sbjct: 210 QCAGS 214
>sp|PAX_I96A2|PROTEIN PA-X|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 6 QCAGS 10
QCAGS
Sbjct: 210 QCAGS 214
>sp|PAX_I83A1|PROTEIN PA-X|Influenza A virus (strain A/Chile/1/1983
Query: 6 QCAGS 10
QCAGS
Sbjct: 210 QCAGS 214
>sp|PAX_I80AA|PROTEIN PA-X|Influenza A virus (strain A/India/6263/1980
Query: 6 QCAGS 10
QCAGS
Sbjct: 210 QCAGS 214
>sp|PAX_I77AB|PROTEIN PA-X|Influenza A virus (strain A/USSR/90/1977
Query: 6 QCAGS 10
QCAGS
Sbjct: 210 QCAGS 214
>sp|PAX_I77AA|PROTEIN PA-X|Influenza A virus (strain A/Brazil/11/1978
Query: 6 QCAGS 10
QCAGS
Sbjct: 210 QCAGS 214
>sp|PAX_I54A2|PROTEIN PA-X|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 6 QCAGS 10
QCAGS
Sbjct: 210 QCAGS 214
>sp|PAX_I51A0|PROTEIN PA-X|Influenza A virus (strain A/USA:Albany/12/1951
Query: 6 QCAGS 10
QCAGS
Sbjct: 210 QCAGS 214
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 CINGQC 7
C+NG C
Sbjct: 1077 CVNGVC 1082
>sp|NRAM_I85A3|NEURAMINIDASE A virus (strain A/Chicken/Victoria/1/1985
Query: 1 VCINGQCA 8
VC NG CA
Sbjct: 231 VCHNGTCA 238
>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52
Query: 1 VCINGQC 7
+C+N +C
Sbjct: 112 ICVNTEC 118
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CINGQC 7
C+NG C
Sbjct: 1073 CVNGVC 1078
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CINGQC 7
C+NG C
Sbjct: 1073 CVNGVC 1078
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CINGQC 7
C+NG C
Sbjct: 1073 CVNGVC 1078
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 CINGQC 7
C+NG C
Sbjct: 1073 CVNGVC 1078
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CINGQC 7
C+NG C
Sbjct: 1073 CVNGVC 1078
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 2 CINGQCAGS 10
CI+ QC S
Sbjct: 176 CIHVQCNAS 184
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 2 CINGQCAGS 10
CI+ QC S
Sbjct: 176 CIHVQCNAS 184
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 2 CINGQCAGS 10
CI+ QC S
Sbjct: 176 CIHVQCNAS 184
>sp|MATRX_ABLVB|MATRIX protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 VCINGQ 6
+CING+
Sbjct: 63 LCINGE 68
>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 INGQCA 8
ING+C+
Sbjct: 165 INGKCS 170
>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 INGQCA 8
ING+C+
Sbjct: 165 INGKCS 170
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 INGQCA 8
ING+C+
Sbjct: 165 INGKCS 170
>sp|CEP2_EBVG|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 CINGQC 7
C NG+C
Sbjct: 205 CDNGEC 210
>sp|CEP2_EBVB9|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 CINGQC 7
C NG+C
Sbjct: 205 CDNGEC 210
>sp|CEP2_EBVA8|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 CINGQC 7
C NG+C
Sbjct: 205 CDNGEC 210
>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 INGQCA 8
ING+C+
Sbjct: 165 INGKCS 170
>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 INGQCA 8
ING+C+
Sbjct: 165 INGKCS 170
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 3 INGQCA 8
ING+C+
Sbjct: 165 INGKCS 170
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 VCINGQCAG 9
V I+G C G
Sbjct: 1063 VIIDGNCDG 1071
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 VCINGQCAG 9
V I+G C G
Sbjct: 1063 VIIDGNCDG 1071
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 VCINGQCAG 9
V I+G C G
Sbjct: 1063 VIIDGNCDG 1071
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 VCINGQCAG 9
V I+G C G
Sbjct: 1063 VIIDGNCDG 1071
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 VCINGQCAG 9
V I+G C G
Sbjct: 1063 VIIDGNCDG 1071
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 VCINGQCAG 9
V I+G C G
Sbjct: 1063 VIIDGNCDG 1071
>sp|MATRX_RABVN|MATRIX protein|Rabies virus (strain Nishigahara RCEH)
Query: 2 CINGQ 6
CING+
Sbjct: 54 CINGE 58
>sp|MATRX_RABVI|MATRIX protein|Rabies virus (strain India) (RABV)
Query: 2 CINGQ 6
CING+
Sbjct: 54 CINGE 58
>sp|MATRX_RABVD|MATRIX protein|Rabies virus (strain China/DRV) (RABV)
Query: 2 CINGQ 6
CING+
Sbjct: 54 CINGE 58
>sp|MATRX_LBV|MATRIX protein|Lagos bat virus (LBV)
Query: 2 CINGQ 6
CING+
Sbjct: 54 CINGE 58
>sp|MATRX_ABLVH|MATRIX protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 2 CINGQ 6
CING+
Sbjct: 54 CINGE 58
>sp|MATRX_RABVH|MATRIX protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 CINGQ 6
CING+
Sbjct: 54 CINGE 58
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 INGQCA 8
ING+C+
Sbjct: 165 INGKCS 170
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 1 VCINGQCAG 9
VC NG G
Sbjct: 813 VCSNGHMCG 821
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 2 CINGQCAG 9
CI C+G
Sbjct: 338 CIGHSCSG 345
>sp|NRAM_I33A0|NEURAMINIDASE A virus (strain A/Wilson-Smith/1933
Query: 1 VCINGQC 7
C+NG C
Sbjct: 216 TCVNGSC 222
>sp|NRAM_I02A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 CINGQC 7
C+NG C
Sbjct: 213 CVNGSC 218
>sp|NRAM_I03A1|NEURAMINIDASE A virus (strain A/Chicken/Shantou/4231/2003
Query: 2 CINGQC 7
C+NG C
Sbjct: 213 CVNGSC 218
>sp|NRAM_I02A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 CINGQC 7
C+NG C
Sbjct: 213 CVNGSC 218
>sp|NRAM_I34A1|NEURAMINIDASE A virus (strain A/Puerto
Query: 2 CINGQC 7
C+NG C
Sbjct: 218 CVNGSC 223
>sp|NRAM_I05A1|NEURAMINIDASE A virus (strain A/Goose/Guangxi/345/2005
Query: 2 CINGQC 7
C+NG C
Sbjct: 205 CVNGSC 210
>sp|NRAM_I04A1|NEURAMINIDASE A virus (strain A/Vietnam/1203/2004
Query: 2 CINGQC 7
C+NG C
Sbjct: 213 CVNGSC 218
>sp|NRAM_I02A6|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 CINGQC 7
C+NG C
Sbjct: 213 CVNGSC 218
>sp|NRAM_I02A5|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 CINGQC 7
C+NG C
Sbjct: 213 CVNGSC 218
>sp|NRAM_I02A4|NEURAMINIDASE A virus (strain A/Silky
Query: 2 CINGQC 7
C+NG C
Sbjct: 213 CVNGSC 218
>sp|NRAM_I01A0|NEURAMINIDASE A virus (strain A/Silky
Query: 2 CINGQC 7
C+NG C
Sbjct: 213 CVNGSC 218
>sp|NRAM_I97A1|NEURAMINIDASE A virus (strain A/Hong
Query: 2 CINGQC 7
C+NG C
Sbjct: 214 CVNGSC 219
>sp|NRAM_I97A0|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 CINGQC 7
C+NG C
Sbjct: 214 CVNGSC 219
>sp|NRAM_I96A0|NEURAMINIDASE A virus (strain A/Goose/Guangdong/1/1996
Query: 2 CINGQC 7
C+NG C
Sbjct: 233 CVNGSC 238
>sp|NRAM_I03A0|NEURAMINIDASE A virus (strain A/Hong
Query: 2 CINGQC 7
C+NG C
Sbjct: 233 CVNGSC 238
>sp|NRAM_I43A0|NEURAMINIDASE A virus (strain A/USA:Iowa/1943
Query: 2 CINGQC 7
C+NG C
Sbjct: 233 CVNGSC 238
>sp|NRAM_I35A3|NEURAMINIDASE A virus (strain A/USA:Phila/1935
Query: 2 CINGQC 7
C+NG C
Sbjct: 233 CVNGSC 238
>sp|NRAM_I02A7|NEURAMINIDASE A virus (strain A/Teal/China/2978.1/2002
Query: 2 CINGQC 7
C+NG C
Sbjct: 218 CVNGSC 223
>sp|NRAM_I36A0|NEURAMINIDASE A virus (strain A/Henry/1936
Query: 2 CINGQC 7
C+NG C
Sbjct: 233 CVNGSC 238
>sp|NRAM_I02A1|NEURAMINIDASE A virus (strain A/Guinea
Query: 2 CINGQC 7
C+NG C
Sbjct: 213 CVNGSC 218
>sp|NRAM_I01A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 CINGQC 7
C+NG C
Sbjct: 233 CVNGSC 238
>sp|NRAM_I01A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 CINGQC 7
C+NG C
Sbjct: 233 CVNGSC 238
>sp|NRAM_I00A0|NEURAMINIDASE A virus (strain A/Duck/Hong
Query: 2 CINGQC 7
C+NG C
Sbjct: 233 CVNGSC 238
>sp|NRAM_I01A1|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 CINGQC 7
C+NG C
Sbjct: 233 CVNGSC 238
>sp|NRAM_I18A0|NEURAMINIDASE A virus (strain A/Brevig
Query: 2 CINGQC 7
C+NG C
Sbjct: 233 CVNGSC 238
114|Sequence|566|575|QCAGSICEKY
>sp|FUS_NIPAV|FUSION glycoprotein F0|Nipah virus
Query: 1 QCAGSICEKY 10
QC GS+ E Y
Sbjct: 70 QCTGSVMENY 79
>sp|GLYCO_VSNJO|GLYCOPROTEIN stomatitis New Jersey virus
Query: 1 QCAGSICE 8
+C G ICE
Sbjct: 168 RCKGQICE 175
>sp|PAX_I96A3|PROTEIN PA-X|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 QCAGSICEKY 10
QCAGS+ + +
Sbjct: 210 QCAGSLTKAF 219
>sp|PAX_I00A1|PROTEIN PA-X|Influenza A virus (strain A/New
Query: 1 QCAGSICEKY 10
QCAGS+ + +
Sbjct: 210 QCAGSLTKAF 219
>sp|PAX_I07A0|PROTEIN PA-X|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 QCAGSICEKY 10
QCAGS+ + +
Sbjct: 210 QCAGSLIKAF 219
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 4 GSICEKY 10
GS+C+K+
Sbjct: 150 GSLCQKF 156
>sp|FUS_HENDH|FUSION glycoprotein F0|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 QCAGSICEKY 10
+C G++ E Y
Sbjct: 70 KCTGTVMENY 79
>sp|BILF2_EBVB9|GLYCOPROTEIN BILF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 CAGSIC 7
C GS+C
Sbjct: 11 CVGSVC 16
>sp|PAX_I51A0|PROTEIN PA-X|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 QCAGSI 6
QCAGS+
Sbjct: 210 QCAGSL 215
>sp|PAX_I54A2|PROTEIN PA-X|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 QCAGSI 6
QCAGS+
Sbjct: 210 QCAGSL 215
>sp|PAX_I83A1|PROTEIN PA-X|Influenza A virus (strain A/Chile/1/1983
Query: 1 QCAGSI 6
QCAGS+
Sbjct: 210 QCAGSL 215
>sp|PAX_I80AA|PROTEIN PA-X|Influenza A virus (strain A/India/6263/1980
Query: 1 QCAGSI 6
QCAGS+
Sbjct: 210 QCAGSL 215
>sp|PAX_I96A2|PROTEIN PA-X|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 QCAGSI 6
QCAGS+
Sbjct: 210 QCAGSL 215
>sp|PG083_VACCC|CORE protease OPG082|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CAGSICEKY 10
C G + EKY
Sbjct: 43 CNGYVVEKY 51
>sp|PG083_VARV|CORE protease OPG082|Variola virus
Query: 2 CAGSICEKY 10
C G + EKY
Sbjct: 43 CNGYVVEKY 51
>sp|PG083_VAR67|CORE protease OPG082|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 CAGSICEKY 10
C G + EKY
Sbjct: 43 CNGYVVEKY 51
>sp|A26_VACCC|PUTATIVE A-type inclusion protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CAGSICEK 9
C G+ CE+
Sbjct: 211 CGGNPCER 218
>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1
Query: 1 QCAGSICEK 9
QC S+CE+
Sbjct: 613 QCLLSLCEE 621
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 1 QCAGSICE 8
QC G++C+
Sbjct: 642 QCGGALCQ 649
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 2 CAGSICEK 9
C G+ CE+
Sbjct: 1098 CGGNPCER 1105
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CAGSICE 8
CA +CE
Sbjct: 467 CAAGLCE 473
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CAGSICE 8
CA +CE
Sbjct: 467 CAAGLCE 473
>sp|IE2_HHV6Z|IMMEDIATE-EARLY protein 2|Human herpesvirus 6B (strain Z29)
Query: 3 AGSICEKY 10
A IC KY
Sbjct: 1471 ASKICNKY 1478
>sp|ICP27_HHV2H|MRNA export factor|Human herpesvirus 2 (strain HG52)
Query: 1 QCAGSICE 8
+C+ +CE
Sbjct: 482 ECSSRVCE 489
>sp|ICP27_HHV1E|MRNA export factor|Human herpesvirus 1 (strain HFEM)
Query: 1 QCAGSICE 8
+C+ +CE
Sbjct: 481 ECSSRVCE 488
>sp|ICP27_HHV11|MRNA export factor|Human herpesvirus 1 (strain 17)
Query: 1 QCAGSICE 8
+C+ +CE
Sbjct: 482 ECSSRVCE 489
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 QC---AGSICEKY 10
QC AG++ E+Y
Sbjct: 133 QCNLHAGALAERY 145
>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QCAGSI 6
QCAG+I
Sbjct: 573 QCAGNI 578
>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QCAGSI 6
QCAG+I
Sbjct: 573 QCAGNI 578
>sp|NS1_I03A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Shantou/4231/2003
Query: 1 QCAGSICEK 9
+ AGS+C K
Sbjct: 105 KVAGSLCIK 113
>sp|NS1_I03A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong
Query: 1 QCAGSICEK 9
+ AGS+C K
Sbjct: 105 KVAGSLCIK 113
>sp|NS1_I02A7|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 1 QCAGSICEK 9
+ AGS+C K
Sbjct: 88 KVAGSLCIK 96
>sp|NS1_I02A6|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 QCAGSICEK 9
+ AGS+C K
Sbjct: 105 KVAGSLCIK 113
>sp|NS1_I02A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 QCAGSICEK 9
+ AGS+C K
Sbjct: 105 KVAGSLCIK 113
>sp|NS1_I01A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 QCAGSICEK 9
+ AGS+C K
Sbjct: 105 KVAGSLCIK 113
>sp|NS1_I01A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 QCAGSICEK 9
+ AGS+C K
Sbjct: 105 KVAGSLCIK 113
>sp|NS1_I01A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 QCAGSICEK 9
+ AGS+C K
Sbjct: 105 KVAGSLCIK 113
>sp|NS1_I01A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Silky
Query: 1 QCAGSICEK 9
+ AGS+C K
Sbjct: 105 KVAGSLCIK 113
>sp|NS1_I00A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Duck/Hong
Query: 1 QCAGSICEK 9
+ AGS+C K
Sbjct: 105 KVAGSLCIK 113
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 5 SICEKY 10
S+CEK+
Sbjct: 498 SLCEKH 503
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 SICEKY 10
S+CEK+
Sbjct: 498 SLCEKH 503
>sp|J1L_HCMVA|UNCHARACTERIZED protein J1L|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QCAGSI 6
QCAGS+
Sbjct: 102 QCAGSV 107
115|Sequence|571|580|ICEKYGLEEC
>sp|NSP4_ROTHC|NON-STRUCTURAL glycoprotein 4|Rotavirus C (isolate RVC/Human/United
Query: 1 ICEKYGLE 8
ICEK GLE
Sbjct: 138 ICEKSGLE 145
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ICEKYGLE 8
IC+ YG+E
Sbjct: 1247 ICKHYGVE 1254
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ICEKYGLE 8
IC+ YG+E
Sbjct: 1247 ICKHYGVE 1254
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ICEKYGLE 8
IC+ YG+E
Sbjct: 1247 ICKHYGVE 1254
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ICEKYGLE 8
IC+ YG+E
Sbjct: 1247 ICKHYGVE 1254
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ICEKYGLE 8
IC+ YG+E
Sbjct: 1247 ICKHYGVE 1254
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ICEKYGLE 8
IC+ YG+E
Sbjct: 1247 ICKHYGVE 1254
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ICEKYGLE 8
IC+ YG+E
Sbjct: 1247 ICKHYGVE 1254
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ICEKYGLE 8
IC+ YG+E
Sbjct: 1247 ICKHYGVE 1254
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ICEKYGLE 8
IC+ YG+E
Sbjct: 1247 ICKHYGVE 1254
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 1 ICEKYG 6
+C+KYG
Sbjct: 556 VCDKYG 561
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 1 ICEKYG 6
+C+KYG
Sbjct: 555 VCDKYG 560
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 1 ICEKYG 6
+C+KYG
Sbjct: 555 VCDKYG 560
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 1 ICEKYG 6
+C+KYG
Sbjct: 555 VCDKYG 560
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 1 ICEKYG 6
+C+KYG
Sbjct: 556 VCDKYG 561
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 1 ICEKYG 6
+C+KYG
Sbjct: 555 VCDKYG 560
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 1 ICEKYG 6
+C+KYG
Sbjct: 555 VCDKYG 560
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 1 ICEKYG 6
+C+KYG
Sbjct: 555 VCDKYG 560
>sp|VE2_HPV45|REGULATORY protein E2|Human papillomavirus 45
Query: 2 CEKYG 6
CEKYG
Sbjct: 182 CEKYG 186
>sp|VE2_HPV18|REGULATORY protein E2|Human papillomavirus type 18
Query: 2 CEKYG 6
CEKYG
Sbjct: 180 CEKYG 184
>sp|VE6_HPV27|PROTEIN E6|Human papillomavirus 27
Query: 1 ICEKYGLE 8
+C++YGLE
Sbjct: 20 LCKQYGLE 27
>sp|VCYCL_HHV8P|VIRAL cyclin homolog|Human herpesvirus 8 type P
Query: 1 ICEKYGLE 8
+C++Y LE
Sbjct: 61 VCQEYNLE 68
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 1 ICEKYGLEEC 10
IC KYG C
Sbjct: 550 ICVKYGNMRC 559
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 EKYGLEE 9
+KYGLE+
Sbjct: 6334 QKYGLED 6340
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 EKYGLEE 9
+KYGLE+
Sbjct: 6673 QKYGLED 6679
>sp|VE6_HPV2A|PROTEIN E6|Human papillomavirus type 2a
Query: 1 ICEKYGLE 8
+C++YGLE
Sbjct: 14 LCKEYGLE 21
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 EKYGLE 8
EKYG+E
Sbjct: 3139 EKYGVE 3144
>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1
Query: 4 KYGLEE 9
KYG+EE
Sbjct: 189 KYGMEE 194
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 1 ICEKYGLE 8
IC + GLE
Sbjct: 141 ICTRLGLE 148
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 ICEKYGLE 8
IC + GLE
Sbjct: 141 ICTRLGLE 148
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 ICEKYGLE 8
+CE+ GL+
Sbjct: 144 LCERLGLD 151
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 1 ICEKYGLE 8
+CE+ GL+
Sbjct: 144 LCERLGLD 151
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 1 ICEKYGLE 8
+CE+ GL+
Sbjct: 144 LCERLGLD 151
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 1 ICEKYGLE 8
+CE+ GL+
Sbjct: 144 LCERLGLD 151
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 ICEKYGLE 8
+CE+ GL+
Sbjct: 144 LCERLGLD 151
>sp|VE6_HPV57|PROTEIN E6|Human papillomavirus 57
Query: 1 ICEKYGLE 8
+C +YGLE
Sbjct: 14 LCREYGLE 21
>sp|NSP3_ROTJ1|NON-STRUCTURAL protein 3|Rotavirus X (strain
Query: 1 ICEKYGLE 8
+C K+GL+
Sbjct: 207 LCNKFGLQ 214
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 KYGLEE 9
KYGLE+
Sbjct: 6306 KYGLED 6311
>sp|GD_HHV2H|ENVELOPE glycoprotein D|Human herpesvirus 2 (strain HG52)
Query: 1 ICEKYGLEE 9
+C KY L +
Sbjct: 23 VCAKYALAD 31
>sp|GD_HHV23|ENVELOPE glycoprotein D|Human herpesvirus 2 (strain 333)
Query: 1 ICEKYGLEE 9
+C KY L +
Sbjct: 23 VCAKYALAD 31
>sp|NS7A_SARS|ORF7A protein|Severe acute respiratory syndrome coronavirus
Query: 2 CEKYGLEEC 10
CE Y +EC
Sbjct: 15 CELYHYQEC 23
>sp|NSP3_ROTB2|NON-STRUCTURAL protein 3|Rotavirus X (isolate
Query: 1 ICEKYGLE 8
+C K+GL+
Sbjct: 207 LCNKFGLQ 214
>sp|NS7A_SARS2|ORF7A protein|Severe acute respiratory syndrome coronavirus
Query: 2 CEKYGLEEC 10
CE Y +EC
Sbjct: 15 CELYHYQEC 23
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 KYGLEE 9
KYGLE+
Sbjct: 6731 KYGLED 6736
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 KYGLEE 9
KYGLE+
Sbjct: 6761 KYGLED 6766
Query: 1 ICEKYGLEEC 10
+C K+ E C
Sbjct: 6465 VCSKHAEEYC 6474
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 EKYGLE 8
+KYGLE
Sbjct: 6652 KKYGLE 6657
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 KYGLEE 9
KYGLE+
Sbjct: 6711 KYGLED 6716
Query: 1 ICEKYGLEEC 10
+C K+ E C
Sbjct: 6415 VCSKHAEEYC 6424
>sp|PG056_VACCP|PROTEIN OPG056|Vaccinia virus (strain L-IVP) (VACV)
Query: 3 EKYGLE 8
E+YG+E
Sbjct: 121 ERYGIE 126
>sp|PG056_VACCA|PROTEIN OPG056|Vaccinia virus (strain Ankara) (VACV)
Query: 3 EKYGLE 8
E+YG+E
Sbjct: 121 ERYGIE 126
>sp|PG056_MONPV|PROTEIN OPG056|Monkeypox virus (MPXV)
Query: 3 EKYGLE 8
E+YG+E
Sbjct: 120 ERYGIE 125
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 2 CEKYGL 7
CE++GL
Sbjct: 718 CEEFGL 723
116|Sequence|576|585|GLEECTCASS
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 GLEECTCAS 9
GL EC C+S
Sbjct: 1259 GLMECQCSS 1267
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 LEECTCASS 10
LE CTC S+
Sbjct: 1126 LEPCTCGSA 1134
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 LEECTCASS 10
L+ CTC SS
Sbjct: 1128 LDPCTCGSS 1136
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 LEECTCASS 10
LE C C SS
Sbjct: 1126 LEPCACGSS 1134
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 LEECTCASS 10
L CTC SS
Sbjct: 1122 LTPCTCGSS 1130
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 LEECTCASS 10
L CTC SS
Sbjct: 1125 LAPCTCGSS 1133
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 LEECTCASS 10
L CTC SS
Sbjct: 1120 LTPCTCGSS 1128
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 LEECTCASS 10
L CTC SS
Sbjct: 1125 LTPCTCGSS 1133
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 LEECTCASS 10
L CTC SS
Sbjct: 1120 LTPCTCGSS 1128
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 LEECTCASS 10
L CTC SS
Sbjct: 1120 LTPCTCGSS 1128
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 LEECTCASS 10
L CTC SS
Sbjct: 1120 LTPCTCGSS 1128
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 LEECTCAS 9
LE CTC +
Sbjct: 1124 LEPCTCGA 1131
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 LEECTCAS 9
LE CTC +
Sbjct: 1124 LEPCTCGA 1131
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 LEECTCASS 10
L CTC S+
Sbjct: 1121 LTRCTCGSA 1129
>sp|PRO_HTLV2|GAG-PRO polyprotein|Human T-cell leukemia virus 2
Query: 1 GLEECTCA 8
GLEE CA
Sbjct: 275 GLEEPYCA 282
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 1 GLEECTCA 8
GLEE CA
Sbjct: 275 GLEEPYCA 282
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 EECTC 7
+ECTC
Sbjct: 479 QECTC 483
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 EECTC 7
+ECTC
Sbjct: 479 QECTC 483
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 LEECTCASS 10
L CTC S+
Sbjct: 1120 LAPCTCGSA 1128
>sp|GAG_HTLV2|GAG polyprotein|Human T-cell leukemia virus 2
Query: 1 GLEECTCA 8
GLEE CA
Sbjct: 275 GLEEPYCA 282
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 EECTC 7
+ECTC
Sbjct: 479 QECTC 483
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 LEECTCASS 10
L CTC SS
Sbjct: 1120 LTPCTCGSS 1128
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 EECTC 7
+ECTC
Sbjct: 479 QECTC 483
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 EECTC 7
+ECTC
Sbjct: 479 QECTC 483
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 LEECTCASS 10
L CTC SS
Sbjct: 1120 LTPCTCGSS 1128
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 EECTC 7
+ECTC
Sbjct: 479 QECTC 483
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 EECTC 7
+ECTC
Sbjct: 479 QECTC 483
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 LEECTCASS 10
L CTC SS
Sbjct: 1120 LTPCTCGSS 1128
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 LEECTCASS 10
L CTC SS
Sbjct: 1120 LTPCTCGSS 1128
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 2 LEECTC 7
L+EC C
Sbjct: 587 LDECAC 592
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 2 LEECTC 7
L+EC C
Sbjct: 587 LDECAC 592
>sp|M2_I000F|MATRIX protein 2|Influenza A virus (strain A/Chicken/Weybridge
Query: 4 ECTCASS 10
EC+C+ S
Sbjct: 16 ECSCSDS 22
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 LEECTCASS 10
L CTC S+
Sbjct: 1121 LTPCTCGSA 1129
>sp|NSS_SFTSV|NON-STRUCTURAL protein NS-S|SFTS phlebovirus (isolate
Query: 2 LEECTCA 8
L EC+C+
Sbjct: 37 LVECSCS 43
>sp|NRAM_INBUS|NEURAMINIDASE B virus (strain B/USSR/100/1983)
Query: 3 EECTCA 8
EECTC
Sbjct: 275 EECTCG 280
>sp|NRAM_INBYB|NEURAMINIDASE B virus (strain B/Yamagata/16/1988)
Query: 3 EECTCA 8
EECTC
Sbjct: 275 EECTCG 280
>sp|NRAM_INBOR|NEURAMINIDASE B virus (strain B/Oregon/5/1980)
Query: 3 EECTCA 8
EECTC
Sbjct: 275 EECTCG 280
>sp|NRAM_INBLE|NEURAMINIDASE B virus (strain B/Lee/1940)
Query: 3 EECTCA 8
EECTC
Sbjct: 275 EECTCG 280
>sp|NRAM_INBHK|NEURAMINIDASE B virus (strain B/Hong
Query: 3 EECTCA 8
EECTC
Sbjct: 275 EECTCG 280
>sp|NRAM_INBBE|NEURAMINIDASE B virus (strain B/Beijing/1/1987)
Query: 3 EECTCA 8
EECTC
Sbjct: 274 EECTCG 279
>sp|NRAM_INBVI|NEURAMINIDASE B virus (strain B/Victoria/3/1985)
Query: 3 EECTCA 8
EECTC
Sbjct: 274 EECTCG 279
>sp|NRAM_INBSI|NEURAMINIDASE B virus (strain B/Singapore/222/1979)
Query: 3 EECTCA 8
EECTC
Sbjct: 275 EECTCG 280
>sp|NRAM_INBME|NEURAMINIDASE B virus (strain B/Memphis/6/1986)
Query: 3 EECTCA 8
EECTC
Sbjct: 274 EECTCG 279
>sp|NRAM_INBMD|NEURAMINIDASE B virus (strain B/Maryland/1959)
Query: 3 EECTCA 8
EECTC
Sbjct: 275 EECTCG 280
>sp|NRAM_INBLN|NEURAMINIDASE B virus (strain B/Leningrad/179/1986)
Query: 3 EECTCA 8
EECTC
Sbjct: 274 EECTCG 279
>sp|NRAM_INBMF|NEURAMINIDASE B virus (strain B/Memphis/3/1989)
Query: 3 EECTCA 8
EECTC
Sbjct: 274 EECTCG 279
>sp|NRAM_I56A3|NEURAMINIDASE A virus (strain A/Equine/Prague/1/1956
Query: 2 LEECTC 7
+EEC+C
Sbjct: 273 IEECSC 278
>sp|PA_INBSI|POLYMERASE acidic protein|Influenza B virus (strain B/Singapore/222/1979)
Query: 1 GLEEC 5
G+EEC
Sbjct: 684 GIEEC 688
>sp|PA_INBP9|POLYMERASE acidic protein|Influenza B virus (strain B/Panama/45/1990)
Query: 1 GLEEC 5
G+EEC
Sbjct: 685 GIEEC 689
>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 1 GLEEC 5
G+EEC
Sbjct: 685 GIEEC 689
>sp|PA_INBAC|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 1 GLEEC 5
G+EEC
Sbjct: 685 GIEEC 689
>sp|POXIN_MONPZ|POXIN-SCHLAFEN virus (strain Zaire-96-I-16) (MPXV)
Query: 2 LEECTCA 8
+E C CA
Sbjct: 466 VERCCCA 472
>sp|NRAM_I74A1|NEURAMINIDASE A virus (strain A/Equine/Cor/16/1974
Query: 2 LEECTC 7
+EEC+C
Sbjct: 273 IEECSC 278
>sp|NRAM_I57A0|NEURAMINIDASE A virus (strain A/Japan/305/1957
Query: 2 LEECTC 7
+EEC+C
Sbjct: 275 IEECSC 280
>sp|NRAM_I57A5|NEURAMINIDASE A virus (strain A/Singapore/1/1957
Query: 2 LEECTC 7
+EEC+C
Sbjct: 275 IEECSC 280
>sp|PG049_VAR67|PROTEIN OPG049|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 CTCAS 9
CTCA+
Sbjct: 32 CTCAN 36
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 LEECTCASS 10
L CTC S+
Sbjct: 1125 LVPCTCGSA 1133
>sp|POXIN_MONPV|POXIN-SCHLAFEN virus (MPXV)
Query: 2 LEECTCA 8
+E C CA
Sbjct: 466 VERCCCA 472
>sp|NRAM_I85A3|NEURAMINIDASE A virus (strain A/Chicken/Victoria/1/1985
Query: 2 LEECTC 7
+EEC+C
Sbjct: 275 IEECSC 280
>sp|NRAM_I60A0|NEURAMINIDASE A virus (strain A/Ann
Query: 2 LEECTC 7
+EEC+C
Sbjct: 275 IEECSC 280
>sp|NRAM_I57A4|NEURAMINIDASE A virus (strain A/RI/5-/1957
Query: 2 LEECTC 7
+EEC+C
Sbjct: 275 IEECSC 280
>sp|NRAM_I80A2|NEURAMINIDASE A virus (strain A/Seal/Massachusetts/1/1980
Query: 2 LEECTC 7
+EEC+C
Sbjct: 274 IEECSC 279
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 LEECTCASS 10
+ CTC SS
Sbjct: 1120 MTPCTCGSS 1128
>sp|NRAM_I57A2|NEURAMINIDASE A virus (strain A/Leningrad/134/17/1957
Query: 2 LEECTC 7
+EEC+C
Sbjct: 275 IEECSC 280
>sp|NRAM_I57A1|NEURAMINIDASE A virus (strain A/Leningrad/134/1957
Query: 2 LEECTC 7
+EEC+C
Sbjct: 275 IEECSC 280
>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)
Query: 2 LEECTCA 8
+E C CA
Sbjct: 468 VERCCCA 474
>sp|NRAM_I82A7|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 2 LEECTC 7
+EEC+C
Sbjct: 252 VEECSC 257
>sp|NRAM_I71A1|NEURAMINIDASE A virus (strain A/Memphis/1/1971
Query: 2 LEECTC 7
+EEC+C
Sbjct: 275 VEECSC 280
>sp|NRAM_I68A5|NEURAMINIDASE A virus (strain A/Korea/426/1968
Query: 2 LEECTC 7
+EEC+C
Sbjct: 275 VEECSC 280
>sp|NRAM_I68A0|NEURAMINIDASE A virus (strain A/Aichi/2/1968
Query: 2 LEECTC 7
+EEC+C
Sbjct: 275 VEECSC 280
117|Sequence|581|590|TCASSDGKDD
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 2 CASSDGKDD 10
C S+ GKDD
Sbjct: 404 CDSTSGKDD 412
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 CASSDGKDD 10
C S+ GKDD
Sbjct: 404 CDSTSGKDD 412
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CASSDGKDD 10
C DG+DD
Sbjct: 281 CECGDGRDD 289
>sp|CAPSD_HASV6|CAPSID polyprotein VP90|Human astrovirus-6 (HAstV-6)
Query: 2 CASSDGKDD 10
C +SD +DD
Sbjct: 696 CCTSDSEDD 704
>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus
Query: 1 TCASSDGKD 9
+C+ DG+D
Sbjct: 139 SCSGDDGRD 147
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 TCASSD 6
TCA+SD
Sbjct: 985 TCATSD 990
>sp|UL141_HCMVM|PROTEIN UL141|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CASSDGKDD 10
C S DG D+
Sbjct: 84 CRSHDGSDE 92
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 TCASSD 6
TCA+SD
Sbjct: 986 TCATSD 991
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 TCASSD 6
TCA+SD
Sbjct: 985 TCATSD 990
>sp|PG060_VARV|PROTEIN OPG060|Variola virus
Query: 2 CASSDGKDD 10
C S+ G DD
Sbjct: 119 CISNRGDDD 127
>sp|PG060_VAR67|PROTEIN OPG060|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 CASSDGKDD 10
C S+ G DD
Sbjct: 119 CISNRGDDD 127
>sp|PG060_VACCP|PROTEIN OPG060|Vaccinia virus (strain L-IVP) (VACV)
Query: 2 CASSDGKDD 10
C S+ G DD
Sbjct: 116 CISNRGDDD 124
>sp|PG060_VACCC|PROTEIN OPG060|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CASSDGKDD 10
C S+ G DD
Sbjct: 116 CISNRGDDD 124
>sp|PG060_MONPV|PROTEIN OPG060|Monkeypox virus (MPXV)
Query: 2 CASSDGKDD 10
C S+ G DD
Sbjct: 116 CISNRGDDD 124
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TCASSD 6
TC SSD
Sbjct: 1124 TCGSSD 1129
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 TCASSD 6
TC SSD
Sbjct: 1124 TCGSSD 1129
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 TCASSD 6
TC SSD
Sbjct: 1124 TCGSSD 1129
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 2 CASSDGKD 9
C SSDG +
Sbjct: 1180 CYSSDGTN 1187
>sp|ORF48_HHV8P|TEGUMENT protein ORF48|Human herpesvirus 8 type P
Query: 1 TCASSDGKDD 10
TC SSD + D
Sbjct: 393 TCDSSDDEYD 402
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 TCASSD 6
TC SSD
Sbjct: 1132 TCGSSD 1137
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 TCASSD 6
TC SSD
Sbjct: 1129 TCGSSD 1134
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 TCASSD 6
TC SSD
Sbjct: 1126 TCGSSD 1131
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TCASSD 6
TC SSD
Sbjct: 1124 TCGSSD 1129
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TCASSD 6
TC SSD
Sbjct: 1124 TCGSSD 1129
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TCASSD 6
TC SSD
Sbjct: 1124 TCGSSD 1129
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TCASSD 6
TC SSD
Sbjct: 1124 TCGSSD 1129
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TCASSD 6
TC SSD
Sbjct: 1124 TCGSSD 1129
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 TCASSD 6
TC SSD
Sbjct: 1129 TCGSSD 1134
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TCASSD 6
TC SSD
Sbjct: 1124 TCGSSD 1129
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 3 ASSDGKDD 10
ASSDG D
Sbjct: 1207 ASSDGTGD 1214
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 2 CASSDGKDD 10
CA+S G D+
Sbjct: 2319 CAASIGDDN 2327
118|Sequence|586|595|DGKDDKELCH
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DGKDDKELCH 10
D +DD+E CH
Sbjct: 44 DCRDDEEFCH 53
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DGKDDKELCH 10
D +DD+E CH
Sbjct: 44 DCRDDEEFCH 53
>sp|VE2_HPV29|REGULATORY protein E2|Human papillomavirus 29
Query: 1 DGKDDKELCH 10
DG + K +CH
Sbjct: 122 DGDETKAMCH 131
>sp|BARF1_EBVG|SECRETED protein BARF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 GKDDKELCH 10
GK+DKE H
Sbjct: 203 GKNDKEEAH 211
>sp|BARF1_EBVB9|SECRETED protein BARF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 GKDDKELCH 10
GK+DKE H
Sbjct: 203 GKNDKEEAH 211
>sp|BARF1_EBVA8|SECRETED protein BARF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 GKDDKELCH 10
GK+DKE H
Sbjct: 203 GKNDKEEAH 211
>sp|TEG1_HHV1F|TEGUMENT protein UL46|Human herpesvirus 1 (strain F)
Query: 5 DKELCH 10
DK +CH
Sbjct: 243 DKHVCH 248
>sp|TEG1_HHV11|TEGUMENT protein UL46|Human herpesvirus 1 (strain 17)
Query: 5 DKELCH 10
DK +CH
Sbjct: 243 DKHVCH 248
>sp|VE2_HPV03|REGULATORY protein E2|Human papillomavirus 3
Query: 1 DGKDDKELCH 10
DG ++K +C+
Sbjct: 122 DGDENKAMCY 131
>sp|SCAF_HHV6Z|CAPSID scaffolding protein|Human herpesvirus 6B (strain Z29)
Query: 1 DGKDDKEL 8
D DDKE+
Sbjct: 424 DNDDDKEM 431
>sp|SCAF_HHV6U|CAPSID scaffolding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 DGKDDKEL 8
D DDKE+
Sbjct: 424 DNDDDKEM 431
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 DGKDDKEL 8
DG+DD L
Sbjct: 2048 DGEDDNTL 2055
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 2 GKDDK 6
GKDDK
Sbjct: 409 GKDDK 413
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 GKDDK 6
GKDDK
Sbjct: 409 GKDDK 413
>sp|VL2_HPV41|MINOR capsid protein L2|Human papillomavirus type 41
Query: 1 DGKDDKE 7
DG++D+E
Sbjct: 442 DGEEDQE 448
>sp|VE2_HPV28|REGULATORY protein E2|Human papillomavirus 28
Query: 1 DGKDDKELCH 10
DG + K +C+
Sbjct: 122 DGDETKSMCY 131
>sp|SPIKE_ADE1A|FIBER protein|Human adenovirus B serotype 11
Query: 2 GKDDKELC 9
G D+ +LC
Sbjct: 104 GTDENKLC 111
>sp|PKG3_ADE12|PACKAGING protein 3|Human adenovirus A serotype 12
Query: 5 DKELCH 10
DKEL H
Sbjct: 314 DKELMH 319
>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)
Query: 3 KDDKELCH 10
K D LCH
Sbjct: 74 KSDGFLCH 81
119|Sequence|591|600|KELCHVCCMK
>sp|AN_HHV6Z|ALKALINE nuclease|Human herpesvirus 6B (strain Z29)
Query: 3 LCHVCCM 9
LCHV CM
Sbjct: 44 LCHVYCM 50
>sp|AN_HHV6U|ALKALINE nuclease|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 LCHVCCM 9
LCHV CM
Sbjct: 44 LCHVYCM 50
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 KELCH 5
KELCH
Sbjct: 1189 KELCH 1193
>sp|UL34_HCMVM|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 KELCHV 6
+ELCHV
Sbjct: 186 RELCHV 191
>sp|UL34_HCMVA|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 KELCHV 6
+ELCHV
Sbjct: 186 RELCHV 191
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 KELCHVCCMK 10
+E C+VC +K
Sbjct: 1669 REWCNVCGIK 1678
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 4 CHVCC 8
CH CC
Sbjct: 1330 CHNCC 1334
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 4 CHVCC 8
CH CC
Sbjct: 1330 CHNCC 1334
>sp|UL34_HCMVT|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 KELCHV 6
+ELCHV
Sbjct: 186 RELCHV 191
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 KELCHVCCMK 10
+E C+VC +K
Sbjct: 1669 REWCNVCGIK 1678
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 4 CHVCC 8
CH CC
Sbjct: 1335 CHNCC 1339
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 LCHVCC 8
+CHV C
Sbjct: 146 ICHVAC 151
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 3 LCHVCC 8
+CHV C
Sbjct: 146 ICHVAC 151
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 KELCHVCCM 9
+E C++ CM
Sbjct: 243 RETCNLNCM 251
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 KELCHVCCM 9
+E C++ CM
Sbjct: 243 RETCNLNCM 251
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 KELCHVCCM 9
+E C++ CM
Sbjct: 243 RETCNLNCM 251
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 3 LCHVCCMK 10
+C +C +K
Sbjct: 1651 ICEICALK 1658
>sp|NCAP_LASSJ|NUCLEOPROTEIN virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 1 KELCHV 6
K+LCH+
Sbjct: 503 KDLCHM 508
>sp|NCAP_LASSG|NUCLEOPROTEIN virus (strain GA391) (LASV)
Query: 1 KELCHV 6
K+LCH+
Sbjct: 504 KDLCHM 509
>sp|VP3_ROTYO|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8]) (RV-A)
Query: 6 VCCMK 10
VCC+K
Sbjct: 379 VCCVK 383
>sp|VP3_ROTWI|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 6 VCCMK 10
VCC+K
Sbjct: 379 VCCVK 383
>sp|VP3_ROTHW|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8])
Query: 6 VCCMK 10
VCC+K
Sbjct: 379 VCCVK 383
>sp|VP3_ROTHU|PROTEIN VP3|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11]) (RV-A)
Query: 6 VCCMK 10
VCC+K
Sbjct: 379 VCCVK 383
>sp|VP3_ROTHT|PROTEIN VP3|Rotavirus A (strain RVA/Human/United Kingdom/ST3/1975/G4P2A[6])
Query: 6 VCCMK 10
VCC+K
Sbjct: 379 VCCVK 383
>sp|VP3_ROTHP|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/P/1974/G3P1A[8])
Query: 6 VCCMK 10
VCC+K
Sbjct: 379 VCCVK 383
>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)
Query: 6 VCCMK 10
VCC+K
Sbjct: 379 VCCVK 383
>sp|VP3_ROTH7|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 6 VCCMK 10
VCC+K
Sbjct: 379 VCCVK 383
>sp|VP3_ROTH6|PROTEIN VP3|Rotavirus A (strain RVA/Human/Indonesia/69M/1980/G8P4[10])
Query: 6 VCCMK 10
VCC+K
Sbjct: 379 VCCVK 383
>sp|VP3_ROTH3|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9]) (RV-A)
Query: 6 VCCMK 10
VCC+K
Sbjct: 379 VCCVK 383
>sp|VP3_ROTAD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/D/1974/G1P1A[8])
Query: 6 VCCMK 10
VCC+K
Sbjct: 379 VCCVK 383
>sp|VP3_ROT41|PROTEIN VP3|Rotavirus A (isolate RVA/Human/Belgium/B4106/2000/G3P11[14])
Query: 6 VCCMK 10
VCC+K
Sbjct: 379 VCCVK 383
>sp|E1A_ADE07|EARLY E1A protein|Human adenovirus B serotype 7
Query: 3 LCHVCCMK 10
LC +C M+
Sbjct: 179 LCSLCYMR 186
>sp|V_PI4HB|NON-STRUCTURAL protein V|Human parainfluenza 4b virus (strain
Query: 2 ELCHVCC 8
E C+ CC
Sbjct: 195 EWCNPCC 201
>sp|V_PI4HA|NON-STRUCTURAL protein V|Human parainfluenza 4a virus (strain
Query: 2 ELCHVCC 8
E C+ CC
Sbjct: 195 EWCNPCC 201
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 4 CHVCCM 9
C++ CM
Sbjct: 541 CYIMCM 546
>sp|NSS_RVFVZ|NON-STRUCTURAL protein S|Rift valley fever virus (strain
Query: 2 ELCHVCCMK 10
E+ HV C++
Sbjct: 188 EVAHVQCVR 196
>sp|VP3_ROTHS|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4]) (RV-A)
Query: 6 VCCMK 10
+CC+K
Sbjct: 379 ICCVK 383
>sp|VP3_ROTHL|PROTEIN VP3|Rotavirus A (strain RVA/Human/Philippines/L26/1987/G12P1B[4])
Query: 6 VCCMK 10
+CC+K
Sbjct: 379 ICCVK 383
>sp|VP3_ROTHD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/DS-1/1976/G2P1B[4])
Query: 6 VCCMK 10
+CC+K
Sbjct: 379 ICCVK 383
>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 5 HVCCM 9
VCCM
Sbjct: 43 QVCCM 47
>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)
Query: 5 HVCCM 9
VCCM
Sbjct: 43 QVCCM 47
>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann
Query: 5 HVCCM 9
VCCM
Sbjct: 43 QVCCM 47
120|Sequence|596|605|VCCMKKMDPS
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 3 CMKKMDP 9
C K +DP
Sbjct: 51 CFKNLDP 57
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 3 CMKKMDP 9
C K +DP
Sbjct: 51 CFKNLDP 57
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 3 CMKKMD 8
C+KK+D
Sbjct: 153 CLKKVD 158
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 3 CMKKMD 8
C+KK+D
Sbjct: 154 CLKKVD 159
>sp|NCAP_MACHU|NUCLEOPROTEIN virus (MACV)
Query: 4 MKKMDPS 10
+KK+DP+
Sbjct: 368 VKKLDPT 374
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 CMKKMDPS 10
C+K DP+
Sbjct: 25 CLKYCDPN 32
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 CMKKMDPS 10
C+K DP+
Sbjct: 25 CLKYCDPN 32
121|Sequence|601|610|KMDPSTCAST
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 MDPSTCAST 10
+DP TC S+
Sbjct: 1128 LDPCTCGSS 1136
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 1 KMDPSTCAS 9
K+DP C S
Sbjct: 8 KLDPKECCS 16
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 MDPSTCAST 10
+ PS C ST
Sbjct: 1851 LQPSECLST 1859
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 3 DPSTCAS 9
DP CAS
Sbjct: 543 DPEFCAS 549
>sp|AN_EBVG|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 MDPSTC 7
+DP+TC
Sbjct: 398 LDPATC 403
>sp|AN_EBVB9|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 MDPSTC 7
+DP+TC
Sbjct: 398 LDPATC 403
>sp|AN_EBVA8|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 MDPSTC 7
+DP+TC
Sbjct: 398 LDPATC 403
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 3 DPSTCAS 9
DP CAS
Sbjct: 543 DPEFCAS 549
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 3 DPSTCAS 9
DP CAS
Sbjct: 543 DPEFCAS 549
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 KMDPSTC 7
++DP+TC
Sbjct: 1146 ELDPNTC 1152
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 KMDPSTC 7
++DP+TC
Sbjct: 1146 ELDPNTC 1152
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 KMDPSTC 7
++DP+TC
Sbjct: 1146 ELDPNTC 1152
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 KMDPSTC 7
++DP+TC
Sbjct: 1146 ELDPNTC 1152
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 KMDPSTC 7
++DP+TC
Sbjct: 1146 ELDPNTC 1152
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 KMDPSTC 7
++DP+TC
Sbjct: 1146 ELDPNTC 1152
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 KMDPSTC 7
++DP+TC
Sbjct: 1146 ELDPNTC 1152
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 2 MDPSTCA 8
+DP TC
Sbjct: 658 LDPYTCG 664
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 2 MDPSTCA 8
+DP TC
Sbjct: 658 LDPYTCG 664
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 MDPSTCAST 10
+ P TC+ST
Sbjct: 2047 VGPKTCSST 2055
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 MDPSTCAST 10
+DP TC +
Sbjct: 1124 LDPCTCGAV 1132
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 MDPSTCAST 10
+DP TC +
Sbjct: 1124 LDPCTCGAV 1132
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 MDPSTCAST 10
+DP TC +
Sbjct: 1124 LDPCTCGAV 1132
122|Sequence|606|615|TCASTGSVQW
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 1 TCASTGSVQW 10
TC T S+ W
Sbjct: 480 TCLETESINW 489
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 1 TCASTGSVQW 10
TC T S+ W
Sbjct: 480 TCLETESINW 489
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 4 STGSVQW 10
S G +QW
Sbjct: 1745 SQGEIQW 1751
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 4 STGSVQW 10
S G +QW
Sbjct: 1744 SQGEIQW 1750
>sp|GH_HHV8P|ENVELOPE glycoprotein H|Human herpesvirus 8 type P
Query: 1 TCASTGSV 8
TC +TG++
Sbjct: 19 TCGATGAL 26
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 4 STGSVQW 10
S G +QW
Sbjct: 1747 SQGEIQW 1753
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 4 STGSVQW 10
S G +QW
Sbjct: 1744 SQGEIQW 1750
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 4 STGSVQW 10
S G +QW
Sbjct: 1747 SQGEIQW 1753
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 4 STGSVQW 10
S G +QW
Sbjct: 1745 SQGEIQW 1751
>sp|TRX2_HCMVM|TRIPLEX capsid protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 TCASTGSVQW 10
T +TG V W
Sbjct: 93 TVLNTGPVTW 102
>sp|TRX2_HCMVA|TRIPLEX capsid protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 TCASTGSVQW 10
T +TG V W
Sbjct: 93 TVLNTGPVTW 102
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 4 STGSVQW 10
S G +QW
Sbjct: 1752 SQGEIQW 1758
>sp|E434_ADE09|EARLY E4 34 kDa protein|Human adenovirus D serotype 9
Query: 2 CASTGSVQ 9
C+S GS+Q
Sbjct: 116 CSSPGSLQ 123
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 TCASTG 6
TCA+TG
Sbjct: 193 TCATTG 198
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 CASTGSV 8
C STGSV
Sbjct: 1674 CLSTGSV 1680
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 CASTGSV 8
C STGSV
Sbjct: 1674 CLSTGSV 1680
>sp|E434_ADE02|EARLY 4 ORF6 protein|Human adenovirus C serotype 2
Query: 2 CASTGSVQ 9
C+S GS+Q
Sbjct: 126 CSSPGSLQ 133
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 1 TCASTGSVQW 10
TC T ++ W
Sbjct: 480 TCLETENINW 489
123|Sequence|611|620|GSVQWSRHFS
>sp|NSP1_ROTHD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 SVQWSRHF 9
S QW HF
Sbjct: 130 STQWYNHF 137
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 GSVQWS 6
GSV+WS
Sbjct: 256 GSVEWS 261
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 GSVQWS 6
GSV+WS
Sbjct: 256 GSVEWS 261
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 GSVQWS 6
GSV+WS
Sbjct: 256 GSVEWS 261
>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)
Query: 5 WSRHF 9
W RHF
Sbjct: 578 WCRHF 582
>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)
Query: 5 WSRHF 9
W RHF
Sbjct: 578 WCRHF 582
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 3 VQWSRH 8
++WS+H
Sbjct: 1950 IEWSKH 1955
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 3 VQWSRH 8
++WS+H
Sbjct: 1950 IEWSKH 1955
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 3 VQWSRH 8
++WS+H
Sbjct: 1950 IEWSKH 1955
>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)
Query: 5 WSRHF 9
W RHF
Sbjct: 578 WCRHF 582
>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 5 WSRHF 9
W RHF
Sbjct: 578 WCRHF 582
>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 5 WSRHF 9
W RHF
Sbjct: 578 WCRHF 582
>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)
Query: 5 WSRHF 9
W RHF
Sbjct: 578 WCRHF 582
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 SVQWSR 7
SVQW R
Sbjct: 137 SVQWQR 142
>sp|VIL6_HHV8P|VIRAL interleukin-6 homolog|Human herpesvirus 8 type P
Query: 5 WSRHFS 10
W RHF+
Sbjct: 167 WVRHFA 172
>sp|NSP1_ROTH6|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 4 QWSRHF 9
QW HF
Sbjct: 132 QWYNHF 137
>sp|GL_HHV1K|ENVELOPE glycoprotein L|Human herpesvirus 1 (strain KOS)
Query: 2 SVQWSRH 8
+V W RH
Sbjct: 81 TVLWDRH 87
>sp|GL_HHV11|ENVELOPE glycoprotein L|Human herpesvirus 1 (strain 17)
Query: 2 SVQWSRH 8
+V W RH
Sbjct: 81 TVLWDRH 87
>sp|PORTL_HHV7J|PORTAL protein|Human herpesvirus 7 (strain JI)
Query: 2 SVQWSRHF 9
+ +W RH
Sbjct: 110 NAEWQRHL 117
>sp|IR12_HCMVA|UNCHARACTERIZED protein IRL12|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 SVQWSRHFS 10
SV W RH++
Sbjct: 219 SVAWIRHYN 227
>sp|NCAP_CCHFV|NUCLEOPROTEIN hemorrhagic fever virus (isolate
Query: 3 VQWSRHF 9
V+W R F
Sbjct: 198 VEWCREF 204
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 4 QWSRHFS 10
Q+S HFS
Sbjct: 230 QYSSHFS 236
>sp|LF1_EBVG|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 VQWSRHF 9
V W RH+
Sbjct: 177 VAWYRHY 183
>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human
Query: 4 QWSRHFS 10
Q+S HFS
Sbjct: 231 QYSSHFS 237
>sp|GLYCO_DUVV|GLYCOPROTEIN virus (DUVV)
Query: 1 GSVQWSRHF 9
G +W R+F
Sbjct: 452 GLPEWKRYF 460
>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 4 QWSRHFS 10
Q+S HFS
Sbjct: 231 QYSSHFS 237
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 GSVQW 5
G+VQW
Sbjct: 1912 GAVQW 1916
>sp|RL12_HCMVM|UNCHARACTERIZED protein RL12|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 SVQWSRHFS 10
+V W RH++
Sbjct: 217 NVVWYRHYN 225
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GSVQW 5
G+VQW
Sbjct: 1911 GAVQW 1915
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GSVQW 5
G+VQW
Sbjct: 1911 GAVQW 1915
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 GSVQW 5
G+VQW
Sbjct: 1912 GAVQW 1916
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GSVQW 5
G+VQW
Sbjct: 1911 GAVQW 1915
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GSVQW 5
G+VQW
Sbjct: 1911 GAVQW 1915
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GSVQW 5
G+VQW
Sbjct: 1911 GAVQW 1915
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GSVQW 5
G+VQW
Sbjct: 1911 GAVQW 1915
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GSVQW 5
G+VQW
Sbjct: 1911 GAVQW 1915
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 GSVQW 5
G+VQW
Sbjct: 1915 GAVQW 1919
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 GSVQW 5
G+VQW
Sbjct: 1915 GAVQW 1919
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 GSVQW 5
G+VQW
Sbjct: 1915 GAVQW 1919
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 GSVQW 5
G+VQW
Sbjct: 1915 GAVQW 1919
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 GSVQW 5
G+VQW
Sbjct: 1915 GAVQW 1919
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 GSVQW 5
G+VQW
Sbjct: 1911 GAVQW 1915
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 GSVQW 5
G+VQW
Sbjct: 1911 GAVQW 1915
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 GSVQW 5
G+VQW
Sbjct: 1911 GAVQW 1915
124|Sequence|616|625|SRHFSGRTIT
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 3 HFSGRTI 9
HFSGR +
Sbjct: 2087 HFSGRDV 2093
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 2 RHFSGRTIT 10
RH + RTI+
Sbjct: 790 RHVNDRTIS 798
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 HFSGRT 8
HF+G+T
Sbjct: 2137 HFAGKT 2142
>sp|VE2_HPV23|REGULATORY protein E2|Human papillomavirus 23
Query: 1 SRHFSGR 7
SRH SGR
Sbjct: 331 SRHSSGR 337
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 3 HFSGRT 8
HF+G+T
Sbjct: 2137 HFAGKT 2142
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 HFSGRT 8
H+ GRT
Sbjct: 6473 HYDGRT 6478
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 HFSGRT 8
H+ GRT
Sbjct: 6523 HYDGRT 6528
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 3 HFSGRTI 9
+F+GRT+
Sbjct: 1853 NFTGRTV 1859
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 HFSGRTI 9
HF GR +
Sbjct: 778 HFKGRLV 784
125|Sequence|621|630|GRTITLQPGS
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 GRTITLQPGS 10
RTI+ +P S
Sbjct: 347 NRTISFKPNS 356
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 5 TLQPGS 10
TLQPG+
Sbjct: 416 TLQPGA 421
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 RTITLQPG 9
+ ITL PG
Sbjct: 286 KKITLSPG 293
>sp|TERM_ADE12|PRETERMINAL protein|Human adenovirus A serotype 12
Query: 3 TITLQPGS 10
T T+QPG+
Sbjct: 75 TETVQPGT 82
126|Sequence|626|635|LQPGSPCNDF
>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P
Query: 1 LQPGSPCN 8
LQP SPC
Sbjct: 46 LQPSSPCR 53
>sp|MAT_INCTA|POLYPROTEIN p42|Influenza C virus (strain C/Taylor/1233/1947)
Query: 2 QPGSPCN 8
QP S CN
Sbjct: 255 QPASACN 261
>sp|MAT_INCJJ|POLYPROTEIN p42|Influenza C virus (strain C/JJ/1950)
Query: 2 QPGSPCN 8
QP S CN
Sbjct: 255 QPASACN 261
>sp|MAT_INCHY|POLYPROTEIN p42|Influenza C virus (strain C/Hyogo/1/1983)
Query: 2 QPGSPCN 8
QP S CN
Sbjct: 255 QPASACN 261
>sp|MAT_INCAA|POLYPROTEIN p42|Influenza C virus (strain C/Ann
Query: 2 QPGSPCN 8
QP S CN
Sbjct: 255 QPASACN 261
>sp|PG095_VARV|ENTRY-FUSION complex associated protein OPG095|Variola virus
Query: 3 PGSPCN 8
PGSP N
Sbjct: 140 PGSPTN 145
>sp|PG095_VAR67|ENTRY-FUSION complex associated protein OPG095|Variola virus (isolate
Query: 3 PGSPCN 8
PGSP N
Sbjct: 140 PGSPTN 145
>sp|PG095_VACCC|ENTRY-FUSION complex associated protein OPG095|Vaccinia virus (strain
Query: 3 PGSPCN 8
PGSP N
Sbjct: 140 PGSPTN 145
>sp|PG095_VACCA|ENTRY-FUSION complex associated protein OPG095|Vaccinia virus (strain Ankara)
Query: 3 PGSPCN 8
PGSP N
Sbjct: 140 PGSPTN 145
>sp|PG095_MONPV|ENTRY-FUSION complex associated protein OPG095|Monkeypox virus (MPXV)
Query: 3 PGSPCN 8
PGSP N
Sbjct: 140 PGSPTN 145
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 5 SPCNDF 10
S CNDF
Sbjct: 545 SACNDF 550
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 5 SPCNDF 10
S CNDF
Sbjct: 555 SACNDF 560
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 5 SPCNDF 10
S CNDF
Sbjct: 555 SACNDF 560
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 5 SPCNDF 10
S CNDF
Sbjct: 555 SACNDF 560
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 5 SPCNDF 10
S CNDF
Sbjct: 545 SACNDF 550
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 5 SPCNDF 10
S CNDF
Sbjct: 556 SACNDF 561
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 5 SPCNDF 10
S CNDF
Sbjct: 556 SACNDF 561
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 4 GSPCNDF 10
S CNDF
Sbjct: 544 ASACNDF 550
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 5 SPCNDF 10
S CNDF
Sbjct: 555 SACNDF 560
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 5 SPCNDF 10
S CNDF
Sbjct: 545 SACNDF 550
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 5 SPCNDF 10
S CNDF
Sbjct: 546 SACNDF 551
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 5 SPCNDF 10
S CNDF
Sbjct: 545 SACNDF 550
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 4 GSPCNDF 10
S CNDF
Sbjct: 544 ASACNDF 550
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 5 SPCNDF 10
S CNDF
Sbjct: 546 SACNDF 551
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 5 SPCNDF 10
S CNDF
Sbjct: 546 SACNDF 551
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 5 SPCNDF 10
S CNDF
Sbjct: 548 SACNDF 553
>sp|NCAP_MUMP1|NUCLEOPROTEIN virus (strain SBL-1) (MuV)
Query: 3 PGSPCNDF 10
PG P N F
Sbjct: 410 PGGPVNPF 417
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 5 SPCNDF 10
S CNDF
Sbjct: 546 SACNDF 551
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 5 SPCNDF 10
S CNDF
Sbjct: 545 SACNDF 550
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 5 SPCNDF 10
S CNDF
Sbjct: 547 SACNDF 552
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 5 SPCNDF 10
S CNDF
Sbjct: 545 SACNDF 550
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 5 SPCNDF 10
S CNDF
Sbjct: 547 SACNDF 552
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 5 SPCNDF 10
S CNDF
Sbjct: 547 SACNDF 552
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 5 SPCNDF 10
S CNDF
Sbjct: 547 SACNDF 552
>sp|US16_HCMVM|PROTEIN US16|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 QPGSPCN 8
+PG PC+
Sbjct: 78 RPGFPCH 84
>sp|NCAP_MUMPZ|NUCLEOPROTEIN virus genotype N (strain
Query: 3 PGSPCNDF 10
PG P N F
Sbjct: 410 PGGPVNPF 417
>sp|NCAP_MUMPJ|NUCLEOPROTEIN virus genotype A (strain
Query: 3 PGSPCNDF 10
PG P N F
Sbjct: 410 PGGPVNPF 417
>sp|US16_HCMVA|UNCHARACTERIZED protein HVLF2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 QPGSPCN 8
+PG PC+
Sbjct: 78 RPGFPCH 84
>sp|NCAP_MUMPM|NUCLEOPROTEIN virus genotype B (strain
Query: 3 PGSPCNDF 10
PG P N F
Sbjct: 410 PGGPVNPF 417
>sp|NCAP_MUMPE|NUCLEOPROTEIN virus (strain Enders) (MuV)
Query: 3 PGSPCNDF 10
PG P N F
Sbjct: 410 PGGPVNPF 417
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 4 GSPCNDF 10
S CNDF
Sbjct: 546 ASACNDF 552
>sp|GPX_MCV1|GLUTATHIONE peroxidase|Molluscum contagiosum virus subtype 1
Query: 4 GSPCNDF 10
G PCN F
Sbjct: 90 GFPCNQF 96
>sp|SPIKE_ADE04|FIBER protein|Human adenovirus E serotype 4
Query: 1 LQPGSPCN 8
L PG PC+
Sbjct: 49 LGPGRPCH 56
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 4 GSPCND 9
G PC D
Sbjct: 167 GHPCED 172
>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52
Query: 4 GSPCND 9
G+PCN+
Sbjct: 201 GTPCNN 206
>sp|VL1_HPV48|MAJOR capsid protein L1|Human papillomavirus type 48
Query: 6 PCNDF 10
PCND
Sbjct: 173 PCNDL 177
>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40
Query: 4 GSPCN 8
G+PCN
Sbjct: 170 GTPCN 174
>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35
Query: 4 GSPCN 8
G+PCN
Sbjct: 172 GTPCN 176
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 4 GSPCN 8
G+PCN
Sbjct: 170 GTPCN 174
127|Sequence|631|640|PCNDFRGYCD
>sp|OBP_HHV6Z|REPLICATION origin-binding protein|Human herpesvirus 6B (strain Z29)
Query: 2 CNDFRGYC 9
C DFRG C
Sbjct: 375 CIDFRGKC 382
Query: 4 DFRGYCD 10
DF YCD
Sbjct: 99 DFELYCD 105
>sp|OBP_HHV6U|REPLICATION origin-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 CNDFRGYC 9
C DFRG C
Sbjct: 375 CIDFRGKC 382
Query: 4 DFRGYCD 10
DF YCD
Sbjct: 99 DFELYCD 105
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 2 CNDFRGYCD 10
C F+G CD
Sbjct: 454 CRRFKGRCD 462
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 2 CNDFRGYCD 10
C F+G CD
Sbjct: 438 CRRFKGRCD 446
>sp|CEP2_HHV8P|CYTOPLASMIC envelopment protein 2|Human herpesvirus 8 type P
Query: 3 NDFRGYC 9
N FRGYC
Sbjct: 220 NVFRGYC 226
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 CNDFRG 7
CN FRG
Sbjct: 2493 CNIFRG 2498
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 CNDFRG 7
CN FRG
Sbjct: 2493 CNIFRG 2498
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 CNDFRG 7
CN FRG
Sbjct: 2489 CNIFRG 2494
>sp|UL79_HHV7J|PROTEIN U52|Human herpesvirus 7 (strain JI)
Query: 3 NDFRGYC 9
NDF+ +C
Sbjct: 223 NDFKVFC 229
>sp|UL79_HHV6Z|PROTEIN U52|Human herpesvirus 6B (strain Z29)
Query: 3 NDFRGYC 9
NDF+ +C
Sbjct: 223 NDFKVFC 229
>sp|UL79_HHV6U|PROTEIN U52|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 NDFRGYC 9
NDF+ +C
Sbjct: 223 NDFKVFC 229
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 2 CNDFRGYCD 10
C+D GY D
Sbjct: 207 CDDCNGYTD 215
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 CNDFRG 7
CN FRG
Sbjct: 2480 CNLFRG 2485
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 3 NDFRGYC 9
+ FRG+C
Sbjct: 1780 SSFRGHC 1786
>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 3 NDFRGYC 9
+D+RG C
Sbjct: 199 SDYRGIC 205
>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 NDFRGYC 9
+D+RG C
Sbjct: 199 SDYRGIC 205
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 2 CNDFRGY 8
C+D+ GY
Sbjct: 1336 CDDYTGY 1342
>sp|MATRX_ISFV|MATRIX protein|Isfahan virus (ISFV)
Query: 4 DFRGY 8
D+RGY
Sbjct: 94 DYRGY 98
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 2 CNDF 5
CNDF
Sbjct: 557 CNDF 560
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 2 CNDF 5
CNDF
Sbjct: 557 CNDF 560
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 2 CNDF 5
CNDF
Sbjct: 557 CNDF 560
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 2 CNDF 5
CNDF
Sbjct: 557 CNDF 560
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 2 CNDF 5
CNDF
Sbjct: 558 CNDF 561
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 2 CNDF 5
CNDF
Sbjct: 558 CNDF 561
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 2 CNDF 5
CNDF
Sbjct: 547 CNDF 550
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 CNDF 5
CNDF
Sbjct: 548 CNDF 551
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 NDFRGYC 9
ND R YC
Sbjct: 480 NDQRPYC 486
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 2 CNDF 5
CNDF
Sbjct: 547 CNDF 550
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 2 CNDF 5
CNDF
Sbjct: 548 CNDF 551
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 2 CNDF 5
CNDF
Sbjct: 547 CNDF 550
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 2 CNDF 5
CNDF
Sbjct: 547 CNDF 550
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 2 CNDF 5
CNDF
Sbjct: 547 CNDF 550
>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)
Query: 5 FRGYC 9
+RGYC
Sbjct: 72 WRGYC 76
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 2 CNDF 5
CNDF
Sbjct: 547 CNDF 550
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 CNDF 5
CNDF
Sbjct: 550 CNDF 553
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 2 CNDF 5
CNDF
Sbjct: 549 CNDF 552
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 2 CNDF 5
CNDF
Sbjct: 547 CNDF 550
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 CNDF 5
CNDF
Sbjct: 547 CNDF 550
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 2 CNDF 5
CNDF
Sbjct: 549 CNDF 552
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 2 CNDF 5
CNDF
Sbjct: 549 CNDF 552
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 CNDF 5
CNDF
Sbjct: 548 CNDF 551
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 2 CNDF 5
CNDF
Sbjct: 549 CNDF 552
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 4 DFRGY 8
DF+GY
Sbjct: 832 DFKGY 836
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 CNDF 5
CNDF
Sbjct: 548 CNDF 551
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 2 CNDF 5
CNDF
Sbjct: 549 CNDF 552
>sp|IL10H_EBVG|VIRAL interleukin-10 homolog|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 DFRGY 8
DF+GY
Sbjct: 66 DFKGY 70
>sp|IL10H_EBVB9|VIRAL interleukin-10 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 DFRGY 8
DF+GY
Sbjct: 66 DFKGY 70
>sp|IL10H_EBVA8|VIRAL interleukin-10 homolog|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 DFRGY 8
DF+GY
Sbjct: 66 DFKGY 70
128|Sequence|636|645|RGYCDVFMRC
>sp|PG049_VACCC|PROTEIN OPG049|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 RGYCDVFMRC 10
R YC+V +RC
Sbjct: 127 RNYCEVKIRC 136
>sp|PG049_VACCP|PROTEIN OPG049|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 RGYCDVFMRC 10
R YC+V +RC
Sbjct: 127 RNYCEVKIRC 136
>sp|PG049_MONPV|PROTEIN OPG049|Monkeypox virus (MPXV)
Query: 1 RGYCDVFMRC 10
R YC+V +RC
Sbjct: 127 RNYCEVKIRC 136
>sp|PG049_VAR67|PROTEIN OPG049|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 RGYCDVFMRC 10
R YC+V +RC
Sbjct: 127 RNYCEVKIRC 136
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 4 CDVFMRC 10
C+ F+RC
Sbjct: 1429 CETFLRC 1435
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 4 CDVFMRC 10
C+ F+RC
Sbjct: 1343 CETFLRC 1349
>sp|BET_FOAMV|PROTEIN Bet|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 GYCDVFM 8
GYCD F+
Sbjct: 466 GYCDPFI 472
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 4 CDVFMRC 10
CDV RC
Sbjct: 911 CDVIARC 917
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 4 CDVFMRC 10
CDV RC
Sbjct: 900 CDVIARC 906
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 4 CDVFMRC 10
CDV RC
Sbjct: 917 CDVIARC 923
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RGYCDVFMRC 10
R Y D F +C
Sbjct: 294 RDYVDRFFKC 303
>sp|GAG_HV1SE|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RGYCDVFMRC 10
R Y D F +C
Sbjct: 294 RDYVDRFFKC 303
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 4 CDVFMRC 10
CD+ RC
Sbjct: 901 CDIIARC 907
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 4 CDVFMRC 10
CD+ RC
Sbjct: 901 CDIIARC 907
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 4 CDVFMRC 10
CD+ RC
Sbjct: 898 CDIIARC 904
>sp|VE6_HPV31|PROTEIN E6|Human papillomavirus 31
Query: 1 RGYCDVFMRC 10
+G CD+ +RC
Sbjct: 94 KGICDLLIRC 103
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 GYCDVFMRC 10
G+C V RC
Sbjct: 88 GFCPVEPRC 96
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 GYCDVFMRC 10
G+C V RC
Sbjct: 88 GFCPVEPRC 96
>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human
Query: 3 YCDVFMR 9
Y D++MR
Sbjct: 494 YMDIYMR 500
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 3 YCDVFMRC 10
YC VF+ C
Sbjct: 765 YCLVFICC 772
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 4 CDVFMRC 10
CD RC
Sbjct: 912 CDTIARC 918
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 4 CDVFMRC 10
CD RC
Sbjct: 912 CDTIARC 918
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 4 CDVFMRC 10
CD RC
Sbjct: 912 CDTIARC 918
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 4 CDVFMRC 10
CD RC
Sbjct: 910 CDTIARC 916
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 4 CDVFMRC 10
CD RC
Sbjct: 909 CDTIARC 915
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 4 CDVFMRC 10
CD RC
Sbjct: 909 CDTIARC 915
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 4 CDVFMRC 10
CD RC
Sbjct: 919 CDTIARC 925
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 4 CDVFMRC 10
CD RC
Sbjct: 907 CDTIARC 913
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 4 CDVFMRC 10
CD RC
Sbjct: 912 CDTIARC 918
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 4 CDVFMRC 10
CD RC
Sbjct: 900 CDTIARC 906
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 4 CDVFMRC 10
CD RC
Sbjct: 901 CDTIARC 907
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 4 CDVFMRC 10
CD RC
Sbjct: 899 CDTIARC 905
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 4 CDVFMRC 10
CD RC
Sbjct: 899 CDTIARC 905
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 4 CDVFMRC 10
CD RC
Sbjct: 903 CDTIARC 909
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 4 CDVFMRC 10
CD RC
Sbjct: 912 CDTIARC 918
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 4 CDVFMRC 10
CD RC
Sbjct: 912 CDTIARC 918
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 3 YCDVFMR 9
Y D++MR
Sbjct: 514 YMDIYMR 520
>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain
Query: 4 CDVFM 8
CDV+M
Sbjct: 160 CDVYM 164
>sp|UL59_HCMVA|UNCHARACTERIZED protein UL59|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RGYCDVFMR 9
RG+ VF+R
Sbjct: 11 RGFYSVFLR 19
>sp|DYR_HHV8P|PUTATIVE Dihydrofolate reductase|Human herpesvirus 8 type P
Query: 4 CDVFM 8
CDVF+
Sbjct: 144 CDVFL 148
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 RGYCDV 6
+G+CD+
Sbjct: 4340 KGFCDL 4345
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 RGYCDV 6
+G+CD+
Sbjct: 4317 KGFCDL 4322
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 RGYCDV 6
+G+CD+
Sbjct: 4340 KGFCDL 4345
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 RGYCDV 6
+G+CD+
Sbjct: 4317 KGFCDL 4322
129|Sequence|641|650|VFMRCRLVDA
>sp|SPI2_CWPXB|SERINE proteinase inhibitor 2|Cowpox virus (strain Brighton Red)
Query: 2 FMRCRLVDA 10
F CR VDA
Sbjct: 90 FTDCRTVDA 98
>sp|PG056_VACCC|PROTEIN OPG056|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 FMRCRLVDA 10
F RC +VD+
Sbjct: 162 FSRCTIVDS 170
>sp|PG056_VACCA|PROTEIN OPG056|Vaccinia virus (strain Ankara) (VACV)
Query: 2 FMRCRLVDA 10
F RC +VD+
Sbjct: 162 FSRCTIVDS 170
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 1 VFMRCRLVD 9
V +RCR VD
Sbjct: 250 VALRCRNVD 258
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 1 VFMRCRLVD 9
V +RCR VD
Sbjct: 250 VALRCRNVD 258
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 VFMRCRLVD 9
V +RCR VD
Sbjct: 250 VALRCRNVD 258
>sp|SPI2_VARV|SERINE proteinase inhibitor 2|Variola virus
Query: 2 FMRCRLVDA 10
F CR +DA
Sbjct: 93 FTDCRTIDA 101
>sp|SPI2_VAR67|SERINE proteinase inhibitor 2|Variola virus (isolate
Query: 2 FMRCRLVDA 10
F CR +DA
Sbjct: 93 FTDCRTIDA 101
>sp|SPI2_MONPV|SERINE proteinase inhibitor 2|Monkeypox virus (MPXV)
Query: 2 FMRCRLVDA 10
F CR +DA
Sbjct: 93 FTDCRTIDA 101
>sp|SPI2A_VACCC|PUTATIVE serine proteinase inhibitor 2|Vaccinia virus (strain Copenhagen)
Query: 2 FMRCRLVDA 10
F CR +DA
Sbjct: 83 FTDCRTIDA 91
>sp|PG056_VACCP|PROTEIN OPG056|Vaccinia virus (strain L-IVP) (VACV)
Query: 2 FMRCRLVDA 10
F RC +VD+
Sbjct: 162 FPRCTIVDS 170
>sp|TRM1_HHV7J|TRIPARTITE terminase subunit 1|Human herpesvirus 7 (strain JI)
Query: 5 CRLVD 9
CRLVD
Sbjct: 367 CRLVD 371
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 3 MRCRLVD 9
M+C LVD
Sbjct: 816 MKCWLVD 822
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 CRLVDA 10
C LVDA
Sbjct: 1016 CNLVDA 1021
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 CRLVDA 10
C LVDA
Sbjct: 1016 CNLVDA 1021
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 CRLVDA 10
C LVDA
Sbjct: 1016 CNLVDA 1021
130|Sequence|646|655|RLVDADGPLA
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 1 RLVDADGPL 9
RLVDAD PL
Sbjct: 838 RLVDADDPL 846
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 RLVDADGPL 9
RLVDAD PL
Sbjct: 838 RLVDADDPL 846
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 1 RLVDADGPL 9
RLVDAD PL
Sbjct: 838 RLVDADDPL 846
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 1 RLVDADGPL 9
RLVDAD PL
Sbjct: 838 RLVDADDPL 846
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 1 RLVDADGPL 9
RLVDAD PL
Sbjct: 838 RLVDADDPL 846
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 1 RLVDADGPL 9
RLVDAD PL
Sbjct: 838 RLVDADDPL 846
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 1 RLVDADGPL 9
RLVDAD PL
Sbjct: 838 RLVDADDPL 846
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 1 RLVDADGPL 9
RLVDAD PL
Sbjct: 838 RLVDADDPL 846
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 1 RLVDADGPL 9
RLVDAD PL
Sbjct: 838 RLVDADDPL 846
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 RLVDADGP 8
R+VD GP
Sbjct: 383 RIVDTPGP 390
>sp|GH_HHV6Z|ENVELOPE glycoprotein H|Human herpesvirus 6B (strain Z29)
Query: 4 DADGPL 9
D DGPL
Sbjct: 611 DIDGPL 616
>sp|GH_HHV6U|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 DADGPL 9
D DGPL
Sbjct: 611 DIDGPL 616
>sp|GH_HHV6G|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain GS)
Query: 4 DADGPL 9
D DGPL
Sbjct: 611 DIDGPL 616
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 4 DADGPL 9
+ADGPL
Sbjct: 592 EADGPL 597
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 LVDADGPL 9
L+D GP+
Sbjct: 37 LIDGKGPI 44
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 LVDADGPL 9
L+D GP+
Sbjct: 37 LIDGKGPI 44
>sp|IE2_HHV6U|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LVDADGPLA 10
++D D P++
Sbjct: 1425 IIDGDNPIS 1433
>sp|IE2_HHV6G|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain GS)
Query: 2 LVDADGPLA 10
++D D P++
Sbjct: 1439 IIDGDNPIS 1447
>sp|UL34_HCMVM|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 DADGPLA 10
+ DGPLA
Sbjct: 370 EEDGPLA 376
>sp|UL34_HCMVT|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 4 DADGPLA 10
+ DGPLA
Sbjct: 370 EEDGPLA 376
>sp|UL34_HCMVA|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 DADGPLA 10
+ DGPLA
Sbjct: 370 EEDGPLA 376
131|Sequence|651|660|DGPLARLKKA
>sp|VU54_HHV6Z|PROTEIN U54|Human herpesvirus 6B (strain Z29)
Query: 2 GPLARLK 8
GPL R+K
Sbjct: 132 GPLTRIK 138
>sp|VU54_HHV6U|PROTEIN U54|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 GPLARLK 8
GPL R+K
Sbjct: 132 GPLTRIK 138
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 3 PLARLKK 9
PLAR+K+
Sbjct: 27 PLARIKR 33
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 PLARLK 8
PLARLK
Sbjct: 1163 PLARLK 1168
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 2 GPLARL 7
GPLARL
Sbjct: 1539 GPLARL 1544
>sp|PG068_VARV|PROTEIN OPG068|Variola virus
Query: 1 DGPLARL 7
DG LARL
Sbjct: 464 DGQLARL 470
>sp|PG068_VAR67|PROTEIN OPG068|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 DGPLARL 7
DG LARL
Sbjct: 464 DGQLARL 470
>sp|PG068_VACCC|PROTEIN OPG068|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DGPLARL 7
DG LARL
Sbjct: 464 DGQLARL 470
>sp|PG068_MONPV|PROTEIN OPG068|Monkeypox virus (MPXV)
Query: 1 DGPLARL 7
DG LARL
Sbjct: 464 DGQLARL 470
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 GPLARL 7
GPLARL
Sbjct: 1566 GPLARL 1571
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 2 GPLARL 7
GPLARL
Sbjct: 1544 GPLARL 1549
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 DGPLARLKKA 10
DG +ARL A
Sbjct: 1816 DGEMARLAAA 1825
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 GPLARLKK 9
GP+ +LK+
Sbjct: 26 GPMIKLKR 33
132|Sequence|656|665|RLKKAIFSPE
>sp|VL1_HPV1|MAJOR capsid protein L1|Human papillomavirus type 1 (Human
Query: 4 KAIFSPE 10
KAIF+PE
Sbjct: 92 KAIFNPE 98
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 RLKKAIFS 8
R+KKA+F+
Sbjct: 514 RIKKAMFT 521
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 RLKKAIFS 8
R+KKA+F+
Sbjct: 514 RIKKAMFT 521
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 1 RLKKAIFSPE 10
+LK+ FSP+
Sbjct: 76 KLKRKYFSPK 85
>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60
Query: 2 LKKAIFSPE 10
+ +A+F+PE
Sbjct: 87 IDRAVFNPE 95
>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38
Query: 2 LKKAIFSPE 10
LK+ FSP+
Sbjct: 78 LKRKCFSPK 86
>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22
Query: 2 LKKAIFSPE 10
LK+ FSP+
Sbjct: 82 LKRKYFSPK 90
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 1 RLKKAIFSPE 10
RLK+ I PE
Sbjct: 139 RLKELISKPE 148
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 1 RLKKAIFSPE 10
RLK+ I PE
Sbjct: 139 RLKELISKPE 148
133|Sequence|661|670|IFSPELYENI
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 IFSPELYENI 10
I +PELY+ +
Sbjct: 114 ILAPELYDTL 123
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 IFSPELYEN 9
IF+PEL N
Sbjct: 910 IFAPELANN 918
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 FSPELYENI 10
FSP YE +
Sbjct: 293 FSPRRYETV 301
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 FSPELYENI 10
FSP YE +
Sbjct: 293 FSPRRYETV 301
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 FSPELYENI 10
FSP YE +
Sbjct: 293 FSPRRYETV 301
>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)
Query: 2 FSPELYENI 10
FSP YE +
Sbjct: 293 FSPRRYETV 301
>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)
Query: 2 FSPELYENI 10
FSP YE +
Sbjct: 293 FSPRRYETV 301
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 IFSPELY 7
+F+P+LY
Sbjct: 952 VFAPKLY 958
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 IFSPELY 7
+F+P+LY
Sbjct: 952 VFAPKLY 958
>sp|PG036_MONPV|PROTEIN OPG036|Monkeypox virus (MPXV)
Query: 1 IFSPELYENI 10
I+S LYEN+
Sbjct: 149 IYSYVLYENV 158
>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)
Query: 3 SPELYENI 10
SPE YE++
Sbjct: 681 SPEAYESL 688
>sp|MATRX_HENDH|MATRIX protein|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 FSPELYEN 9
FSP +EN
Sbjct: 19 FSPTSWEN 26
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 5 ELYENI 10
ELYEN+
Sbjct: 272 ELYENL 277
134|Sequence|666|675|LYENIAEWIV
>sp|NCAP_PI3H4|NUCLEOPROTEIN parainfluenza 3 virus (strain
Query: 1 LYENIAEWI 9
+YE EWI
Sbjct: 123 IYEKTTEWI 131
>sp|CVC2_EBVG|CAPSID vertex component 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 LYENIAEWI 9
LY NI +W+
Sbjct: 159 LYGNINQWV 167
>sp|CVC2_EBVB9|CAPSID vertex component 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LYENIAEWI 9
LY NI +W+
Sbjct: 159 LYGNINQWV 167
>sp|CVC2_EBVA8|CAPSID vertex component 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 LYENIAEWI 9
LY NI +W+
Sbjct: 159 LYGNINQWV 167
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 2 YENIAEWI 9
Y N+ EW+
Sbjct: 600 YRNLGEWV 607
>sp|PG077_VACCT|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain Tian Tan)
Query: 1 LYENIAEWI 9
YE+IAE++
Sbjct: 277 FYEDIAEFV 285
>sp|PG077_VACCC|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LYENIAEWI 9
YE+IAE++
Sbjct: 277 FYEDIAEFV 285
>sp|PG077_MONPZ|TELOMERE-BINDING protein OPG077|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 1 LYENIAEWI 9
YE+IAE++
Sbjct: 277 FYEDIAEFV 285
>sp|PG077_MONPV|TELOMERE-BINDING protein OPG077|Monkeypox virus (MPXV)
Query: 1 LYENIAEWI 9
YE+IAE++
Sbjct: 277 FYEDIAEFV 285
>sp|VP7_ROTHC|OUTER capsid glycoprotein VP7|Rotavirus C (isolate RVC/Human/United
Query: 3 ENIAEWIV 10
E IAEWI+
Sbjct: 158 EQIAEWIL 165
>sp|PG077_VAR67|TELOMERE-BINDING protein OPG077|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 LYENIAEWI 9
YE+IAE++
Sbjct: 277 FYEDIAEFV 285
>sp|VP7_ROTHE|OUTER capsid glycoprotein VP7|Rotavirus C (isolate
Query: 3 ENIAEWIV 10
E IAEWI+
Sbjct: 158 EQIAEWIL 165
>sp|TRX1_EBVB9|TRIPLEX capsid protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LYENIAEWIV 10
Y N+++W V
Sbjct: 353 FYSNVSDWEV 362
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 LYENIAEW 8
L N+AEW
Sbjct: 2525 LINNLAEW 2532
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 1 LYENIAE 7
LYEN+A+
Sbjct: 273 LYENLAD 279
>sp|NCAP_PI1HW|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 2 YENIAEWI 9
YE EW+
Sbjct: 127 YERTTEWL 134
>sp|NCAP_PI1HC|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 2 YENIAEWI 9
YE EW+
Sbjct: 127 YERTTEWL 134
>sp|NCAP_PI1HA|NUCLEOPROTEIN parainfluenza 1 virus (strains
Query: 2 YENIAEWI 9
YE EW+
Sbjct: 127 YERTTEWL 134
>sp|P100_HHV7J|LARGE structural phosphoprotein|Human herpesvirus 7 (strain JI)
Query: 1 LYENIAEWI 9
LY N+ WI
Sbjct: 58 LYNNLILWI 66
>sp|EBNA1_EBVG|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 YENIAE 7
+ENIAE
Sbjct: 478 FENIAE 483
>sp|EBNA1_EBVB9|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 YENIAE 7
+ENIAE
Sbjct: 478 FENIAE 483
>sp|EBNA1_EBVA8|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 YENIAE 7
+ENIAE
Sbjct: 478 FENIAE 483
>sp|TRX2_HHV2H|TRIPLEX capsid protein 2|Human herpesvirus 2 (strain HG52)
Query: 1 LYENIAEWI 9
LYE + W+
Sbjct: 271 LYEALVAWL 279
>sp|TRX2_HHV11|TRIPLEX capsid protein 2|Human herpesvirus 1 (strain 17)
Query: 1 LYENIAEWI 9
LYE + W+
Sbjct: 271 LYEALVAWL 279
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 LYENIAEWIV 10
L+E+ W+V
Sbjct: 795 LFESTCTWLV 804
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 LYENIAEWIV 10
L+E+ W+V
Sbjct: 795 LFESTCTWLV 804
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 LYENIAEWIV 10
L+E+ W+V
Sbjct: 795 LFESTCTWLV 804
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 LYENIAEWIV 10
L+E+ W+V
Sbjct: 795 LFESTCTWLV 804
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 LYENIAEWIV 10
L+E+ W+V
Sbjct: 795 LFESTCTWLV 804
>sp|RP30_MONPV|DNA-DIRECTED RNA polymerase 30 kDa|Monkeypox virus (MPXV)
Query: 3 ENIAEW 8
EN+ EW
Sbjct: 38 ENLIEW 43
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 LYENIAEWI 9
+Y+N+ +W+
Sbjct: 787 IYQNLRDWL 795
>sp|HEMA_I67A2|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1967
Query: 4 NIAEWIV 10
NIA WI+
Sbjct: 73 NIAGWIL 79
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 YENIAEWI 9
YE +WI
Sbjct: 138 YERYVDWI 145
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 YENIAEWI 9
YE +WI
Sbjct: 138 YERYVDWI 145
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 YENIAEWI 9
YE +WI
Sbjct: 138 YERYVDWI 145
>sp|HEMA_I45A0|HEMAGGLUTININ A virus (strain A/USA:Huston/AA/1945
Query: 4 NIAEWIV 10
NIA WI+
Sbjct: 73 NIAGWIL 79
>sp|HEMA_I54A2|HEMAGGLUTININ A virus (strain A/Malaysia:Malaya/302/1954
Query: 4 NIAEWIV 10
NIA WI+
Sbjct: 73 NIAGWIL 79
>sp|HEMA_I43A0|HEMAGGLUTININ A virus (strain A/USA:Iowa/1943
Query: 4 NIAEWIV 10
NIA WI+
Sbjct: 73 NIAGWIL 79
>sp|HEMA_I77AB|HEMAGGLUTININ A virus (strain A/USSR/90/1977
Query: 4 NIAEWIV 10
NIA WI+
Sbjct: 73 NIAGWIL 79
>sp|HEMA_I51A0|HEMAGGLUTININ A virus (strain A/USA:Albany/12/1951
Query: 4 NIAEWIV 10
NIA WI+
Sbjct: 73 NIAGWIL 79
>sp|HEMA_I40A0|HEMAGGLUTININ A virus (strain A/Hickox/1940
Query: 4 NIAEWIV 10
NIA WI+
Sbjct: 73 NIAGWIL 79
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 LYENIAEW 8
++EN +W
Sbjct: 2549 VFENFEDW 2556
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 1 LYENIAEW 8
+Y N+ W
Sbjct: 353 VYANVGRW 360
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 LYENIAEW 8
LY+ + +W
Sbjct: 2376 LYDEVKKW 2383
>sp|RAP94_MONPV|RNA polymerase-associated transcription-specificity factor
Query: 2 YENIAEWI 9
Y N+ +WI
Sbjct: 771 YVNVKQWI 778
135|Sequence|671|680|AEWIVAHWWA
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 2 EWIVAHWW 9
EW+ H W
Sbjct: 574 EWVYPHLW 581
>sp|PB2_I85A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 2 EWIVAHWWA 10
+WI+ +W A
Sbjct: 551 QWIIRNWEA 559
>sp|PB2_I59A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 2 EWIVAHWWA 10
+WI+ +W A
Sbjct: 551 QWIIRNWEA 559
>sp|PB2_I05A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 2 EWIVAHWWA 10
+WI+ +W A
Sbjct: 551 QWIIRNWEA 559
>sp|PB2_I56A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIKNW 557
>sp|PB2_I97A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I97A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I96A3|POLYMERASE basic protein 2|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I96A2|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I96A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I88A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/8/1988
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I83A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I83A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chile/1/1983
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I80AA|POLYMERASE basic protein 2|Influenza A virus (strain A/India/6263/1980
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I80A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/4/1980
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I80A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I79A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Kiev/59/1979
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I78A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/18/1978
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I78A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/2/1978
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I78A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Mallard/New
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I77AC|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I77AB|POLYMERASE basic protein 2|Influenza A virus (strain A/USSR/90/1977
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I77AA|POLYMERASE basic protein 2|Influenza A virus (strain A/Brazil/11/1978
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I77A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I76A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/110/1976
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I75A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Victoria/3/1975
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I75A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Beijing/39/1975
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I73A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Port
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I73A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/London/1416/1973
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I72A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/101/1972
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I72A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/102/1972
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I72A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Udorn/307/1972
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I71A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/1/1971
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I70A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Qu/7/1970
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I69A0|POLYMERASE basic protein 2|Influenza A virus (strain A/England/878/1969
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I68A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Northern
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I68A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Korea/426/1968
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I68A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I67A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I67A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Tokyo/3/1967
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I61A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I60A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Ann
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I57A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Singapore/1/1957
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I57A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I57A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I57A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/1957
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I57A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Japan/305/1957
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I54A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I51A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Albany/12/1951
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I47A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Fort
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I45A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I43A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Iowa/1943
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I40A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hickox/1940
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I36A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Henry/1936
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I35A3|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Phila/1935
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I34A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Puerto
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I33A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Wilson-Smith/1933
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I30A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I18A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Brevig
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I07A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I06A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I03A1|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I03A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I02A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I02A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I02A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I02A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 550 QWIIRNW 556
>sp|PB2_I02A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I02A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 545 QWIIRNW 551
>sp|PB2_I02A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Guinea
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 543 QWIIRNW 549
>sp|PB2_I02A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I01A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I01A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 215 QWIIRNW 221
>sp|PB2_I01A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 215 QWIIRNW 221
>sp|PB2_I01A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 544 QWIIRNW 550
>sp|PB2_I00A1|POLYMERASE basic protein 2|Influenza A virus (strain A/New
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I00A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Duck/Hong
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I000X|POLYMERASE basic protein 2|Influenza A virus (strain A/X-31
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|PB2_I000F|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Weybridge
Query: 2 EWIVAHW 8
+WI+ +W
Sbjct: 551 QWIIRNW 557
>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1
Query: 3 WIVAHW 8
W+ HW
Sbjct: 411 WLSGHW 416
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 1 AEWIVAHWW 9
EWI W+
Sbjct: 470 GEWIAVDWY 478
>sp|PB2_I93A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 2 EWIVAHW 8
+W++ +W
Sbjct: 551 QWVIRNW 557
>sp|US29_HCMVM|UNCHARACTERIZED protein US29|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 WIVAHWW 9
W+ + WW
Sbjct: 7 WLYSGWW 13
>sp|US29_HCMVA|UNCHARACTERIZED protein HHRF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 WIVAHWW 9
W+ + WW
Sbjct: 7 WLYSGWW 13
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 2 EWIVAHW 8
+W+V+ W
Sbjct: 70 KWLVSDW 76
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 2 EWIVAHW 8
+W+V+ W
Sbjct: 70 KWLVSDW 76
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 2 EWIVAHW 8
+W+V+ W
Sbjct: 70 KWLVSDW 76
>sp|NEC1_VZVD|NUCLEAR egress protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 IVAHWW 9
IVAH W
Sbjct: 269 IVAHVW 274
>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 AEWIVAH 7
A+W VAH
Sbjct: 210 ADWDVAH 216
>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 AEWIVAH 7
AEW V H
Sbjct: 212 AEWDVQH 218
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 3 WIVAHWWA 10
WIV WA
Sbjct: 488 WIVDRQWA 495
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 EWIVAHWWA 10
EWI W A
Sbjct: 1960 EWISGDWSA 1968
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 3 WIVAHWWA 10
W +++W++
Sbjct: 1259 WSISNWFS 1266
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 3 WIVAHWWA 10
WIV WA
Sbjct: 488 WIVDRQWA 495
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 WIVAHWWA 10
WIV WA
Sbjct: 488 WIVDRQWA 495
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 3 WIVAHWWA 10
WIV WA
Sbjct: 488 WIVDRQWA 495
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 3 WIVAHWWA 10
WIV WA
Sbjct: 488 WIVDRQWA 495
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 3 WIVAHWWA 10
WIV WA
Sbjct: 488 WIVDRQWA 495
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 3 WIVAHWWA 10
WIV WA
Sbjct: 488 WIVDRQWA 495
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 3 WIVAHWWA 10
WIV WA
Sbjct: 488 WIVDRQWA 495
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 WIVAHWWA 10
WIV WA
Sbjct: 488 WIVDRQWA 495
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 3 WIVAHWWA 10
WIV WA
Sbjct: 488 WIVDRQWA 495
136|Sequence|676|685|AHWWAVLLMG
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 WWAVLLM 9
WWAVL +
Sbjct: 770 WWAVLFL 776
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 WWAVLLM 9
WWAVL +
Sbjct: 771 WWAVLFL 777
>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus
Query: 3 WWAVLLMG 10
WWA+ ++G
Sbjct: 28 WWAIWVVG 35
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 AHWWAV 6
A WW V
Sbjct: 238 AAWWRV 243
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 AHWWA 5
A WWA
Sbjct: 1273 ACWWA 1277
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 AHWWA 5
A WWA
Sbjct: 1273 ACWWA 1277
137|Sequence|681|690|VLLMGIALIM
>sp|POLG_LIVSB|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/SB
Query: 2 LLMGIAL 8
LLMG+AL
Sbjct: 458 LLMGVAL 464
>sp|POLG_LIVNO|GENOME polyprotein|Louping ill virus (isolate Sheep
Query: 2 LLMGIAL 8
LLMG+AL
Sbjct: 458 LLMGVAL 464
>sp|POLG_LIVN1|GENOME polyprotein|Louping ill virus (strain Negishi
Query: 2 LLMGIAL 8
LLMG+AL
Sbjct: 458 LLMGVAL 464
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 LLMGIAL 8
LLMG+AL
Sbjct: 738 LLMGVAL 744
>sp|POLG_LIV31|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/31/1931)
Query: 2 LLMGIAL 8
LLMG+AL
Sbjct: 458 LLMGVAL 464
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 LLMGIAL 8
LLMG+AL
Sbjct: 738 LLMGVAL 744
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 LLMGIALI 9
+L+G+AL+
Sbjct: 737 MLLGVALV 744
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 LLMGIAL 8
LL+G+AL
Sbjct: 738 LLLGVAL 744
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 LLMGIAL 8
LL+G+AL
Sbjct: 738 LLLGVAL 744
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 LLMGIALI 9
+L+GIAL+
Sbjct: 2442 VLVGIALV 2449
138|Sequence|686|695|IALIMLMAGF
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 IALIMLMAG 9
IAL+ML G
Sbjct: 773 IALVMLATG 781
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 IALIMLMAG 9
IA+++L+AG
Sbjct: 372 IAILLLVAG 380
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 IALIMLMAG 9
IA+++L+AG
Sbjct: 372 IAILLLVAG 380
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 1 IALIMLMAG 9
IA+++L+AG
Sbjct: 372 IAILLLVAG 380
139|Sequence|691|700|LMAGFIKICS
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 4 GFIKICS 10
G+I ICS
Sbjct: 442 GYIDICS 448
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 AGFIKIC 9
+GF+K C
Sbjct: 558 SGFVKTC 564
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 AGFIKIC 9
+GF+K C
Sbjct: 558 SGFVKTC 564
>sp|RDRP_ROTHC|RNA-DIRECTED RNA polymerase|Rotavirus C (isolate RVC/Human/United
Query: 1 LMAGFIKICS 10
++GFIKI S
Sbjct: 881 FISGFIKIDS 890
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 4 GFIKIC 9
GF+K C
Sbjct: 559 GFVKTC 564
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 4 GFIKIC 9
GF+K C
Sbjct: 561 GFVKTC 566
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 4 GFIKIC 9
GF+K C
Sbjct: 560 GFVKTC 565
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 GFIKIC 9
GF+K C
Sbjct: 560 GFVKTC 565
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 GFIKIC 9
GF K+C
Sbjct: 559 GFTKVC 564
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 4 GFIKIC 9
GF K+C
Sbjct: 559 GFTKVC 564
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 4 GFIKIC 9
GF K+C
Sbjct: 559 GFTKVC 564
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 4 GFIKIC 9
GF K+C
Sbjct: 559 GFTKVC 564
>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1
Query: 3 AGFIKICS 10
AGF +CS
Sbjct: 552 AGFRALCS 559
>sp|J1L_HCMVA|UNCHARACTERIZED protein J1L|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LMAGFIKIC 9
++AG +++C
Sbjct: 156 VLAGCVRVC 164
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 MAGFIKICS 10
M G IK CS
Sbjct: 144 MGGEIKNCS 152
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 GFIKIC 9
GF+K C
Sbjct: 560 GFLKTC 565
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 LMAGFIKICS 10
LM G +CS
Sbjct: 264 LMVGAATVCS 273
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 1 LMAGFIKIC 9
+ +GFI +C
Sbjct: 1603 ISSGFIGLC 1611
140|Sequence|696|705|IKICSVHTPS
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 1 IKICSVHT 8
IK+C+ HT
Sbjct: 360 IKVCAKHT 367
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 KICSVHTPS 10
K C+ H PS
Sbjct: 1375 KCCTRHVPS 1383
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 KICSVHTPS 10
K C+ H PS
Sbjct: 1375 KCCTRHVPS 1383
>sp|PG195_VACCC|PROTEIN OPG195|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 CSVHTPS 10
CSVH P+
Sbjct: 50 CSVHLPT 56
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 KICSVHTPS 10
K C+ H PS
Sbjct: 1375 KCCTRHVPS 1383
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 KICSVHTPS 10
K C+ H PS
Sbjct: 1375 KCCTRHVPS 1383
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 KICSVHTPS 10
K C+ H PS
Sbjct: 1375 KCCTRHVPS 1383
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 4 CSVHTPS 10
C+VH PS
Sbjct: 1140 CAVHVPS 1146
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 4 CSVHTPS 10
C+VH PS
Sbjct: 1140 CAVHVPS 1146
>sp|PG195_MONPV|PROTEIN OPG195|Monkeypox virus (MPXV)
Query: 4 CSVHTPS 10
CSVH P+
Sbjct: 50 CSVHRPT 56
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 4 CSVHTPS 10
C+VH PS
Sbjct: 1141 CAVHVPS 1147
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 4 CSVHTPS 10
C+VH PS
Sbjct: 1140 CAVHVPS 1146
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 4 CSVHTPS 10
C+VH PS
Sbjct: 1141 CAVHVPS 1147
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 4 CSVHTPS 10
C+VH PS
Sbjct: 1140 CAVHVPS 1146
>sp|HEPA_HHV6Z|DNA helicase/primase complex-associated protein|Human herpesvirus 6B
Query: 1 IKICSVHT 8
+KIC HT
Sbjct: 182 VKICFSHT 189
>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A
Query: 1 IKICSVHT 8
+KIC HT
Sbjct: 182 VKICFSHT 189
>sp|VE4_HPV33|PROTEIN E4|Human papillomavirus 33
Query: 1 IKICSVHTP 9
++ CSV TP
Sbjct: 45 LQSCSVQTP 53
>sp|PG176_VACCC|PROTEIN OPG176|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 CSVHTP 9
C+V+TP
Sbjct: 74 CAVNTP 79
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 4 CSVHTPS 10
C +H+PS
Sbjct: 1130 CPIHSPS 1136
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 4 CSVHTPS 10
C +H+PS
Sbjct: 1130 CPIHSPS 1136
>sp|SCAF_HHV7J|CAPSID scaffolding protein|Human herpesvirus 7 (strain JI)
Query: 4 CSVHTPS 10
C+VH P
Sbjct: 258 CAVHAPD 264
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 4 CSVHTPS 10
C +H+PS
Sbjct: 1130 CPIHSPS 1136
>sp|UL133_HCMVM|PROTEIN UL133|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 CSVHTPS 10
C VH PS
Sbjct: 3 CDVHDPS 9
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 1 IKICSVH 7
+K C +H
Sbjct: 979 VKTCGIH 985
141|Sequence|701|710|VHTPSSNPKL
>sp|PKG3_ADE12|PACKAGING protein 3|Human adenovirus A serotype 12
Query: 1 VHTPSSNP 8
VH P+S P
Sbjct: 179 VHNPASKP 186
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 1 VHTPSSNPK 9
V+ PSS+PK
Sbjct: 274 VYDPSSSPK 282
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 VHTPSSNPK 9
V+ PSS+PK
Sbjct: 274 VYDPSSSPK 282
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 VHTPSSNPK 9
V+ PSS+PK
Sbjct: 274 VYDPSSSPK 282
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 TPSSNP 8
TPS+NP
Sbjct: 369 TPSTNP 374
>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 1 VHTPSSN 7
VH PS+N
Sbjct: 198 VHHPSTN 204
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 1 VHTPSSNPKL 10
+H P P+L
Sbjct: 1555 IHVPEDTPRL 1564
>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 VHTPSSN 7
VH PS+N
Sbjct: 198 VHHPSTN 204
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 1 VHTPSSNPKL 10
+H P P+L
Sbjct: 1555 IHVPEDTPRL 1564
>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern
Query: 1 VHTPSSN 7
VH PS+N
Sbjct: 198 VHHPSTN 204
>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 1 VHTPSSN 7
VH PS+N
Sbjct: 182 VHHPSTN 188
>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 1 VHTPSSN 7
VH PS+N
Sbjct: 182 VHHPSTN 188
>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971
Query: 1 VHTPSSN 7
VH PS+N
Sbjct: 198 VHHPSTN 204
>sp|US10_VZVD|VIRION protein US10 homolog|Varicella-zoster virus (strain Dumas)
Query: 1 VHTPSSNP 8
+H+PS P
Sbjct: 55 IHSPSERP 62
>sp|HEMA_I78A9|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 1 VHTPSSN 7
VH PS+N
Sbjct: 182 VHHPSTN 188
>sp|HEMA_I71A3|HEMAGGLUTININ A virus (strain A/Equine/Tokyo/1971
Query: 1 VHTPSSN 7
+H PS+N
Sbjct: 197 IHHPSTN 203
>sp|HEMA_I000X|HEMAGGLUTININ A virus (strain A/X-31
Query: 1 VHTPSSN 7
+H PS+N
Sbjct: 198 IHHPSTN 204
>sp|HEMA_I68A0|HEMAGGLUTININ A virus (strain A/Aichi/2/1968
Query: 1 VHTPSSN 7
+H PS+N
Sbjct: 198 IHHPSTN 204
>sp|U10_HHV6Z|PROTEIN U10|Human herpesvirus 6B (strain Z29)
Query: 5 SSNPKL 10
SSNPKL
Sbjct: 328 SSNPKL 333
>sp|U10_HHV6H|PROTEIN U10|Human herpesvirus 6B (HHV-6 variant
Query: 5 SSNPKL 10
SSNPKL
Sbjct: 328 SSNPKL 333
>sp|U10_HHV6U|U10 protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 SSNPKL 10
SSNPKL
Sbjct: 328 SSNPKL 333
>sp|US34_HCMVA|PROTEIN US34|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 HTPSSNPK 9
H P S PK
Sbjct: 115 HGPLSTPK 122
>sp|VIF_HV1N5|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 HTPSSNPKL 10
H S+NPK+
Sbjct: 43 HYESTNPKI 51
>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57
Query: 1 VHTPSS 6
VHTP S
Sbjct: 175 VHTPQS 180
>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a
Query: 1 VHTPSS 6
VHTP S
Sbjct: 175 VHTPQS 180
>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 TPSSNP 8
TPS+NP
Sbjct: 369 TPSTNP 374
>sp|SLFN_VACCC|SCHLAFEN-LIKE protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VHTPSSN 7
VHT SSN
Sbjct: 29 VHTHSSN 35
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 2 HTPSSNP 8
H PSS+P
Sbjct: 1598 HNPSSSP 1604
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 3 TPSSNPKL 10
+P+S+P+L
Sbjct: 428 SPASDPRL 435
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 3 TPSSNPKL 10
+P+S+P+L
Sbjct: 428 SPASDPRL 435
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 3 TPSSNPKL 10
+P+S+P+L
Sbjct: 428 SPASDPRL 435
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 2 HTPSSNP 8
H PSS+P
Sbjct: 1598 HNPSSSP 1604
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 3 TPSSNPKL 10
+P+S+P+L
Sbjct: 429 SPASDPRL 436
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 3 TPSSNPKL 10
+P+S+P+L
Sbjct: 429 SPASDPRL 436
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 1 VHTPSSNP 8
+H P S P
Sbjct: 558 IHAPGSGP 565
>sp|US34_HCMVM|PROTEIN US34|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 HTPSSNPK 9
H P S PK
Sbjct: 115 HGPLSTPK 122
>sp|PHOSP_HRSVB|PHOSPHOPROTEIN respiratory syncytial virus B
Query: 3 TPSSNP 8
TPS NP
Sbjct: 92 TPSDNP 97
142|Sequence|706|715|SNPKLPPPKP
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 3 PKLPPPK 9
PK PPPK
Sbjct: 689 PKTPPPK 695
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 3 PKLPPPK 9
PK PPPK
Sbjct: 685 PKTPPPK 691
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 6 PPPKP 10
PPPKP
Sbjct: 1224 PPPKP 1228
>sp|CEP1_HCMVM|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SNPKLPP 7
S PKLPP
Sbjct: 235 SPPKLPP 241
>sp|CEP1_HCMVA|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SNPKLPP 7
S PKLPP
Sbjct: 235 SPPKLPP 241
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 NPKLPPPKP 10
+ K PPP P
Sbjct: 2860 DTKAPPPPP 2868
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 1 SNPKLPPPKP 10
++PK PP P
Sbjct: 541 TDPKFPPTYP 550
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 1 SNPKLPPPKP 10
++PK PP P
Sbjct: 547 TDPKFPPTYP 556
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 2 NPKLPPPKP 10
NP LP KP
Sbjct: 1495 NPTLPVAKP 1503
>sp|US17_HCMVM|PROTEIN US17|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 6 PPPKP 10
PPP+P
Sbjct: 15 PPPRP 19
>sp|US17_HCMVA|UNCHARACTERIZED protein HVLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 PPPKP 10
PPP+P
Sbjct: 15 PPPRP 19
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 SNPKLPP 7
S P LPP
Sbjct: 1664 SRPNLPP 1670
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 2 NPKLPPPKP 10
NP LP KP
Sbjct: 1503 NPTLPITKP 1511
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 2 NPKLPPPKP 10
NP LP KP
Sbjct: 1494 NPTLPVAKP 1502
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 NPKLPPPKP 10
+PK PP P
Sbjct: 548 DPKFPPSYP 556
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 SNPKLPPPK 9
SNPK P K
Sbjct: 3334 SNPKTPKYK 3342
>sp|NRAM_INBLE|NEURAMINIDASE B virus (strain B/Lee/1940)
Query: 5 LPPPKP 10
PPP+P
Sbjct: 73 FPPPEP 78
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 SNPKLPPPK 9
SNPK P K
Sbjct: 3334 SNPKTPKYK 3342
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 5 LPPPKP 10
+PPP+P
Sbjct: 1745 IPPPRP 1750
>sp|VP2_ROTHC|INNER capsid protein VP2|Rotavirus C (isolate RVC/Human/United
Query: 3 PKLPP 7
PK+PP
Sbjct: 659 PKIPP 663
>sp|NCAP_EBOSU|NUCLEOPROTEIN ebolavirus (strain Human/Uganda/Gulu/2000) (SEBOV)
Query: 1 SNPKLPPPKP 10
+NP + PP P
Sbjct: 600 NNPTVAPPAP 609
>sp|E434_ADE40|EARLY E4 34 kDa protein|Human adenovirus F serotype 40
Query: 4 KLPPP 8
+LPPP
Sbjct: 19 RLPPP 23
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 3 PKLPPPKP 10
P+ PPP P
Sbjct: 96 PRNPPPDP 103
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 4 KLPPPK 9
K PPP+
Sbjct: 589 KYPPPR 594
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 KLPPPK 9
K PPP+
Sbjct: 589 KYPPPR 594
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 4 KLPPPK 9
K PPP+
Sbjct: 590 KYPPPR 595
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 6 PPPKP 10
PPP P
Sbjct: 627 PPPSP 631
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 KLPPPK 9
K PPP+
Sbjct: 590 KYPPPR 595
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 4 KLPPPK 9
K PPP+
Sbjct: 590 KYPPPR 595
>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P
Query: 1 SNPKLPPPKP 10
+NP + P+P
Sbjct: 75 ANPDVGTPRP 84
>sp|GAG_HTL1C|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 SNPKLPPP 8
S+P++PPP
Sbjct: 113 SDPQIPPP 120
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 SNPKLPPP 8
S+P++PPP
Sbjct: 113 SDPQIPPP 120
>sp|GAG_HTL1M|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 SNPKLPPP 8
S+P++PPP
Sbjct: 113 SDPQIPPP 120
>sp|GAG_HTL1A|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 SNPKLPPP 8
S+P++PPP
Sbjct: 113 SDPQIPPP 120
>sp|GAG_HTL1L|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 SNPKLPPP 8
S+P++PPP
Sbjct: 113 SDPQIPPP 120
>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 SNPKLPPP 8
S+P++PPP
Sbjct: 113 SDPQIPPP 120
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 SNPKLPPP 8
S+P++PPP
Sbjct: 113 SDPQIPPP 120
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 SNPKLPPP 8
S+P++PPP
Sbjct: 113 SDPQIPPP 120
>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 SNPKLPPP 8
S+P++PPP
Sbjct: 113 SDPQIPPP 120
>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 SNPKLPPP 8
S+P++PPP
Sbjct: 113 SDPQIPPP 120
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 PKLPPPKP 10
PK PP P
Sbjct: 2281 PKFPPALP 2288
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 3 PKLPPPKP 10
PK PP P
Sbjct: 2285 PKFPPALP 2292
>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)
Query: 1 SNPKLPPP 8
S+P LP P
Sbjct: 603 SDPTLPSP 610
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 3 PKLPPPKP 10
PK PP P
Sbjct: 2278 PKFPPALP 2285
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 SNPKLPPPKP 10
+ PK PP P
Sbjct: 2280 NRPKFPPALP 2289
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 4 KLPPPKP 10
+LPPP+P
Sbjct: 722 QLPPPQP 728
>sp|VCCL3_HHV8P|PROTEIN vCCL3|Human herpesvirus 8 type P
Query: 1 SNPKLPPPK 9
S+ +LPP K
Sbjct: 43 SSARLPPDK 51
143|Sequence|711|720|PPPKPLPGTL
>sp|US32_HCMVM|PROTEIN US32|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PPPKPLPG 8
PPP+ LPG
Sbjct: 129 PPPRNLPG 136
>sp|US32_HCMVA|UNCHARACTERIZED protein HHRF7|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PPPKPLPG 8
PPP+ LPG
Sbjct: 129 PPPRNLPG 136
>sp|UL61_HCMVA|UNCHARACTERIZED protein UL61|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PPPKPLPGT 9
PPP+P+PGT
Sbjct: 401 PPPRPMPGT 409
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 PKPLPGT 9
P+P+PGT
Sbjct: 2853 PRPMPGT 2859
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 PKPLPGT 9
P+P+PGT
Sbjct: 2853 PRPMPGT 2859
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 PKPLPGT 9
P+P+PGT
Sbjct: 2853 PRPMPGT 2859
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 PKPLPGT 9
P+P+PGT
Sbjct: 2853 PRPMPGT 2859
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PPKPLPGTL 10
PP LP TL
Sbjct: 610 PPHGLPSTL 618
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PPKPLPGTL 10
PP LP TL
Sbjct: 611 PPHGLPSTL 619
>sp|VIE1_HCMVT|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 PPPKPLPGTL 10
PP P+P T+
Sbjct: 403 PPESPVPATI 412
>sp|VIE1_HCMVA|IMMEDIATE early protein IE1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PPPKPLPGTL 10
PP P+P T+
Sbjct: 403 PPESPVPATI 412
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PPKPLPGTL 10
PP LP TL
Sbjct: 610 PPHGLPSTL 618
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PPKPLPGTL 10
PP LP TL
Sbjct: 610 PPHGLPSTL 618
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PPKPLPGTL 10
PP LP TL
Sbjct: 610 PPHGLPSTL 618
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PPKPLPGTL 10
PP LP TL
Sbjct: 610 PPHGLPSTL 618
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PPKPLPGTL 10
PP LP TL
Sbjct: 610 PPHGLPSTL 618
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PPKPLPGTL 10
PP LP TL
Sbjct: 604 PPHGLPSTL 612
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PPKPLPGTL 10
PP LP TL
Sbjct: 610 PPHGLPSTL 618
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PPKPLPGTL 10
PP LP TL
Sbjct: 610 PPHGLPSTL 618
>sp|VIE1_HCMVM|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PPPKPLPGTL 10
PP P+P T+
Sbjct: 403 PPESPVPATI 412
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 PPPKPLPG 8
PP P+PG
Sbjct: 739 PPGAPIPG 746
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 PPPKPLPG 8
PP P+PG
Sbjct: 739 PPGAPIPG 746
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 2 PPKPLP 7
PPKPLP
Sbjct: 471 PPKPLP 476
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 PKPLPGT 9
P+P PGT
Sbjct: 2851 PQPKPGT 2857
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 2 PPKPLP 7
PPKPLP
Sbjct: 471 PPKPLP 476
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 1 PPPKPLP 7
PPP P P
Sbjct: 50 PPPVPSP 56
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 1 PPPKPLP 7
PPP P P
Sbjct: 50 PPPVPSP 56
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 PKPLPGT 9
P+P PGT
Sbjct: 2851 PQPKPGT 2857
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 PKPLPGT 9
P+P PGT
Sbjct: 2851 PQPKPGT 2857
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 PKPLPGT 9
P+P PGT
Sbjct: 2851 PQPKPGT 2857
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 1 PPPKPLP 7
P KPLP
Sbjct: 1152 PDEKPLP 1158
>sp|U21_HHV6U|GLYCOPROTEIN U21|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PPPKPLPG 8
PP P PG
Sbjct: 20 PPICPAPG 27
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PPKPLPGTL 10
PP LP TL
Sbjct: 610 PPHGLPSTL 618
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PPKPLPGTL 10
PP LP TL
Sbjct: 589 PPHGLPATL 597
>sp|ICP22_HHV2|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (HHV-2) (Human
Query: 2 PPKPLPGT 9
PP PLPG+
Sbjct: 20 PPSPLPGS 27
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 PPPKPLPGT 9
PP P+P T
Sbjct: 719 PPGAPIPKT 727
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 1 PPPKPL 6
PP KP+
Sbjct: 1691 PPEKPM 1696
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 3 PKPLPGT 9
P P PGT
Sbjct: 2864 PPPPPGT 2870
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 PPKPLPGT 9
PP+P P T
Sbjct: 1790 PPQPAPRT 1797
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 PPPKPLPGT 9
PP P+P T
Sbjct: 714 PPGAPIPTT 722
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 3 PKPLPGTL 10
P P+PG L
Sbjct: 1125 PLPIPGYL 1132
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 1 PPPKPL 6
PP KP+
Sbjct: 1691 PPEKPM 1696
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 1 PPPKPL 6
PP KP+
Sbjct: 1691 PPEKPM 1696
>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin)
Query: 1 PPPKPLPGT 9
PP P P T
Sbjct: 25 PPTSPAPST 33
>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PPPKPLPGT 9
PP P P T
Sbjct: 25 PPTSPAPST 33
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 PPPKPLPGTL 10
PP P+P T+
Sbjct: 720 PPGGPVPETV 729
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 PPPKPLPGT 9
P P P P T
Sbjct: 751 PLPAPKPAT 759
Query: 2 PPKPLP 7
P KP+P
Sbjct: 291 PSKPIP 296
>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)
Query: 3 PKPLPG 8
P+P PG
Sbjct: 344 PRPAPG 349
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 PPPKPLP 7
PP PLP
Sbjct: 460 PPGGPLP 466
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 PPPKPLP 7
PP PLP
Sbjct: 460 PPGGPLP 466
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 2 PPKPLPG 8
PP P PG
Sbjct: 296 PPGPDPG 302
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 PPKPLPGT 9
PP P P T
Sbjct: 1798 PPHPAPRT 1805
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 2 PPKPLPG 8
PP LPG
Sbjct: 419 PPLNLPG 425
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 2 PPKPLPG 8
PP LPG
Sbjct: 419 PPLNLPG 425
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 PPKPLPG 8
PP P PG
Sbjct: 296 PPGPDPG 302
>sp|V_MEASY|NON-STRUCTURAL protein V|Measles virus (strain Yamagata-1) (MeV)
Query: 2 PPKPLPG 8
PP P PG
Sbjct: 213 PPPPDPG 219
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 PPKPLPGT 9
PP P P T
Sbjct: 1798 PPHPAPRT 1805
>sp|POLG_HAVLC|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PPKPLPGTL 10
PP LP TL
Sbjct: 114 PPHGLPSTL 122
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 PPPKPLPGTL 10
PP P+P ++
Sbjct: 716 PPGGPVPNSV 725
>sp|VGP_MABVO|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 PPPKPLPGT 9
P P P PGT
Sbjct: 296 PTPSPQPGT 304
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 3 PKPLPG 8
P+P PG
Sbjct: 2886 PEPAPG 2891
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 PPPKPLP 7
PP P+P
Sbjct: 719 PPGAPIP 725
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PPPKPLPG 8
P P P+P
Sbjct: 214 PSPGPMPA 221
>sp|CAPSD_HASV8|CAPSID polyprotein VP90|Human astrovirus-8 (HAstV-8)
Query: 3 PKPLPG 8
P P+PG
Sbjct: 500 PSPIPG 505
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 PPPKPLPGT 9
PP P+P +
Sbjct: 714 PPGAPVPNS 722
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 2 PPKPLPG 8
PP P P
Sbjct: 624 PPSPTPA 630
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 PPPKPLP 7
PP PLP
Sbjct: 460 PPGGPLP 466
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PPPKPLPG 8
P P PLP
Sbjct: 219 PIPGPLPA 226
>sp|V_MEASI|NON-STRUCTURAL protein V|Measles virus (strain IP-3-Ca) (MeV)
Query: 2 PPKPLPG 8
PP P PG
Sbjct: 213 PPPPDPG 219
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 PPPKPLP 7
P P P+P
Sbjct: 271 PEPSPMP 277
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 PPPKPLPGT 9
PPP PGT
Sbjct: 277 PPPSQQPGT 285
144|Sequence|716|725|LPGTLKRRRP
>sp|ICP22_HHV2|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (HHV-2) (Human
Query: 1 LPGTLKRRRP 10
LPG+ KRRRP
Sbjct: 24 LPGSRKRRRP 33
>sp|ICP22_HHV2H|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (strain HG52)
Query: 2 PGTLKRRRP 10
PG+ KRRRP
Sbjct: 25 PGSRKRRRP 33
>sp|NP1_HBOC3|NON-STRUCTURAL protein NP-1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 2 PGTLKRRRP 10
PG +R+RP
Sbjct: 19 PGRDERKRP 27
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 GTLKRRR 9
GTL RRR
Sbjct: 33 GTLARRR 39
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 4 TLKRRRP 10
T+K RRP
Sbjct: 871 TMKERRP 877
>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65
Query: 3 GTLKRRR 9
GTLKR+R
Sbjct: 488 GTLKRKR 494
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 TLKRRRP 10
T+K RRP
Sbjct: 871 TMKERRP 877
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 4 TLKRRRP 10
T+K RRP
Sbjct: 863 TMKERRP 869
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 4 TLKRRRP 10
T+K RRP
Sbjct: 871 TMKERRP 877
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 4 TLKRRRP 10
T+K RRP
Sbjct: 871 TMKERRP 877
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 4 TLKRRRP 10
T+K RRP
Sbjct: 871 TMKERRP 877
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 4 TLKRRRP 10
T+K RRP
Sbjct: 871 TMKERRP 877
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 4 TLKRRRP 10
T+K RRP
Sbjct: 871 TMKERRP 877
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 4 TLKRRRP 10
T+K RRP
Sbjct: 871 TMKERRP 877
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 2 PGTLKRR 8
PGTLK +
Sbjct: 2244 PGTLKEK 2250
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 LPGTLKR 7
+PGTLK+
Sbjct: 878 VPGTLKK 884
>sp|75K_PAVHV|UNCHARACTERIZED protein 7.5K|Human parvovirus B19 (strain HV)
Query: 2 PGTLKRR 8
PGTLK R
Sbjct: 44 PGTLKPR 50
>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4
Query: 3 GTLKRRR 9
G+LKR+R
Sbjct: 488 GSLKRKR 494
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 LPGTLKRR 8
+PG LK+R
Sbjct: 1339 IPGKLKKR 1346
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 LPGTLKRR 8
+PG LK+R
Sbjct: 1366 IPGKLKKR 1373
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 LPGTLKRR 8
+PG LK+R
Sbjct: 1344 IPGKLKKR 1351
>sp|AN_HCMVM|ALKALINE nuclease|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 GTLKRRRP 10
TLKR RP
Sbjct: 343 ATLKRARP 350
>sp|AN_HCMVA|ALKALINE nuclease|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 GTLKRRRP 10
TLKR RP
Sbjct: 343 ATLKRARP 350
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 4 TLKRRRP 10
T+K++RP
Sbjct: 1885 TIKQKRP 1891
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 4 TLKRRRP 10
T+K++RP
Sbjct: 1885 TIKQKRP 1891
145|Sequence|721|730|KRRRPPQPIQ
>sp|VL1_HPV41|MAJOR capsid protein L1|Human papillomavirus type 41
Query: 5 PPQPIQ 10
PPQPIQ
Sbjct: 35 PPQPIQ 40
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 2 RRRPPQPI 9
+R+P QPI
Sbjct: 471 KRKPDQPI 478
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 5 PPQPIQ 10
PP PIQ
Sbjct: 52 PPVPIQ 57
>sp|VIF_HV1YB|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 KRRRPPQP 8
K+RRPP P
Sbjct: 157 KKRRPPLP 164
>sp|VIF_HV1S2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 KRRRPPQP 8
KRR+PP P
Sbjct: 157 KRRKPPLP 164
>sp|VIF_HV1S9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 KRRRPPQP 8
KRR+PP P
Sbjct: 157 KRRKPPLP 164
>sp|VE2_HPV52|REGULATORY protein E2|Human papillomavirus 52
Query: 1 KRRRP 5
KRRRP
Sbjct: 237 KRRRP 241
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 RRPPQP 8
R PPQP
Sbjct: 1788 RNPPQP 1793
>sp|VIF_HV1YF|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 KRRRPPQP 8
K+R+PP P
Sbjct: 157 KKRKPPLP 164
>sp|NS1_I02A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 3 RRPPQPIQ 10
RRPP P +
Sbjct: 210 RRPPLPTK 217
>sp|VE2_HPV33|REGULATORY protein E2|Human papillomavirus 33
Query: 1 KRRRP 5
KRRRP
Sbjct: 226 KRRRP 230
>sp|VIF_HV1SE|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 KRRRPPQP 8
KR RPP P
Sbjct: 157 KRSRPPLP 164
>sp|ICP27_VZVO|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Oka
Query: 1 KRRRPPQP 8
+RRRP P
Sbjct: 140 RRRRPTTP 147
>sp|ICP27_VZVD|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Dumas)
Query: 1 KRRRPPQP 8
+RRRP P
Sbjct: 140 RRRRPTTP 147
>sp|PKG1_ADE02|PACKAGING protein 1|Human adenovirus C serotype 2
Query: 2 RRRPPQP 8
+R+PPQP
Sbjct: 63 QRKPPQP 69
>sp|PKG1_ADE05|PACKAGING protein 1|Human adenovirus C serotype 5
Query: 2 RRRPPQP 8
+R+PPQP
Sbjct: 63 QRKPPQP 69
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 4 RPPQP 8
RPP+P
Sbjct: 2281 RPPRP 2285
>sp|VL1_HPV1|MAJOR capsid protein L1|Human papillomavirus type 1 (Human
Query: 5 PPQPI 9
PPQPI
Sbjct: 20 PPQPI 24
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 3 RRPPQP 8
RRPP P
Sbjct: 37 RRPPSP 42
>sp|PG130_MONPV|39KDA core protein OPG130|Monkeypox virus (MPXV)
Query: 3 RRPPQPIQ 10
R+P QP+Q
Sbjct: 66 RQPTQPLQ 73
>sp|J1S_HCMVA|UNCHARACTERIZED protein J1S|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 KRRRPPQPIQ 10
+RRRPP Q
Sbjct: 155 RRRRPPHHTQ 164
>sp|J1L_HCMVA|UNCHARACTERIZED protein J1L|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 KRRRPPQPIQ 10
+RRRPP Q
Sbjct: 272 RRRRPPHHTQ 281
146|Sequence|726|735|PQPIQQPQRQ
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 QPIQQPQRQ 10
QP++QP +
Sbjct: 764 QPLEQPTSE 772
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 QPIQQPQRQ 10
QP++QP +
Sbjct: 764 QPLEQPTSE 772
>sp|PG097_MONPV|PROTEIN OPG097|Monkeypox virus (MPXV)
Query: 1 PQPIQQPQR 9
PQP Q P++
Sbjct: 42 PQPNQPPRQ 50
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 1 PQPIQQP 7
P PI+QP
Sbjct: 109 PHPIEQP 115
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 3 PIQQPQ 8
P+QQPQ
Sbjct: 157 PVQQPQ 162
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 1 PQPIQQP 7
P P++QP
Sbjct: 109 PHPVEQP 115
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 QPIQQPQRQ 10
QPIQ P+++
Sbjct: 829 QPIQLPEKE 837
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 QPIQQPQRQ 10
QPIQ P+++
Sbjct: 826 QPIQLPEKE 834
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PQPIQQP 7
P P+ QP
Sbjct: 121 PHPVDQP 127
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 QPIQQPQRQ 10
QPIQ P+++
Sbjct: 826 QPIQLPEKE 834
147|Sequence|731|740|QPQRQRPRES
>sp|VE2_HPV39|REGULATORY protein E2|Human papillomavirus 39
Query: 2 PQRQRPRE 9
P R+RPR+
Sbjct: 244 PSRKRPRQ 251
>sp|AN_VZVD|ALKALINE nuclease|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 QPQRQRPRE 9
QPQ RP E
Sbjct: 101 QPQEPRPEE 109
>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea
Query: 2 PQRQRPRE 9
PQR+R R+
Sbjct: 335 PQRERRRK 342
>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 PQRQRPRE 9
PQR+R R+
Sbjct: 337 PQRERRRK 344
>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky
Query: 2 PQRQRPRE 9
PQR+R R+
Sbjct: 337 PQRERRRK 344
>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 PQRQRPRE 9
PQR+R R+
Sbjct: 329 PQRERRRK 336
>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 PQRQRPRE 9
PQR+R R+
Sbjct: 337 PQRERRRK 344
>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 PQRQRPRE 9
PQR+R R+
Sbjct: 337 PQRERRRK 344
>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 PQRQRPRE 9
PQR+R R+
Sbjct: 326 PQRERRRK 333
>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 2 PQRQRPRE 9
PQR+R R+
Sbjct: 337 PQRERRRK 344
>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005
Query: 2 PQRQRPRE 9
PQR+R R+
Sbjct: 337 PQRERRRK 344
>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky
Query: 2 PQRQRPRE 9
PQR+R R+
Sbjct: 326 PQRERRRK 333
>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 PQRQRPRE 9
PQR+R R+
Sbjct: 337 PQRERRRK 344
>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996
Query: 2 PQRQRPRE 9
PQR+R R+
Sbjct: 337 PQRERRRK 344
>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 PQRQRPRE 9
PQR+R R+
Sbjct: 326 PQRERRRK 333
>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 PQRQRPRE 9
PQR+R R+
Sbjct: 337 PQRERRRK 344
>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 PQRQRPRE 9
PQR+R R+
Sbjct: 326 PQRERRRK 333
>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 PQRQRPRE 9
PQR+R R+
Sbjct: 337 PQRERRRK 344
>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003
Query: 2 PQRQRPRE 9
PQR+R R+
Sbjct: 337 PQRERRRK 344
>sp|NCAP_HMPVC|NUCLEOPROTEIN metapneumovirus (strain CAN97-83) (HMPV)
Query: 2 PQRQRP 7
PQ QRP
Sbjct: 147 PQNQRP 152
>sp|VE8E2_HPV39|PROTEIN E8^E2C|Human papillomavirus 39
Query: 2 PQRQRPRE 9
P R+RPR+
Sbjct: 49 PSRKRPRQ 56
148|Sequence|736|748|RPRESYQMGHMRR
>sp|VIF_HV1U4|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 RPRESYQMGH 10
RPR YQ GH
Sbjct: 130 RPRCEYQAGH 139
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 RPRESYQMGHM 11
RP YQMG +
Sbjct: 1503 RPSGKYQMGEL 1513
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 RPRESYQMGHM 11
RP YQMG +
Sbjct: 1503 RPSGKYQMGEL 1513
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 RPRESYQMGHM 11
RP YQMG +
Sbjct: 1503 RPSGKYQMGEL 1513
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 RPRESYQMGHMR 12
RP +GH+R
Sbjct: 450 RPTRGNSLGHLR 461
>sp|VIF_HV1MP|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 PRESYQMGH 10
PR +YQ GH
Sbjct: 132 PRCNYQAGH 140
>sp|VIF_HV1M2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 PRESYQMGH 10
PR +YQ GH
Sbjct: 132 PRCNYQAGH 140
>sp|VIF_HV193|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 PRESYQMGH 10
PR +YQ GH
Sbjct: 131 PRCNYQAGH 139
>sp|VIF_HV1S2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 PRESYQMGH 10
PR YQ GH
Sbjct: 131 PRCDYQAGH 139
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 4 ESYQMGHM 11
ESYQ+G++
Sbjct: 1229 ESYQVGYL 1236
>sp|VIF_HV1VI|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 PRESYQMGHMR 12
PR +YQ GH +
Sbjct: 131 PRCNYQAGHNK 141
>sp|VIF_HV1ET|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 PRESYQMGH 10
PR YQ GH
Sbjct: 131 PRCDYQAGH 139
>sp|VIF_HV1S9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 PRESYQMGH 10
PR YQ GH
Sbjct: 131 PRCDYQAGH 139
>sp|VIF_HV1JR|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 PRESYQMGHMR 12
PR YQ GH +
Sbjct: 131 PRCEYQAGHSK 141
>sp|VIF_HV1MA|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 PRESYQMGH 10
PR YQ GH
Sbjct: 131 PRCDYQAGH 139
>sp|VIF_HV1N5|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 PRESYQMGHMR 12
PR YQ GH +
Sbjct: 131 PRCEYQAGHNK 141
>sp|VIF_HV197|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 PRESYQMGHMR 12
PR YQ GH +
Sbjct: 131 PRCEYQAGHTQ 141
>sp|VIF_HV1A2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 PRESYQMGHMR 12
PR YQ GH +
Sbjct: 131 PRCEYQAGHNK 141
>sp|VIF_HV1Y2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 PRESYQMGH 10
PR YQ GH
Sbjct: 131 PRCEYQAGH 139
>sp|VIF_HV1NA|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 PRESYQMGH 10
PR YQ GH
Sbjct: 131 PRCEYQAGH 139
>sp|VIF_HV1B5|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 PRESYQMGH 10
PR YQ GH
Sbjct: 131 PRCEYQAGH 139
>sp|VIF_HV1SE|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 PRESYQMGH 10
PR YQ GH
Sbjct: 131 PRCEYQAGH 139
>sp|VIF_HV1H2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 PRESYQMGH 10
PR YQ GH
Sbjct: 131 PRCEYQAGH 139
>sp|VIF_HV1BR|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 PRESYQMGH 10
PR YQ GH
Sbjct: 131 PRCEYQAGH 139
>sp|VIF_HV1B1|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 PRESYQMGH 10
PR YQ GH
Sbjct: 131 PRCEYQAGH 139
>sp|VIF_HV112|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 PRESYQMGH 10
PR YQ GH
Sbjct: 131 PRCEYQAGH 139
>sp|VIF_HV1RH|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 PRESYQMGHMR 12
PR YQ GH +
Sbjct: 131 PRCEYQAGHNK 141
>sp|VIF_HV1EL|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 PRESYQMGH 10
PR YQ GH
Sbjct: 131 PRCEYQAGH 139
>sp|GM_HHV8P|ENVELOPE glycoprotein M|Human herpesvirus 8 type P
Query: 2 PRESYQMGH 10
PR YQ H
Sbjct: 378 PRTQYQSDH 386
>sp|VIF_HV190|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 RPRESYQMGH 10
RPR +Y GH
Sbjct: 130 RPRCNYPAGH 139
>sp|PG003_VACCC|TRUNCATED Ankyrin repeat protein OPG003|Vaccinia virus (strain Copenhagen)
Query: 4 ESYQMGHM 11
E Y+MG M
Sbjct: 34 EMYEMGEM 41
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 2 PRESYQMGHMRR 13
P+ GH+RR
Sbjct: 1208 PQHQMPQGHIRR 1219
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 4 ESYQMGHM 11
+SYQ+G++
Sbjct: 1225 QSYQVGYL 1232
>sp|TEG7_HHV11|TEGUMENT protein UL51|Human herpesvirus 1 (strain 17)
Query: 1 RPRESYQM 8
RP E Y+M
Sbjct: 14 RPEEQYEM 21
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 ESYQMGHM 11
+SYQ+G++
Sbjct: 1227 QSYQVGYL 1234
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 2 PRESYQMGHMRR 13
P+ GH+RR
Sbjct: 1208 PQHQMPRGHIRR 1219
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 ESYQMGHM 11
+SYQ+G++
Sbjct: 1227 QSYQVGYL 1234
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 2 PRESYQMGHMRR 13
P+ GH+RR
Sbjct: 1208 PQHQMPRGHIRR 1219
>sp|ICP27_EBVB9|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain B95-8)
Query: 5 SYQMGHMRR 13
SY GH RR
Sbjct: 121 SYTRGHKRR 129
>sp|ICP27_EBVG|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 SYQMGHMRR 13
SY GH RR
Sbjct: 121 SYTRGHKRR 129
>sp|ICP27_EBVA8|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain AG876)
Query: 5 SYQMGHMRR 13
SY GH RR
Sbjct: 121 SYTRGHKRR 129
>sp|P100_HHV6U|LARGE structural phosphoprotein|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 ESYQMGHMRR 13
+++ GH+RR
Sbjct: 225 QNHLSGHLRR 234
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 6 YQMGHMRR 13
+ +GH+RR
Sbjct: 1077 FLIGHLRR 1084